code stringlengths 1 199k |
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"""
This module contains tasks for asynchronous execution of grade updates.
"""
from logging import getLogger
import six
from celery import task
from celery_utils.logged_task import LoggedTask
from celery_utils.persist_on_failure import PersistOnFailureTask
from django.conf import settings
from django.contrib.auth.mode... |
import sys,os,json
import course,rectangle,details
import caldata
import csvverifier
import year
import datetime
year = year.Year([datetime.date(2011,10,4),datetime.date(2012,1,17),datetime.date(2012,4,24)])
def update_calendar(det_str,cal):
c = course.Course(det_str['id'],det_str['name'])
cal.refresh_course(c)... |
"""Module for handling miscellaneous web pages of the website.""" |
import numpy as np
from math import *
from essentia_test import *
class TestFalseStereoDetector(TestCase):
def testZero(self):
size = 512
zeros = array([(0., 0.)] * size)
self.assertEqual(FalseStereoDetector()(zeros),
(0, 0.))
def testOneChannelBias(self):
... |
from PIL import Image
import glob, os
for infile in glob.glob("*.jpg"):
file, ext = os.path.splitext(infile)
im = Image.open(infile)
width, height = im.size
sizem = 1024,height
if int(width) > 1024:
imm.thumbnail(sizem, Image.ANTIALIAS)
imm.save(file + "_display_1024","JPEG")
els... |
from odoo import fields, models
class ResCompany(models.Model):
_inherit = "res.company"
cons_invoice_text = fields.Html()
due_from_account_id = fields.Many2one("account.account", "Due From")
due_to_account_id = fields.Many2one("account.account", "Due To")
due_fromto_payment_journal_id = fields.Many... |
"""
Tests for course_overviews app.
"""
from cStringIO import StringIO
import datetime
import ddt
import itertools
import math
import mock
import pytz
from django.conf import settings
from django.test.utils import override_settings
from django.utils import timezone
from PIL import Image
from lms.djangoapps.certificates... |
from decimal import Decimal
from weboob.capabilities.bank import Investment
from weboob.tools.browser2.page import RawPage, HTMLPage, method, ListElement, ItemElement
from weboob.tools.browser2.filters import CleanDecimal, CleanText, Date
from weboob.tools.capabilities.bank.transactions import FrenchTransaction
__all__... |
"""
Provides XML I{element} classes.
"""
from logging import getLogger
from suds import *
from suds.sax import *
from suds.sax.attribute import Attribute
import sys
if sys.version_info < (2, 4, 0):
from sets import Set as set
del sys
log = getLogger(__name__)
class Element:
"""
An XML element object.
... |
from odoo import api, fields, models, _
from odoo.exceptions import UserError
class HelpDeskPhoneCallConfirm(models.TransientModel):
_name = 'helpdesk.phonecall.confirm'
_description = 'Wizard to confirm phonecall'
@api.multi
def action_confirm_finish_phonecall(self):
context = dict(self._contex... |
import numpy as np
from numpy.linalg import inv
from numpy.core.umath_tests import inner1d
def initialize_gpu():
from cudamat import cudamat as cm
global cm
# this class wraps matrix operations so that you can switch between numpy and cuda operations
cm.cuda_set_device(0)
cm.init()
def random(size,t... |
import inspect
import functools
import logging
import uuid
import sys
from datetime import datetime, timedelta, MINYEAR
from cPickle import loads, dumps, UnpicklingError
from openerp import SUPERUSER_ID
from openerp.tools import DEFAULT_SERVER_DATETIME_FORMAT
from openerp.tools.translate import _
from ..exception impor... |
from __future__ import (unicode_literals, print_function,
absolute_import, division)
from pyramid.i18n import TranslationStringFactory
from netprofile.common.hooks import register_hook
_ = TranslationStringFactory('netprofile_domains')
@register_hook('core.dpanetabs.domains.Domain')
def _dpane_d... |
from intelmq.lib.bot import Bot, sys
from intelmq.lib.message import Event
from intelmq.lib import utils
class DragonResearchGroupSSHParserBot(Bot):
def process(self):
report = self.receive_message()
if not report.contains("raw"):
self.acknowledge_message()
raw_report = utils.bas... |
from . import models
from . import wizard
from . import tests |
"""Provide kiskadee Database operations."""
from sqlalchemy import create_engine, orm
import kiskadee
from kiskadee.model import Base
from kiskadee.model import Package, Fetcher, Version, Report, Analysis
class Database:
"""kiskadee Database class."""
def __init__(self, db='db_development'):
"""Return a... |
"""
This module provides utility functions for django_comment_client
"""
from pymongo.errors import PyMongoError
from pymongo import MongoClient
from django.conf import settings
from django.contrib.auth.models import User
MONGO_PARAMS = settings.FORUM_MONGO_PARAMS
def get_mongo_connection_string():
"""
Creates ... |
""" @file TP.py
Temporal pooler implementation.
