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id
int64
age_years
int64
sex
string
under_5
int64
pregnant
int64
rural
int64
transmission_intensity
string
itn_ownership
int64
itn_use_last_night
int64
net_type
string
irs_sprayed
int64
insecticide_resistance_area
int64
iptp_doses
int64
smc_received
int64
malaria_vaccine
int64
plasmodium_species
string
fever
int64
temperature_c
float64
duration_fever_days
int64
parasite_density_per_ul
int64
severe_malaria
int64
cerebral_malaria
int64
severe_anaemia
int64
respiratory_distress
int64
hypoglycaemia
int64
renal_failure
int64
jaundice
int64
haemoglobin_g_dl
float64
rdt_performed
int64
rdt_result
string
microscopy_performed
int64
microscopy_result
string
clinical_diagnosis_only
int64
act_prescribed
int64
act_type
string
iv_artesunate_given
int64
rectal_artesunate_prereferral
int64
quinine_given
int64
blood_transfusion
int64
referred
int64
treatment_delay_hours
int64
act_completed_3_days
int64
kelch13_mutation
int64
outcome
string
day_28_recurrence
int64
hospital_days
int64
1
31
F
0
0
1
low
0
0
none
0
1
0
0
0
p_falciparum
1
39.6
5
4,746
0
0
0
0
0
0
0
8.8
1
positive
0
not_done
0
1
ASAQ
0
0
0
0
0
14
1
0
survived
0
0
2
2
M
1
0
1
high
0
0
none
0
0
0
0
0
p_falciparum
1
38.7
1
2,189
0
0
0
0
0
0
0
12
1
positive
0
not_done
0
1
DHA_PIP
0
0
0
0
0
16
1
0
survived
0
0
3
4
F
1
0
1
moderate
0
0
none
0
1
0
0
0
p_falciparum
1
39.8
4
1,843
0
0
0
0
0
0
0
11.7
1
positive
0
not_done
0
1
AL
0
0
0
0
0
7
1
0
survived
0
0
4
0
M
1
0
1
moderate
0
0
none
0
1
0
0
0
p_falciparum
1
38.4
5
6,932
0
0
0
0
0
0
0
10.5
1
positive
0
not_done
0
1
AL
0
0
0
0
0
2
1
0
survived
0
0
5
52
F
0
0
1
low
0
0
none
0
1
0
0
0
p_falciparum
1
38.5
1
100
0
0
0
0
0
0
0
11
1
positive
0
not_done
0
1
ASAQ
0
0
0
0
0
14
1
0
survived
0
0
6
4
M
1
0
1
high
1
1
pbo_net
0
0
0
0
0
p_falciparum
1
37.3
2
17,816
1
0
1
0
0
0
0
4.2
1
positive
0
not_done
0
0
none
0
0
0
0
1
19
0
0
died
0
17
7
3
M
1
0
1
moderate
0
0
none
1
0
0
0
0
p_falciparum
1
40.9
5
12,216
0
0
0
0
0
0
0
12.4
1
positive
0
not_done
0
1
DHA_PIP
0
0
0
0
0
3
1
0
survived
0
0
8
31
F
0
0
1
high
0
0
none
0
1
0
0
0
p_falciparum
1
39
7
804
0
0
0
0
0
0
0
13.9
1
positive
0
not_done
0
1
DHA_PIP
0
0
0
0
0
4
1
0
survived
0
0
9
4
M
1
0
1
moderate
1
1
pbo_net
0
1
0
0
0
p_falciparum
1
38.8
1
6,949
0
0
0
0
0
0
