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def quality_comparator ( video_data ) : """Custom comparator used to choose the right format based on the resolution ."""
def parse_resolution ( res : str ) -> Tuple [ int , ... ] : return tuple ( map ( int , res . split ( 'x' ) ) ) raw_resolution = video_data [ 'resolution' ] resolution = parse_resolution ( raw_resolution ) return resolution
def group_list ( auth = None , ** kwargs ) : '''List groups CLI Example : . . code - block : : bash salt ' * ' keystoneng . group _ list salt ' * ' keystoneng . group _ list domain _ id = b62e76fbeeff4e8fb77073f591cf211e'''
cloud = get_operator_cloud ( auth ) kwargs = _clean_kwargs ( ** kwargs ) return cloud . list_groups ( ** kwargs )
def _get_start_end_nans ( data ) : """Find NaN values in data that either start or end the time - series Function to return a binary array of same size as data where ` True ` values correspond to NaN values present at beginning or end of time - series . NaNs internal to the time - series are not included in the...
# find NaNs that start a time - series start_nan = np . isnan ( data ) for idx , row in enumerate ( start_nan [ : - 1 ] ) : start_nan [ idx + 1 ] = np . logical_and ( row , start_nan [ idx + 1 ] ) # find NaNs that end a time - series end_nan = np . isnan ( data ) for idx , row in enumerate ( end_nan [ - 2 : : - 1 ]...
def iter_related ( self ) : '''Generator function that iterates this object ' s related providers , which includes this provider .'''
for tpl in self . provider_run . templates : yield tpl . providers [ self . index ]
def perp ( weights ) : r"""Calculate the normalized perplexity : math : ` \ mathcal { P } ` of samples with ` ` weights ` ` : math : ` \ omega _ i ` . : math : ` \ mathcal { P } = 0 ` is terrible and : math : ` \ mathcal { P } = 1 ` is perfect . . . math : : \ mathcal { P } = exp ( H ) / N where . . mat...
# normalize weights w = _np . asarray ( weights ) / _np . sum ( weights ) # mask zero weights w = _np . ma . MaskedArray ( w , copy = False , mask = ( w == 0 ) ) # avoid NaN due to log ( 0 ) by log ( 1 ) = 0 entr = - _np . sum ( w * _np . log ( w . filled ( 1.0 ) ) ) return _np . exp ( entr ) / len ( w )
def bind ( self ) : """Attempts to bind to the LDAP server using the credentials of the service account . : return : Bound LDAP connection object if successful or ` ` None ` ` if unsuccessful ."""
conn = self . initialize try : conn . simple_bind_s ( current_app . config [ 'LDAP_USERNAME' ] , current_app . config [ 'LDAP_PASSWORD' ] ) return conn except ldap . LDAPError as e : raise LDAPException ( self . error ( e . args ) )
def split ( self , url ) : """Split the url into I { protocol } and I { location } @ param url : A URL . @ param url : str @ return : ( I { url } , I { location } ) @ rtype : tuple"""
parts = url . split ( '://' , 1 ) if len ( parts ) == 2 : return parts else : return ( None , url )
def make_routing_table ( obj , keys , prefix = 'on_' ) : """: return : a dictionary roughly equivalent to ` ` { ' key1 ' : obj . on _ key1 , ' key2 ' : obj . on _ key2 , . . . } ` ` , but ` ` obj ` ` does not have to define all methods . It may define the needed ones only . : param obj : the object : param ...
def maptuple ( k ) : if isinstance ( k , tuple ) : if len ( k ) == 2 : return k elif len ( k ) == 1 : return k [ 0 ] , lambda * aa , ** kw : getattr ( obj , prefix + k [ 0 ] ) ( * aa , ** kw ) else : raise ValueError ( ) else : return k , lambd...
def _read_motifs_from_filehandle ( handle , fmt ) : """Read motifs from a file - like object . Parameters handle : file - like object Motifs . fmt : string , optional Motif format , can be ' pwm ' , ' transfac ' , ' xxmotif ' , ' jaspar ' or ' align ' . Returns motifs : list List of Motif instances ...
if fmt . lower ( ) == "pwm" : motifs = _read_motifs_pwm ( handle ) if fmt . lower ( ) == "transfac" : motifs = _read_motifs_transfac ( handle ) if fmt . lower ( ) == "xxmotif" : motifs = _read_motifs_xxmotif ( handle ) if fmt . lower ( ) == "align" : motifs = _read_motifs_align ( handle ) if fmt . lower...
def resetState ( self ) : """Reset to the original domain state , including all possible values"""
self . extend ( self . _hidden ) del self . _hidden [ : ] del self . _states [ : ]
def check_dimensionless_vertical_coordinate ( self , ds ) : '''Check the validity of dimensionless coordinates under CF CF § 4.3.2 The units attribute is not required for dimensionless coordinates . The standard _ name attribute associates a coordinate with its definition from Appendix D , Dimensionless Ver...
ret_val = [ ] z_variables = cfutil . get_z_variables ( ds ) deprecated_units = [ 'level' , 'layer' , 'sigma_level' ] for name in z_variables : variable = ds . variables [ name ] standard_name = getattr ( variable , 'standard_name' , None ) units = getattr ( variable , 'units' , None ) formula_terms = ge...
def detectSyntax ( self , xmlFileName = None , mimeType = None , language = None , sourceFilePath = None , firstLine = None ) : """Get syntax by next parameters ( fill as many , as known ) : * name of XML file with syntax definition * MIME type of source file * Programming language name * Source file path ...
oldLanguage = self . language ( ) self . clearSyntax ( ) syntax = self . _globalSyntaxManager . getSyntax ( xmlFileName = xmlFileName , mimeType = mimeType , languageName = language , sourceFilePath = sourceFilePath , firstLine = firstLine ) if syntax is not None : self . _highlighter = SyntaxHighlighter ( syntax ,...
