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def generate ( cls ) : """Generates a random : class : ` ~ PrivateKey ` object : rtype : : class : ` ~ PrivateKey `"""
return cls ( libnacl . randombytes ( PrivateKey . SIZE ) , encoder = encoding . RawEncoder )
def max_input_length ( self ) -> int : """Returns maximum input length for TranslatorInput objects passed to translate ( )"""
if self . source_with_eos : return self . _max_input_length - C . SPACE_FOR_XOS else : return self . _max_input_length
def values ( self ) : """A : class : ` werkzeug . datastructures . CombinedMultiDict ` that combines : attr : ` args ` and : attr : ` form ` ."""
args = [ ] for d in self . args , self . form : if not isinstance ( d , MultiDict ) : d = MultiDict ( d ) args . append ( d ) return CombinedMultiDict ( args )
def cli ( conf ) : """The fedora - messaging command line interface ."""
if conf : if not os . path . isfile ( conf ) : raise click . exceptions . BadParameter ( "{} is not a file" . format ( conf ) ) try : config . conf . load_config ( config_path = conf ) except exceptions . ConfigurationException as e : raise click . exceptions . BadParameter ( str ( e...
def send ( self , sender , recipients , cc = None , bcc = None , subject = '' , body = '' , attachments = None , content = 'text' ) : """Sends the email : param sender : The server of the message : param recipients : The recipients ( To : ) of the message : param cc : The CC recipients of the message : para...
if not self . connected : self . _logger . error ( ( 'Server not connected, cannot send message, ' 'please connect() first and disconnect() when ' 'the connection is not needed any more' ) ) return False try : message = Message ( sender , recipients , cc , bcc , subject , body , attachments , content ) ...
def _get_stddevs ( self , C , stddev_types , num_sites ) : """Return total standard deviation ."""
stddevs = [ ] for stddev_type in stddev_types : assert stddev_type in self . DEFINED_FOR_STANDARD_DEVIATION_TYPES stddevs . append ( np . log ( 10 ** C [ 'sigma' ] ) + np . zeros ( num_sites ) ) return stddevs
def _use_remote_connection ( self , kwargs ) : '''Determine if connection is local or remote'''
kwargs [ 'host' ] = kwargs . get ( 'host' ) kwargs [ 'username' ] = kwargs . get ( 'username' ) kwargs [ 'password' ] = kwargs . get ( 'password' ) if kwargs [ 'host' ] is None or kwargs [ 'username' ] is None or kwargs [ 'password' ] is None : return False else : return True
def _notify_unload_dll ( self , event ) : """Notify the unload of a module . @ warning : This method is meant to be used internally by the debugger . @ type event : L { UnloadDLLEvent } @ param event : Unload DLL event . @ rtype : bool @ return : C { True } to call the user - defined handle , C { False } ...
bCallHandler1 = _BreakpointContainer . _notify_unload_dll ( self , event ) bCallHandler2 = event . get_process ( ) . _notify_unload_dll ( event ) return bCallHandler1 and bCallHandler2
def split_content_version ( self ) : """Remove and return the version ( s ) from the cached content . First the internal version , and if versioning is activated , the template one . And finally save the content , but only if all versions match . The content saved is the encoded one ( if " compress " or " c...
try : nb_parts = 2 if self . options . versioning : nb_parts = 3 parts = self . content . split ( self . VERSION_SEPARATOR , nb_parts - 1 ) assert len ( parts ) == nb_parts self . content_internal_version = parts [ 0 ] if self . options . versioning : self . content_version = par...
def _build ( self , lexer ) : """Build : class : ` ~ ctfile . ctfile . Ctab ` instance . : return : : class : ` ~ ctfile . ctfile . Ctab ` instance . : rtype : : class : ` ~ ctfile . ctfile . Ctab ` ."""
atom_number = 1 while True : token = next ( lexer ) key = token . __class__ . __name__ if key == 'CtabCountsLine' : self [ key ] . update ( token . _asdict ( ) ) elif key == 'CtabAtomBlock' : self [ key ] . append ( Atom ( atom_number = str ( atom_number ) , ** token . _asdict ( ) ) ) ...
def authenticate_with_serviceaccount ( reactor , ** kw ) : """Create an ` ` IAgent ` ` which can issue authenticated requests to a particular Kubernetes server using a service account token . : param reactor : The reactor with which to configure the resulting agent . : param bytes path : The location of the s...
config = KubeConfig . from_service_account ( ** kw ) policy = https_policy_from_config ( config ) token = config . user [ "token" ] agent = HeaderInjectingAgent ( _to_inject = Headers ( { u"authorization" : [ u"Bearer {}" . format ( token ) ] } ) , _agent = Agent ( reactor , contextFactory = policy ) , ) return agent
def _rand1 ( self ) : "generate a single random sample"
Z = _unwhiten_cf ( self . _S_cf , self . _genA ( ) ) return Z . dot ( Z . T )
def validate_owner_repo ( ctx , param , value ) : """Ensure that owner / repo is formatted correctly ."""