This is the Python implementation and is used as the base class for the C++
implementation.
"""
import copy
import cPickle as pickle
import itertools
import numpy
from nupic.bindings.math import Random
from nupic.bindings.algorithms import getSegmentActivityLevel, isSegme... |
from flask import Blueprint, render_template
ag4_40323109 = Blueprint('ag4_40323109', __name__, url_prefix='/ag4_40323109', template_folder='templates')
@ag4_40323109.route('/A')
def task1():
outstring = '''
<!DOCTYPE html>
<html>
<head>
<meta charset="UTF-8">
<title>網際 2D 繪圖</title>
<!-- IE 9: disp... |
from odoo import api, models, fields
class GlobalTag(models.Model):
_inherit = 'clv.global_tag'
family_aux_ids = fields.Many2many(
comodel_name='clv.family_aux',
relation='clv_family_aux_global_tag_rel',
column1='global_tag_id',
column2='family_aux_id',
string='Families (... |
"""
Extension of the datetime module to suit HRSelf project needs.
"""
import datetime
from datetime import timedelta
import types
import xmlrpclib
DAY = DAYS = timedelta(days=1)
DATE_FORMAT = '%Y-%m-%d'
DATETIME_FORMAT = '%Y-%m-%d %H:%M:%S'
XML_RPC_DATETIME_FORMAT = '%Y%m%dT%H:%M:%S'
def to_date(obj, date_format=None)... |
from __future__ import unicode_literals
import urllib
from copy import deepcopy
from mock import MagicMock, mock_open
from nose_parameterized import parameterized
from django.test import TestCase
from django.core.exceptions import ObjectDoesNotExist
from django.test.utils import override_settings
from wstore.asset_mana... |
"""Views, navigation and actions for BranchMergeProposals."""
__metaclass__ = type
__all__ = [
'BranchMergeCandidateView',
'BranchMergeProposalActionNavigationMenu',
'BranchMergeProposalAddVoteView',
'BranchMergeProposalChangeStatusView',
'BranchMergeProposalCommitMessageEditView',
'BranchMergeP... |
from io import BytesIO
import json
import os
import re
from hashlib import md5
from itertools import chain
import unicodedata
import mimetypes
from django.conf import settings
from django.contrib.contenttypes import generic
from django.contrib.contenttypes.models import ContentType
from django.core.exceptions import Va... |
"""
Unit tests for video-related REST APIs.
"""
import csv
import json
import re
from datetime import datetime
from functools import wraps
from StringIO import StringIO
from contextlib import contextmanager
import dateutil.parser
import ddt
import pytz
from django.conf import settings
from django.test.utils import over... |
"""
Mappers
=======
Mappers are the ConnectorUnit classes responsible to transform
external records into Odoo records and conversely.
"""
import logging
from collections import namedtuple
from contextlib import contextmanager
from odoo import models
from ..connector import ConnectorUnit, MetaConnectorUnit, ConnectorEnv... |
from . import mrp_product_caliber |
import json
import nose
import sys
from nose.tools import assert_equal, raises
import pylons
from pylons import config
import sqlalchemy.orm as orm
import paste.fixture
import ckan.plugins as p
import ckan.lib.create_test_data as ctd
import ckan.model as model
import ckan.tests.legacy as tests
import ckan.config.middle... |
from django.contrib.auth.models import User
from django.urls import reverse
from wger.core.tests.base_testcase import WgerTestCase
from wger.utils.helpers import make_token
class WorkoutPdfLogExportTestCase(WgerTestCase):
"""
Tests exporting a workout as a pdf
"""
def export_pdf_token(self):
"""... |
{
'!langcode!': 'id',
'!langname!': 'Indonesian',
'%d days ago': '%d hari yang lalu',
'%d hours ago': '%d jam yang lalu',
'%d minutes ago': '%d menit yang lalu',
'%d months ago': '%d bulan yang lalu',
'%d seconds ago': '%d detik yang lalu',
'%d seconds from now': '%d detik dari sekarang',
'%d weeks ago': '%d minggu yan... |
from numpy import median
from numpy import where
import numpy as np
from pitchfilter.pitchfilter import PitchFilter
from morty.pitchdistribution import PitchDistribution
from morty.converter import Converter
import matplotlib.pyplot as plt
import matplotlib.ticker
from copy import deepcopy
__author__ = 'hsercanatli'
cl... |
"""
Serializers for use in the support app.
