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def _plot_rprof_list ( sdat , lovs , rprofs , metas , stepstr , rads = None ) : """Plot requested profiles"""
if rads is None : rads = { } for vfig in lovs : fig , axes = plt . subplots ( ncols = len ( vfig ) , sharey = True ) axes = [ axes ] if len ( vfig ) == 1 else axes fname = 'rprof_' for iplt , vplt in enumerate ( vfig ) : xlabel = None for ivar , rvar in enumerate ( vplt ) : ...
def _get_comparison_strings ( self , s ) : """Find all similar strings"""
str_len = len ( s ) comparison_idxs = make_unique_ngrams ( s , self . idx_size ) min_len = len ( s ) - self . plus_minus if min_len < 0 : min_len = 0 if self . _els_idxed is None : raise UnintitializedError ( 'Database not created' ) all_sets = set ( ) for idx in comparison_idxs : found_idx = self . _els_id...
def sort ( self , column , order = Qt . AscendingOrder ) : """Overriding sort method"""
reverse = ( order == Qt . DescendingOrder ) if column == 0 : self . sizes = sort_against ( self . sizes , self . keys , reverse ) self . types = sort_against ( self . types , self . keys , reverse ) try : self . keys . sort ( reverse = reverse ) except : pass elif column == 1 : self ...
def reload_scoped_variables_list_store ( self ) : """Reloads the scoped variable list store from the data port models"""
if isinstance ( self . model , ContainerStateModel ) : tmp = self . get_new_list_store ( ) for sv_model in self . model . scoped_variables : data_type = sv_model . scoped_variable . data_type # get name of type ( e . g . ndarray ) data_type_name = data_type . __name__ # get modul...
def reverse ( self , query , exactly_one = DEFAULT_SENTINEL , timeout = DEFAULT_SENTINEL , feature_code = None , lang = None , find_nearby_type = 'findNearbyPlaceName' , ) : """Return an address by location point . . . versionadded : : 1.2.0 : param query : The coordinates for which you wish to obtain the clo...
if exactly_one is DEFAULT_SENTINEL : warnings . warn ( '%s.reverse: default value for `exactly_one` ' 'argument will become True in geopy 2.0. ' 'Specify `exactly_one=False` as the argument ' 'explicitly to get rid of this warning.' % type ( self ) . __name__ , DeprecationWarning , stacklevel = 2 ) exactly_one ...
def result_code ( self , value ) : """The result _ code property . Args : value ( string ) . the property value ."""
if value == self . _defaults [ 'resultCode' ] and 'resultCode' in self . _values : del self . _values [ 'resultCode' ] else : self . _values [ 'resultCode' ] = value
async def sound ( dev : Device , target , value ) : """Get or set sound settings ."""
if target and value : click . echo ( "Setting %s to %s" % ( target , value ) ) click . echo ( await dev . set_sound_settings ( target , value ) ) print_settings ( await dev . get_sound_settings ( ) )
def confd_state_cli_listen_ssh_ip ( self , ** kwargs ) : """Auto Generated Code"""
config = ET . Element ( "config" ) confd_state = ET . SubElement ( config , "confd-state" , xmlns = "http://tail-f.com/yang/confd-monitoring" ) cli = ET . SubElement ( confd_state , "cli" ) listen = ET . SubElement ( cli , "listen" ) ssh = ET . SubElement ( listen , "ssh" ) ip = ET . SubElement ( ssh , "ip" ) ip . text...
def _get_site_amplification ( self , C_AMP , vs30 , pga_rock ) : """Gets the site amplification term based on equations 7 and 8 of Atkinson & Boore ( 2006)"""
# Get nonlinear term bnl = self . _get_bnl ( C_AMP , vs30 ) f_nl_coeff = np . log ( 60.0 / 100.0 ) * np . ones_like ( vs30 ) idx = pga_rock > 60.0 f_nl_coeff [ idx ] = np . log ( pga_rock [ idx ] / 100.0 ) return np . log ( np . exp ( C_AMP [ "blin" ] * np . log ( vs30 / self . CONSTS [ "Vref" ] ) + bnl * f_nl_coeff ) ...
def _scanDataFiles ( self , dataDir , patterns ) : """Scans the specified directory for files with the specified globbing pattern and calls self . _ addDataFile for each . Raises an EmptyDirException if no data files are found ."""
numDataFiles = 0 for pattern in patterns : scanPath = os . path . join ( dataDir , pattern ) for filename in glob . glob ( scanPath ) : self . _addDataFile ( filename ) numDataFiles += 1 if numDataFiles == 0 : raise exceptions . EmptyDirException ( dataDir , patterns )
def fit ( self , X , y = None , ** kwargs ) : """Determine transformation parameters from data in X . Subsequent calls to ` transform ( Y ) ` compute the pairwise distance to ` X ` . Parameters of the clinical kernel are only updated if ` fit _ once ` is ` False ` , otherwise you have to explicitly call `...
if X . ndim != 2 : raise ValueError ( "expected 2d array, but got %d" % X . ndim ) if self . fit_once : self . X_fit_ = X else : self . _prepare_by_column_dtype ( X ) return self
def verify ( conf , input_requirements_filename ) : """Verifying that given requirements file is not missing any pins args : input _ requirements _ filename : requriements file to verify"""
exit_if_file_not_exists ( input_requirements_filename , conf ) cireqs . check_if_requirements_are_up_to_date ( requirements_filename = input_requirements_filename , ** conf . _asdict ( ) ) click . echo ( click . style ( '✓' , fg = 'green' ) + " {} has been verified" . format ( input_requirements_filename ) )
def close ( self ) : """Closes the stream ."""
if self . call is None : return self . _request_queue . put ( None ) self . call . cancel ( ) self . _request_generator = None
def create_col_nums ( ) : """Return column numbers and letters that repeat up to NUM _ REPEATS . I . e . , NUM _ REPEATS = 2 would return a list of 26 * 26 = 676 2 - tuples ."""