0
9.8
1
positive
0
not_done
0
0
none
0
0
0
0
0
12
0
0
survived
0
0
10
5
F
0
0
1
high
1
0
pbo_net
0
0
0
0
0
p_falciparum
1
39.1
1
2,610
0
0
0
0
0
0
0
6.2
1
positive
0
not_done
0
0
none
0
0
0
0
0
25
0
0
survived
0
0
11
0
F
1
0
1
high
1
0
pbo_net
1
1
0
0
0
p_falciparum
1
38.6
9
22,274
0
0
0
0
0
0
0
10.2
1
positive
0
not_done
0
1
AL
0
0
0
0
0
2
1
0
survived
0
0
12
11
F
0
0
0
high
1
1
standard_pyrethroid
0
1
0
0
0
p_falciparum
1
39.1
1
89,725
0
0
0
0
0
0
0
11.5
1
positive
0
not_done
0
0
none
0
0
0
0
0
27
0
0
survived
0
0
13
11
M
0
0
1
moderate
0
0
none
0
1
0
0
0
p_falciparum
1
38.4
1
5,365
0
0
0
0
0
0
0
7.4
1
positive
0
not_done
0
1
ASAQ
0
0
0
0
0
4
0
0
survived
0
0
14
12
F
0
0
1
moderate
0
0
none
0
1
0
0
0
p_falciparum
1
39.6
9
3,542
0
0
0
0
0
0
0
12
1
positive
0
not_done
0
0
none
0
0
0
0
0
2
0
0
survived
0
0
15
9
F
0
0
0
high
0
0
none
1
0
0
0
0
p_falciparum
1
39.4
3
17,518
0
0
0
0
0
0
0
11.3
1
positive
0
not_done
0
0
none
0
0
0
0
0
1
0
0
survived
0
0
16
34
M
0
0
0
moderate
1
0
pbo_net
0
1
0
0
0
p_falciparum
1
39.2
9
574
0
0
0
0
0
0
0
13.5
1
negative
0
not_done
0
1
AL
0
0
0
0
0
7
0
0
survived
1
0
17
70
M
0
0
1
moderate
1
1
pbo_net
0
1
0
0
0
p_falciparum
1
39.3
2
324
0
0
0
0
0
0
0
10.6
1
positive
0
not_done
0
1
ASPY
0
0
0
0
0
12
1
0
survived
1
0
18
3
M
1
0
0
high
0
0
none
0
1
0
1
1
p_falciparum
1
37.3
4
2,866
0
0
0
0
0
0
0
9.9
1
positive
0
not_done
0
1
AL
0
0
0
0
0
9
1
0
survived
0
0
19
55
F
0
0
1
high
0
0
none
0
0
0
0
0
p_falciparum
1
39.3
12
342
0
0
0
0
0
0
0
9.3
1
negative
0
not_done
0
1
ASAQ
0
0
0
0
0
40
1
0
survived
0
0
20
6
F
0
0
1
low
1
1
standard_pyrethroid
0
1
0
0
0
p_falciparum
1
39.9
1
1,584
0
0
0
0
0
0
0
11.1
1
positive
0
not_done
0
1
AL
0
0
0
0
0
1
1
0
survived
0
0
21
10
F
0
0
1
high
0
0
none
0
1
0
0
0
p_falciparum
1
39
6
11,836
0
0
0
0
0
0
0
10.4
1
positive
0
not_done
0
1
DHA_PIP
0
0
0
0
0
7
1
0
survived
0
0
22
3
M
1
0
1
high
0
0
none
1
0
0
0
0
p_falciparum
1
37.3
2
3,674
0
0
0
0
0
0
0
11.4
1
positive
0
not_done
0
1
AL
0
0
0
0
0
21
1
0
survived
0
0
23
2
F
1
0
1
moderate
0
0
none
1
1
0
0
0
p_falciparum
1
39.1
4
1,765
0
0
0
0
0
0
0
9.6
1
positive
0
not_done
0
1
AL
0
0
0
0
0
22
1
0
survived
0
0
24
13
F
0
0
1
moderate
1
1
pbo_net
0
0
0
0
0
p_falciparum
1
40.8
8
1,927
0
0
0
0
0
0
0
8.4
1
positive
0
not_done
0
1
AL
0
0
0
0
0
10
0