"""
from rest_framework import serializers
from student.models import ManualEnrollmentAudit
class ManualEnrollmentSerializer(serializers.ModelSerializer):
"""Serializes a manual enrollment audit object."""
enrolled_by = serializers.SlugRelatedField(slug_field='email',... |
__metaclass__ = type
from doctest import DocTestSuite
import time
import unittest
from zope.interface import (
directlyProvidedBy,
directlyProvides,
)
from lp.registry.interfaces.person import PersonVisibility
from lp.services.mail.helpers import (
ensure_not_weakly_authenticated,
ensure_sane_signat... |
import json
import requests
import rdflib
from pylons import config
import ckan.plugins as p
from ckanext.dcat.interfaces import IDCATRDFHarvester
from ckanext.sweden.dcat import template_helpers
VALIDATION_SERVICE = 'https://validator.dcat-editor.com/service'
rdflib.plugin.register(
'application/octet-stream', rdf... |
from . import test_analytic_attribution |
from AccessControl import getSecurityManager
from Products.CMFCore.permissions import ModifyPortalContent
from bika.lims import bikaMessageFactory as _
from bika.lims.utils import t
from bika.lims.browser.bika_listing import BikaListingView
from bika.lims.utils import getUsers
from bika.lims.permissions import *
from b... |
import copy
from shinken_test import *
class TestConfig(ShinkenTest):
#setUp is in shinken_test
def get_hst(self):
return self.sched.hosts.find_by_name("test_host_0")
#Look if get_*_name return the good result
def test_get_name(self):
hst = self.get_hst()
print hst.get_dbg_name()... |
import nose
from flask_testing import TestCase
if __name__ == '__main__' and __package__ is None:
from os import sys, path
sys.path.append(path.dirname(path.dirname(path.abspath(__file__))))
from call_server.app import create_app, db
from call_server.config import TestingConfig
from call_server.extensions impor... |
import pytest
from edisgo.network.topology import Topology
from edisgo.io import ding0_import
from edisgo.network.components import Generator, Load, Switch
from edisgo.network.grids import LVGrid
class TestGrids:
@classmethod
def setup_class(self):
self.topology = Topology()
ding0_import.import_... |
from __future__ import unicode_literals
from collections import OrderedDict
import json
from random import randint
from django.utils import timezone
from dash.categories.models import Category
from dash.orgs.models import Org
from dash.stories.models import Story
from datetime import datetime
from django.contrib.auth.m... |
import sys
import os
import shlex
from sphinx import version_info
major, minor, patch, label, label_number = version_info
sys.path.insert(0, os.path.abspath('../src'))
extensions = [
'sphinx.ext.autodoc',
'sphinx.ext.intersphinx'
]
if major >= 1 and minor >= 3:
# Included in Sphinx 1.3
extensions.append... |
'''Infrastructure helpers for the library.'''
__all__ = ('get_class_name', 'combination', 'RejectError', 'Taker', 'Args')
import types
def get_class_name(obj):
return obj.__class__.__name__
class RejectError(Exception):
pass
class Taker(object):
'''Base class for taker objects.
The Taker base class give... |
""" Tests for pkgdb messages """
import unittest
from fedmsg.tests.test_meta import Base
from .common import add_doc
class TestPkgdbACLUpdate(Base):
""" The Fedora `Package DB <https://admin.fedoraproject.org/pkgdb>`_
publishes these messages when an ACL changes on a package.
"""
expected_title = "pkgdb... |
"""
This module implements a fancy logger on top of python logging
It adds:
- custom specifiers for mpi logging (the mpirank) with autodetection of mpi
- custom specifier for always showing the calling function's name
- rotating file handler
- a default formatter.
