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def _threaded_callback ( callback , * args ) : """Internal wrapper to start a callback in threaded mode . Using the daemon mode to not block the main thread from exiting ."""
t = Thread ( target = callback , args = args ) t . daemon = True t . start ( )
def generate_filename ( self , requirement ) : """Generate a distribution archive filename for a package . : param requirement : A : class : ` . Requirement ` object . : returns : The filename of the distribution archive ( a string ) including a single leading directory component to indicate the cache forma...
return FILENAME_PATTERN % ( self . config . cache_format_revision , requirement . name , requirement . version , get_python_version ( ) )
def protect ( allow_browser_login = False ) : """Use this decorator to enable granular security permissions to your API methods ( BaseApi and child classes ) . Permissions will be associated to a role , and roles are associated to users . allow _ browser _ login will accept signed cookies obtained from the no...
def _protect ( f ) : if hasattr ( f , '_permission_name' ) : permission_str = f . _permission_name else : permission_str = f . __name__ def wraps ( self , * args , ** kwargs ) : permission_str = "{}{}" . format ( PERMISSION_PREFIX , f . _permission_name ) class_permission_nam...
def get_db_prep_value ( self , value , connection , prepared = False ) : """Prepare a value for DB interaction . Returns : - list ( bytes ) if not prepared - list ( str ) if prepared"""
if prepared : return value if value is None : return [ ] values = value if self . multi_valued_field else [ value ] prepared_values = [ self . get_prep_value ( v ) for v in values ] # Remove duplicates . # https : / / tools . ietf . org / html / rfc4511 # section - 4.1.7 : # " The set of attribute values is uno...
def enough_input ( layer , post_processor_input ) : """Check if the input from impact _ fields in enough . : param layer : The vector layer to use for post processing . : type layer : QgsVectorLayer : param post _ processor _ input : Collection of post processor input requirements . : type post _ processo...
impact_fields = list ( layer . keywords [ 'inasafe_fields' ] . keys ( ) ) for input_key , input_values in list ( post_processor_input . items ( ) ) : input_values = ( input_values if isinstance ( input_values , list ) else [ input_values ] ) msg = None for input_value in input_values : is_constant_i...
def _g_1 ( self ) : """omega1 < omega < omega2"""
# return 3 * self . _ n _ 1 ( ) / ( self . _ omega - self . _ vertices _ omegas [ 0 ] ) return ( 3 * self . _f ( 1 , 0 ) * self . _f ( 2 , 0 ) / ( self . _vertices_omegas [ 3 ] - self . _vertices_omegas [ 0 ] ) )
def _get_title ( self , directory , filename ) : """Loads image title if any"""
# = = = = = LOAD TITLE = = = = = fullfile = os . path . join ( directory , filename + '.title' ) try : logger . debug ( 'trying to open [%s]' % ( fullfile ) ) _title = ( open ( fullfile ) . readline ( ) . strip ( ) ) logger . debug ( "_updatemeta: %s - title is '%s'" , filename , _title ) except : _titl...
def _create_json ( self ) : """JSON Documentation : https : / / www . jfrog . com / confluence / display / RTF / Security + Configuration + JSON"""
data_json = { 'name' : self . name , 'email' : self . email , 'password' : self . password , 'admin' : self . admin , "profileUpdatable" : self . profileUpdatable , "internalPasswordDisabled" : self . internalPasswordDisabled , "groups" : self . _groups , } return data_json
def create ( self , using = None , ** kwargs ) : """Creates the index in elasticsearch . Any additional keyword arguments will be passed to ` ` Elasticsearch . indices . create ` ` unchanged ."""
self . _get_connection ( using ) . indices . create ( index = self . _name , body = self . to_dict ( ) , ** kwargs )
def get_column ( self , X , column ) : """Return a column of the given matrix . Args : X : ` numpy . ndarray ` or ` pandas . DataFrame ` . column : ` int ` or ` str ` . Returns : np . ndarray : Selected column ."""