# pylint : disable = unused - argument form = "OWNER/REPO" return validate_slashes ( param , value , minimum = 2 , maximum = 2 , form = form )
def removeOntology ( self ) : """Removes an ontology from the repo ."""
self . _openRepo ( ) ontology = self . _repo . getOntologyByName ( self . _args . ontologyName ) def func ( ) : self . _updateRepo ( self . _repo . removeOntology , ontology ) self . _confirmDelete ( "Ontology" , ontology . getName ( ) , func )
def _cnvkit_metrics ( cnns , target_bed , antitarget_bed , cov_interval , items ) : """Estimate noise of a sample using a flat background . Only used for panel / targeted data due to memory issues with whole genome samples ."""
if cov_interval == "genome" : return cnns target_cnn = [ x [ "file" ] for x in cnns if x [ "cnntype" ] == "target" ] [ 0 ] background_file = "%s-flatbackground.cnn" % utils . splitext_plus ( target_cnn ) [ 0 ] background_file = cnvkit_background ( [ ] , background_file , items , target_bed , antitarget_bed ) cnr_fi...
def get_article_content ( self , url , del_qqmusic = True , del_mpvoice = True , unlock_callback = None , identify_image_callback = None , hosting_callback = None , raw = False ) : """获取文章原文 , 避免临时链接失效 Parameters url : str or unicode 原文链接 , 临时链接 raw : bool True : 返回原始html False : 返回处理后的html del _ qqmu...
resp = self . __get_by_unlock ( url , unlock_platform = self . __unlock_wechat , unlock_callback = unlock_callback , identify_image_callback = identify_image_callback ) resp . encoding = 'utf-8' if '链接已过期' in resp . text : raise WechatSogouException ( 'get_article_content 链接 [{}] 已过期' . format ( url ) ) if raw : ...
def get_all_child_edges ( self ) : """Return tuples for all child GO IDs , containing current GO ID and child GO ID ."""
all_child_edges = set ( ) for parent in self . children : all_child_edges . add ( ( parent . item_id , self . item_id ) ) all_child_edges |= parent . get_all_child_edges ( ) return all_child_edges
def getCol ( self , x ) : """return the x - th column , starting at 0"""
return [ self . getCell ( x , i ) for i in self . __size_range ]
def remove_father ( self , father ) : """Remove the father node . Do nothing if the node is not a father Args : fathers : list of fathers to add"""
self . _fathers = [ x for x in self . _fathers if x . node_id != father . node_id ]
def get_task_result ( self , task_id ) : """Get task result from worker . If the task is not finished , return None . It ' s prefered to use : class : ` carotte . Task ` object directly . : param string task _ id : Task ID : returns : Task dict : rtype : dict"""
data = { 'action' : 'get_result' , 'id' : task_id } self . __send_pyobj ( data ) task = self . __recv_pyobj ( ) return task
def show_pan_mark ( viewer , tf , color = 'red' ) : """Show a mark in the pan position ( center of window ) . Parameters viewer : an ImageView subclass instance If True , show the color bar ; else remove it if present . tf : bool If True , show the mark ; else remove it if present . color : str Color ...
tag = '_$pan_mark' radius = 10 canvas = viewer . get_private_canvas ( ) try : mark = canvas . get_object_by_tag ( tag ) if not tf : canvas . delete_object_by_tag ( tag ) else : mark . color = color except KeyError : if tf : Point = canvas . get_draw_class ( 'point' ) canv...
def make_package_tree ( matrix = None , labels = None , width = 25 , height = 10 , title = None , font_size = None ) : '''make package tree will make a dendrogram comparing a matrix of packages : param matrix : a pandas df of packages , with names in index and columns : param labels : a list of labels correspon...
from matplotlib import pyplot as plt from scipy . cluster . hierarchy import ( dendrogram , linkage ) if font_size is None : font_size = 8. from scipy . cluster . hierarchy import cophenet from scipy . spatial . distance import pdist if not isinstance ( matrix , pandas . DataFrame ) : bot . info ( "No pandas Da...
def ensure_port_cleanup ( bound_addresses , maxtries = 30 , sleeptime = 2 ) : """This makes sure any open ports are closed . Does this by connecting to them until they give connection refused . Servers should call like : : import paste . script ensure _ port _ cleanup ( [ 80 , 443 ] )"""
atexit . register ( _cleanup_ports , bound_addresses , maxtries = maxtries , sleeptime = sleeptime )
def parse_input ( s ) : """Parse the given input and intelligently transform it into an absolute , non - naive , timezone - aware datetime object for the UTC timezone . The input can be specified as a millisecond - precision UTC timestamp ( or delta against Epoch ) , with or without a terminating ' L ' . Alte...
if isinstance ( s , six . integer_types ) : s = str ( s ) elif not isinstance ( s , six . string_types ) : raise ValueError ( s ) original = s if s [ - 1 : ] == 'L' : s = s [ : - 1 ] sign = { '-' : - 1 , '=' : 0 , '+' : 1 } . get ( s [ 0 ] , None ) if sign is not None : s = s [ 1 : ] ts = 0 for unit in ...
def as_completed ( fs , timeout = None ) : """An iterator over the given futures that yields each as it completes . Args : fs : The sequence of Futures ( possibly created by different Executors ) to iterate over . timeout : The maximum number of seconds to wait . If None , then there is no limit on the wa...
if timeout is not None : end_time = timeout + time . time ( ) fs = set ( fs ) with _AcquireFutures ( fs ) : finished = set ( f for f in fs if f . _state in [ CANCELLED_AND_NOTIFIED , FINISHED ] ) pending = fs - finished waiter = _create_and_install_waiters ( fs , _AS_COMPLETED ) try : for future in ...
def send_im ( self , target , message , mentions = None , parse = None , update_msg_id = None , wrap_length = 5000 ) : """Send text message . : param target : Target user UIN or chat ID . : param message : Message text . : param mentions : Iterable with UINs to mention in message . : param parse : Iterable ...
try : responses = set ( ) for text in wrap ( string = str ( message ) , length = wrap_length ) : response = self . http_session . post ( url = "{}/im/sendIM" . format ( self . api_base_url ) , data = { "r" : uuid . uuid4 ( ) , "aimsid" : self . token , "t" : target , "message" : text , "mentions" : ( me...
