BioInteract / README.md
gmanolache's picture
Update README.md
1337038 verified
metadata
dataset_info:
  features:
    - name: sourceTaxonName
      dtype: string
    - name: sourceTaxonRank
      dtype: string
    - name: targetTaxonName
      dtype: string
    - name: targetTaxonRank
      dtype: string
    - name: interactionTypeName
      dtype: string
    - name: sourceTaxonKingdomName
      dtype: string
    - name: sourceTaxonPhylumName
      dtype: string
    - name: sourceTaxonClassName
      dtype: string
    - name: sourceTaxonOrderName
      dtype: string
    - name: sourceTaxonFamilyName
      dtype: string
    - name: sourceTaxonGenusName
      dtype: string
    - name: targetTaxonKingdomName
      dtype: string
    - name: targetTaxonPhylumName
      dtype: string
    - name: targetTaxonClassName
      dtype: string
    - name: targetTaxonOrderName
      dtype: string
    - name: targetTaxonFamilyName
      dtype: string
    - name: targetTaxonGenusName
      dtype: string
    - name: year
      dtype: string
    - name: month
      dtype: string
    - name: day
      dtype: string
    - name: decimalLatitude
      dtype: string
    - name: decimalLongitude
      dtype: string
    - name: license
      dtype: string
    - name: referenceCitation
      dtype: string
    - name: sourceVernacularName
      list: string
    - name: targetVernacularName
      list: string
    - name: imageURL
      dtype: string
  splits:
    - name: train
      num_bytes: 153224188
      num_examples: 256758
  download_size: 10399847
  dataset_size: 153224188
configs:
  - config_name: default
    data_files:
      - split: train
        path: data/train-*
license: cc
task_categories:
  - text-to-image
  - image-to-text
  - visual-question-answering
  - zero-shot-image-classification
language:
  - en
pretty_name: >-
  Scalable Benchmark for Evaluating Vision-Language Models under Semantic
  Variation
size_categories:
  - 100K<n<1M

BioInteract: Scalable Benchmark for Evaluating Vision-Language Models under Semantic Variation

Description

BioInteract comprising richly annotated images depicting interactions between organsims, or biotic interactions, provides a natural testbed for tasks involving images and unconstrained, free-form natural language, as interacting organisms are discerned from images alone and their relationship can be expressed through multiple linguistic forms.

BioInteract Dataset

BioInteract, the largest publicly available multimodal dataset of biotic interaction, specifically curated for vision and machine learning application in the context of AI-driven ecological research. BioInteract includes 256K images annotated with 15.4K unique biotic interactions knowledge graphs which represent the semantic relationship between entities as triplets—source taxon, interaction type, target taxon—across five kingdoms (Animalia, Plantae, Fungi, Chromista, and incertae sedis) and nine ecologically standardized interaction types. A key contribution of BioInteract is that it can generate semantically controlled linguistic variations directly from the underlying knowledge graph. By leveraging structured triplets, we can systematically construct both meaning-preserving and contradictory query variants, enabling explicit control over semantic similarity. This allows us to disentangle correctness from consistency and to rigorously evaluate model robustness under targeted linguistic transformations.

Directory

main/
├── BioInteract/
│   └── train-00000-of-00001.parquet
├── BioInteract-benchmark/
│   ├── BioInteractCommon.csv
│   └── BioInteract100.csv
├──README.md
└──.gitattributes