- logging to an UDP server (vsc.logging.logdaemon.... |
from unittest import TestCase
from mock import patch, Mock
from gofer.common import ThreadSingleton
from gofer.messaging.model import Document, VERSION
from gofer.messaging.adapter.url import URL
from gofer.messaging.adapter.model import Model, _Domain, Node
from gofer.messaging.adapter.model import BaseExchange, Excha... |
"""Test of cell and row reading in Writer tables."""
from macaroon.playback import *
import utils
sequence = MacroSequence()
sequence.append(PauseAction(5000))
sequence.append(KeyComboAction("<Control>Home"))
sequence.append(KeyComboAction("Down"))
sequence.append(KeyComboAction("Down"))
sequence.append(KeyComboAction(... |
from setuptools import setup
from subprocess import Popen, PIPE
import os
import re
def read_file(path):
with open(os.path.join(os.path.dirname(__file__), path)) as fp:
return fp.read()
def _get_version_match(content):
# Search for lines of the form: # __version__ = 'ver'
regex = r"^__version__ = ['... |
import soaplib
from soaplib.core.service import soap
from soaplib.core.service import DefinitionBase
from soaplib.core.model.primitive import String, Integer
from soaplib.core.server import wsgi
from soaplib.core.model.clazz import Array
'''
This is a simple HelloWorld example to show the basics of writing
a webservice... |
from api import ProteusClient |
from threading import Thread, get_ident, Barrier
from functools import update_wrapper
from gi.repository import Gtk, GLib
class GuiThread(Thread):
thread_id = None
instance = None
def __init__(self):
super().__init__(daemon=True)
self.start()
GuiThread.instace = self
def run(self... |
"""
Created on Sat Oct 3 13:06:06 2015
An Article object that holds information about a scientific article obtained
from the Internet.
@author: Alek
@version: 1.0.0
@since: Sat Oct 3 13:06:06 2015
CHANGELOG:
Sat Oct 3 13:06:06 2015 - 1.0.0 - Alek - Issued the first version based on a class previously defined elsewhe... |
from pycp2k.inputsection import InputSection
class _each284(InputSection):
def __init__(self):
InputSection.__init__(self)
self.Just_energy = None
self.Powell_opt = None
self.Qs_scf = None
self.Xas_scf = None
self.Md = None
self.Pint = None
self.Metady... |
from django.conf.urls import url, include
PK = r'(?P<pk>\d+)'
SLUG = r'(?P<slug>[-a-zA-Z0-9_]+)'
def pattern(*args):
return r'^{}/?$'.format('/'.join(args))
def mini_url(view, *args):
name = '_'.join([i for i in args if '?P' not in i])
return url(pattern(*args), view.as_view(), name=name)
def list_url(view,... |
"""Connectors"""
__copyright__ = "Copyright (C) 2014 Ivan D Vasin"
__docformat__ = "restructuredtext"
from base64 import b64decode as _b64decode
from ... import plain as _plain
from ... import http as _http
from ... import _exc
from ... import _info
from .. import _std_http
class TornadoHttpBasicClerk(_std_http.Tornado... |
import numpy as np
from yt.mods import *
from yt.utilities.physical_constants import cm_per_kpc, cm_per_mpc
import logging
logging.getLogger().setLevel(logging.WARNING)
data = dict(ZVelocity = freeprocessing.stream)
pf = load_uniform_grid(data, data["ZVelocity"].shape, cm_per_mpc,
nprocs=1)
print... |
from __future__ import print_function, absolute_import, division
import os
import sys
BASEPATH = os.path.abspath(os.path.join(os.path.dirname(os.path.realpath(__file__)), '../../'))
if BASEPATH not in sys.path:
sys.path.append(BASEPATH)
os.environ.setdefault("DJANGO_SETTINGS_MODULE", "flutype_webapp.settings")
impo... |
import operator
import sys
COMMONHEADER = """
/* DO NOT EDIT! This is an autogenerated file. See scripts/layoutrom.py. */
OUTPUT_FORMAT("elf32-i386")
OUTPUT_ARCH("i386")
SECTIONS
{
"""
COMMONTRAILER = """
/* Discard regular data sections to force a link error if
* code attempts to access data not mar... |
import numpy as np
from pykdtree.kdtree import KDTree
data_pts_real = np.array([[ 790535.062, -369324.656, 6310963.5 ],
[ 790024.312, -365155.688, 6311270. ],
[ 789515.75 , -361009.469, 6311572. ],