0
survived
0
0
25
1
F
1
0
1
high
0
0
none
1
1
0
0
0
mixed
1
40
2
19,532
0
0
0
0
0
0
0
8.2
1
positive
0
not_done
0
1
ASAQ
0
0
0
0
0
8
1
0
survived
0
0
26
40
M
0
0
1
moderate
1
1
standard_pyrethroid
0
1
0
0
0
mixed
1
37
1
1,246
0
0
0
0
0
0
0
9.2
1
negative
0
not_done
0
1
AL
0
0
0
0
0
21
1
0
survived
0
0
27
31
F
0
0
0
high
1
1
dual_ai_net
1
1
0
0
0
p_falciparum
1
38.3
4
123,059
0
0
0
0
0
0
0
5.7
1
positive
0
not_done
0
1
ASAQ
0
0
0
0
0
3
1
0
survived
0
0
28
3
F
1
0
0
low
1
1
standard_pyrethroid
0
0
0
0
0
p_falciparum
1
38.4
1
786
0
0
0
0
0
0
0
8.3
1
positive
0
not_done
0
1
ASAQ
0
0
0
0
0
4
1
0
survived
0
0
29
1
M
1
0
1
low
0
0
none
0
1
0
0
0
p_falciparum
1
39.6
1
26,888
0
0
0
0
0
0
0
11.3
1
positive
0
not_done
0
1
ASPY
0
0
0
0
0
5
0
0
survived
0
0
30
13
M
0
0
1
low
0
0
none
0
1
0
0
0
p_malariae
1
38
4
264
0
0
0
0
0
0
0
10.1
1
positive
0
not_done
0
1
AL
0
0
0
0
0
1
1
0
survived
0
0
31
1
M
1
0
1
low
1
1
standard_pyrethroid
0
1
0
0
0
p_falciparum
1
39.9
1
126
0
0
0
0
0
0
0
13.4
1
negative
0
not_done
0
1
AL
0
0
0
0
0
8
1
1
survived
0
0
32
2
M
1
0
1
high
0
0
none
0
1
0
0
0
p_falciparum
1
40.6
1
5,042
0
0
0
0
0
0
0
10.5
0
not_done
0
not_done
1
1
ASAQ
0
0
0
0
0
5
0
0
survived
0
0
33
2
M
1
0
1
high
1
1
standard_pyrethroid
0
0
0
0
0
p_falciparum
1
38.8
1
1,334
0
0
0
0
0
0
0
10.6
0
not_done
0
not_done
1
1
AL
0
0
0
0
0
23
1
0
survived
0
0
34
9
M
0
0
1
moderate
1
0
pbo_net
1
1
0
0
0
p_falciparum
1
38.8
7
551
0
0
0
0
0
0
0
11.3
1
positive
0
not_done
0
1
ASPY
0
0
0
0
0
19
1
1
survived
0
0
35
4
F
1
0
1
moderate
1
0
standard_pyrethroid
0
0
0
0
0
p_falciparum
1
36.9
4
3,323
0
0
0
0
0
0
0
12.9
1
positive
0
not_done
0
1
AL
0
0
0
0
0
25
0
0
survived
0
0
36
17
M
0
0
0
high
0
0
none
0
1
0
0
0
p_falciparum
1
39.7
2
59,593
0
0
0
0
0
0
0
9.5
1
positive
0
not_done
0
1
AL
0
0
0
0
0
5
1
0
survived
0
0
37
2
F
1
0
1
high
1
1
standard_pyrethroid
0
1
0
0
0
p_falciparum
1
36.8
2
6,656
0
0
0
0
0
0
0
10.4
0
not_done
0
not_done
1
0
none
0
0
0
0
0
16
0
0
survived
0
0
38
3
M
1
0
1
high
0
0
none
0
1
0
1
0
p_falciparum
1
38.1
8
24,160
0
0
0
0
0
0
0
11.3
1
positive
0
not_done
0
1
DHA_PIP
0
0
0
0
0
4
0
0
survived
0
0
39
3
M
1
0
1
moderate
0
0
none
0
1
0
0
0
p_falciparum
1
38.5
4
3,832
0
0
0
0
0
0
0
10.2
1
positive
0
not_done
0
1
AL
0
0
0
0
0
4
1
0
survived
0
0
40
2
F
1
0
1
high