if isinstance ( X , pd . DataFrame ) : return X [ column ] . values return X [ : , column ]
def aliases_categories ( chr ) : """Retrieves the script block alias and unicode category for a unicode character . > > > categories . aliases _ categories ( ' A ' ) ( ' LATIN ' , ' L ' ) > > > categories . aliases _ categories ( ' τ ' ) ( ' GREEK ' , ' L ' ) > > > categories . aliases _ categories ( ' - ...
l = 0 r = len ( categories_data [ 'code_points_ranges' ] ) - 1 c = ord ( chr ) # binary search while r >= l : m = ( l + r ) // 2 if c < categories_data [ 'code_points_ranges' ] [ m ] [ 0 ] : r = m - 1 elif c > categories_data [ 'code_points_ranges' ] [ m ] [ 1 ] : l = m + 1 else : ...
def _parse_query_key ( self , key , val , is_escaped ) : """Strips query modifier from key and call ' s the appropriate value modifier . Args : key ( str ) : Query key val : Query value Returns : Parsed query key and value ."""
if key . endswith ( '__contains' ) : key = key [ : - 10 ] val = self . _parse_query_modifier ( 'contains' , val , is_escaped ) elif key . endswith ( '__range' ) : key = key [ : - 7 ] val = self . _parse_query_modifier ( 'range' , val , is_escaped ) elif key . endswith ( '__startswith' ) : key = key ...
def to_triple ( self , ast_obj = None , fmt = "medium" ) : """Convert AST object to BEL triple Args : fmt ( str ) : short , medium , long formatted BEL statements short = short function and short relation format medium = short function and long relation format long = long function and long relation format...
if not ast_obj : ast_obj = self if self . bel_subject and self . bel_relation and self . bel_object : if self . bel_relation . startswith ( "has" ) : bel_relation = self . bel_relation elif fmt == "short" : bel_relation = self . spec [ "relations" ] [ "to_short" ] . get ( self . bel_relation...
def get_killer ( args ) : """Returns a KillerBase instance subclassed based on the OS ."""
if POSIX : log . debug ( 'Platform: POSIX' ) from killer . killer_posix import KillerPosix return KillerPosix ( config_path = args . config , debug = args . debug ) elif WINDOWS : log . debug ( 'Platform: Windows' ) from killer . killer_windows import KillerWindows return KillerWindows ( config_...
def OnInit ( self ) : """Initialize by creating the split window with the tree"""
project = compass . CompassProjectParser ( sys . argv [ 1 ] ) . parse ( ) frame = MyFrame ( None , - 1 , 'wxCompass' , project ) frame . Show ( True ) self . SetTopWindow ( frame ) return True
def GetDatabaseAccount ( self , url_connection = None ) : """Gets database account info . : return : The Database Account . : rtype : documents . DatabaseAccount"""
if url_connection is None : url_connection = self . url_connection initial_headers = dict ( self . default_headers ) headers = base . GetHeaders ( self , initial_headers , 'get' , '' , # path '' , # id '' , # type { } ) request = request_object . _RequestObject ( 'databaseaccount' , documents . _OperationType . Rea...
def p_genvardecl ( self , p ) : 'genvardecl : GENVAR genvarlist SEMICOLON'
p [ 0 ] = Decl ( p [ 2 ] , lineno = p . lineno ( 1 ) ) p . set_lineno ( 0 , p . lineno ( 1 ) )
def reduce_activities ( self ) : """Rewrite the activity types referenced in Statements for consistency . Activity types are reduced to the most specific form whenever possible . For instance , if ' kinase ' is the only specific activity type known for the BaseAgent of BRAF , its generic ' activity ' forms ar...
for stmt in self . statements : agents = stmt . agent_list ( ) for agent in agents : if agent is not None and agent . activity is not None : agent_base = self . _get_base ( agent ) act_red = agent_base . get_activity_reduction ( agent . activity . activity_type ) if a...