async def get_my_did_with_meta ( wallet_handle : int , did : str ) -> str : """Get DID metadata and verkey stored in the wallet . : param wallet _ handle : wallet handler ( created by open _ wallet ) . : param did : The DID to retrieve metadata . : return : DID with verkey and metadata ."""
logger = logging . getLogger ( __name__ ) logger . debug ( "get_my_did_with_meta: >>> wallet_handle: %r, did: %r" , wallet_handle , did ) if not hasattr ( get_my_did_with_meta , "cb" ) : logger . debug ( "get_my_did_with_meta: Creating callback" ) get_my_did_with_meta . cb = create_cb ( CFUNCTYPE ( None , c_int...
def _get_body_instance ( self ) : """Return the body instance ."""
simple_body = { MultipartType . OFPMP_FLOW : FlowStatsRequest , MultipartType . OFPMP_AGGREGATE : AggregateStatsRequest , MultipartType . OFPMP_PORT_STATS : PortStatsRequest , MultipartType . OFPMP_QUEUE : QueueStatsRequest , MultipartType . OFPMP_GROUP : GroupStatsRequest , MultipartType . OFPMP_METER : MeterMultipart...
def store_shot ( self ) : """Store current cregs to shots _ result"""
def to_str ( cregs ) : return '' . join ( str ( b ) for b in cregs ) key = to_str ( self . cregs ) self . shots_result [ key ] = self . shots_result . get ( key , 0 ) + 1
def _publish ( self , msg ) : """Publish , handling retries , a message in the queue . : param msg : Object which represents the message to be sent in the queue . Note that this object should be serializable in the configured format ( by default JSON ) ."""
connection = self . _connection . clone ( ) publish = connection . ensure ( self . producer , self . producer . publish , errback = self . __error_callback , max_retries = MQ_PRODUCER_MAX_RETRIES ) publish ( json . dumps ( msg ) , exchange = self . _exchange , routing_key = self . _routing_key , declare = [ self . _que...
def unsubscribe_from_data ( self , subscriber : Callable [ [ bytes ] , bool ] , ) -> None : """Not thread - safe ."""
self . _data_subscribers . remove ( subscriber )
def open ( self , fn ) : "Open image in ` fn ` , subclass and overwrite for custom behavior ."
return open_image ( fn , convert_mode = self . convert_mode , after_open = self . after_open )
def to_dict ( self ) : """Convert attributes and properties to a dict , so that it can be serialized ."""
return { k : getattr ( self , k ) for k in filter ( lambda k : not k . startswith ( '_' ) and k != 'to_dict' , dir ( self ) ) }
def likes ( self ) : """A : class : ` Feed < pypump . models . feed . Feed > ` of the people who ' ve liked the object . Example : > > > for person in mynote . likes : . . . print ( person . webfinger ) pypumptest1 @ pumpity . net pypumptest2 @ pumpyourself . com"""
endpoint = self . links [ "likes" ] if self . _likes is None : self . _likes = Feed ( endpoint , pypump = self . _pump ) return self . _likes
def circleconvert ( amount , currentformat , newformat ) : """Convert a circle measurement . : type amount : number : param amount : The number to convert . : type currentformat : string : param currentformat : The format of the provided value . : type newformat : string : param newformat : The intended...
# If the same format was provided if currentformat . lower ( ) == newformat . lower ( ) : # Return the provided value return amount # If the lowercase version of the current format is ' radius ' if currentformat . lower ( ) == 'radius' : # If the lowercase version of the new format is ' diameter ' if newformat ...
def readUTF ( self ) : """Reads a UTF - 8 string from the data stream . The string is assumed to be prefixed with an unsigned short indicating the length in bytes . @ rtype : C { str } @ return : A UTF - 8 string produced by the byte representation of characters ."""
length = self . stream . read_ushort ( ) return self . stream . read_utf8_string ( length )
def find_one_project ( zero_ok = False , more_ok = True , ** kwargs ) : """: param zero _ ok : If False ( default ) , : class : ` ~ dxpy . exceptions . DXSearchError ` is raised if the search has 0 results ; if True , returns None if the search has 0 results : type zero _ ok : bool : param more _ ok : I...
return _find_one ( find_projects , zero_ok = zero_ok , more_ok = more_ok , ** kwargs )
def cassist ( self , dc , dt , dt2 , nodiag = False , memlimit = - 1 ) : """Calculates probability of gene i regulating gene j with continuous data assisted method , with the recommended combination of multiple tests . Probabilities are converted from likelihood ratios separately for each A . This gives better ...
return _cassist_any ( self , dc , dt , dt2 , "pij_cassist" , nodiag = nodiag , memlimit = memlimit )
def _get_seaborn_chart ( self , xfield , yfield , chart_type , label , _opts = None , _style = None , ** kwargs ) : """Get an Seaborn chart object"""
plt . figure ( ) try : opts , style = self . _get_opts_seaborn ( _opts , _style ) except Exception as e : self . err ( e , "Can not get chart options" ) return # params # opts [ " xfield " ] = xfield # opts [ " yfield " ] = yfield # opts [ " dataobj " ] = self . df opts [ "chart_type" ] = chart_type self . ...
def _get_variant_silent ( parser , variant ) : """Gets a variant from the parser while disabling logging ."""
prev_log = config . LOG_NOT_FOUND config . LOG_NOT_FOUND = False results = parser . get_variant_genotypes ( variant ) config . LOG_NOT_FOUND = prev_log return results
def c_var_decls ( self ) : """Get the needed variable definitions ."""