NUM_REPEATS = 2 column_letters = list ( string . ascii_uppercase ) + map ( '' . join , itertools . product ( string . ascii_uppercase , repeat = NUM_REPEATS ) ) letter_numbers = [ ] count = 1 for letter in column_letters : letter_numbers . append ( ( count , str ( count ) + ' (' + letter + ')' ) ) count += 1 re...
def main ( ) : """NAME plot _ magmap . py DESCRIPTION makes a color contour map of desired field model SYNTAX plot _ magmap . py [ command line options ] OPTIONS - h prints help and quits - f FILE specify field model file with format : l m g h - fmt [ pdf , eps , svg , png ] specify format for out...
cmap = 'RdYlBu' date = 2016. if not Basemap : print ( "-W- Cannot access the Basemap module, which is required to run plot_magmap.py" ) sys . exit ( ) dir_path = '.' lincr = 1 # level increment for contours if '-WD' in sys . argv : ind = sys . argv . index ( '-WD' ) dir_path = sys . argv [ ind + 1 ] if ...
def __read_developer_settings ( self ) : """Читает конфигурации разработчика с локальной машины или из переменных окружения При этом переменная окружения приоритетнее : return :"""
self . developer_settings = read_developer_settings ( ) if not self . developer_settings : self . log . warning ( "НЕ УСТАНОВЛЕНЫ настройки разработчика, это может приводить к проблемам в дальнейшей работе!" )
def parse_stack ( self , global_params , region , stack ) : """Parse a single stack and fetch additional attributes : param global _ params : Parameters shared for all regions : param region : Name of the AWS region : param stack _ url : URL of the AWS stack"""
stack [ 'id' ] = stack . pop ( 'StackId' ) stack [ 'name' ] = stack . pop ( 'StackName' ) stack_policy = api_clients [ region ] . get_stack_policy ( StackName = stack [ 'name' ] ) if 'StackPolicyBody' in stack_policy : stack [ 'policy' ] = json . loads ( stack_policy [ 'StackPolicyBody' ] ) self . stacks [ stack [ ...
def reorient_z ( structure ) : """reorients a structure such that the z axis is concurrent with the normal to the A - B plane"""
struct = structure . copy ( ) sop = get_rot ( struct ) struct . apply_operation ( sop ) return struct
def _process_change ( self , payload , user , repo , repo_url , event , codebase = None ) : """Consumes the JSON as a python object and actually starts the build . : arguments : payload Python Object that represents the JSON sent by GitLab Service Hook ."""
changes = [ ] refname = payload [ 'ref' ] # project name from http headers is empty for me , so get it from repository / name project = payload [ 'repository' ] [ 'name' ] # We only care about regular heads or tags match = re . match ( r"^refs/(heads|tags)/(.+)$" , refname ) if not match : log . msg ( "Ignoring ref...
def has_access ( self , permission_name , view_name ) : """Check if current user or public has access to view or menu"""
if current_user . is_authenticated : return self . _has_view_access ( g . user , permission_name , view_name ) elif current_user_jwt : return self . _has_view_access ( current_user_jwt , permission_name , view_name ) else : return self . is_item_public ( permission_name , view_name )
def _raise_for_status ( response ) : """Raises stored : class : ` HTTPError ` , if one occurred . This is the : meth : ` requests . models . Response . raise _ for _ status ` method , modified to add the response from Space - Track , if given ."""
http_error_msg = '' if 400 <= response . status_code < 500 : http_error_msg = '%s Client Error: %s for url: %s' % ( response . status_code , response . reason , response . url ) elif 500 <= response . status_code < 600 : http_error_msg = '%s Server Error: %s for url: %s' % ( response . status_code , response . ...
def show_report ( self ) : """Show report ."""
self . action_show_report . setEnabled ( False ) self . action_show_log . setEnabled ( True ) self . load_html_file ( self . report_path )
def to_before_pedalboard ( self ) : """Change the current : class : ` . Pedalboard ` for the previous pedalboard . If the current pedalboard is the first in the current : class : ` Bank ` , the current pedalboard is will be the * * last of the current Bank * * . . . warning : : If the current : attr : ` . p...
if self . pedalboard is None : raise CurrentPedalboardError ( 'The current pedalboard is None' ) before_index = self . pedalboard . index - 1 if before_index == - 1 : before_index = len ( self . bank . pedalboards ) - 1 self . set_pedalboard ( self . bank . pedalboards [ before_index ] )
async def do_cmd ( self , * args , success = None ) : """Sends the given command to the server . Args : * args : Command and arguments to be sent to the server . Raises : ConnectionResetError : If the connection with the server is unexpectedely lost . SMTPCommandFailedError : If the command fails . Re...
if success is None : success = ( 250 , ) cmd = " " . join ( args ) await self . writer . send_command ( cmd ) code , message = await self . reader . read_reply ( ) if code not in success : raise SMTPCommandFailedError ( code , message , cmd ) return code , message
def solveAgents ( self ) : '''Solves the microeconomic problem for all AgentTypes in this market . Parameters None Returns None'''
# for this _ type in self . agents : # this _ type . solve ( ) try : multiThreadCommands ( self . agents , [ 'solve()' ] ) except Exception as err : if self . print_parallel_error_once : # Set flag to False so this is only printed once . self . print_parallel_error_once = False print ( "**** WAR...
def property_value ( self , io_handler , name ) : """Prints the value of the given property , looking into framework properties then environment variables ."""
value = self . _context . get_property ( name ) if value is None : # Avoid printing " None " value = "" io_handler . write_line ( str ( value ) )
def is_avro ( path_or_buffer ) : """Return True if path ( or buffer ) points to an Avro file . Parameters path _ or _ buffer : path to file or file - like object Path to file"""
if is_str ( path_or_buffer ) : fp = open ( path_or_buffer , 'rb' ) close = True else : fp = path_or_buffer close = False try : header = fp . read ( len ( MAGIC ) ) return header == MAGIC finally : if close : fp . close ( )
def sample_to ( self , count , skip_header_rows , strategy , target ) : """Sample rows from GCS or local file and save results to target file . Args : count : number of rows to sample . If strategy is " BIGQUERY " , it is used as approximate number . skip _ header _ rows : whether to skip first row when readi...
