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entropic-digital
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cystic-fibrosis.ex1.eff

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chrom
stringclasses
2 values
pos
int64
302
159M
id
stringlengths
1
28
ref
stringlengths
1
194
alt
stringlengths
1
2.67k
qual
stringclasses
1 value
filter
stringclasses
1 value
info
stringlengths
20
1.04M
format
stringclasses
1 value
samples
listlengths
17
17
source_file
stringclasses
1 value
7
16,487
.
G
T
.
.
AC=9;AN=9;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.16487G>T||||||
GT
[ "1|1", ".", ".", ".", ".", "1|1", ".", ".", ".", ".", ".", "1|.", ".", "1|1", "1|1", ".", "." ]
ex1.eff.vcf
7
16,671
.
T
C
.
.
AC=2;AN=2;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.16671T>C||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1|.", "1|.", ".", ".", ".", "." ]
ex1.eff.vcf
7
16,692
.
G
C
.
.
AC=6;AN=6;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.16692G>C||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1|.", "1|1", ".", "1|.", "1/1", "." ]
ex1.eff.vcf
7
16,712
.
T
G
.
.
AC=1;AN=2;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.16712T>G||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "0|1", ".", ".", ".", "." ]
ex1.eff.vcf
7
16,717
.
CTG
ATA
.
.
AC=1;AN=1;ANN=ATA|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.16717_16719delCTGinsATA||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".|1", ".", ".", ".", "." ]
ex1.eff.vcf
7
16,719
.
G
A
.
.
AC=2;AN=2;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.16719G>A||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/1", "." ]
ex1.eff.vcf
7
16,787
.
AAATCCG
A
.
.
AC=1;AN=2;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.16788_16793delAATCCG||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1|0", "." ]
ex1.eff.vcf
7
16,798
.
T
C
.
.
AC=1;AN=2;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.16798T>C||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1|0", "." ]
ex1.eff.vcf
7
16,878
.
A
T
.
.
AC=1;AN=1;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.16878A>T||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".|1", "." ]
ex1.eff.vcf
7
17,881
.
T
TCAA
.
.
AC=2;AN=2;ANN=TCAA|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.17881_17882insCAA||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/1", ".", ".", "." ]
ex1.eff.vcf
7
18,510
.
G
T
.
.
AC=3;AN=3;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.18510G>T||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/1", "1/.", ".", ".", "." ]
ex1.eff.vcf
7
19,181
.
C
T
.
.
AC=25;AN=32;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.19181C>T||||||
GT
[ "1/1", "1/0", "1/0", "1/0", "1/0", "1/1", "1/1", "1/1", ".", "1/1", "1/1", "1/1", "1/0", "1/0", "1/1", "1/0", "1/1" ]
ex1.eff.vcf
7
20,170
.
A
G
.
.
AC=4;AN=4;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.20170A>G||||||
GT
[ ".", ".", ".", ".", ".", "1|.", ".", ".", "1|.", "1|.", ".", ".", ".", "1|.", ".", ".", "." ]
ex1.eff.vcf
7
20,248
.
GTT
GAT
.
.
AC=1;AN=1;ANN=GAT|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.20249T>A||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", "1|.", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
20,249
.
T
A
.
.
AC=1;AN=1;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.20249T>A||||||
GT
[ ".", ".", ".", ".", ".", ".", "1|.", ".", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
20,273
.
G
A
.
.
AC=10;AN=10;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.20273G>A||||||
GT
[ ".", ".", "1/1", ".", ".", ".", "1|1", "1|1", ".", ".", ".", ".", ".", ".", "1/1", "1/1", "." ]
ex1.eff.vcf
7
20,284
.
A
G
.
.
AC=11;AN=11;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.20284A>G||||||
GT
[ ".", ".", "1/1", ".", ".", ".", "1|1", "1|1", ".", ".", ".", ".", "1/.", ".", "1/1", "1/1", "." ]
ex1.eff.vcf
7
20,289
.
A
C
.
.