if self . opts . no_structs : mod_decl = 'HMODULE {} = NULL;\n' . format ( self . name ) return [ mod_decl ] + [ '{} *{} = NULL;\n' . format ( self . _c_type_name ( name ) , name ) for name , dummy_args in self . funcs ] if self . opts . windll : return '' return [ '{} _{} = {{ 0 }};\n' . format ( self . _c...
def calc_resize_factor ( prediction , image_size ) : """Calculates how much prediction . shape and image _ size differ ."""
resize_factor_x = prediction . shape [ 1 ] / float ( image_size [ 1 ] ) resize_factor_y = prediction . shape [ 0 ] / float ( image_size [ 0 ] ) if abs ( resize_factor_x - resize_factor_y ) > 1.0 / image_size [ 1 ] : raise RuntimeError ( """The aspect ratio of the fixations does not mat...
def _incr_counter ( self , * args ) : """Increments a Hadoop counter . Note that this seems to be a bit slow , ~ 1 ms Don ' t overuse this function by updating very frequently ."""
if len ( args ) == 2 : # backwards compatibility with existing hadoop jobs group_name , count = args print ( 'reporter:counter:%s,%s' % ( group_name , count ) , file = sys . stderr ) else : group , name , count = args print ( 'reporter:counter:%s,%s,%s' % ( group , name , count ) , file = sys . stderr )
def _revoked_to_list ( revs ) : '''Turn the mess of OrderedDicts and Lists into a list of dicts for use in the CRL module .'''
list_ = [ ] for rev in revs : for rev_name , props in six . iteritems ( rev ) : # pylint : disable = unused - variable dict_ = { } for prop in props : for propname , val in six . iteritems ( prop ) : if isinstance ( val , datetime . datetime ) : val = ...
def list_lights ( self , selector = 'all' ) : """Given a selector ( defaults to all ) , return a list of lights . Without a selector provided , return list of all lights ."""
return self . client . perform_request ( method = 'get' , endpoint = 'lights/{}' , endpoint_args = [ selector ] , parse_data = False )
def left_motion ( self , event ) : """Callback for the B1 - Motion event , or the dragging of an item . Moves the item to the desired location , but limits its movement to a place on the actual Canvas . The item cannot be moved outside of the Canvas . : param event : Tkinter event"""
self . set_current ( ) results = self . canvas . find_withtag ( tk . CURRENT ) if len ( results ) is 0 : return item = results [ 0 ] rectangle = self . items [ item ] self . config ( cursor = "exchange" ) self . canvas . itemconfigure ( item , fill = "blue" ) xc , yc = self . canvas . canvasx ( event . x ) , self ....
def batch_predict_async ( training_dir , prediction_input_file , output_dir , mode , batch_size = 16 , shard_files = True , output_format = 'csv' , cloud = False ) : """Local and cloud batch prediction . Args : training _ dir : The output folder of training . prediction _ input _ file : csv file pattern to a ...
import google . datalab . utils as du with warnings . catch_warnings ( ) : warnings . simplefilter ( "ignore" ) if cloud : runner_results = cloud_batch_predict ( training_dir , prediction_input_file , output_dir , mode , batch_size , shard_files , output_format ) job = du . DataflowJob ( runner_...
def sensor_offsets_encode ( self , mag_ofs_x , mag_ofs_y , mag_ofs_z , mag_declination , raw_press , raw_temp , gyro_cal_x , gyro_cal_y , gyro_cal_z , accel_cal_x , accel_cal_y , accel_cal_z ) : '''Offsets and calibrations values for hardware sensors . This makes it easier to debug the calibration process . mag...
return MAVLink_sensor_offsets_message ( mag_ofs_x , mag_ofs_y , mag_ofs_z , mag_declination , raw_press , raw_temp , gyro_cal_x , gyro_cal_y , gyro_cal_z , accel_cal_x , accel_cal_y , accel_cal_z )
def connect ( self , tab_key ) : """Open a websocket connection to remote browser , determined by self . host and self . port . Each tab has it ' s own websocket endpoint ."""
assert self . tablist is not None tab_idx = self . _get_tab_idx_for_key ( tab_key ) if not self . tablist : self . tablist = self . fetch_tablist ( ) for fails in range ( 9999 ) : try : # If we ' re one past the end of the tablist , we need to create a new tab if tab_idx is None : self . log...
def show_feature ( self , user , feature ) : """Return True or False for the given feature ."""
user_filter = { self . model . USER_FEATURE_FIELD : user , } return self . get_feature ( feature ) . filter ( models . Q ( ** user_filter ) | models . Q ( everyone = True ) ) . exists ( )
def trim_empty_columns ( self ) : """Removes all trailing empty columns ."""
if self . nrows != 0 and self . ncols != 0 : last_col = - 1 for row in self . rows : for i in range ( last_col + 1 , len ( row ) ) : if not self . is_cell_empty ( row [ i ] ) : last_col = i ncols = last_col + 1 self . rows = [ row [ : ncols ] for row in self . rows ] ...
def next ( self ) : """Goes one item ahead and returns it ."""
rv = self . current self . pos = ( self . pos + 1 ) % len ( self . items ) return rv
def datetime ( self ) -> hints . Datetime : """Creates a : class : ` ~ datetime . datetime ` instance ( assumes UTC ) from the Unix time value of the timestamp with millisecond precision . : return : Timestamp in datetime form . : rtype : : class : ` ~ datetime . datetime `"""
mills = self . int return datetime . datetime . utcfromtimestamp ( mills // 1000.0 ) . replace ( microsecond = mills % 1000 * 1000 )
def aes_encrypt ( self , plain , sec_key , enable_b64 = True ) : """使用 ` ` aes ` ` 加密数据 , 并由 ` ` base64编码 ` ` 加密后的数据 - ` ` sec _ key ` ` 加密 ` ` msg ` ` , 最后选择 ` ` 是否由base64编码数据 ` ` - msg长度为16位数 , 不足则补 ' ascii \\ 0' . . warning : : msg长度为16位数 , 不足则补 ' ascii \\ 0' : param plain : : type plain : str : pa...