# TODO ( qimingj ) Add unit test # Read data from source into DataFrame . if sys . version_info . major > 2 : xrange = range # for python 3 compatibility if strategy == 'BIGQUERY' : import datalab . bigquery as bq if not self . path . startswith ( 'gs://' ) : raise Exception ( 'Cannot use BIGQUERY i...
def _get_sector ( self , channel , nlines , ncols ) : """Determine which sector was scanned"""
if self . _is_vis ( channel ) : margin = 100 sectors_ref = self . vis_sectors else : margin = 50 sectors_ref = self . ir_sectors for ( nlines_ref , ncols_ref ) , sector in sectors_ref . items ( ) : if np . fabs ( ncols - ncols_ref ) < margin and np . fabs ( nlines - nlines_ref ) < margin : r...
def remover ( self , id_script_type ) : """Remove Script Type from by the identifier . : param id _ script _ type : Identifier of the Script Type . Integer value and greater than zero . : return : None : raise InvalidParameterError : The identifier of Script Type is null and invalid . : raise TipoRoteiroNao...
if not is_valid_int_param ( id_script_type ) : raise InvalidParameterError ( u'The identifier of Script Type is invalid or was not informed.' ) url = 'scripttype/' + str ( id_script_type ) + '/' code , xml = self . submit ( None , 'DELETE' , url ) return self . response ( code , xml )
def vcf_line ( input_data , reference ) : """Convert the var files information into VCF format . This is nontrivial because the var file can contain zero - length variants , which is not allowed by VCF . To handle these cases , we " move backwards " by one position , look up the reference sequence , and add t...
vcf_data = VCF_DATA_TEMPLATE . copy ( ) start = int ( input_data [ 'start' ] ) dbsnp_data = input_data [ 'dbsnp_data' ] ref_allele = input_data [ 'ref_seq' ] genome_alleles = input_data [ 'alleles' ] # Get dbSNP IDs . dbsnp_cleaned = [ ] for dbsnp in dbsnp_data : if dbsnp not in dbsnp_cleaned : dbsnp_cleane...
def set ( self , attribute , specification , exact = False ) : """Set the named attribute from the specification given by the user . The value actually set may be different ."""
assert isinstance ( attribute , basestring ) assert isinstance ( exact , ( int , bool ) ) if __debug__ and not exact : if attribute == 'requirements' : assert ( isinstance ( specification , property_set . PropertySet ) or all ( isinstance ( s , basestring ) for s in specification ) ) elif attribute in (...
def date_range_builder ( self , start = '2013-02-11' , end = None ) : """Builds date range query . : param start : Date string . format : YYYY - MM - DD : type start : String : param end : date string . format : YYYY - MM - DD : type end : String : returns : String"""
if not end : end = time . strftime ( '%Y-%m-%d' ) return 'acquisitionDate:[%s+TO+%s]' % ( start , end )
def _escape_regexp ( s ) : """escape characters with specific regexp use"""
return ( str ( s ) . replace ( '|' , '\\|' ) . replace ( '.' , '\.' ) # ` . ` has to be replaced before ` * ` . replace ( '*' , '.*' ) . replace ( '+' , '\+' ) . replace ( '(' , '\(' ) . replace ( ')' , '\)' ) . replace ( '$' , '\\$' ) )
def receive_message ( self , operation , request_id ) : """Receive a raw BSON message or raise ConnectionFailure . If any exception is raised , the socket is closed ."""
try : return receive_message ( self . sock , operation , request_id , self . max_message_size ) except BaseException as error : self . _raise_connection_failure ( error )
def nltk_tokenize_words ( string , attached_period = False , language = None ) : """Wrap NLTK ' s tokenizer PunktLanguageVars ( ) , but make final period its own token . > > > nltk _ tokenize _ words ( " Sentence 1 . Sentence 2 . " ) [ ' Sentence ' , ' 1 ' , ' . ' , ' Sentence ' , ' 2 ' , ' . ' ] > > > # Op...
assert isinstance ( string , str ) , "Incoming string must be type str." if language == 'sanskrit' : periods = [ '.' , '।' , '॥' ] else : periods = [ '.' ] punkt = PunktLanguageVars ( ) tokens = punkt . word_tokenize ( string ) if attached_period : return tokens new_tokens = [ ] for word in tokens : for...
def get_random_areanote ( zone ) : """省份行政区划代码 , 返回下辖的随机地区名称 : param : * zone : ( string ) 省份行政区划代码 比如 ' 310000' : returns : * random _ areanote : ( string ) 省份下辖随机地区名称 举例如下 : : print ( ' - - - fish _ data get _ random _ areanote demo - - - ' ) print ( cardbin _ get _ bank _ by _ name ( 310000 ) ) p...
# 获取省份下的地区信息 province = str ( zone ) [ : 2 ] areanote_list = IdCard . get_areanote_info ( province ) # 选出省份名称 province_name_list = [ item for item in areanote_list if item [ 0 ] == str ( zone ) ] if not ( areanote_list and province_name_list ) : raise ValueError ( 'zone error, please check and try again' ) # 只选取下辖区...
def func_quantiles ( node , qlist = ( .025 , .25 , .5 , .75 , .975 ) ) : """Returns an array whose ith row is the q [ i ] th quantile of the function . : Arguments : func _ stacks : The samples of the function . func _ stacks [ i , : ] gives sample i . qlist : A list or array of the quantiles you would li...