[ 789011. , -356886.562, 6311869.5 ],
[ 788508.438, -352785.969, 631216... |
"""
This demo program illustrates how to solve Poisson's equation
- div grad u(x, y) = f(x, y)
on the unit square with pure Neumann boundary conditions:
du/dn(x, y) = -sin(5*x)
and source f given by
f(x, y) = 10*exp(-((x - 0.5)^2 + (y - 0.5)^2) / 0.02)
Since only Neumann conditions are applied, u is only de... |
import os
from cork.backends import SQLiteBackend
def populate_backend():
b = SQLiteBackend(os.environ['DBNAME'], initialize=True)
b.connection.executescript("""
INSERT INTO users (username, email_addr, desc, role, hash, creation_date) VALUES
(
'admin',
'admin@ccl.io',
... |
from __future__ import division
from __future__ import print_function
def input(in_msg):
import inspect
in_msg.input_file = inspect.getfile(inspect.currentframe())
print("*** read input from ", in_msg.input_file)
# 8=MSG1, 9=MSG2, 10=MSG3
in_msg.sat = "Meteosat"
#in_msg.sat = "meteosat"
#in_... |
__all__ = ['protocols', 'transport', 'endpoint'] |
import os
BASE_DIR = os.path.dirname(os.path.dirname(os.path.abspath(__file__)))
SECRET_KEY = 'wj9rt420!n0(np*gi6#rpb7)y*b2qzp#@3l8p66na#q(4svs!e'
DEBUG = True
ALLOWED_HOSTS = ['localhost', 'django']
INSTALLED_APPS = (
'django.contrib.admin',
'django.contrib.auth',
'django.contrib.contenttypes',
'django... |
def layout(req):
"""This function is included in TEMPLATE_CONTEXT_PROCESSORS as default
by RapidSMS, to inject hacks and settings into the template, without
exposing the entire HttpRequest. That would be... bad."""
# a magic GET parameter can be provided to remove various
# parts of the webui.... |
import sys
import os
RULES = """ANALYSIS_STOPS|(disabled by default)
ARRAY_OUT_OF_BOUNDS_L1|(disabled by default)
ARRAY_OUT_OF_BOUNDS_L2|(disabled by default)
ARRAY_OUT_OF_BOUNDS_L3|(disabled by default)
Abduction_case_not_implemented|(enabled by default)
Array_of_pointsto|(enabled by default)
Assert_failure|(enabled b... |
N=int(input("cuantos numeros promediaremos? "))
if N > 0:
contador = 0
suma = 0
while contador < N:
numero = int(input("entregame el numero "+str(contador+1)+": "))
suma = suma + numero
contador = contador + 1
promedio = suma/N
print("el promedio es "+str(promedio))
if N <= 0... |
class Date( object ):
__name = [ "Invalid", "January", "February", "March", "April",
"May", "June", "July", "August", "September", "October",
"November", "December" ]
__days = [ 0, 31, 28, 31, 30, 31, 30, 31, 31, 30, 31, 30, 31 ]
def __init__( self, month=0, day=0, year=0 ):
""" Cons... |
__description__ = \
"""
Still a hacked script. Uses a nexus file to figure out the names of each
sequence in a set of trees generated by a mrbayes run, then puts those names
into the tree file.
"""
import sys, re
from string import letters
from random import choice
f = open(sys.argv[1],'r')
lines = f.readlines()
f.clo... |
from __future__ import unicode_literals
import re
from .common import InfoExtractor
from ..utils import (
compat_urllib_parse,
compat_urllib_request,
ExtractorError,
find_xpath_attr,
fix_xml_ampersands,
HEADRequest,
unescapeHTML,
url_basename,
RegexNotFoundError,
)
def _media_xml_tag... |
'''
Created on 04.05.2015
@author: vvladych
'''
from gi.repository import Gtk
from masterdata_abstract_window import MasterdataAbstractWindow
from publisher_add_mask import PublisherAddMask
from publisher_list_mask import PublisherListMask
class PublisherWindow(MasterdataAbstractWindow):
def __init__(self, main_win... |
from setuptools import find_packages
from setuptools import setup
REQUIRED_PACKAGES = [
'tensorflow>=1.12.1',
]
setup(
name='trainer',
version='0.1',
install_requires=REQUIRED_PACKAGES,
packages=find_packages(),
include_package_data=True,
requires=[]
) |
from os import environ
from base import *
DATABASES = {
'default': {
'ENGINE': 'django.db.backends.postgresql_psycopg2',
'NAME': environ.get('DATABASE_NAME'),
'USER': environ.get('DATABASE_USER'),
'PASSWORD': environ.get('DATABASE_PASSWORD'),
'HOST': environ.get('DATABASE_HOS... |
"""Code to run lending experiments."""