plain = helper . to_str ( plain ) sec_key = helper . to_str ( sec_key ) # 如果msg长度不为16倍数 , 需要补位 ' \ 0' plain += '\0' * ( self . bs - len ( plain ) % self . bs ) # 使用生成的 key , iv 加密 plain = helper . to_bytes ( plain ) cipher = self . aes_obj ( sec_key ) . encrypt ( plain ) # 是否返回 base64 编码数据 cip = base64 . b64encode ( ci...
def parse_parameters ( self , parameters , array_class = None ) : """Parses a parameters arg to figure out what fields need to be loaded . Parameters parameters : ( list of ) strings The parameter ( s ) to retrieve . A parameter can be the name of any field in ` ` samples _ group ` ` , a virtual field or me...
# get the type of array class to use if array_class is None : array_class = FieldArray # get the names of fields needed for the given parameters possible_fields = self [ self . samples_group ] . keys ( ) return array_class . parse_parameters ( parameters , possible_fields )
def relativize_path ( path , base , os_sep = os . sep ) : '''Make absolute path relative to an absolute base . : param path : absolute path : type path : str : param base : absolute base path : type base : str : param os _ sep : path component separator , defaults to current OS separator : type os _ sep...
if not check_base ( path , base , os_sep ) : raise OutsideDirectoryBase ( "%r is not under %r" % ( path , base ) ) prefix_len = len ( base ) if not base . endswith ( os_sep ) : prefix_len += len ( os_sep ) return path [ prefix_len : ]
def mon_status_check ( conn , logger , hostname , args ) : """A direct check for JSON output on the monitor status . For newer versions of Ceph ( dumpling and newer ) a new mon _ status command was added ( ` ceph daemon mon mon _ status ` ) and should be revisited if the output changes as this check depends o...
asok_path = paths . mon . asok ( args . cluster , hostname ) out , err , code = remoto . process . check ( conn , [ 'ceph' , '--cluster={cluster}' . format ( cluster = args . cluster ) , '--admin-daemon' , asok_path , 'mon_status' , ] , ) for line in err : logger . error ( line ) try : return json . loads ( b''...
def nTE ( cells1 = [ ] , cells2 = [ ] , spks1 = None , spks2 = None , timeRange = None , binSize = 20 , numShuffle = 30 ) : '''Calculate normalized transfer entropy - cells1 ( [ ' all ' , | ' allCells ' , ' allNetStims ' , | , 120 , | , ' E1 ' | , ( ' L2 ' , 56 ) | , ( ' L5 ' , [ 4,5,6 ] ) ] ) : Subset of cells f...
from neuron import h import netpyne from . . import sim import os root = os . path . dirname ( netpyne . __file__ ) if 'nte' not in dir ( h ) : try : print ( ' Warning: support/nte.mod not compiled; attempting to compile from %s via "nrnivmodl support"' % ( root ) ) os . system ( 'cd ' + root + '; n...
def on_page_markdown ( self , markdown , page , config , site_navigation = None , ** kwargs ) : "Provide a hook for defining functions from an external module"
# the site _ navigation argument has been made optional # ( deleted in post 1.0 mkdocs , but maintained here # for backward compatibility ) if not self . variables : return markdown else : # Create templae and get the variables md_template = Template ( markdown ) # Execute the jinja2 template and return ...
def pip_installer_url ( version = None ) : """Get argument to give to ` ` pip ` ` to install HPCBench ."""
version = version or hpcbench . __version__ version = str ( version ) if '.dev' in version : git_rev = 'master' if 'TRAVIS_BRANCH' in os . environ : git_rev = version . split ( '+' , 1 ) [ - 1 ] if '.' in git_rev : # get rid of date suffix git_rev = git_rev . split ( '.' , 1 ) [ 0 ] ...
def __get_header_with_auth ( self ) : """This private method returns the HTTP heder filled with the Authorization information with the user token . The token validity is monitored whenever this function is called , so according to the swagger page of TheTVDB ( https : / / api . thetvdb . com / swagger ) the tok...
auth_header = self . __get_header ( ) auth_header [ 'Authorization' ] = 'Bearer %s' % self . __token token_renew_time = self . __auth_time + timedelta ( seconds = self . TOKEN_DURATION_SECONDS ) if datetime . now ( ) > token_renew_time : token_max_time = self . __auth_time + timedelta ( seconds = self . TOKEN_MAX_D...
def content_preview ( self , request ) : """Admin view to preview Entry . content in HTML , useful when using markups to write entries ."""
data = request . POST . get ( 'data' , '' ) entry = self . model ( content = data ) return TemplateResponse ( request , 'admin/zinnia/entry/preview.html' , { 'preview' : entry . html_content } )
def count_of_wells ( self ) : """Number of wells in x / y - direction of template . Returns tuple ( xs , ys ) number of wells in x and y direction ."""
xs = set ( [ w . attrib [ 'WellX' ] for w in self . wells ] ) ys = set ( [ w . attrib [ 'WellY' ] for w in self . wells ] ) return ( len ( xs ) , len ( ys ) )
def map ( self , function , options = None ) : """Add a map phase to the map / reduce operation . : param function : Either a named Javascript function ( ie : ' Riak . mapValues ' ) , or an anonymous javascript function ( ie : ' function ( . . . ) . . . ' or an array [ ' erlang _ module ' , ' function ' ] ....
if options is None : options = dict ( ) if isinstance ( function , list ) : language = 'erlang' else : language = 'javascript' mr = RiakMapReducePhase ( 'map' , function , options . get ( 'language' , language ) , options . get ( 'keep' , False ) , options . get ( 'arg' , None ) ) self . _phases . append ( ...