def create ( cls , name , vm , size , snapshotprofile , datacenter , source , disk_type = 'data' , background = False ) : """Create a disk and attach it to a vm ."""
if isinstance ( size , tuple ) : prefix , size = size if source : size = None disk_params = cls . disk_param ( name , size , snapshotprofile ) disk_params [ 'datacenter_id' ] = int ( Datacenter . usable_id ( datacenter ) ) disk_params [ 'type' ] = disk_type if source : disk_id = int ( Image . usable_id ( so...
def list ( self ) : """Get ' s all of the LXC ' s and creates objects for them"""
service = self . _service lxc_names = service . list_names ( ) lxc_list = [ ] for name in lxc_names : lxc = self . get ( name ) lxc_list . append ( lxc ) return lxc_list
def ReadIndex ( self , index_file = None ) : """Reads the IndexTable index file of commands and templates . Args : index _ file : String , file where template / command mappings reside . Raises : CliTableError : A template column was not found in the table ."""
self . index_file = index_file or self . index_file fullpath = os . path . join ( self . template_dir , self . index_file ) if self . index_file and fullpath not in self . INDEX : self . index = IndexTable ( self . _PreParse , self . _PreCompile , fullpath ) self . INDEX [ fullpath ] = self . index else : s...
def get_list_w_id2nts ( ids , id2nts , flds , dflt_null = "" ) : """Return a new list of namedtuples by combining " dicts " of namedtuples or objects ."""
combined_nt_list = [ ] # 1 . Instantiate namedtuple object ntobj = cx . namedtuple ( "Nt" , " " . join ( flds ) ) # 2 . Fill dict with namedtuple objects for desired ids for item_id in ids : # 2a . Combine various namedtuples into a single namedtuple nts = [ id2nt . get ( item_id ) for id2nt in id2nts ] vals = ...
def translate ( self , type_ ) : """Given a built - in , an otherwise known type , or a name of known type , return its corresponding wrapper type : : > > > Types . translate ( int ) < _ IntType ( ' int ' , ' integer ' ) > > > > Types . translate ( ' string ' ) < _ StrType ( ' str ' , ' string ' , ' unicode...
if isinstance ( type_ , six . string_types ) : for t in self . all_types : if type_ in t . aliases : return t raise ValueError ( 'Failed to recognise type by name {!r}' . format ( type_ ) ) for t in self . all_types : if type_ in t . builtin_types : return t return type_
def __remove_category ( self , id ) : """move all activities to unsorted and remove category"""
affected_query = """ SELECT id FROM facts WHERE activity_id in (SELECT id FROM activities where category_id=?) """ affected_ids = [ res [ 0 ] for res in self . fetchall ( affected_query , ( id , ) ) ] update = "update activities set category_id = -1 where category_id = ?" ...
def __store_any ( self , o , method_name , member ) : """Determines type of member and stores it accordingly : param mixed o : Any parent object : param str method _ name : The name of the method or attribuet : param mixed member : Any child object"""
if should_exclude ( eval ( "o." + method_name ) , self . __exclusion_list ) : self . __store__ [ method_name ] = eval ( "o." + method_name ) return if hasattr ( member , '__call__' ) : self . __store_callable ( o , method_name , member ) elif inspect . isclass ( member ) : self . __store_class ( o , met...
async def get_info ( self ) : """Return a client . ModelInfo object for this Model . Retrieves latest info for this Model from the api server . The return value is cached on the Model . info attribute so that the valued may be accessed again without another api call , if desired . This method is called au...
facade = client . ClientFacade . from_connection ( self . connection ( ) ) self . _info = await facade . ModelInfo ( ) log . debug ( 'Got ModelInfo: %s' , vars ( self . info ) ) return self . info
def attach_ip ( self , server , family = 'IPv4' ) : """Attach a new ( random ) IPAddress to the given server ( object or UUID ) ."""
body = { 'ip_address' : { 'server' : str ( server ) , 'family' : family } } res = self . request ( 'POST' , '/ip_address' , body ) return IPAddress ( cloud_manager = self , ** res [ 'ip_address' ] )
def execute_command ( self , generator , write_concern , session ) : """Execute using write commands ."""
# nModified is only reported for write commands , not legacy ops . full_result = { "writeErrors" : [ ] , "writeConcernErrors" : [ ] , "nInserted" : 0 , "nUpserted" : 0 , "nMatched" : 0 , "nModified" : 0 , "nRemoved" : 0 , "upserted" : [ ] , } op_id = _randint ( ) def retryable_bulk ( session , sock_info , retryable ) :...
def name ( self , address ) : """Look up the name that the address points to , using a reverse lookup . Reverse lookup is opt - in for name owners . : param address : : type address : hex - string"""
reversed_domain = address_to_reverse_domain ( address ) return self . resolve ( reversed_domain , get = 'name' )
def as_dict ( self , join = '.' ) : """Returns all the errors in this collection as a path to message dictionary . Paths are joined with the ` ` join ` ` string ."""
result = { } for e in self . errors : result . update ( e . as_dict ( join ) ) return result
def _get_distance_term ( self , C , rhypo , mag ) : """Returns the distance scaling term"""
h_eff = self . _get_effective_distance ( mag ) r_val = np . sqrt ( rhypo ** 2.0 + h_eff ** 2.0 ) return C [ "c3" ] * np . log10 ( r_val )
async def open ( self ) -> 'Wallet' : """Explicit entry . Open wallet as configured , for later closure via close ( ) . For use when keeping wallet open across multiple calls . Raise any IndyError causing failure to open wallet , WalletState if wallet already open , or AbsentWallet on attempt to enter wallet ...