1
1
dual_ai_net
0
0
0
0
0
p_falciparum
1
36
2
100
0
0
0
0
0
0
0
11.4
0
not_done
0
not_done
1
1
AL
0
0
0
0
0
1
0
0
survived
0
0
41
1
M
1
0
1
high
0
0
none
0
1
0
0
0
p_falciparum
1
39
8
1,585
0
0
0
0
0
0
0
12.7
1
positive
0
not_done
0
1
ASPY
0
0
0
0
0
10
1
0
survived
1
0
42
4
F
1
0
1
low
0
0
none
0
1
0
0
0
p_falciparum
1
38.7
4
2,884
0
0
0
0
0
0
0
10.8
1
positive
0
not_done
0
1
AL
0
0
0
0
0
1
1
0
survived
0
0
43
22
M
0
0
1
moderate
0
0
none
0
0
0
0
0
p_falciparum
1
38.5
2
5,469
0
0
0
0
0
0
0
11.3
1
positive
0
not_done
0
0
none
0
0
0
0
0
11
0
0
survived
0
0
44
0
F
1
0
1
moderate
1
1
dual_ai_net
0
1
0
0
0
p_falciparum
1
39.8
1
3,726
0
0
0
0
0
0
0
8.8
0
not_done
0
not_done
1
0
none
0
0
0
0
0
14
0
0
survived
0
0
45
20
F
0
0
1
moderate
1
1
pbo_net
0
1
0
0
0
p_falciparum
1
38.2
1
561
0
0
0
0
0
0
0
13.4
1
positive
0
not_done
0
1
AL
0
0
0
0
0
5
1
0
survived
0
0
46
3
M
1
0
0
high
0
0
none
0
1
0
0
0
p_falciparum
1
38.8
3
13,940
0
0
0
0
0
0
0
13
1
positive
0
not_done
0
0
none
0
0
0
0
0
4
0
0
survived
0
0
47
1
M
1
0
0
moderate
0
0
none
0
1
0
0
0
p_falciparum
1
38.6
1
3,591
1
1
0
1
1
0
0
10.5
1
positive
0
not_done
0
0
none
0
1
0
0
0
2
0
0
survived
0
6
48
11
F
0
0
1
high
0
0
none
0
0
0
0
0
p_falciparum
1
40.5
6
250
0
0
0
0
0
0
0
10.5
1
positive
0
not_done
0
1
AL
0
0
0
0
0
4
1
0
survived
0
0
49
4
F
1
0
0
low
1
1
pbo_net
0
0
0
0
0
p_falciparum
1
40.6
1
605
0
0
0
0
0
0
0
6.7
1
positive
0
not_done
0
1
DHA_PIP
0
0
0
0
0
5
1
0
survived
0
0
50
8
F
0
0
1
high
1
0
pbo_net
0
0
0
0
0
p_falciparum
1
38.5
1
352,399
0
0
0
0
0
0
0
8
1
positive
0
not_done
0
1
AL
0
0
0
0
0
11
1
0
survived
0
0
51
1
M
1
0
1
moderate
1
0
dual_ai_net
1
1
0
0
0
p_falciparum
1
40.1
3
25,315
0
0
0
0
0
0
0
12.1
1
positive
0
not_done
0
1
DHA_PIP
0
0
0
0
0
12
0
0
survived
0
0
52
5
F
0
0
1
high
0
0
none
1
1
0
0
0
p_falciparum
1
40.1
4
222,263
0
0
0
0
0
0
0
12.6
1
negative
0
not_done
0
0
none
0
0
0
0
0
6
0
0
survived
0
0
53
8
F
0
0
1
high
1
1
standard_pyrethroid
0
0
0
0
0
p_falciparum
1
38.4
5
8,083
0
0
0
0
0
0
0
11.8
1
positive
0
not_done
0
1
DHA_PIP
0
0
0
0
0
7
0
0
survived
1
0
54
26
F
0
1
1
low
1
1
standard_pyrethroid
0
1
0
0
0
p_falciparum
1
39
2
579
0
0
0
0
0
0
0
11
0
not_done
0
not_done
1
0
none
0
0
0
0
0
6
0
0
survived
0
0
55
60
M
0
0
0
high
0
0
none
0
0
0
0
0
p_falciparum
1
38.5
1