def pull_request ( self , number ) : """Get the pull request indicated by ` ` number ` ` . : param int number : ( required ) , number of the pull request . : returns : : class : ` PullRequest < github3 . pulls . PullRequest > `"""
json = None if int ( number ) > 0 : url = self . _build_url ( 'pulls' , str ( number ) , base_url = self . _api ) json = self . _json ( self . _get ( url ) , 200 ) return PullRequest ( json , self ) if json else None
def preloop ( self ) : """Initialization before prompting user for commands . Despite the claims in the Cmd documentaion , Cmd . preloop ( ) is not a stub ."""
cmd . Cmd . preloop ( self ) # # sets up command completion try : if readline : readline . read_history_file ( sys . argv [ 0 ] + ".history" ) except Exception , err : if not isinstance ( err , IOError ) : self . stdout . write ( "history error: %s\n" % err )
def all ( cls ) : '''Return all tags that are currently applied to any dataset . : returns : a list of all tags that are currently applied to any dataset : rtype : list of ckan . model . tag . Tag objects'''
# if vocab _ id _ or _ name : # vocab = vocabulary . Vocabulary . get ( vocab _ id _ or _ name ) # if vocab is None : # # The user specified an invalid vocab . # raise ckan . logic . NotFound ( " could not find vocabulary ' % s ' " # % vocab _ id _ or _ name ) # query = meta . Session . query ( Tag ) . filter ( Tag . v...
def locale_title ( locale_name ) : """Giving a locale name return its title , taken from the settings . EXTRA _ COUNTRY _ LOCALES If the locale is not in the settings . EXTRA _ COUNTRY _ LOCALES , return it unchanged"""
l = dict ( settings . EXTRA_COUNTRY_LOCALES ) if locale_name not in l : return locale_name return l . get ( locale_name )
def create_union_mnist_dataset ( ) : """Create a UnionDataset composed of two versions of the MNIST datasets where each item in the dataset contains 2 distinct images superimposed"""
transform = transforms . Compose ( [ transforms . ToTensor ( ) , transforms . Normalize ( ( 0.1307 , ) , ( 0.3081 , ) ) ] ) mnist1 = datasets . MNIST ( 'data' , train = False , download = True , transform = transform ) data1 = zip ( mnist1 . test_data , mnist1 . test_labels ) # Randomize second dataset mnist2 = dataset...
def iter_prepostorder ( self , is_leaf_fn = None ) : """Iterate over all nodes in a tree yielding every node in both pre and post order . Each iteration returns a postorder flag ( True if node is being visited in postorder ) and a node instance ."""
to_visit = [ self ] if is_leaf_fn is not None : _leaf = is_leaf_fn else : _leaf = self . __class__ . is_leaf while to_visit : node = to_visit . pop ( - 1 ) try : node = node [ 1 ] except TypeError : # PREORDER ACTIONS yield ( False , node ) if not _leaf ( node ) : # ADD CHILD...
def __Autostart_TCP_Server_checkBox_set_ui ( self ) : """Sets the * * Autostart _ TCP _ Server _ checkBox * * Widget ."""
# Adding settings key if it doesn ' t exists . self . __settings . get_key ( self . __settings_section , "autostart_tcp_server" ) . isNull ( ) and self . __settings . set_key ( self . __settings_section , "autostart_tcp_server" , Qt . Checked ) autostart_tcp_server = foundations . common . get_first_item ( self . __set...
def generate_ssh ( self , server , args , configure ) : """异步同时执行SSH生成 generate ssh : param server : : param args : : param configure : : return :"""
self . reset_server_env ( server , configure ) # chmod project root owner sudo ( 'chown {user}:{user} -R {path}' . format ( user = configure [ server ] [ 'user' ] , path = bigdata_conf . project_root ) ) # generate ssh key if not exists ( '~/.ssh/id_rsa.pub' ) : run ( 'ssh-keygen -t rsa -P "" -f ~/.ssh/id_rsa' )
def tile ( self , map_id , x , y , z , retina = False , file_format = "png" , style_id = None , timestamp = None ) : """Returns an image tile , vector tile , or UTFGrid in the specified file format . Parameters map _ id : str The tile ' s unique identifier in the format username . id . x : int The tile ...
# Check x , y , and z . if x is None or y is None or z is None : raise ValidationError ( "x, y, and z must be not be None" ) # Validate x , y , z , retina , and file _ format . x = self . _validate_x ( x , z ) y = self . _validate_y ( y , z ) z = self . _validate_z ( z ) retina = self . _validate_retina ( retina ) ...
def update_from_json ( self , json_device ) : """Set all attributes based on API response ."""
self . identifier = json_device [ 'Id' ] self . license_plate = json_device [ 'EquipmentHeader' ] [ 'SerialNumber' ] self . make = json_device [ 'EquipmentHeader' ] [ 'Make' ] self . model = json_device [ 'EquipmentHeader' ] [ 'Model' ] self . equipment_id = json_device [ 'EquipmentHeader' ] [ 'EquipmentID' ] self . ac...
def genome_name_from_fasta_path ( fasta_path ) : """Extract genome name from fasta filename Get the filename without directory and remove the file extension . Example : With fasta file path ` ` / path / to / genome _ 1 . fasta ` ` : : fasta _ path = ' / path / to / genome _ 1 . fasta ' genome _ name = gen...
filename = os . path . basename ( fasta_path ) return re . sub ( r'(\.fa$)|(\.fas$)|(\.fasta$)|(\.fna$)|(\.\w{1,}$)' , '' , filename )
def delete_ace ( self , domain = None , user = None , sid = None ) : """delete ACE for the share delete ACE for the share . User could either supply the domain and username or the sid of the user . : param domain : domain of the user : param user : username : param sid : sid of the user or sid list of the...