LOGGER . debug ( 'Wallet.open >>>' ) created = False while True : try : self . _handle = await wallet . open_wallet ( json . dumps ( self . config ) , json . dumps ( self . access_creds ) ) LOGGER . info ( 'Opened wallet %s on handle %s' , self . name , self . handle ) break except IndyE...
def sinus_values_by_hz ( framerate , hz , max_value ) : """Create sinus values with the given framerate and Hz . Note : We skip the first zero - crossing , so the values can be used directy in a loop . > > > values = sinus _ values _ by _ hz ( 22050 , 1200 , 255) > > > len ( values ) # 22050 / 1200Hz = 18,3...
count = int ( round ( float ( framerate ) / float ( hz ) ) ) count += 1 values = tuple ( sinus_values ( count , max_value ) ) values = values [ 1 : ] return values
def persisted ( cls , seconds = 0 , minutes = 0 , hours = 0 , days = 0 , weeks = 0 ) : """Cache the return of the function for given time . Default to 1 day . : param weeks : as name : param seconds : as name : param minutes : as name : param hours : as name : param days : as name : return : return of...
days += weeks * 7 hours += days * 24 minutes += hours * 60 seconds += minutes * 60 if seconds == 0 : # default to 1 day seconds = 24 * 60 * 60 def get_persisted_file ( hash_number ) : folder = cls . get_persist_folder ( ) if not os . path . exists ( folder ) : os . makedirs ( folder ) return os ...
def fromfile ( cls , fileobj , coltype = LIGOTimeGPS ) : """Return a Cache object whose entries are read from an open file ."""
c = [ cls . entry_class ( line , coltype = coltype ) for line in fileobj ] return cls ( c )
def pin_chat_message ( chat_id , message_id , disable_notification = None , ** kwargs ) : """Use this method to pin a message in a supergroup or a channel . The bot must be an administrator in the chat for this to work and must have the ‘ can _ pin _ messages ’ admin right in the supergroup or ‘ can _ edit _ mess...
# required args params = dict ( chat_id = chat_id , message_id = message_id ) params . update ( _clean_params ( disable_notification = disable_notification , ) ) return TelegramBotRPCRequest ( 'pinChatMessage' , params = params , on_result = lambda result : result , ** kwargs )
def sense_tta ( self , target ) : """Sense for a Type A Target is supported for 106 , 212 and 424 kbps . However , there may not be any target that understands the activation commands in other than 106 kbps ."""
log . debug ( "polling for NFC-A technology" ) if target . brty not in ( "106A" , "212A" , "424A" ) : message = "unsupported bitrate {0}" . format ( target . brty ) raise nfc . clf . UnsupportedTargetError ( message ) self . chipset . in_set_rf ( target . brty ) self . chipset . in_set_protocol ( self . chipset...
def get_input_media_referenced_files ( self , var_name ) : """Generates a tuple with the value for the json / url argument and a dictionary for the multipart file upload . Will return something which might be similar to ` ( ' attach : / / { var _ name } ' , { var _ name : ( ' foo . png ' , open ( ' foo . png ' ...
# file to be uploaded string = 'attach://{name}' . format ( name = var_name ) return string , self . get_request_files ( var_name )
def _getResourceClass ( self ) : """Return the concrete subclass of Resource that ' s appropriate for auto - deploying this module ."""
if self . fromVirtualEnv : subcls = VirtualEnvResource elif os . path . isdir ( self . _resourcePath ) : subcls = DirectoryResource elif os . path . isfile ( self . _resourcePath ) : subcls = FileResource elif os . path . exists ( self . _resourcePath ) : raise AssertionError ( "Neither a file or a dire...
def sample ( self ) : """Sample from M - H algorithm Returns chain : np . array Chains for each parameter mean _ est : np . array Mean values for each parameter median _ est : np . array Median values for each parameter upper _ 95 _ est : np . array Upper 95 % credibility interval for each paramet...
acceptance = 1 finish = 0 while ( acceptance < 0.234 or acceptance > 0.4 ) or finish == 0 : # If acceptance is in range , proceed to sample , else continue tuning if not ( acceptance < 0.234 or acceptance > 0.4 ) : finish = 1 if not self . quiet_progress : print ( "" ) print ...
def _do_print ( self , cmd , args ) : """Display symbols . p Display names of inspectable objects . p < id > Display the content of an object ."""
name = args [ 0 ] . strip ( ) if not name : self . stderr . write ( 'TODO: Display names of inspectable objects.\n' ) return try : code = textwrap . dedent ( r''' self.stdout.write(name + ':\n' + textwrap.indent(pprint.pformat({}), ' ') + '\n') ''' ) . format ( nam...
def hdel ( self , name , * keys ) : """Delete one or more hash field . : param name : str the name of the redis key : param keys : on or more members to remove from the key . : return : Future ( )"""
with self . pipe as pipe : m_encode = self . memberparse . encode keys = [ m_encode ( m ) for m in self . _parse_values ( keys ) ] return pipe . hdel ( self . redis_key ( name ) , * keys )
def get_kbd_values_by_def ( confdict , searchwith = "" ) : """Return a list of values by searching a dynamic kb . : param confdict : dictionary with keys " field " , " expression " and " collection " name : param searchwith : a term to search with : return : list of values"""
from invenio_search . api import Query # get the configuration so that we see what the field is if not confdict : return [ ] if 'field' not in confdict : return [ ] field = confdict [ 'field' ] expression = confdict [ 'expression' ] collection = "" if 'collection' in confdict : collection = confdict [ 'coll...