44,020
0
0
0
0
0
0
0
11.3
1
positive
0
not_done
0
1
AL
0
0
0
0
0
14
1
0
survived
0
0
56
8
M
0
0
1
moderate
1
1
standard_pyrethroid
0
1
0
0
0
p_malariae
1
39.2
5
6,729
0
0
0
0
0
0
0
15.9
1
positive
0
not_done
0
1
AL
0
0
0
0
0
32
0
0
survived
1
0
57
28
F
0
1
0
moderate
1
1
pbo_net
0
1
2
0
0
p_falciparum
1
38.4
1
193
0
0
0
0
0
0
0
9.7
1
negative
0
not_done
0
1
DHA_PIP
0
0
0
0
0
3
0
0
survived
0
0
58
1
F
1
0
1
moderate
0
0
none
0
0
0
0
0
p_falciparum
1
37
3
23,666
1
0
1
0
0
0
0
7.4
1
positive
0
not_done
0
0
none
0
0
1
0
0
32
0
0
survived
0
1
59
4
M
1
0
1
low
0
0
none
0
1
0
0
0
p_falciparum
1
40.1
2
308
0
0
0
0
0
0
0
12.5
0
not_done
0
not_done
1
1
ASAQ
0
0
0
0
0
13
1
0
survived
0
0
60
0
M
1
0
1
high
0
0
none
0
1
0
0
0
p_falciparum
1
36
1
78,826
0
0
0
0
0
0
0
11.2
1
positive
0
not_done
0
1
AL
0
0
0
0
0
24
1
0
survived
0
0
61
32
F
0
0
1
low
0
0
none
0
0
0
0
0
p_falciparum
0
37.9
2
3,918
0
0
0
0
0
0
0
7.9
1
positive
0
not_done
0
1
AL
0
0
0
0
0
2
1
0
survived
0
0
62
3
F
1
0
1
high
1
1
dual_ai_net
0
0
0
1
0
p_falciparum
1
39
1
9,590
0
0
0
0
0
0
0
8.4
1
positive
0
not_done
0
1
ASAQ
0
0
0
0
0
17
1
0
survived
0
0
63
1
M
1
0
1
moderate
1
1
standard_pyrethroid
0
1
0
0
0
p_falciparum
1
38.1
2
1,902
0
0
0
0
0
0
0
8
1
positive
0
not_done
0
0
none
0
0
0
0
0
13
0
0
survived
0
0
64
2
M
1
0
1
high
0
0
none
0
0
0
1
0
p_falciparum
1
37.9
8
6,184
0
0
0
0
0
0
0
11
1
positive
0
not_done
0
0
none
0
0
0
0
0
3
0
0
survived
0
0
65
1
M
1
0
0
high
0
0
none
0
1
0
1
0
p_falciparum
1
38.9
5
1,209
0
0
0
0
0
0
0
9.2
0
not_done
0
not_done
1
1
AL
0
0
0
0
0
39
1
0
survived
0
0
66
19
M
0
0
1
moderate
0
0
none
1
1
0
0
0
p_falciparum
1
38.1
2
231
0
0
0
0
0
0
0
12.4
1
positive
0
not_done
0
1
DHA_PIP
0
0
0
0
0
10
1
0
survived
0
0
67
42
F
0
0
1
high
1
1
standard_pyrethroid
0
0
0
0
0
p_falciparum
1
39.1
3
9,245
0
0
0
0
0
0
0
9.1
1
positive
0
not_done
0
1
AL
0
0
0
0
0
1
1
0
survived
0
0
68
48
F
0
0
0
high
1
0
standard_pyrethroid
0
0
0
0
0
p_falciparum
1
39.9
5
60,125
0
0
0
0
0
0
0
10.1
1
positive
0
not_done
0
1
AL
0
0
0
0
0
1
1
0
survived
0
0
69
4
F
1
0
1
moderate
0
0
none
0
1
0
0
0
p_malariae
1
38.9
6
536
0
0
0
0
0
0
0
14.1
0
not_done
0
not_done
1
1
AL
0
0
0
0
0
91
1
0
survived
0
0
70
67
F
0
0
1
moderate
1
1
pbo_net
0
1
0
0
0
p_falciparum
1
38.3
1
1,128
0
0
0
0
0
0
0
9.4
1
positive
0