# For very large objects , this will be rather long . # Too get the length of the table , use obj . trace . length ( ) if isinstance ( node , Variable ) : func_stacks = node . trace ( ) else : func_stacks = node if any ( qlist < 0. ) or any ( qlist > 1. ) : raise TypeError ( 'The elements of qlist must be b...
def triplifyGML ( dpath = "../data/fb/" , fname = "foo.gdf" , fnamei = "foo_interaction.gdf" , fpath = "./fb/" , scriptpath = None , uid = None , sid = None , fb_link = None , ego = True , umbrella_dir = None ) : """Produce a linked data publication tree from a standard GML file . INPUTS : = > the data director...
c ( "iniciado tripgml" ) if sum ( c . isdigit ( ) for c in fname ) == 4 : year = re . findall ( r".*(\d\d\d\d).gml" , fname ) [ 0 ] [ 0 ] B . datetime_snapshot = datetime . date ( * [ int ( i ) for i in ( year ) ] ) if sum ( c . isdigit ( ) for c in fname ) == 12 : day , month , year , hour , minute = re . ...
def jacobi_prolongation_smoother ( S , T , C , B , omega = 4.0 / 3.0 , degree = 1 , filter = False , weighting = 'diagonal' ) : """Jacobi prolongation smoother . Parameters S : csr _ matrix , bsr _ matrix Sparse NxN matrix used for smoothing . Typically , A . T : csr _ matrix , bsr _ matrix Tentative prol...
# preprocess weighting if weighting == 'block' : if sparse . isspmatrix_csr ( S ) : weighting = 'diagonal' elif sparse . isspmatrix_bsr ( S ) : if S . blocksize [ 0 ] == 1 : weighting = 'diagonal' if filter : # Implement filtered prolongation smoothing for the general case by # utili...
def is_str ( arg ) : '''is _ str ( x ) yields True if x is a string object or a 0 - dim numpy array of a string and yields False otherwise .'''
return ( isinstance ( arg , six . string_types ) or is_npscalar ( arg , 'string' ) or is_npvalue ( arg , 'string' ) )
def dict_to_body ( star_dict ) : """Converts a dictionary of variable star data to a ` Body ` instance . Requires ` PyEphem < http : / / rhodesmill . org / pyephem / > ` _ to be installed ."""
if ephem is None : # pragma : no cover raise NotImplementedError ( "Please install PyEphem in order to use dict_to_body." ) body = ephem . FixedBody ( ) body . name = star_dict [ 'name' ] body . _ra = ephem . hours ( str ( star_dict [ 'ra' ] ) ) body . _dec = ephem . degrees ( str ( star_dict [ 'dec' ] ) ) body . _...
def handle_response ( self , ts , resp ) : """Passes a response message to the corresponding event handler , and also takes care of handling errors raised by the _ raise _ error handler . : param ts : timestamp , declares when data was received by the client : param resp : dict , containing info or error keys...
log . info ( "handle_response: Handling response %s" , resp ) event = resp [ 'event' ] try : self . _event_handlers [ event ] ( ts , ** resp ) # Handle Non - Critical Errors except ( InvalidChannelError , InvalidPairError , InvalidBookLengthError , InvalidBookPrecisionError ) as e : log . exception ( e ) pr...
def obj_with_unit ( obj , unit ) : """Returns a ` FloatWithUnit ` instance if obj is scalar , a dictionary of objects with units if obj is a dict , else an instance of ` ArrayWithFloatWithUnit ` . Args : unit : Specific units ( eV , Ha , m , ang , etc . ) ."""
unit_type = _UNAME2UTYPE [ unit ] if isinstance ( obj , numbers . Number ) : return FloatWithUnit ( obj , unit = unit , unit_type = unit_type ) elif isinstance ( obj , collections . Mapping ) : return { k : obj_with_unit ( v , unit ) for k , v in obj . items ( ) } else : return ArrayWithUnit ( obj , unit = ...
def bytes ( self ) : """Returns a t - uple with instruction bytes ( integers )"""
result = [ ] op = self . opcode . split ( ' ' ) argi = 0 while op : q = op . pop ( 0 ) if q == 'XX' : for k in range ( self . argbytes [ argi ] - 1 ) : op . pop ( 0 ) result . extend ( num2bytes ( self . argval ( ) [ argi ] , self . argbytes [ argi ] ) ) argi += 1 else : ...
def timing ( function ) : '''Decorator wrapper to log execution time , for profiling purposes'''
@ wraps ( function ) def wrapped ( * args , ** kwargs ) : start_time = time . time ( ) ret = function ( * args , ** salt . utils . args . clean_kwargs ( ** kwargs ) ) end_time = time . time ( ) if function . __module__ . startswith ( 'salt.loaded.int.' ) : mod_name = function . __module__ [ 16 :...
def searchAccession ( acc ) : """attempt to use NCBI Entrez to get BioSample ID"""
# try genbank file # genome database out , error = entrez ( 'genome' , acc ) for line in out . splitlines ( ) : line = line . decode ( 'ascii' ) . strip ( ) if 'Assembly_Accession' in line or 'BioSample' in line : newAcc = line . split ( '>' ) [ 1 ] . split ( '<' ) [ 0 ] . split ( '.' ) [ 0 ] . split ( ...
def attach_model ( subscription , rgname , vmssvm_model , diskname , lun ) : '''Attach a data disk to a VMSS VM model'''
disk_id = '/subscriptions/' + subscription + '/resourceGroups/' + rgname + '/providers/Microsoft.Compute/disks/' + diskname disk_model = { 'lun' : lun , 'createOption' : 'Attach' , 'caching' : 'None' , 'managedDisk' : { 'storageAccountType' : 'Standard_LRS' , 'id' : disk_id } } vmssvm_model [ 'properties' ] [ 'storageP...