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
import attr
import core
import params
import rewards
import run_util
from agents import classifier_agents
from agents import oracle_lending_agent
from agents import thresho... |
from __future__ import absolute_import
from __future__ import print_function
from enable.component_editor import ComponentEditor
from traits.api import HasTraits, Any
from traitsui.api import View, Item
class ExtractionLineCanvas(HasTraits):
"""
"""
canvas2D = Any
manager = Any
def toggle_item_ident... |
from libs.traits import IntegerTrait
from libs.individuals import Individual
from libs.biosphere import Biosphere
TARGET = raw_input("String to evolve: ");
traits = {}
class GuesserTrait(IntegerTrait):
int_min = 0
int_max = 255
delta = 5
class StringGuesser(Individual):
traits = traits
mutation_chan... |
"""
File: urls.py
Author: William J. Bosl
Children's Hospital Boston
300 Longwood Avenue
Boston, MA 02115
Email: william.bosl@childrens.harvard.edu
Web: http://chip.org
Copyright (C) 2011 William Bosl, Children's Hospital Boston Informatics Program (CHIP)
http://chip.org.
Purpose... |
import sys
import os
from xml.sax import make_parser, handler
import xml
from util_binary import *
from struct import *
execfile(os.path.join(os.path.dirname(__file__), "weights.py"))
class LoadOsm(handler.ContentHandler):
"""Parse an OSM file looking for routing information, and do routing with it"""
def __init__(... |
"""Utils for upright 3d box."""
import tensorflow as tf
from waymo_open_dataset import label_pb2
from waymo_open_dataset.utils import transform_utils
__all__ = [
'is_within_box_3d', 'compute_num_points_in_box_3d', 'is_within_box_2d',
'get_upright_3d_box_corners', 'transform_point', 'transform_box',
'box_to_... |
import abc
import fractions
from oslo_config import cfg
from oslo_log import log as logging
import six
from stevedore import driver
from voluptuous import All
from voluptuous import Any
from voluptuous import Coerce
from voluptuous import Error as VoluptuousError
from voluptuous import In
from voluptuous import Invalid... |
"""service_profile
"""
revision = '9744740aa75c'
down_revision = 'fd98aa15958d'
from alembic import op
import sqlalchemy as sa
def upgrade():
op.create_table(
'service_profiles',
sa.Column('id', sa.String(36), nullable=False),
sa.Column('tenant_id', sa.String(length=255), nullable=True),
... |
from django.shortcuts import render
from nuit.views import SearchableListView
from .models import Publisher
from .forms import PublisherForm
from django.contrib import messages
from django.contrib.auth.decorators import permission_required
class MyListView(SearchableListView):
model = Publisher
template_name = ... |
'''
You are given two linked lists representing two non-negative numbers. The digits are stored in reverse order and each of their nodes contain a single digit. Add the two numbers and return it as a linked list.
Input: (2 -> 4 -> 3) + (5 -> 6 -> 4)
Output: 7 -> 0 -> 8
'''
'''
The main idea is quite simple, but need to... |
import ray
ray.init(num_cpus=2)
def compute(i):
return i * 2
pipeline = ray.data.range(10).repeat(100)
pipeline = pipeline.map(compute).map(compute).map(compute).map(compute)
pipeline.repartition(1).write_json("/tmp/output") |
import os
import pytest
import subprocess
import glob
import pdb
def test_runGATK_UG(hive_dir, bgzip_folder, gatk_folder, datadir, clean_tmp):
bam_file = "{0}/exampleBAM.bam".format(datadir)
reference = "{0}/exampleFASTA.fasta".format(datadir)
work_dir = "{0}/outdir".format(datadir)
command="perl {0}/sc... |
import os, sys, traceback, math, decimal
import arcpy
from arcpy import env
from arcpy import sa
def zfactor(dataset):
desc = arcpy.Describe(dataset)
# if it's not geographic return 1.0
if desc.spatialReference.type != "Geographic":
return 1.0
extent = desc.Extent
extent_split = [extent.XMin... |
import re
import collections
from enum import Enum
from ydk._core._dm_meta_info import _MetaInfoClassMember, _MetaInfoClass, _MetaInfoEnum
from ydk.types import Empty, YList, YLeafList, DELETE, Decimal64, FixedBitsDict