def get_courses_metadata ( self ) : """Gets the metadata for the courses . return : ( osid . Metadata ) - metadata for the courses * compliance : mandatory - - This method must be implemented . *"""
# Implemented from template for osid . learning . ActivityForm . get _ assets _ metadata _ template metadata = dict ( self . _mdata [ 'courses' ] ) metadata . update ( { 'existing_courses_values' : self . _my_map [ 'courseIds' ] } ) return Metadata ( ** metadata )
def create ( self , create_missing = None ) : """Manually fetch a complete set of attributes for this entity . For more information , see ` Bugzilla # 1449749 < https : / / bugzilla . redhat . com / show _ bug . cgi ? id = 1449749 > ` _ ."""
return Host ( self . _server_config , id = self . create_json ( create_missing ) [ 'id' ] , ) . read ( )
def _mark_target ( type , item ) : """Wrap given item as input or output target that should be added to task . Wrapper object will be handled specially in : paramref : ` create _ cmd _ task . parts ` . : param type : Target type . Allowed values : - ' input ' - ' output ' : param item : Item to mark as ...
# If given type is not valid if type not in ( 'input' , 'output' ) : # Get error message msg = 'Error (7D74X): Type is not valid: {0}' . format ( type ) # Raise error raise ValueError ( msg ) # If given type is valid . # Store given item orig_item = item # If given path is list if isinstance ( item , list )...
def _readline_echo ( self , char , echo ) : """Echo a recieved character , move cursor etc . . ."""
if self . _readline_do_echo ( echo ) : self . write ( char )
def stop ( args ) : """% prog stop Stop EC2 instance ."""
p = OptionParser ( stop . __doc__ ) p . add_option ( "--profile" , default = "mvrad-datasci-role" , help = "Profile name" ) opts , args = p . parse_args ( args ) if len ( args ) != 0 : sys . exit ( not p . print_help ( ) ) role ( [ "htang" ] ) session = boto3 . Session ( profile_name = opts . profile ) client = ses...
def filename_for_track ( track ) : """: return : A safe filename for the given track"""
artist = track . user [ 'permalink' ] title = track . title return '{}-{}.mp3' . format ( artist , title ) . lower ( ) . replace ( ' ' , '_' ) . replace ( '/' , '_' )
def get_m2m_popup_field ( cls , * args , ** kwargs ) : """generate m2m field related to class wait popup crud"""
kwargs [ 'popup_name' ] = cls . get_class_verbose_name ( ) kwargs [ 'permissions_required' ] = cls . permissions_required if cls . template_name_m2m is not None : kwargs [ 'template_name' ] = cls . template_name_m2m return ManyToManyWidget ( '{}_popup_create' . format ( cls . get_class_name ( ) ) , * args , ** kwar...
def database ( self , name = None ) : """Connect to a database called ` name ` . Parameters name : str , optional The name of the database to connect to . If ` ` None ` ` , return the database named ` ` self . current _ database ` ` . Returns db : MySQLDatabase An : class : ` ibis . sql . mysql . clie...
if name == self . current_database or ( name is None and name != self . current_database ) : return self . database_class ( self . current_database , self ) else : url = self . con . url client_class = type ( self ) new_client = client_class ( host = url . host , user = url . username , port = url . por...
def logout ( self , subject ) : """Logs out the specified Subject from the system . Note that most application developers should not call this method unless they have a good reason for doing so . The preferred way to logout a Subject is to call ` ` Subject . logout ( ) ` ` , not by calling ` ` SecurityManager...
if ( subject is None ) : msg = "Subject argument cannot be None." raise ValueError ( msg ) self . before_logout ( subject ) identifiers = copy . copy ( subject . identifiers ) # copy is new to yosai if ( identifiers ) : msg = ( "Logging out subject with primary identifier {0}" . format ( identifiers . prima...
def _mprotate ( ang , lny , pool , order ) : """Uses multiprocessing to wrap around _ rotate 4x speedup on an intel i7-3820 CPU @ 3.60GHz with 8 cores . The function calls _ rotate which accesses the ` mprotate _ dict ` . Data is rotated in - place . Parameters ang : float rotation angle in degrees ln...