def encloses_annulus ( x_min , x_max , y_min , y_max , nx , ny , r_in , r_out ) : '''Encloses function backported from old photutils'''
gout = circular_overlap_grid ( x_min , x_max , y_min , y_max , nx , ny , r_out , 1 , 1 ) gin = circular_overlap_grid ( x_min , x_max , y_min , y_max , nx , ny , r_in , 1 , 1 ) return gout - gin
def _get_types ( func , clsm , slf , clss = None , prop_getter = False , unspecified_type = Any , infer_defaults = None ) : """Helper for get _ types and get _ member _ types ."""
func0 = util . _actualfunc ( func , prop_getter ) # check consistency regarding special case with ' self ' - keyword if not slf : argNames = util . getargnames ( util . getargspecs ( func0 ) ) if len ( argNames ) > 0 : if clsm : if argNames [ 0 ] != 'cls' : util . _warn_argna...
def remote_file_size ( self , remote_cmd = "" , remote_file = None ) : """Get the file size of the remote file ."""
if remote_file is None : if self . direction == "put" : remote_file = self . dest_file elif self . direction == "get" : remote_file = self . source_file if not remote_cmd : remote_cmd = "dir {}/{}" . format ( self . file_system , remote_file ) remote_out = self . ssh_ctl_chan . send_command ...
def setup ( self , app : web . Application ) : """Installation routes to app . router : param app : instance of aiohttp . web . Application"""
if self . app is app : raise ValueError ( 'The router is already configured ' 'for this application' ) self . app = app routes = sorted ( ( ( r . name , ( r , r . url_for ( ) . human_repr ( ) ) ) for r in self . routes ( ) ) , key = utils . sort_key ) exists = set ( ) # type : Set [ str ] for name , ( route , path ...
def pretty_str ( self , indent = 0 ) : """Return a human - readable string representation of this object . Kwargs : indent ( int ) : The amount of spaces to use as indentation ."""
spaces = ' ' * indent pretty = spaces + 'class ' + self . name if self . superclasses : superclasses = ', ' . join ( self . superclasses ) pretty += '(' + superclasses + ')' pretty += ':\n' if self . members : pretty += '\n\n' . join ( c . pretty_str ( indent + 2 ) for c in self . members ) else : prett...
def quilc_compile_payload ( quil_program , isa , specs ) : """REST payload for : py : func : ` ForestConnection . _ quilc _ compile `"""
if not quil_program : raise ValueError ( "You have attempted to compile an empty program." " Please provide an actual program." ) if not isinstance ( quil_program , Program ) : raise TypeError ( "quil_program must be a Program object." ) if not isinstance ( isa , ISA ) : raise TypeError ( "isa must be an IS...
def fused_multiply_adder ( mult_A , mult_B , add , signed = False , reducer = adders . wallace_reducer , adder_func = adders . kogge_stone ) : """Generate efficient hardware for a * b + c . Multiplies two wirevectors together and adds a third wirevector to the multiplication result , all in one step . By doin...
# TODO : Specify the length of the result wirevector return generalized_fma ( ( ( mult_A , mult_B ) , ) , ( add , ) , signed , reducer , adder_func )
def glitter_startbody ( context ) : """Template tag which renders the glitter overlay and sidebar . This is only shown to users with permission to edit the page ."""
user = context . get ( 'user' ) path_body = 'glitter/include/startbody.html' path_plus = 'glitter/include/startbody_%s_%s.html' rendered = '' if user is not None and user . is_staff : templates = [ path_body ] # We ' ve got a page with a glitter object : # - May need a different startbody template # - C...
def variable_length_to_fixed_length_vector_encoding ( self , vector_encoding_name , left_edge = 4 , right_edge = 4 , max_length = 15 ) : """Encode variable - length sequences using a fixed - length encoding designed for preserving the anchor positions of class I peptides . The sequences must be of length at lea...
cache_key = ( "fixed_length_vector_encoding" , vector_encoding_name , left_edge , right_edge , max_length ) if cache_key not in self . encoding_cache : fixed_length_sequences = ( self . sequences_to_fixed_length_index_encoded_array ( self . sequences , left_edge = left_edge , right_edge = right_edge , max_length = ...
def is_path_python_module ( thepath ) : """Given a path , find out of the path is a python module or is inside a python module ."""
thepath = path . normpath ( thepath ) if path . isfile ( thepath ) : base , ext = path . splitext ( thepath ) if ext in _py_suffixes : return True return False if path . isdir ( thepath ) : for suffix in _py_suffixes : if path . isfile ( path . join ( thepath , '__init__%s' % suffix ) ) ...
def get_first ( self , n = 1 ) : """Retrieve the first n rows from the table : param n : number of rows to return : return : list of rows"""
rows = [ ] # Get values from the partial db first if self . tracker . dbcon_master and check_table_exists ( self . tracker . dbcon_master , self . name ) : rows . extend ( get_first_row ( self . tracker . dbcon_master , self . name , n ) ) # Then add rows from the master if required if len ( rows ) < n and self . t...
def keygrip_nist256 ( vk ) : """Compute keygrip for NIST256 curve public keys ."""
curve = vk . curve . curve gen = vk . curve . generator g = ( 4 << 512 ) | ( gen . x ( ) << 256 ) | gen . y ( ) point = vk . pubkey . point q = ( 4 << 512 ) | ( point . x ( ) << 256 ) | point . y ( ) return _compute_keygrip ( [ [ 'p' , util . num2bytes ( curve . p ( ) , size = 32 ) ] , [ 'a' , util . num2bytes ( curve ...