AC=12;AN=12;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.20289A>C||||||
GT
[ ".", ".", "1/1", ".", ".", ".", "1|1", "1|1", ".", ".", ".", ".", "1/1", ".", "1/1", "1/1", "." ]
ex1.eff.vcf
7
20,301
.
T
C
.
.
AC=3;AN=3;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.20301T>C||||||
GT
[ ".", ".", "1/.", ".", ".", ".", "1|.", ".", ".", ".", ".", ".", ".", ".", ".", "1/.", "." ]
ex1.eff.vcf
7
20,469
.
CAC
TAT
.
.
AC=3;AN=3;ANN=TAT|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.20469_20471delCACinsTAT||||||
GT
[ ".", ".", ".", ".", ".", "1|1", ".", ".", "1|.", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
20,490
.
C
T
.
.
AC=1;AN=2;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.20490C>T||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", "1/0", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
20,546
.
T
G
.
.
AC=2;AN=2;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.20546T>G||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1|1", ".", "." ]
ex1.eff.vcf
7
20,556
.
C
G
.
.
AC=2;AN=2;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.20556C>G||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1|1", ".", "." ]
ex1.eff.vcf
7
21,248
.
A
C
.
.
AC=2;AN=2;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.21248A>C||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/1", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
21,946
.
C
T
.
.
AC=33;AN=34;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.21946C>T||||||
GT
[ "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/0", "1/1", "1/1", "1/1", "1/1" ]
ex1.eff.vcf
7
22,105
.
G
C
.
.
AC=11;AN=13;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.22105G>C||||||
GT
[ ".", ".", "1/0", "1/1", ".", ".", ".", ".", "1/1", ".", "1/1", "1/1", ".", ".", "1/0", "1/.", "." ]
ex1.eff.vcf
7
22,729
.
C
G
.
.
AC=7;AN=14;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.22729C>G||||||
GT
[ ".", ".", ".", ".", "1/0", ".", "1/0", ".", "1/0", "1|0", "1/0", ".", ".", "1/0", "1/0", ".", "." ]
ex1.eff.vcf
7
23,213
.
T
C
.
.
AC=1;AN=2;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.23213T>C||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", "1/0", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
23,856
.
G
C
.
.
AC=1;AN=2;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.23856G>C||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/0", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
24,125
.
G
A
.
.
AC=1;AN=1;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.24125G>A||||||
GT
[ ".", ".", ".", "1/.", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
24,499
.
T
C
.
.
AC=1;AN=1;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.24499T>C||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1|.", ".", "." ]
ex1.eff.vcf
7
24,600
.
GT
TG
.
.
AC=1;AN=2;ANN=TG|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.24600_24601delGTinsTG||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/0", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
25,801
.
G
T
.
.
AC=24;AN=24;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.25801G>T||||||
GT
[ "1/1", ".", ".", ".", "1|1", "1/1", "1/1", "1/1", "1/1", "1/1", "1|.", "1/1", "1/.", "1/1", "1/1", "1/1", "." ]
ex1.eff.vcf
7
26,456
.
G
A
.
.
AC=1;AN=2;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.26456G>A||||||
GT
[ ".", ".", ".", ".", ".", ".", "1|0", ".", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
26,469
.
C
A
.
.
AC=1;AN=2;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.26469C>A||||||
GT
[ ".", ".", ".", ".", ".", ".", "1|0", ".", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
26,726
.
T
C
.
.
AC=1;AN=1;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.26726T>C||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", "1|.", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
28,100
.
A
G
.
.
AC=2;AN=2;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.28100A>G||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/1", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
28,300
.
C
T
.
.
AC=16;AN=16;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.28300C>T||||||
GT
[ "1/1", ".", ".", "1/1", ".", "1/1", ".", ".", "1/1", "1/1", "1/1", ".", "1/1", ".", ".", ".", "1/1" ]
ex1.eff.vcf
7
30,089
.
A
G
.
.
AC=1;AN=2;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.30089A>G||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/0", ".", ".", "." ]
ex1.eff.vcf
7
30,156
.
G
A
.
.