if sid is None : if domain is None : domain = self . cifs_server . domain sid = UnityAclUser . get_sid ( self . _cli , user = user , domain = domain ) if isinstance ( sid , six . string_types ) : sid = [ sid ] ace_list = [ self . _make_remove_ace_entry ( s ) for s in sid ] resp = self . action ( "se...
def run_with_retcodes ( argv ) : """Run luigi with command line parsing , but raise ` ` SystemExit ` ` with the configured exit code . Note : Usually you use the luigi binary directly and don ' t call this function yourself . : param argv : Should ( conceptually ) be ` ` sys . argv [ 1 : ] ` `"""
logger = logging . getLogger ( 'luigi-interface' ) with luigi . cmdline_parser . CmdlineParser . global_instance ( argv ) : retcodes = retcode ( ) worker = None try : worker = luigi . interface . _run ( argv ) . worker except luigi . interface . PidLockAlreadyTakenExit : sys . exit ( retcodes . already_runn...
def resolve ( self , name , recursive = False , ** kwargs ) : """Accepts an identifier and resolves it to the referenced item . There are a number of mutable name protocols that can link among themselves and into IPNS . For example IPNS references can ( currently ) point at an IPFS object , and DNS links can ...
kwargs . setdefault ( "opts" , { "recursive" : recursive } ) args = ( name , ) return self . _client . request ( '/resolve' , args , decoder = 'json' , ** kwargs )
def modify_environment ( self , environment_id , ** kwargs ) : '''modify _ environment ( self , environment _ id , * * kwargs ) Modifies an existing environment : Parameters : * * environment _ id * ( ` string ` ) - - The environment identifier Keywords args : The variables to change in the environment ...
request_data = { 'id' : environment_id } request_data . update ( ** kwargs ) return self . _call_rest_api ( 'post' , '/environments' , data = request_data , error = 'Failed to modify environment' )
def load_netcdf4 ( fnames = None , strict_meta = False , file_format = None , epoch_name = 'Epoch' , units_label = 'units' , name_label = 'long_name' , notes_label = 'notes' , desc_label = 'desc' , plot_label = 'label' , axis_label = 'axis' , scale_label = 'scale' , min_label = 'value_min' , max_label = 'value_max' , f...
import netCDF4 import string import pysat if fnames is None : raise ValueError ( "Must supply a filename/list of filenames" ) if isinstance ( fnames , basestring ) : fnames = [ fnames ] if file_format is None : file_format = 'NETCDF4' else : file_format = file_format . upper ( ) saved_mdata = None runni...
def get_connections ( self , id , connection_name , ** args ) : """Fetches the connections for given object ."""
return self . request ( "{0}/{1}/{2}" . format ( self . version , id , connection_name ) , args )
def convert_item_to_flask_url ( self , ctx , item , filepath = None ) : """Given a relative reference like ` foo / bar . css ` , returns the Flask static url . By doing so it takes into account blueprints , i . e . in the aformentioned example , ` ` foo ` ` may reference a blueprint . If an absolute path is...
if ctx . environment . _app . config . get ( "FLASK_ASSETS_USE_S3" ) : try : from flask_s3 import url_for except ImportError as e : print ( "You must have Flask S3 to use FLASK_ASSETS_USE_S3 option" ) raise e elif ctx . environment . _app . config . get ( "FLASK_ASSETS_USE_CDN" ) : t...
def email_finder ( self , domain = None , company = None , first_name = None , last_name = None , full_name = None , raw = False ) : """Find the email address of a person given its name and company ' s domain . : param domain : The domain of the company where the person works . Must be defined if company is not...
params = self . base_params if not domain and not company : raise MissingCompanyError ( 'You must supply at least a domain name or a company name' ) if domain : params [ 'domain' ] = domain elif company : params [ 'company' ] = company if not ( first_name and last_name ) and not full_name : raise Missin...
def _process_project_transfer ( self , action , transfer_id , status_comment ) : """Send PUT request to one of the project transfer action endpoints : param action : str name of the action ( reject / accept / cancel ) : param transfer _ id : str uuid of the project _ transfer : param status _ comment : str co...
data = { } if status_comment : data [ "status_comment" ] = status_comment path = "/project_transfers/{}/{}" . format ( transfer_id , action ) return self . _put ( path , data , content_type = ContentType . form )
def html_init ( name ) : """Return HTML report file first lines . : param name : name of file : type name : str : return : html _ init as str"""
result = "" result += "<html>\n" result += "<head>\n" result += "<title>" + str ( name ) + "</title>\n" result += "</head>\n" result += "<body>\n" result += '<h1 style="border-bottom:1px solid ' 'black;text-align:center;">PyCM Report</h1>' return result
def fire ( self , args , kwargs ) : """Fire this signal with the specified arguments and keyword arguments . Typically this is used by using : meth : ` _ _ call _ _ ( ) ` on this object which is more natural as it does all the argument packing / unpacking transparently ."""
for info in self . _listeners [ : ] : if info . pass_signal : info . listener ( * args , signal = self , ** kwargs ) else : info . listener ( * args , ** kwargs )
def random_sample ( obj , n_samples , seed = None ) : """Create a random array by sampling a ROOT function or histogram . Parameters obj : TH [ 1 | 2 | 3 ] or TF [ 1 | 2 | 3] The ROOT function or histogram to sample . n _ samples : positive int The number of random samples to generate . seed : None , po...
import ROOT if n_samples <= 0 : raise ValueError ( "n_samples must be greater than 0" ) if seed is not None : if seed < 0 : raise ValueError ( "seed must be positive or 0" ) ROOT . gRandom . SetSeed ( seed ) # functions if isinstance ( obj , ROOT . TF1 ) : if isinstance ( obj , ROOT . TF3 ) : ...