def read_user_data ( self , user_data_path ) : """Reads and parses a user _ data file . Args : user _ data _ path ( str ) : path to the userdata file Returns : str : the parsed user data file"""
raw_user_data = read_value_from_path ( user_data_path ) variables = self . get_variables ( ) return parse_user_data ( variables , raw_user_data , self . name )
def classify ( self , peer_dir_meta ) : """Classify this entry as ' new ' , ' unmodified ' , or ' modified ' ."""
assert self . classification is None peer_entry_meta = None if peer_dir_meta : # Metadata is generally available , so we can detect ' new ' or ' modified ' peer_entry_meta = peer_dir_meta . get ( self . name , False ) if self . is_dir ( ) : # Directories are considered ' unmodified ' ( would require deep traver...
def __get_url ( url ) : """Load json data from url and return result ."""
log . info ( "Retrieving weather data (%s)..." , url ) result = { SUCCESS : False , MESSAGE : None } try : r = requests . get ( url ) result [ STATUS_CODE ] = r . status_code result [ HEADERS ] = r . headers result [ CONTENT ] = r . text if ( 200 == r . status_code ) : result [ SUCCESS ] = ...
def isDirty ( self , CachableItem ) : """True if cached information requires update for ICachableItem"""
_cachedItem = self . get ( CachableItem ) if not _cachedItem : return True _newCacheItem = self . mapper . get ( CachableItem ) return False if _cachedItem == _newCacheItem else True
def container_instance_from_string ( id ) : """Create a ContainerInstance from an id string"""
try : service , instance = id . rsplit ( '_' , 1 ) instance = int ( instance ) except ( TypeError , ValueError ) : raise context . ValueError ( "Invalid container id %r" % id ) return _proto . ContainerInstance ( service_name = service , instance = instance )
def all_keys ( self ) : '''Merge managed keys with local keys'''
keys = self . list_keys ( ) keys . update ( self . local_keys ( ) ) return keys
def uncomment_or_update_or_append_line ( filename , prefix , new_line , comment = '#' , keep_backup = True , update_or_append_line = update_or_append_line ) : '''Remove the comment of an commented out line and make the line " active " . If such an commented out line not exists it would be appended .'''
uncommented = update_or_append_line ( filename , prefix = comment + prefix , new_line = new_line , keep_backup = keep_backup , append = False ) if not uncommented : update_or_append_line ( filename , prefix , new_line , keep_backup = keep_backup , append = True )
def spectra ( self , alpha = None , nmax = None , convention = 'power' , unit = 'per_l' , base = 10. ) : """Return the spectra of one or more Slepian functions . Usage spectra = x . spectra ( [ alpha , nmax , convention , unit , base ] ) Returns spectra : ndarray , shape ( lmax + 1 , nmax ) A matrix with ...
if alpha is None : if nmax is None : nmax = self . nmax spectra = _np . zeros ( ( self . lmax + 1 , nmax ) ) for iwin in range ( nmax ) : coeffs = self . to_array ( iwin ) spectra [ : , iwin ] = _spectrum ( coeffs , normalization = '4pi' , convention = convention , unit = unit , base...
def _pfp__build ( self , stream = None , save_offset = False ) : """Build the field and write the result into the stream : stream : An IO stream that can be written to : returns : None"""
if save_offset and stream is not None : self . _pfp__offset = stream . tell ( ) # returns either num bytes written or total data res = utils . binary ( "" ) if stream is None else 0 # iterate IN ORDER for child in self . _pfp__children : child_res = child . _pfp__build ( stream , save_offset ) res += child_...
def _get_reference ( self ) : """Sets up references to important components . A reference is typically an index or a list of indices that point to the corresponding elements in a flattened array , which is how MuJoCo stores physical simulation data ."""
super ( ) . _get_reference ( ) self . hole_body_id = self . sim . model . body_name2id ( "hole" ) self . cyl_body_id = self . sim . model . body_name2id ( "cylinder" )
def delete_alarms ( deployment_id , alert_id = None , metric_name = None , api_key = None , profile = 'telemetry' ) : '''delete an alert specified by alert _ id or if not specified blows away all the alerts in the current deployment . Returns ( bool success , str message ) tuple . CLI Example : salt myminio...
auth = _auth ( profile = profile ) if alert_id is None : # Delete all the alarms associated with this deployment alert_ids = get_alert_config ( deployment_id , api_key = api_key , profile = profile ) else : alert_ids = [ alert_id ] if not alert_ids : return False , "failed to find alert associated with depl...
def discharge ( ctx , content , key , locator , checker ) : '''Handles a discharge request as received by the / discharge endpoint . @ param ctx The context passed to the checker { checkers . AuthContext } @ param content URL and form parameters { dict } @ param locator Locator used to add third party cavea...
id = content . get ( 'id' ) if id is not None : id = id . encode ( 'utf-8' ) else : id = content . get ( 'id64' ) if id is not None : id = utils . b64decode ( id ) caveat = content . get ( 'caveat64' ) if caveat is not None : caveat = utils . b64decode ( caveat ) return bakery . discharge ( ctx ...
def get_users_with_permission ( obj , permission ) : """Return users with specific permission on object . : param obj : Object to return users for : param permission : Permission codename"""
user_model = get_user_model ( ) return user_model . objects . filter ( userobjectpermission__object_pk = obj . pk , userobjectpermission__permission__codename = permission , ) . distinct ( )
def db_create ( name , user = None , host = None , port = None , maintenance_db = None , password = None , tablespace = None , encoding = None , lc_collate = None , lc_ctype = None , owner = None , template = None , runas = None ) : '''Adds a databases to the Postgres server . CLI Example : . . code - block : :...