not_done
0
0
none
0
0
0
0
0
1
0
0
survived
0
0
71
47
F
0
0
1
moderate
0
0
none
0
1
0
0
0
p_falciparum
0
38.3
5
100
0
0
0
0
0
0
0
14.3
1
positive
0
not_done
0
1
DHA_PIP
0
0
0
0
0
39
1
0
survived
0
0
72
66
F
0
0
1
high
1
1
standard_pyrethroid
1
0
0
0
0
p_falciparum
1
37.9
2
11,445
0
0
0
0
0
0
0
10.3
1
positive
0
not_done
0
1
AL
0
0
0
0
0
4
1
0
survived
0
0
73
3
F
1
0
1
moderate
0
0
none
1
0
0
0
0
p_falciparum
1
38.2
4
1,270
0
0
0
0
0
0
0
11.8
1
positive
0
not_done
0
1
AL
0
0
0
0
0
7
1
0
survived
0
0
74
1
M
1
0
1
high
0
0
none
0
0
0
0
0
p_falciparum
1
39.9
2
836
0
0
0
0
0
0
0
8.3
1
positive
0
not_done
0
1
AL
0
0
0
0
0
71
1
0
survived
0
0
75
2
M
1
0
1
high
0
0
none
0
1
0
0
0
p_malariae
1
38.8
1
5,707
0
0
0
0
0
0
0
10.7
1
positive
0
not_done
0
1
ASAQ
0
0
0
0
0
2
0
0
survived
0
0
76
1
M
1
0
1
low
0
0
none
0
0
0
0
0
p_vivax
1
39.4
5
2,536
0
0
0
0
0
0
0
13.6
0
not_done
0
not_done
1
0
none
0
0
0
0
0
31
0
0
survived
0
0
77
3
F
1
0
1
moderate
1
0
standard_pyrethroid
0
1
0
0
0
p_falciparum
1
36.8
14
521
1
0
1
0
0
0
0
9.8
1
positive
0
not_done
0
0
none
0
1
0
0
1
17
0
0
survived
0
1
78
28
F
0
1
1
low
0
0
none
0
1
4
0
0
p_falciparum
1
37.7
3
2,740
0
0
0
0
0
0
0
13.4
1
positive
0
not_done
0
1
ASAQ
0
0
0
0
0
1
1
0
survived
0
0
79
20
M
0
0
1
moderate
1
1
standard_pyrethroid
0
1
0
0
0
p_falciparum
1
38.2
1
8,357
1
0
0
0
0
0
1
9.6
0
not_done
0
not_done
1
0
none
0
0
0
0
1
9
0
0
survived
0
3
80
12
M
0
0
1
high
0
0
none
0
1
0
0
0
p_falciparum
1
38.2
1
49,315
0
0
0
0
0
0
0
7.1
1
negative
0
not_done
0
1
AL
0
0
0
0
0
4
1
0
survived
0
0
81
44
F
0
0
1
high
0
0
none
0
1
0
0
0
p_falciparum
1
39
1
2,997
0
0
0
0
0
0
0
8.5
1
negative
0
not_done
0
1
AL
0
0
0
0
0
21
1
0
survived
0
0
82
1
M
1
0
1
high
1
1
standard_pyrethroid
1
0
0
0
0
p_falciparum
1
40.4
3
13,693
0
0
0
0
0
0
0
10.6
1
positive
0
not_done
0
1
AL
0
0
0
0
0
9
1
0
survived
0
0
83
4
F
1
0
1
moderate
0
0
none
0
0
0
0
1
p_falciparum
1
39.1
1
19,314
1
0
0
0
0
0
0
14.1
1
positive
0
not_done
0
0
none
0
1
0
0
1
22
0
0
survived
0
8
84
11
F
0
0
1
moderate
0
0
none
0
1
0
0
0
p_falciparum
1
38.3
5
1,427
0
0
0
0
0
0
0
9.7
1
positive
0
not_done
0
1
AL
0
0
0
0
0
49
1
0
survived
0
0
85
11
F
0
0
1
high
0
0
none
0
1
0
0
0
p_falciparum
1
41.5
6
11,041
0
0
0
0
0
0
0
9.5
1
positive
0
not_done
0
1
ASPY
0
0
0
0
0
5
1
0
survived