from ydk._core._dm_meta_info import ATTRIBUTE, REFERENCE_CLASS, REFERENCE_LIST, REFERENCE_LEAFLIST, ... |
import os
from traits.api import Dict
from pychron.core.helpers.strtools import to_csv_str
from pychron.loggable import Loggable
from pychron.paths import paths
def write_txt_file(p, out):
with open(p, 'w') as wfile:
for line in out:
wfile.write('{}\n'.format(to_csv_str(line)))
class AutomatedRu... |
from google.cloud import dialogflowcx_v3beta1
async def sample_create_transition_route_group():
# Create a client
client = dialogflowcx_v3beta1.TransitionRouteGroupsAsyncClient()
# Initialize request argument(s)
transition_route_group = dialogflowcx_v3beta1.TransitionRouteGroup()
transition_route_gr... |
'''
Copyright 2018 University of Michigan
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
http://www.apache.org/licenses/LICENSE-2.0
Unless required by applicable law or a... |
import os
import sys
try:
from setuptools import find_packages
from setuptools import setup
packages = find_packages()
except ImportError:
from distutils.core import setup
packages = ['cooperative']
if sys.argv[-1] == 'publish':
os.system('python setup.py sdist upload')
sys.exit()
def read(f... |
import pandas as pd
import os
KNOWLEDGE_BASE_PATH = os.path.dirname(__file__)
KNOWLEDGE_BASE_FILE = os.path.join(KNOWLEDGE_BASE_PATH, "periodic-table-extract.csv")
def get_kb_value(element, column_name):
kb = pd.read_csv(KNOWLEDGE_BASE_FILE, dtype=object)
return str(kb[kb["Element"].str.lower() == element.lower... |
"""Tests for tensorflow.python.framework.ops."""
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
import tensorflow.python.platform
from tensorflow.python.framework import device as pydev
from tensorflow.python.framework import ops
from tensorflow.python.frame... |
tequila_list = ["Jose Cuervo", "JLP", "Herradura", "El Jimador", "Arette", "Casa Noble","Don Julio Blanco", "Don Julio", "Don Julio 1942", "KAH", "Patron",\
"Porfidio", "1800", "1800 Anejo", "Fortaleza", "T1", "Gran Centenario", "Jose Cuervo Reserva"]
weights = {
"jose cuervo":0.9, #guess
"jlp":... |
import json
import logging
import os, csv
from utils import Util
from subprocess import check_output, CalledProcessError
class Reputation(object):
BATCH_SIZE = 1
REP_KEY = 'rep'
CAT_KEY = 'cat'
AFLAG_KEY = 'aflag'
DEFAULT_REP = 16
QUERY_PLACEHOLDER = "###QUERY###"
def __init__(self,conf,logg... |
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function
class Preprocessor(object):
"""Defines an abstract observation preprocessor function."""
def __init__(self, options):
self.options = options
self._init()
def _init(self):
pass... |
import hashlib
import plistlib
from datetime import datetime
from django.utils import timezone
from urllib import quote
import unicodecsv as csv
from django.conf import settings
from django.contrib.auth.decorators import login_required
from django.core.urlresolvers import reverse
from django.http import (HttpResponse, ... |
import RPi.GPIO as GPIO
import time
import os
import gpio_utilities
power_pin = 43
GPIO.setwarnings(False)
GPIO.setmode(GPIO.BCM)
GPIO.setup(power_pin, GPIO.IN)
try:
while True:
if gpio_utilities.getGPIOInput(power_pin1, 20) == GPIO.LOW:
# print GPIO.input(power_pin)
os.system("halt"... |
import threading
class LocalizationData:
def __init__(self, localization_pb=None):
self.localization_pb = localization_pb
def update(self, localization_pb):
self.localization_pb = localization_pb |
"""Tests for ceilometer/storage/impl_mongodb.py
.. note::
In order to run the tests against another MongoDB server set the
environment variable CEILOMETER_TEST_MONGODB_URL to point to a MongoDB
server before running the tests.
"""
from ceilometer.storage import base
from ceilometer.storage import impl_mongodb
fro... |
from gyun.iaas import constants as const
from gyun.misc.utils import filter_out_none
class S2Action(object):
def __init__(self, conn):
self.conn = conn
def create_s2_server(self,
vxnet,
service_type,
s2_server_name=None,
... |
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