# Base query to create a database query = 'CREATE DATABASE "{0}"' . format ( name ) # " With " - options to create a database with_args = salt . utils . odict . OrderedDict ( [ ( 'TABLESPACE' , _quote_ddl_value ( tablespace , '"' ) ) , # owner needs to be enclosed in double quotes so postgres # doesn ' t get thrown by ...
def handle_process_output ( process , stdout_handler , stderr_handler , finalizer = None , decode_streams = True ) : """Registers for notifications to lean that process output is ready to read , and dispatches lines to the respective line handlers . This function returns once the finalizer returns : return : ...
# Use 2 " pump " threads and wait for both to finish . def pump_stream ( cmdline , name , stream , is_decode , handler ) : try : for line in stream : if handler : if is_decode : line = line . decode ( defenc ) handler ( line ) except Except...
def set ( cls , color ) : """Sets the terminal to the passed color . : param color : one of the availabe colors ."""
sys . stdout . write ( cls . colors . get ( color , cls . colors [ 'RESET' ] ) )
def tablename_from_link ( klass , link ) : """Helper method for URL ' s that look like / api / now / v1 / table / FOO / sys _ id etc ."""
arr = link . split ( "/" ) i = arr . index ( "table" ) tn = arr [ i + 1 ] return tn
def VerifyStructure ( self , parser_mediator , lines ) : """Verifies whether content corresponds to an SCCM log file . Args : parser _ mediator ( ParserMediator ) : mediates interactions between parsers and other components , such as storage and dfvfs . lines ( str ) : one or more lines from the text file ....
# Identify the token to which we attempt a match . match = self . _PARSING_COMPONENTS [ 'msg_left_delimiter' ] . match # Because logs files can lead with a partial event , # we can ' t assume that the first character ( post - BOM ) # in the file is the beginning of our match - so we # look for match anywhere in lines ....
def create ( self , metric_id , value , timestamp = None ) : """Add a Metric Point to a Metric : param int metric _ id : Metric ID : param int value : Value to plot on the metric graph : param str timestamp : Unix timestamp of the point was measured : return : Created metric point data ( : class : ` dict ` ...
data = ApiParams ( ) data [ 'value' ] = value data [ 'timestamp' ] = timestamp return self . _post ( 'metrics/%s/points' % metric_id , data = data ) [ 'data' ]
def parse_args_kwargs ( self , * args , ** kwargs ) : '''Parse the arguments with keywords .'''
# unpack the arginfo keys , defdict = self . arginfo assigned = keys [ : len ( args ) ] not_assigned = keys [ len ( args ) : ] # validate kwargs for key in kwargs : assert key not in assigned assert key in keys # integrate args and kwargs knowns = dict ( defdict , ** kwargs ) parsed_args = args + tuple ( [ know...
def Update ( self , menu = None , tooltip = None , filename = None , data = None , data_base64 = None , ) : '''Updates the menu , tooltip or icon : param menu : menu defintion : param tooltip : string representing tooltip : param filename : icon filename : param data : icon raw image : param data _ base64...
# Menu if menu is not None : self . TaskBarIcon . menu = menu if filename : self . icon = wx . Icon ( filename , wx . BITMAP_TYPE_ANY ) elif data_base64 : self . icon = PyEmbeddedImage ( data_base64 ) . GetIcon ( ) elif not self . icon : self . icon = PyEmbeddedImage ( DEFAULT_BASE64_ICON ) . GetIcon ( ...
def getFileHandle ( self , dataFile , openMethod ) : """Returns handle associated to the filename . If the file is already opened , update its priority in the cache and return its handle . Otherwise , open the file using openMethod , store it in the cache and return the corresponding handle ."""
if dataFile in self . _memoTable : handle = self . _memoTable [ dataFile ] self . _update ( dataFile , handle ) return handle else : try : handle = openMethod ( dataFile ) except ValueError : raise exceptions . FileOpenFailedException ( dataFile ) self . _memoTable [ dataFile ] =...
def _get_artifact_context ( run , file_type ) : """Gets the artifact details for the given run and file _ type ."""
sha1sum = None image_file = False log_file = False config_file = False if request . path == '/image' : image_file = True if file_type == 'before' : sha1sum = run . ref_image elif file_type == 'diff' : sha1sum = run . diff_image elif file_type == 'after' : sha1sum = run . image ...
def calc_rr ( qrs_locs , fs = None , min_rr = None , max_rr = None , qrs_units = 'samples' , rr_units = 'samples' ) : """Compute rr intervals from qrs indices by extracting the time differences . Parameters qrs _ locs : numpy array 1d array of qrs locations . fs : float , optional Sampling frequency of ...
rr = np . diff ( qrs_locs ) # Empty input qrs _ locs if not len ( rr ) : return rr # Convert to desired output rr units if needed if qrs_units == 'samples' and rr_units == 'seconds' : rr = rr / fs elif qrs_units == 'seconds' and rr_units == 'samples' : rr = rr * fs # Apply rr interval filters if min_rr is n...
def parse_result ( self , data ) : """Returns a YHSM _ GeneratedAEAD instance , or throws pyhsm . exception . YHSM _ CommandFailed ."""