0
0
86
8
M
0
0
0
high
1
1
standard_pyrethroid
0
1
0
0
0
p_falciparum
1
38.8
1
188
0
0
0
0
0
0
0
11.3
1
positive
0
not_done
0
1
ASPY
0
0
0
0
0
12
1
0
survived
0
0
87
33
F
0
0
0
moderate
1
0
standard_pyrethroid
0
0
0
0
0
p_falciparum
1
39.6
1
1,385
0
0
0
0
0
0
0
8.4
1
positive
0
not_done
0
1
AL
0
0
0
0
0
2
1
0
survived
0
0
88
4
F
1
0
1
high
0
0
none
0
1
0
0
0
p_falciparum
1
39.2
1
11,978
0
0
0
0
0
0
0
9.7
0
not_done
0
not_done
1
1
AL
0
0
0
0
0
1
1
0
survived
0
0
89
72
F
0
0
1
high
0
0
none
0
1
0
0
0
p_falciparum
1
39.5
1
1,378
0
0
0
0
0
0
0
11.7
1
positive
0
not_done
0
1
AL
0
0
0
0
0
2
1
0
survived
0
0
90
6
F
0
0
1
high
0
0
none
0
1
0
0
0
p_falciparum
1
38.5
1
18,536
0
0
0
0
0
0
0
11.5
1
positive
0
not_done
0
1
AL
0
0
0
0
0
13
1
0
survived
0
0
91
4
M
1
0
1
high
1
1
standard_pyrethroid
0
1
0
1
0
p_falciparum
1
38.3
8
11,820
0
0
0
0
0
0
0
12.7
1
positive
0
not_done
0
1
AL
0
0
0
0
0
11
1
0
survived
0
0
92
8
M
0
0
0
moderate
0
0
none
0
0
0
0
0
p_falciparum
1
38
10
4,613
0
0
0
0
0
0
0
11.7
0
not_done
0
not_done
1
1
AL
0
0
0
0
0
12
1
0
survived
0
0
93
64
M
0
0
1
low
0
0
none
0
1
0
0
0
p_falciparum
1
37.2
1
927
0
0
0
0
0
0
0
8.4
1
positive
0
not_done
0
1
AL
0
0
0
0
0
3
1
0
survived
0
0
94
66
M
0
0
1
high
1
1
standard_pyrethroid
0
1
0
0
0
p_falciparum
1
37.7
4
53,298
0
0
0
0
0
0
0
4.4
1
positive
0
not_done
0
1
AL
0
0
0
0
0
3
1
0
survived
0
0
95
20
M
0
0
1
high
1
1
pbo_net
0
0
0
0
0
p_falciparum
1
38
1
5,689
0
0
0
0
0
0
0
8.7
1
positive
0
not_done
0
1
ASAQ
0
0
0
0
0
11
1
0
survived
0
0
96
4
M
1
0
0
moderate
0
0
none
0
1
0
0
0
p_falciparum
1
40.1
3
3,222
0
0
0
0
0
0
0
11.5
0
not_done
0
not_done
1
1
AL
0
0
0
0
0
26
0
0
survived
1
0
97
1
F
1
0
1
moderate
1
1
pbo_net
0
1
0
0
0
mixed
1
38.1
1
10,583
0
0
0
0
0
0
0
11.7
1
positive
0
not_done
0
1
AL
0
0
0
0
0
58
1
0
survived
0
0
98
34
F
0
0
1
high
1
1
pbo_net
1
0
0
0
0
p_falciparum
1
38.7
1
5,202
0
0
0
0
0
0
0
11.5
1
positive
0
not_done
0
1
DHA_PIP
0
0
0
0
0
15
1
0
survived
0
0
99
6
M
0
0
0
low
1
1
pbo_net
0
1
0
0
0
p_falciparum
1
38.2
3
539
0
0
0
0
0
0
0
11.1
1
positive
0
not_done
0
1
ASAQ
0
0
0
0
0
6
1
0
survived
0
0
100
3
F
1
0
1
moderate
0
0
none
0
1
0
0
0
p_falciparum
1
36.9
1
38,452
1
1
1
0
0
0
0
8.5
1
positive
0
not_done
0
0
none
0
1
0
0
1
13
0
0
died
0
4
End of preview. Expand in Data Studio