def console_save_xp ( con : tcod . console . Console , filename : str , compress_level : int = 9 ) -> bool : """Save a console to a REXPaint ` . xp ` file ."""
return bool ( lib . TCOD_console_save_xp ( _console ( con ) , filename . encode ( "utf-8" ) , compress_level ) )
def run_nb ( config , path = None ) : """Run a notebook file . Runs the one specified by the config file , or the one at the location specificed by ' path ' ."""
if path is None : path = os . getcwd ( ) root = config . get ( 'root' , 'path' ) root = os . path . join ( path , root ) nb_name = config . get ( 'misc' , 'nb-name' ) nb_path = os . path . join ( root , '%s.ipynb' % nb_name ) if not os . path . exists ( nb_path ) : print ( ( "No notebook found at %s. " "Create ...
def error ( self , msgid , error ) : """Handle a error message ."""
self . requests [ msgid ] . errback ( error ) del self . requests [ msgid ]
def GET_prices_name ( self , path_info , name ) : """Get the price for a name in a namespace Reply the price as { ' name _ price ' : { ' amount ' : str ( . . . ) , ' units ' : str ( . . . ) } } ( also , ' satoshis ' : . . . if the name is in BT ) Reply 404 if the namespace doesn ' t exist Reply 502 if we can ...
if not check_name ( name ) : return self . _reply_json ( { 'error' : 'Invalid name' } , status_code = 400 ) blockstackd_url = get_blockstackd_url ( ) price_info = blockstackd_client . get_name_cost ( name , hostport = blockstackd_url ) if json_is_error ( price_info ) : # error status_code = price_info . get ( '...
def _apk_analysis ( self ) : """Run analysis on the APK file . This method is usually called by _ _ init _ _ except if skip _ analysis is False . It will then parse the AndroidManifest . xml and set all fields in the APK class which can be extracted from the Manifest ."""
i = "AndroidManifest.xml" try : manifest_data = self . zip . read ( i ) except KeyError : log . warning ( "Missing AndroidManifest.xml. Is this an APK file?" ) else : ap = AXMLPrinter ( manifest_data ) if not ap . is_valid ( ) : log . error ( "Error while parsing AndroidManifest.xml - is the fil...
def replaceint ( fname , replacewith = '%s' ) : """replace int in lst"""
words = fname . split ( ) for i , word in enumerate ( words ) : try : word = int ( word ) words [ i ] = replacewith except ValueError : pass return ' ' . join ( words )
def delete ( self ) : """Explicit destructor of the internal SAT oracle and all the totalizer objects creating during the solving process ."""
if self . oracle : self . oracle . delete ( ) self . oracle = None if self . solver != 'mc' : # for minicard , there is nothing to free for t in six . itervalues ( self . tobj ) : t . delete ( )
def stem ( self , word ) : """Stem the word if it has more than two characters , otherwise return it as is ."""
if len ( word ) <= 2 : return word else : word = self . remove_initial_apostrophe ( word ) word = self . set_ys ( word ) self . find_regions ( word ) word = self . strip_possessives ( word ) word = self . replace_suffixes_1 ( word ) word = self . replace_suffixes_2 ( word ) word = self ....
def generate_data ( self , data_dir , tmp_dir , task_id = - 1 ) : """The function generating the data ."""
filepath_fns = { problem . DatasetSplit . TRAIN : self . training_filepaths , problem . DatasetSplit . EVAL : self . dev_filepaths , problem . DatasetSplit . TEST : self . test_filepaths , } # We set shuffled = True as we don ' t want to shuffle on disk later . split_paths = [ ( split [ "split" ] , filepath_fns [ split...
def set_state ( self , vid , value = None , default = False , disable = False ) : """Configures the VLAN state EosVersion : 4.13.7M Args : vid ( str ) : The VLAN ID to configure value ( str ) : The value to set the vlan state to default ( bool ) : Configures the vlan state to its default value disable...
cmds = self . command_builder ( 'state' , value = value , default = default , disable = disable ) return self . configure_vlan ( vid , cmds )
def river_sources ( world , water_flow , water_path ) : """Find places on map where sources of river can be found"""
river_source_list = [ ] # Using the wind and rainfall data , create river ' seeds ' by # flowing rainfall along paths until a ' flow ' threshold is reached # and we have a beginning of a river . . . trickle - > stream - > river - > sea # step one : Using flow direction , follow the path for each cell # adding the previ...
def grouped ( self ) : """Yield the matches grouped by their final state in the automaton , i . e . structurally identical patterns only differing in constraints will be yielded together . Each group is yielded as a list of tuples consisting of a pattern and a match substitution . Yields : The grouped match...
for _ in self . _match ( self . matcher . root ) : yield list ( self . _internal_iter ( ) )
def within ( self , version ) : """A single version can also be interpreted as an open range ( i . e . no maximum version )"""
if not isinstance ( version , Version ) : version = type ( self . _min_ver ) ( self . _req , version ) return version >= self
def _reduce ( self ) : """Reduce data from multiple context to cpu ."""
ctx = context . cpu ( ) if self . _stype == 'default' : block = self . list_data ( ) data = ndarray . add_n ( * ( w . copyto ( ctx ) for w in block ) ) / len ( block ) else : # fetch all rows for ' row _ sparse ' param all_row_ids = ndarray . arange ( 0 , self . shape [ 0 ] , dtype = 'int64' , ctx = ctx ) ...
def ensure_dir ( d ) : """Check to make sure the supplied directory path does not exist , if so , create it . The method catches OSError exceptions and returns a descriptive message instead of re - raising the error . : type d : str : param d : It is the full path to a directory . : return : Does not retu...