def draw_lines ( ) : """Draws a line between a set of random values"""
r = numpy . random . randn ( 200 ) fig = pyplot . figure ( ) ax = fig . add_subplot ( 111 ) ax . plot ( r ) ax . grid ( True ) pyplot . savefig ( lines_filename )
def create_custom_field ( self , field_name , data_type , options = [ ] , visible_in_preference_center = True ) : """Creates a new custom field for this list ."""
body = { "FieldName" : field_name , "DataType" : data_type , "Options" : options , "VisibleInPreferenceCenter" : visible_in_preference_center } response = self . _post ( self . uri_for ( "customfields" ) , json . dumps ( body ) ) return json_to_py ( response )
def update_serial ( self , new_serial ) : """Updates the serial number of a device . The " serial number " used with adb ' s ` - s ` arg is not necessarily the actual serial number . For remote devices , it could be a combination of host names and port numbers . This is used for when such identifier of remo...
new_serial = str ( new_serial ) if self . has_active_service : raise DeviceError ( self , 'Cannot change device serial number when there is service running.' ) if self . _debug_tag == self . serial : self . _debug_tag = new_serial self . _serial = new_serial self . adb . serial = new_serial self . fastboot . se...
def _build_tree ( self ) : """Build a full or a partial tree , depending on the groups / sub - groups specified ."""
groups = self . _groups or self . get_children_paths ( self . root_path ) for group in groups : node = Node ( name = group , parent = self . root ) self . root . children . append ( node ) self . _init_sub_groups ( node )
def create_transcript_file ( video_id , language_code , file_format , resource_fs , static_dir ) : """Writes transcript file to file system . Arguments : video _ id ( str ) : Video id of the video transcript file is attached . language _ code ( str ) : Language code of the transcript . file _ format ( str )...
transcript_filename = '{video_id}-{language_code}.srt' . format ( video_id = video_id , language_code = language_code ) transcript_data = get_video_transcript_data ( video_id , language_code ) if transcript_data : transcript_content = Transcript . convert ( transcript_data [ 'content' ] , input_format = file_format...
def cast_callback ( value ) : """Override ` cast _ callback ` method ."""
# Postgresql / MySQL drivers change the format on ' TIMESTAMP ' columns ; if 'T' in value : value = value . replace ( 'T' , ' ' ) return datetime . strptime ( value . split ( '.' ) [ 0 ] , '%Y-%m-%d %H:%M:%S' )
def csv_to_PyDbLite ( src , dest , fieldnames = None , fieldtypes = None , dialect = 'excel' ) : """Convert a CSV file to a PyDbLite base src is the file object from which csv values are read dest is the name of the PyDbLite base If fieldnames is not set , the CSV file * must * have row names in the first l...
import csv import PyDbLite if not fieldnames : _in = csv . DictReader ( open ( src ) , fieldnames = fieldnames ) _in . next ( ) fieldnames = _in . fieldnames out = PyDbLite . Base ( dest ) kw = { "mode" : "override" } out . create ( * _in . fieldnames , ** kw ) default_fieldtypes = { "__id__" : int , "__ver...
async def _run_state ( self , responder , state , trigger , request ) -> BaseState : """Execute the state , or if execution fails handle it ."""
user_trigger = trigger # noinspection PyBroadException try : if trigger : await state . handle ( ) else : await state . confused ( ) for i in range ( 0 , settings . MAX_INTERNAL_JUMPS + 1 ) : if i == settings . MAX_INTERNAL_JUMPS : raise MaxInternalJump ( ) trigge...
def __exists ( self , p ) : """Check if file of given path exists . Parameters p : str or tuple Path or tuple identifier . Returns exists : bool ` ` True ` ` , if file exists . Otherwise ` ` False ` ` ."""
try : p = self . __pathToTuple ( p ) except TypeError : pass return ( ( not p [ 0 ] and not p [ 1 ] ) or ( p [ 0 ] in self . searches and not p [ 1 ] ) or ( p [ 0 ] in self . searches and p [ 1 ] in self . searches [ p [ 0 ] ] ) )
def __build_export ( self , stats ) : """Build the export lists ."""
export_names = [ ] export_values = [ ] if isinstance ( stats , dict ) : # Stats is a dict # Is there a key ? if 'key' in iterkeys ( stats ) and stats [ 'key' ] in iterkeys ( stats ) : pre_key = '{}.' . format ( stats [ stats [ 'key' ] ] ) else : pre_key = '' # Walk through the dict for k...
def norm_to_uniform ( im , scale = None ) : r"""Take an image with normally distributed greyscale values and converts it to a uniform ( i . e . flat ) distribution . It ' s also possible to specify the lower and upper limits of the uniform distribution . Parameters im : ND - image The image containing the...
if scale is None : scale = [ im . min ( ) , im . max ( ) ] im = ( im - sp . mean ( im ) ) / sp . std ( im ) im = 1 / 2 * sp . special . erfc ( - im / sp . sqrt ( 2 ) ) im = ( im - im . min ( ) ) / ( im . max ( ) - im . min ( ) ) im = im * ( scale [ 1 ] - scale [ 0 ] ) + scale [ 0 ] return im
def _standalone ( argv ) : """Parse the given input directory and emit generated code ."""
varprefix = "GEOCODE" per_locale = True separator = None chunks = - 1 try : opts , args = getopt . getopt ( argv , "hv:fs:c:" , ( "help" , "var=" , "flat" , "sep=" , "chunks=" ) ) except getopt . GetoptError : prnt ( __doc__ , file = sys . stderr ) sys . exit ( 1 ) for opt , arg in opts : if opt in ( "-...