Malaria Case Management & Insecticide Resistance Dataset

Abstract

This dataset provides 30,000 simulated malaria case records (10,000 per scenario) from sub-Saharan Africa. Each record contains 50+ variables including demographics, prevention (ITN, IRS, SMC, vaccine), clinical features (species, parasitaemia, severity, complications), diagnosis (RDT, microscopy), treatment (ACT, IV artesunate), insecticide resistance context, and outcomes. Three settings: tertiary hospital (0.6% mortality), district health centre (1.9%), and community level (2.9%).

1. Introduction

Malaria remains the leading cause of morbidity and mortality in sub-Saharan Africa, with 263 million cases and 597,000 deaths in 2023 (WHO World Malaria Report 2024). The WHO African Region accounts for 94% of cases and 95% of deaths. Children under 5 bear ~80% of the mortality burden. P. falciparum causes >99% of cases in SSA. Pyrethroid insecticide resistance is now detected in >60% of malaria-endemic areas, and partial artemisinin resistance (kelch13 mutations) has emerged in East Africa.

This dataset is entirely simulated. It must not be used for clinical decision-making.

2. Methodology

2.1 Parameterization

Parameter Value Source
Global cases (2023) 263M WHO WMR 2024
Deaths (2023) 597K WHO WMR 2024
African Region share 94% cases, 95% deaths WHO WMR 2024
P. falciparum (SSA) >99% WHO 2024
RDTs distributed (2022) 345M WHO 2023
ACT courses (2022) 242M WHO 2023
IPTp coverage ~45% MMV 2025
Pyrethroid resistance >60% areas WHO 2024
kelch13 mutations (E. Africa) Emerging (~5%) MMV 2025
ITN averted cases (2000-2015) 663M (68%) Bhatt et al., Nature 2015

2.2 Scenario Design

Scenario Facility IV Artesunate Microscopy Mortality
Tertiary hospital Teaching hospital Yes Yes 0.6%
District health centre Health centre No No 1.9%
Community level CHW / iCCM No No 2.9%

3. Schema

Column Type Description
id int Unique identifier
age_years int Patient age
sex categorical M / F
under_5 binary Under 5 years
pregnant binary Pregnant
rural binary Rural residence
transmission_intensity categorical high / moderate / low
itn_ownership binary ITN ownership
itn_use_last_night binary Slept under ITN
net_type categorical standard_pyrethroid / pbo_net / dual_ai_net / none
irs_sprayed binary IRS in household
insecticide_resistance_area binary Pyrethroid resistance area
iptp_doses int IPTp doses (pregnant women)
smc_received binary SMC received
malaria_vaccine binary RTS,S or R21 vaccine
plasmodium_species categorical p_falciparum / p_vivax / p_malariae / p_ovale / mixed
fever binary Fever present
temperature_c float Temperature (°C)
duration_fever_days int Fever duration
parasite_density_per_ul int Parasite density
severe_malaria binary Severe malaria
cerebral_malaria binary Cerebral malaria
severe_anaemia binary Severe malarial anaemia
respiratory_distress binary Respiratory distress
hypoglycaemia binary Hypoglycaemia
renal_failure binary Renal failure
jaundice binary Jaundice
haemoglobin_g_dl float Haemoglobin (g/dL)
rdt_performed binary RDT done
rdt_result categorical positive / negative / not_done
microscopy_performed binary Microscopy done
microscopy_result categorical positive / negative / not_done
clinical_diagnosis_only binary Clinical diagnosis only
act_prescribed binary ACT prescribed
act_type categorical AL / ASAQ / DHA_PIP / ASPY / none
iv_artesunate_given binary IV artesunate
rectal_artesunate_prereferral binary Rectal artesunate pre-referral
quinine_given binary Quinine given
blood_transfusion binary Blood transfusion
referred binary Referred to higher level
treatment_delay_hours int Treatment delay (hours)
act_completed_3_days binary Completed 3-day ACT course
kelch13_mutation binary kelch13 resistance marker
outcome categorical survived / died
day_28_recurrence binary Day 28 recurrence
hospital_days int Hospital stay (days)

4. Validation

Validation Report

Key validation checks:

  • Mortality gradient: 0.6% → 1.9% → 2.9% across settings ✓
  • P. falciparum: >91% of cases ✓
  • Under-5 burden: 45% of cases, higher severity ✓
  • RDT performance: ~85% tested ✓
  • ITN use gradient: 41% → 32% → 20% ✓
  • Severe malaria: ~10% with cerebral/anaemia complications ✓

5. Usage

from datasets import load_dataset
dataset = load_dataset("electricsheepafrica/malaria-case-management", "district_health_centre")
df = dataset["train"].to_pandas()
python generate_dataset.py --all-scenarios --n 10000 --seed 42

6. Limitations

  • Simulated: Not derived from real malaria surveillance data.
  • No geospatial: No GPS, transmission zone, or seasonality data.
  • No entomological: No mosquito species or biting rate data.
  • Snapshot: No longitudinal follow-up beyond day 28 recurrence.
  • No cost: No treatment cost or economic burden data.

7. References

  1. WHO (2024). World Malaria Report 2024.
  2. Bhatt S, et al. (2015). Coverage and effectiveness of malaria control in Africa. Nature, 526:207.
  3. WHO (2024). Malaria fact sheet.
  4. MMV (2025). Malaria facts & statistics.
  5. WHO (2024). Insecticide resistance in malaria vectors.
  6. UNICEF (2024). Malaria in Africa.
  7. WHO (2024). RTS,S and R21 malaria vaccine recommendations.

Citation

@dataset{esa_malaria_2025,
  title={Malaria Case Management and Insecticide Resistance Dataset},
  author={Electric Sheep Africa},
  year={2025},
  publisher={Hugging Face},
  url={https://huggingface.co/datasets/electricsheepafrica/malaria-case-management}
}

License

CC-BY-4.0

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