if not os . path . exists ( d ) : try : os . makedirs ( d ) except OSError as oe : # should not happen with os . makedirs # ENOENT : No such file or directory if os . errno == errno . ENOENT : msg = twdd ( """One or more directories in the path ({}) do not exist. If ...
def access_id ( self , id_ , lineno , scope = None , default_type = None , default_class = CLASS . unknown ) : """Access a symbol by its identifier and checks if it exists . If not , it ' s supposed to be an implicit declared variable . default _ class is the class to use in case of an undeclared - implicit - a...
if isinstance ( default_type , symbols . BASICTYPE ) : default_type = symbols . TYPEREF ( default_type , lineno , implicit = False ) assert default_type is None or isinstance ( default_type , symbols . TYPEREF ) if not check_is_declared_explicit ( lineno , id_ ) : return None result = self . get_entry ( id_ , s...
def thumbnails_for_file ( relative_source_path , root = None , basedir = None , subdir = None , prefix = None ) : """Return a list of dictionaries , one for each thumbnail belonging to the source image . The following list explains each key of the dictionary : ` filename ` - - absolute thumbnail path ` x ` ...
if root is None : root = settings . MEDIA_ROOT if prefix is None : prefix = settings . THUMBNAIL_PREFIX if subdir is None : subdir = settings . THUMBNAIL_SUBDIR if basedir is None : basedir = settings . THUMBNAIL_BASEDIR source_dir , filename = os . path . split ( relative_source_path ) thumbs_path = os...
def merge_files ( configuration , locale , fail_if_missing = True ) : """Merge all the files in ` locale ` , as specified in config . yaml ."""
for target , sources in configuration . generate_merge . items ( ) : merge ( configuration , locale , target , sources , fail_if_missing )
def format_obj_name ( obj , delim = "<>" ) : """Formats the object name in a pretty way @ obj : any python object @ delim : the characters to wrap a parent object name in - > # str formatted name from vital . debug import format _ obj _ name format _ obj _ name ( vital . debug . Timer ) # - > ' Timer < ...
pname = "" parent_name = get_parent_name ( obj ) if parent_name : pname = "{}{}{}" . format ( delim [ 0 ] , get_parent_name ( obj ) , delim [ 1 ] ) return "{}{}" . format ( get_obj_name ( obj ) , pname )
def construct ( arg ) : '''Shortcut syntax to define trafarets . - int , str , float and bool will return t . Int , t . String , t . Float and t . Bool - one element list will return t . List - tuple or list with several args will return t . Tuple - dict will return t . Dict . If key has ' ? ' at the and it...
if isinstance ( arg , t . Trafaret ) : return arg elif isinstance ( arg , tuple ) or ( isinstance ( arg , list ) and len ( arg ) > 1 ) : return t . Tuple ( * ( construct ( a ) for a in arg ) ) elif isinstance ( arg , list ) : # if len ( arg ) = = 1 return t . List ( construct ( arg [ 0 ] ) ) elif isinstance...
def f1_with_flattening ( estimator , X , y ) : """Calculate F1 score by flattening the predictions of the estimator across all sequences . For example , given the following address sequences as input [ ' 1 My str ' , ' 2 Your blvd ' ] , the predictions of the model will be flattened like so : [ ' AddressN...
predicted = estimator . predict ( X ) flat_pred , flat_gold = [ ] , [ ] for a , b in zip ( predicted , y ) : if len ( a ) == len ( b ) : flat_pred . extend ( a ) flat_gold . extend ( b ) return f1_score ( flat_gold , flat_pred )
import math def compute_tetrahedron_area ( edge_length ) : """Function to calculate the surface area of a tetrahedron . Examples : compute _ tetrahedron _ area ( 3 ) - > 15.588457268119894 compute _ tetrahedron _ area ( 20 ) - > 692.8203230275509 compute _ tetrahedron _ area ( 10 ) - > 173.20508075688772 ...
surface_area = math . sqrt ( 3 ) * ( edge_length ** 2 ) return surface_area
def handle_signature ( self , sig , signode ) : """Create a signature for this thing ."""
if sig != 'Configuration' : signode . clear ( ) # Add " component " which is the type of this thing signode += addnodes . desc_annotation ( 'component ' , 'component ' ) if '.' in sig : modname , clsname = sig . rsplit ( '.' , 1 ) else : modname , clsname = '' , sig # If there ' ...
def get_last_scene_time ( self , refresh = False ) : """Get last scene time . Refresh data from Vera if refresh is True , otherwise use local cache . Refresh is only needed if you ' re not using subscriptions ."""
if refresh : self . refresh_complex_value ( 'LastSceneTime' ) val = self . get_complex_value ( 'LastSceneTime' ) return val
def __makeattr ( self , name ) : """lazily compute value for name or raise AttributeError if unknown ."""
# print " makeattr " , self . _ _ name _ _ , name target = None if '__onfirstaccess__' in self . __map__ : target = self . __map__ . pop ( '__onfirstaccess__' ) importobj ( * target ) ( ) try : modpath , attrname = self . __map__ [ name ] except KeyError : if target is not None and name != '__onfirstacc...
def get_meta_fields ( self , fields , kwargs = { } ) : '''Return a dictionary of metadata fields'''
fields = to_list ( fields ) meta = self . get_meta ( ) return { field : meta . get ( field ) for field in fields }
def simxGetIntegerSignal ( clientID , signalName , operationMode ) : '''Please have a look at the function description / documentation in the V - REP user manual'''
signalValue = ct . c_int ( ) if ( sys . version_info [ 0 ] == 3 ) and ( type ( signalName ) is str ) : signalName = signalName . encode ( 'utf-8' ) return c_GetIntegerSignal ( clientID , signalName , ct . byref ( signalValue ) , operationMode ) , signalValue . value
def read_file ( cls , filepath ) : """Decodes bencoded data of a given file . Returns decoded structure ( s ) . : param str filepath : : rtype : list"""
with open ( filepath , mode = 'rb' ) as f : contents = f . read ( ) return cls . decode ( contents )
def laser_mirrors ( rows , cols , mir ) : """Orienting mirrors to allow reachability by laser beam : param int rows : : param int cols : rows and cols are the dimension of the grid : param mir : list of mirror coordinates , except mir [ 0 ] = laser entrance , mir [ - 1 ] = laser exit . : complexity : : ...