def create_copy ( self ) : """Initialises a temporary directory structure and copy of MAGICC configuration files and binary ."""
if self . executable is None or not isfile ( self . executable ) : raise FileNotFoundError ( "Could not find MAGICC{} executable: {}" . format ( self . version , self . executable ) ) if self . is_temp : assert ( self . root_dir is None ) , "A temp copy for this instance has already been created" self . roo...
def items ( self ) -> Iterable [ Tuple [ str , Any ] ] : """An iterable of ( name , value ) pairs . . . versionadded : : 3.1"""
return [ ( opt . name , opt . value ( ) ) for name , opt in self . _options . items ( ) ]
def _get_asset_size ( self , asset_type ) : """Helper function to dynamically create * _ size properties ."""
if asset_type == 'page' : assets = self . entries else : assets = getattr ( self , '{0}_files' . format ( asset_type ) , None ) return self . get_total_size ( assets )
def serialize ( self ) : """Serializes the node data as a JSON map string ."""
return json . dumps ( { "port" : self . port , "ip" : self . ip , "host" : self . host , "peer" : self . peer . serialize ( ) if self . peer else None , "metadata" : json . dumps ( self . metadata or { } , sort_keys = True ) , } , sort_keys = True )
def retry_count ( self ) : """Amount of retried test cases in this list . : return : integer"""
retries = len ( [ i for i , result in enumerate ( self . data ) if result . retries_left > 0 ] ) return retries
def waitForNextState ( self ) : '''After each command has been sent we wait for the observation to change as expected and a frame .'''
# wait for the observation position to have changed print ( 'Waiting for observation...' , end = ' ' ) while True : world_state = self . agent_host . peekWorldState ( ) if not world_state . is_mission_running : print ( 'mission ended.' ) break if not all ( e . text == '{}' for e in world_sta...
def intersection ( self , other ) : "intersection with another patch"
res = { } if set ( self . sets . keys ( ) ) != set ( other . sets . keys ( ) ) : raise KeyError ( 'Incompatible patches in intersection' ) for name , s1 in self . sets . items ( ) : s2 = other . sets [ name ] res [ name ] = s1 . intersection ( s2 ) return Patch ( res )
def linreg ( x , y ) : """does a linear regression"""
if len ( x ) != len ( y ) : print ( 'x and y must be same length' ) return xx , yy , xsum , ysum , xy , n , sum = 0 , 0 , 0 , 0 , 0 , len ( x ) , 0 linpars = { } for i in range ( n ) : xx += x [ i ] * x [ i ] yy += y [ i ] * y [ i ] xy += x [ i ] * y [ i ] xsum += x [ i ] ysum += y [ i ] ...
def get ( self ) : """Gets the next item from the queue . Returns a Future that resolves to the next item once it is available ."""
io_loop = IOLoop . current ( ) new_get = Future ( ) with self . _lock : get , self . _get = self . _get , new_get answer = Future ( ) def _on_node ( future ) : if future . exception ( ) : # pragma : no cover ( never happens ) return answer . set_exc_info ( future . exc_info ( ) ) node = future . res...
def assertFileSizeLess ( self , filename , size , msg = None ) : '''Fail if ` ` filename ` ` ' s size is not less than ` ` size ` ` as determined by the ' < ' operator . Parameters filename : str , bytes , file - like size : int , float msg : str If not provided , the : mod : ` marbles . mixins ` or :...
fsize = self . _get_file_size ( filename ) self . assertLess ( fsize , size , msg = msg )
def from_directory ( filepath , from_methods , * , name = None , parent = None , verbose = True ) : """Create a WrightTools Collection from a directory of source files . Parameters filepath : path - like Path to the directory on the file system from _ methods : dict < str , callable > Dictionary which map...
filepath = pathlib . Path ( filepath ) . resolve ( ) if name is None : name = filepath . name if verbose : print ( "Creating Collection:" , name ) root = Collection ( name = name , parent = parent ) q = queue . Queue ( ) for i in filepath . iterdir ( ) : q . put ( ( filepath , i . name , root ) ) while not ...
def handle_exec_method ( self , msg ) : """Handle data returned by silent executions of kernel methods This is based on the _ handle _ exec _ callback of RichJupyterWidget . Therefore this is licensed BSD ."""
user_exp = msg [ 'content' ] . get ( 'user_expressions' ) if not user_exp : return for expression in user_exp : if expression in self . _kernel_methods : # Process kernel reply method = self . _kernel_methods [ expression ] reply = user_exp [ expression ] data = reply . get ( 'data' ) ...
def axisar ( axis , angle ) : """Construct a rotation matrix that rotates vectors by a specified angle about a specified axis . http : / / naif . jpl . nasa . gov / pub / naif / toolkit _ docs / C / cspice / axisar _ c . html : param axis : Rotation axis . : type axis : 3 Element vector ( list , tuple , num...
axis = stypes . toDoubleVector ( axis ) angle = ctypes . c_double ( angle ) r = stypes . emptyDoubleMatrix ( ) libspice . axisar_c ( axis , angle , r ) return stypes . cMatrixToNumpy ( r )
def _init_conn ( self ) : """This method will be called after ` connect ` is called . After this method finishes , the writer will be drained . Subclasses should make use of this if they need to send data to Telegram to indicate which connection mode will be used ."""
if self . _codec . tag : self . _writer . write ( self . _codec . tag )
def get_filters ( self , request , ** resources ) : """Make filters from GET variables . : return dict : filters"""
filters = dict ( ) if not self . _meta . fields : return filters for field in request . GET . iterkeys ( ) : tokens = field . split ( LOOKUP_SEP ) field_name = tokens [ 0 ] if field_name not in self . _meta . fields : continue exclude = False if tokens [ - 1 ] == 'not' : exclude ...