# typedef struct { # uint8 _ t nonce [ YSM _ AEAD _ NONCE _ SIZE ] ; / / Nonce ( publicId for Yubikey AEADs ) # uint32 _ t keyHandle ; / / Key handle # YSM _ STATUS status ; / / Status # uint8 _ t numBytes ; / / Number of bytes in AEAD block # uint8 _ t aead [ YSM _ AEAD _ MAX _ SIZE ] ; / / AEAD block # } YSM _ AEAD _...
def list_controller_revision_for_all_namespaces ( self , ** kwargs ) : # noqa : E501 """list _ controller _ revision _ for _ all _ namespaces # noqa : E501 list or watch objects of kind ControllerRevision # noqa : E501 This method makes a synchronous HTTP request by default . To make an asynchronous HTTP requ...
kwargs [ '_return_http_data_only' ] = True if kwargs . get ( 'async_req' ) : return self . list_controller_revision_for_all_namespaces_with_http_info ( ** kwargs ) # noqa : E501 else : ( data ) = self . list_controller_revision_for_all_namespaces_with_http_info ( ** kwargs ) # noqa : E501 return dat...
def generate ( env ) : """Add Builders and construction variables for javah to an Environment ."""
java_javah = SCons . Tool . CreateJavaHBuilder ( env ) java_javah . emitter = emit_java_headers env [ '_JAVAHOUTFLAG' ] = JavaHOutFlagGenerator env [ 'JAVAH' ] = 'javah' env [ 'JAVAHFLAGS' ] = SCons . Util . CLVar ( '' ) env [ '_JAVAHCLASSPATH' ] = getJavaHClassPath env [ 'JAVAHCOM' ] = '$JAVAH $JAVAHFLAGS $_JAVAHOUTFL...
def _fill_gaps ( tr ) : """Interpolate through gaps and work - out where gaps are . : param tr : Gappy trace ( e . g . tr . data is np . ma . MaskedArray ) : type tr : ` obspy . core . stream . Trace ` : return : gaps , trace , where gaps is a list of dict"""
tr = tr . split ( ) gaps = tr . get_gaps ( ) tr = tr . detrend ( ) . merge ( fill_value = 0 ) [ 0 ] gaps = [ { 'starttime' : gap [ 4 ] , 'endtime' : gap [ 5 ] } for gap in gaps ] return gaps , tr
def call_sync_callbacks ( self ) : """Call every sync callback with CPU cycles trigger"""
current_cycles = self . cycles for callback_cycles , callback in self . sync_callbacks : # get the CPU cycles count of the last call last_call_cycles = self . sync_callbacks_cyles [ callback ] if current_cycles - last_call_cycles > callback_cycles : # this callback should be called # Save the current cycles...
def get_url ( url , parser = 'html' ) : """Requests the specified url and returns a BeautifulSoup object with its contents ."""
url = request . quote ( url , safe = ':/?=&' ) logger . debug ( 'URL: %s' , url ) req = request . Request ( url , headers = { 'User-Agent' : 'foobar' } ) try : response = request . urlopen ( req ) except HTTPError : raise except ( ssl . SSLError , URLError ) : # Some websites ( like metal - archives ) use older...
async def set_topic ( self , channel , topic ) : """Set topic on channel . Users should only rely on the topic actually being changed when receiving an on _ topic _ change callback ."""
if not self . is_channel ( channel ) : raise ValueError ( 'Not a channel: {}' . format ( channel ) ) elif not self . in_channel ( channel ) : raise NotInChannel ( channel ) await self . rawmsg ( 'TOPIC' , channel , topic )
def get_rackspace_info ( connection , server_id ) : """queries Rackspace for details about a particular server id"""
server = connection . servers . get ( server_id ) data = { } data [ 'ip_address' ] = server . accessIPv4 data [ 'accessIPv4' ] = server . accessIPv4 data [ 'accessIPv6' ] = server . accessIPv6 data [ 'addresses' ] = server . addresses data [ 'created' ] = server . created data [ 'flavor' ] = server . flavor data [ 'id'...
def get_transcript_preferences ( course_id ) : """Retrieves course wide transcript preferences Arguments : course _ id ( str ) : course id"""
try : transcript_preference = TranscriptPreference . objects . get ( course_id = course_id ) except TranscriptPreference . DoesNotExist : return return TranscriptPreferenceSerializer ( transcript_preference ) . data
def update ( self , items ) : """Updates the dependencies in the inverse relationship format , i . e . from an iterable or dict that is structured as ` ( item , dependent _ items ) ` . Note that this implementation is only valid for 1:1 relationships , i . e . that each node has also exactly one dependent . For...
for parent , sub_item in _iterate_dependencies ( items ) : dep = self . _deps [ sub_item ] if parent not in dep . parent : dep . parent . append ( parent )
def load_extensions_from_config ( ** config ) : """Loads extensions"""
extensions = [ ] if 'EXTENSIONS' in config : for ext in config [ 'EXTENSIONS' ] : try : extensions . append ( locate ( ext ) ) except Exception as e : print ( e ) return extensions
def initialize_tasks ( self ) : """Load the input queue to capacity . Overfilling causes a deadlock when ` queue . put ` blocks when full , so further tasks are enqueued as results are returned ."""
# Add a poison pill to shutdown each process . self . tasks = chain ( self . iterable , [ POISON_PILL ] * self . num_processes ) for task in islice ( self . tasks , Q_MAX_SIZE ) : log . debug ( 'Putting %s on queue' , task ) self . task_queue . put ( task )
def legal_date ( year , month , day ) : '''Checks if a given date is a legal positivist date'''
try : assert year >= 1 assert 0 < month <= 14 assert 0 < day <= 28 if month == 14 : if isleap ( year + YEAR_EPOCH - 1 ) : assert day <= 2 else : assert day == 1 except AssertionError : raise ValueError ( "Invalid Positivist date: ({}, {}, {})" . format ( year ...