AC=27;AN=29;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.30156G>A||||||
GT
[ "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", ".", "1/1", ".", "1/0", "1/0", "1/.", "1/1" ]
ex1.eff.vcf
7
31,257
.
T
C
.
.
AC=1;AN=2;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.31257T>C||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", "1/0", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
31,492
.
G
A
.
.
AC=1;AN=2;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.31492G>A||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", "1/0", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
33,371
.
C
G
.
.
AC=24;AN=24;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.33371C>G||||||
GT
[ "1/1", ".", ".", "1/.", "1/1", "1/1", "1/1", "1/1", ".", "1/1", "1/1", "1/1", "1/1", "1/1", "1/.", ".", "1/1" ]
ex1.eff.vcf
7
33,595
.
G
C
.
.
AC=30;AN=30;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.33595G>C||||||
GT
[ "1/1", "1/1", "1/.", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1|1", "1/1", "1/1", ".", "1/1", "1/1", "1/1", "1/." ]
ex1.eff.vcf
7
33,620
.
A
G
.
.
AC=1;AN=2;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.33620A>G||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/0", ".", "." ]
ex1.eff.vcf
7
33,673
.
T
A
.
.
AC=31;AN=32;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.33673T>A||||||
GT
[ "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/0", ".", "1/1", "1/1", "1/1" ]
ex1.eff.vcf
7
34,215
.
T
C
.
.
AC=33;AN=34;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.34215T>C||||||
GT
[ "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/0", "1/1", "1/1", "1/1", "1/1" ]
ex1.eff.vcf
7
34,335
.
T
A
.
.
AC=2;AN=4;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.34335T>A||||||
GT
[ ".", ".", ".", ".", ".", "1/0", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/0" ]
ex1.eff.vcf
7
35,326
.
C
T
.
.
AC=4;AN=4;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.35326C>T||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", "1|.", "1|.", "1/1", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
35,396
.
A
G
.
.
AC=1;AN=2;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.35396A>G||||||
GT
[ ".", ".", ".", ".", ".", ".", "1/0", ".", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
35,411
.
T
G
.
.
AC=1;AN=2;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.35411T>G||||||
GT
[ ".", ".", ".", ".", "1/0", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
35,486
.
GCCG
GCCA
.
.
AC=1;AN=1;ANN=GCCA|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.35489G>A||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/.", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
35,489
.
G
A
.
.
AC=2;AN=3;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.35489G>A||||||
GT
[ "1|.", ".", ".", ".", ".", "1|0", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
35,631
.
G
C
.
.
AC=28;AN=28;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.35631G>C||||||
GT
[ "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", ".", "1/1", "1/.", "1/1", "1/1", "1/.", ".", "1/1", "1/1", "1/1", "1|1" ]
ex1.eff.vcf
7
36,012
.
G
A
.
.
AC=1;AN=2;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.36012G>A||||||
GT
[ ".", ".", "1/0", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
36,114
.
A
G
.
.
AC=1;AN=2;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.36114A>G||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", "1/0", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
37,953
.
AT
A
.
.
AC=8;AN=10;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.37954delT||||||
GT
[ ".", ".", ".", ".", ".", "1|0", ".", ".", ".", "1|0", ".", ".", "1/1", ".", "1/1", "1|.", "1/." ]
ex1.eff.vcf
7
38,051
.
C
T
.
.
AC=2;AN=4;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.38051C>T||||||
GT
[ ".", "1|0", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1|0" ]
ex1.eff.vcf
7
38,424
.
G
A
.
.
AC=34;AN=34;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.38424G>A||||||
GT
[ "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1" ]
ex1.eff.vcf
7
38,524
.
A
G
.
.
AC=34;AN=34;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.38524A>G||||||
GT
[ "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1" ]
ex1.eff.vcf
7
38,775
.
T
A
.
.
AC=1;AN=2;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.38775T>A||||||
GT
[ ".", ".", ".", ".", "1/0", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
39,122
.
G
A
.
.
AC=1;AN=2;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.39122G>A||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/0", "." ]
ex1.eff.vcf
7
39,569
.
T
C
.
.