# build structures n = len ( mir ) orien = [ None ] * ( n + 2 ) orien [ n ] = 0 # arbitrary orientations orien [ n + 1 ] = 0 succ = [ [ None for direc in range ( 4 ) ] for i in range ( n + 2 ) ] L = [ ( mir [ i ] [ 0 ] , mir [ i ] [ 1 ] , i ) for i in range ( n ) ] L . append ( ( 0 , - 1 , n ) ) # enter L . append ( ( ...
def drop_capabilities ( keep = [ ] ) : """Drop all capabilities this process has . @ param keep : list of capabilities to not drop"""
capdata = ( libc . CapData * 2 ) ( ) for cap in keep : capdata [ 0 ] . effective |= ( 1 << cap ) capdata [ 0 ] . permitted |= ( 1 << cap ) libc . capset ( ctypes . byref ( libc . CapHeader ( version = libc . LINUX_CAPABILITY_VERSION_3 , pid = 0 ) ) , ctypes . byref ( capdata ) )
def lvscan ( self ) : """Probes the volume group for logical volumes and returns a list of LogicalVolume instances : : from lvm2py import * lvm = LVM ( ) vg = lvm . get _ vg ( " myvg " ) lvs = vg . lvscan ( ) * Raises : * * HandleError"""
self . open ( ) lv_list = [ ] lv_handles = lvm_vg_list_lvs ( self . handle ) if not bool ( lv_handles ) : return lv_list lvh = dm_list_first ( lv_handles ) while lvh : c = cast ( lvh , POINTER ( lvm_lv_list ) ) lv = LogicalVolume ( self , lvh = c . contents . lv ) lv_list . append ( lv ) if dm_list_...
def _process ( self , startblock ) : """Processesing method ."""
log . debug ( "Processing blocks %d to %d" % ( startblock , startblock + BATCH_SIZE ) ) addresses = [ ] for blockNum in range ( startblock , startblock + BATCH_SIZE ) : block_hash = self . db . reader . _get_block_hash ( blockNum ) if block_hash is not None : receipts = self . db . reader . _get_block_r...
def matches ( self , filter , layer = Layer . NETWORK ) : """Evaluates the packet against the given packet filter string . The remapped function is : : BOOL WinDivertHelperEvalFilter ( _ _ in const char * filter , _ _ in WINDIVERT _ LAYER layer , _ _ in PVOID pPacket , _ _ in UINT packetLen , _ _ in P...
buff , buff_ = self . __to_buffers ( ) return windivert_dll . WinDivertHelperEvalFilter ( filter . encode ( ) , layer , ctypes . byref ( buff_ ) , len ( self . raw ) , ctypes . byref ( self . wd_addr ) )
def blame ( channel , rest , nick ) : "Pass the buck !"
if rest : blamee = rest else : blamee = channel karma . Karma . store . change ( nick , - 1 ) if random . randint ( 1 , 10 ) == 1 : yield "/me jumps atop the chair and points back at %s." % nick yield ( "stop blaming the world for your problems, you bitter, " "two-faced sissified monkey!" ) else : y...
def add_to_submenu ( self , submenu_path , item ) : '''add an item to a submenu using a menu path array'''
if len ( submenu_path ) == 0 : self . add ( item ) return for m in self . items : if isinstance ( m , MPMenuSubMenu ) and submenu_path [ 0 ] == m . name : m . add_to_submenu ( submenu_path [ 1 : ] , item ) return self . add ( MPMenuSubMenu ( submenu_path [ 0 ] , [ ] ) ) self . add_to_submenu...
def data ( self ) : """Get parsed DATA segment of the FCS file ."""
if self . _data is None : with open ( self . path , 'rb' ) as f : self . read_data ( f ) return self . _data
def sse ( mean , estimator ) : """Description : Calculates the Sum of Squared Errors ( SSE ) of an estimation on flat numpy ndarrays . Parameters : mean : actual value ( numpy ndarray ) estimator : estimated value of the mean ( numpy ndarray )"""
return np . sum ( ( np . asarray ( estimator ) - np . asarray ( mean ) ) ** 2 , axis = 0 )
def load_data ( self , filename , * args , ** kwargs ) : """Load parameters from Excel spreadsheet . : param filename : Name of Excel workbook with data . : type filename : str : returns : Data read from Excel workbook . : rtype : dict"""
# workbook read from file workbook = open_workbook ( filename , verbosity = True ) data = { } # an empty dictionary to store data # iterate through sheets in parameters # iterate through the parameters on each sheet for param , pval in self . parameters . iteritems ( ) : sheet = pval [ 'extras' ] [ 'sheet' ] # ...
def annotation_rows ( prefix , annotations ) : """Helper function to extract N : and C : rows from annotations and pad their values"""
ncol = len ( annotations [ 'Column Name' ] ) return { name . replace ( prefix , '' , 1 ) : values + [ '' ] * ( ncol - len ( values ) ) for name , values in annotations . items ( ) if name . startswith ( prefix ) }
def prog_callback ( prog , msg ) : """Program callback , calls prog with message in stdin"""
pipe = Popen ( prog , stdin = PIPE ) data = json . dumps ( msg ) pipe . stdin . write ( data . encode ( 'utf-8' ) ) pipe . stdin . close ( )
def updatej9DB ( dbname = abrevDBname , saveRawHTML = False ) : """Updates the database of Journal Title Abbreviations . Requires an internet connection . The data base is saved relative to the source file not the working directory . # Parameters _ dbname _ : ` optional [ str ] ` > The name of the database fi...