AC=1;AN=2;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.39569T>C||||||
GT
[ ".", ".", ".", ".", "1/0", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
39,652
.
A
G
.
.
AC=24;AN=24;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.39652A>G||||||
GT
[ "1/1", "1/1", "1/1", "1/1", ".", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", ".", ".", "1/1", ".", "." ]
ex1.eff.vcf
7
39,657
.
G
A
.
.
AC=23;AN=23;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.39657G>A||||||
GT
[ "1/1", "1/1", "1/1", "1/1", ".", "1/1", "1/.", "1/1", "1/1", "1/1", "1/1", "1/1", ".", ".", "1/1", ".", "." ]
ex1.eff.vcf
7
40,053
.
A
G
.
.
AC=2;AN=2;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.40053A>G||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/1", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
40,483
.
G
A
.
.
AC=2;AN=4;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.40483G>A||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "0|1", "1/0", ".", "." ]
ex1.eff.vcf
7
40,505
.
T
C
.
.
AC=1;AN=2;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.40505T>C||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", "0|1", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
40,845
.
C
T
.
.
AC=1;AN=2;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.40845C>T||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/0", ".", ".", "." ]
ex1.eff.vcf
7
40,852
.
A
G
.
.
AC=33;AN=34;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.40852A>G||||||
GT
[ "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/0", "1/1", "1/1", "1/1", "1/1" ]
ex1.eff.vcf
7
40,943
.
C
A
.
.
AC=2;AN=4;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.40943C>A||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/0", "1/0", ".", "." ]
ex1.eff.vcf
7
41,331
.
A
G
.
.
AC=34;AN=34;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.41331A>G||||||
GT
[ "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1" ]
ex1.eff.vcf
7
41,888
.
C
T
.
.
AC=31;AN=34;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.41888C>T||||||
GT
[ "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1|0", "1/0", "1|0", "1/1", "1/1" ]
ex1.eff.vcf
7
41,892
.
G
C
.
.
AC=1;AN=2;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.41892G>C||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "0|1", ".", "." ]
ex1.eff.vcf
7
42,038
.
G
C
.
.
AC=31;AN=34;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.42038G>C||||||
GT
[ "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/0", "1/0", "1/0", "1/1", "1/1" ]
ex1.eff.vcf
7
42,192
.
C
G
.
.
AC=1;AN=2;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.42192C>G||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "0|1", ".", ".", ".", "." ]
ex1.eff.vcf
7
43,249
.
A
G
.
.
AC=1;AN=2;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.43249A>G||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/0", ".", ".", ".", "." ]
ex1.eff.vcf
7
44,935
.
C
T
.
.
AC=31;AN=34;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.44935C>T||||||
GT
[ "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/0", "1/0", "1|0", "1/1", "1/1" ]
ex1.eff.vcf
7
45,342
.
C
G
.
.
AC=32;AN=34;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.45342C>G||||||
GT
[ "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1|0", "1|0", "1/1", "1/1" ]
ex1.eff.vcf
7
45,653
.
C
T
.
.
AC=32;AN=34;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.45653C>T||||||
GT
[ "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1|0", "1|0", "1/1", "1/1" ]
ex1.eff.vcf
7
46,239
.
G
A
.
.
AC=32;AN=34;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.46239G>A||||||
GT
[ "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1|0", "1|0", "1/1", "1/1" ]
ex1.eff.vcf
7
46,300
.
CT
GT
.
.
AC=31;AN=33;ANN=GT|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.46300C>G||||||
GT
[ "1/1", "1/1", "1|1", "1/.", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/0", "1/0", "1/1", "1/1" ]
ex1.eff.vcf
7
46,478
.
A
G
.
.
AC=32;AN=34;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.46478A>G||||||
GT
[ "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1|1", "1/1", "1/1", "1|0", "1|0", "1/1", "1/1" ]
ex1.eff.vcf
7
47,042
.
A
G
.
.
AC=34;AN=34;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.47042A>G||||||
GT
[ "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1", "1/1" ]
ex1.eff.vcf
7
47,486
.