if saveRawHTML : rawDir = '{}/j9Raws' . format ( os . path . dirname ( __file__ ) ) if not os . path . isdir ( rawDir ) : os . mkdir ( rawDir ) _j9SaveCurrent ( sDir = rawDir ) dbLoc = os . path . join ( os . path . normpath ( os . path . dirname ( __file__ ) ) , dbname ) try : with dbm . dumb ....
def parse_args ( ) : """Parses command line arguments ."""
parser = argparse . ArgumentParser ( description = 'Tool to download dataset images.' ) parser . add_argument ( '--input_file' , required = True , help = 'Location of dataset.csv' ) parser . add_argument ( '--output_dir' , required = True , help = 'Output path to download images' ) parser . add_argument ( '--threads' ,...
def _coords2index ( im , x , y , inverted = False ) : """Converts data coordinates to index coordinates of the array . Parameters im : An AxesImage instance The image artist to operation on x : number The x - coordinate in data coordinates . y : number The y - coordinate in data coordinates . invert...
xmin , xmax , ymin , ymax = im . get_extent ( ) if im . origin == 'upper' : ymin , ymax = ymax , ymin data_extent = mtransforms . Bbox ( [ [ ymin , xmin ] , [ ymax , xmax ] ] ) array_extent = mtransforms . Bbox ( [ [ 0 , 0 ] , im . get_array ( ) . shape [ : 2 ] ] ) trans = mtransforms . BboxTransformFrom ( data_ext...
def status_line ( self ) : """Returns a status line for an item . Only really interesting when called for a draft item as it can tell you if the draft is the same as another version ."""
date = self . date_published status = self . state . title ( ) if self . state == self . DRAFT : # Check if this item has changed since # our last publish status = "Draft saved" date = self . last_save if date and self . last_save == self . last_scheduled : # We need to figure out if the item it is based on...
def write_config ( cfg ) : '''try writing config file to a default directory'''
cfg_path = '/usr/local/etc/freelan' cfg_file = 'freelan_TEST.cfg' cfg_lines = [ ] if not isinstance ( cfg , FreelanCFG ) : if not isinstance ( cfg , ( list , tuple ) ) : print ( "Freelan write input can not be processed." ) return cfg_lines = cfg else : cfg_lines = cfg . build ( ) if not os ...
def active_repositories ( doc ) : """View for getting active repositories"""
if doc . get ( 'state' ) != 'deactivated' : for repository_id , repo in doc . get ( 'repositories' , { } ) . items ( ) : if repo . get ( 'state' ) != 'deactivated' : repo [ 'id' ] = repository_id repo [ 'organisation_id' ] = doc [ '_id' ] yield repository_id , repo
def umount ( self , forced = True ) : """Try to unmount our mount point . Defaults to using forced method . If OS is Linux , it will not delete the mount point . Args : forced : Bool whether to force the unmount . Default is True ."""
if self . is_mounted ( ) : if is_osx ( ) : cmd = [ "/usr/sbin/diskutil" , "unmount" , self . connection [ "mount_point" ] ] if forced : cmd . insert ( 2 , "force" ) subprocess . check_call ( cmd ) else : cmd = [ "umount" , self . connection [ "mount_point" ] ] ...
def queries_start_with ( queries , prefixes ) : """Check if any queries start with any item from * prefixes * ."""
for query in sqlparse . split ( queries ) : if query and query_starts_with ( query , prefixes ) is True : return True return False
def run_program ( program , args = None , ** subprocess_kwargs ) : """Run program in a separate process . NOTE : returns the process object created by ` subprocess . Popen ( ) ` . This can be used with ` proc . communicate ( ) ` for example . If ' shell ' appears in the kwargs , it must be False , otherwi...
if 'shell' in subprocess_kwargs and subprocess_kwargs [ 'shell' ] : raise ProgramError ( "This function is only for non-shell programs, " "use run_shell_command() instead." ) fullcmd = find_program ( program ) if not fullcmd : raise ProgramError ( "Program %s was not found" % program ) # As per subprocess , we ...
def prep_jid ( nocache = False , passed_jid = None ) : '''Call both with prep _ jid on all returners in multi _ returner TODO : finish this , what do do when you get different jids from 2 returners . . . since our jids are time based , this make this problem hard , because they aren ' t unique , meaning that ...
jid = passed_jid for returner_ in __opts__ [ CONFIG_KEY ] : if jid is None : jid = _mminion ( ) . returners [ '{0}.prep_jid' . format ( returner_ ) ] ( nocache = nocache ) else : r_jid = _mminion ( ) . returners [ '{0}.prep_jid' . format ( returner_ ) ] ( nocache = nocache ) if r_jid != ...
def lines ( self , encoding = None , errors = 'strict' , retain = True ) : r"""Open this file , read all lines , return them in a list . Optional arguments : ` encoding ` - The Unicode encoding ( or character set ) of the file . The default is ` ` None ` ` , meaning the content of the file is read as 8 - bi...
return self . text ( encoding , errors ) . splitlines ( retain )
def bounce_cluster ( name ) : '''Bounce all Traffic Server nodes in the cluster . Bouncing Traffic Server shuts down and immediately restarts Traffic Server , node - by - node . . . code - block : : yaml bounce _ ats _ cluster : trafficserver . bounce _ cluster'''
ret = { 'name' : name , 'changes' : { } , 'result' : None , 'comment' : '' } if __opts__ [ 'test' ] : ret [ 'comment' ] = 'Bouncing cluster' return ret __salt__ [ 'trafficserver.bounce_cluster' ] ( ) ret [ 'result' ] = True ret [ 'comment' ] = 'Bounced cluster' return ret