T
A
.
.
AC=1;AN=2;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.47486T>A||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/0", ".", ".", ".", "." ]
ex1.eff.vcf
7
47,612
.
G
A
.
.
AC=1;AN=2;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.47612G>A||||||
GT
[ ".", "1/0", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
48,732
.
C
G
.
.
AC=1;AN=2;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.48732C>G||||||
GT
[ ".", ".", ".", ".", ".", ".", "1/0", ".", ".", ".", ".", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
49,672
.
C
T
.
.
AC=14;AN=15;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.49672C>T||||||
GT
[ ".", "1/1", ".", ".", "1/1", ".", "1/1", "1/.", ".", ".", "1|1", ".", "1/1", "1|0", ".", "1/1", "." ]
ex1.eff.vcf
7
49,704
.
GAA
GAG
.
.
AC=2;AN=2;ANN=GAG|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.49706A>G||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", "1/.", ".", ".", ".|1", ".", ".", ".", ".", ".", "." ]
ex1.eff.vcf
7
49,706
.
A
G
.
.
AC=15;AN=16;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.49706A>G||||||
GT
[ "1|.", "1/1", "1|.", "1/1", "1|.", "1|1", "1/1", ".", ".", "1|.", ".", ".", "1/1", ".", "1/0", ".", "." ]
ex1.eff.vcf
7
49,852
.
TA
T
.
.
AC=1;AN=2;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.49853delA||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/0", ".", ".", ".", "." ]
ex1.eff.vcf
7
50,154
.
T
G
.
.
AC=1;AN=2;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.50154T>G||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/0", ".", ".", ".", "." ]
ex1.eff.vcf
7
50,257
.
C
T
.
.
AC=24;AN=34;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.50257C>T||||||
GT
[ "1/0", "1/1", "1/1", "1/0", "1/1", "1/1", "1|0", "1/1", "1/0", "1/0", "1/0", "1/0", "1/0", "1/0", "1|0", "1/1", "1/1" ]
ex1.eff.vcf
7
50,354
.
C
A
.
.
AC=23;AN=34;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.50354C>A||||||
GT
[ "1/0", "1/1", "1/1", "1/0", "1/1", "1/1", "1|0", "1/1", "1/0", "1/0", "1/0", "1/0", "1/0", "1/0", "1|0", "1/0", "1/1" ]
ex1.eff.vcf
7
50,403
.
C
T
.
.
AC=1;AN=2;ANN=T|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.50403C>T||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/0", ".", ".", ".", "." ]
ex1.eff.vcf
7
50,462
.
A
C
.
.
AC=18;AN=28;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.50462A>C||||||
GT
[ "1/0", "1/0", "1/0", "1/1", ".", ".", "1/0", "1/0", "1/0", "1/0", "1/0", "1/1", "1/1", "1/0", ".", "1/1", "1/0" ]
ex1.eff.vcf
7
50,511
.
C
G
.
.
AC=2;AN=4;ANN=G|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.50511C>G||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "1/0", "1/0", ".", ".", "." ]
ex1.eff.vcf
7
50,552
.
T
C
.
.
AC=8;AN=16;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.50552T>C||||||
GT
[ ".", "1/0", ".", ".", "1/0", "1/0", "1|0", ".", "1/0", "1/0", "1/0", ".", ".", ".", "1|0", ".", "." ]
ex1.eff.vcf
7
50,571
.
T
C
.
.
AC=1;AN=2;ANN=C|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.50571T>C||||||
GT
[ ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", ".", "0|1", ".", "." ]
ex1.eff.vcf
7
50,612
.
G
A
.
.
AC=9;AN=18;ANN=A|intergenic_region|MODIFIER|CHR_START-AC093627.7|CHR_START-ENSG00000232325|intergenic_region|CHR_START-ENSG00000232325|||n.50612G>A||||||
GT
[ ".", "1/0", ".", ".", "1|0", "1/0", "1|0", ".", "1/0", "1/0", "1/0", ".", "1/0", ".", "1|0", ".", "." ]
ex1.eff.vcf
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