targ_args = list ( ) slsize = np . int ( np . floor ( lny / ncores ) ) for t in range ( ncores ) : ymin = t * slsize ymax = ( t + 1 ) * slsize if t == ncores - 1 : ymax = lny targ_args . append ( ( ymin , ymax , ang , order ) ) pool . map ( _rotate , targ_args )
def remove_private_obfuscation ( self ) : """removes the python obfuscation of class privates so they can be executed as they appear in class source . Useful when playing with IPython ."""
classname = self . __class__ . __name__ attrlist = [ attr for attr in dir ( self ) if attr . startswith ( '_' + classname + '__' ) ] for attr in attrlist : method = getattr ( self , attr ) truename = attr . replace ( '_' + classname + '__' , '__' ) setattr ( self , truename , method )
def before_save ( file_or_dir ) : """make sure that the dedicated path exists ( create if not exist ) : param file _ or _ dir : : return : None"""
dir_name = os . path . dirname ( os . path . abspath ( file_or_dir ) ) if not os . path . exists ( dir_name ) : os . makedirs ( dir_name )
def load ( self ) : """Extract tabular data as | TableData | instances from a MediaWiki file . | load _ source _ desc _ file | : return : Loaded table data iterator . | load _ table _ name _ desc | Format specifier Value after the replacement ` ` % ( filename ) s ` ` | filename _ desc | ` ` % ( key ) ...
self . _validate ( ) self . _logger . logging_load ( ) self . encoding = get_file_encoding ( self . source , self . encoding ) with io . open ( self . source , "r" , encoding = self . encoding ) as fp : formatter = MediaWikiTableFormatter ( fp . read ( ) ) formatter . accept ( self ) return formatter . to_table_dat...
def GetStopsInBoundingBox ( self , north , east , south , west , n ) : """Return a sample of up to n stops in a bounding box"""
stop_list = [ ] for s in self . stops . values ( ) : if ( s . stop_lat <= north and s . stop_lat >= south and s . stop_lon <= east and s . stop_lon >= west ) : stop_list . append ( s ) if len ( stop_list ) == n : break return stop_list
def estimate_hessian ( objective_func , parameters , lower_bounds = None , upper_bounds = None , step_ratio = 2 , nmr_steps = 5 , max_step_sizes = None , data = None , cl_runtime_info = None ) : """Estimate and return the upper triangular elements of the Hessian of the given function at the given parameters . Thi...
if len ( parameters . shape ) == 1 : parameters = parameters [ None , : ] nmr_voxels = parameters . shape [ 0 ] nmr_params = parameters . shape [ 1 ] nmr_derivatives = nmr_params * ( nmr_params + 1 ) // 2 initial_step = _get_initial_step ( parameters , lower_bounds , upper_bounds , max_step_sizes ) kernel_data = { ...
def generate_strings ( project_base_dir , localization_bundle_path , tmp_directory , exclude_dirs , include_strings_file , special_ui_components_prefix ) : """Calls the builtin ' genstrings ' command with JTLocalizedString as the string to search for , and adds strings extracted from UI elements internationalized...
localization_directory = os . path . join ( localization_bundle_path , DEFAULT_LANGUAGE_DIRECTORY_NAME ) if not os . path . exists ( localization_directory ) : os . makedirs ( localization_directory ) localization_file = os . path . join ( localization_directory , LOCALIZATION_FILENAME ) # Creating the same directo...
def build_stereographic_projection ( center ) : """Compute * x * and * y * coordinates at which to plot the positions ."""
# TODO : Computing the center should really be done using # optimization , as in : # https : / / math . stackexchange . com / questions / 409217/ p = center . position . au u = p / length_of ( p ) c = u . mean ( axis = 1 ) c = c / length_of ( c ) x_c , y_c , z_c = c def project ( position ) : p = position . positio...
def activated ( self , include_extras = True , extra_dists = [ ] ) : """A context manager which activates the virtualenv . : param list extra _ dists : Paths added to the context after the virtualenv is activated . This context manager sets the following environment variables : * ` PYTHONUSERBASE ` * ` VIRT...
original_path = sys . path original_prefix = sys . prefix original_user_base = os . environ . get ( "PYTHONUSERBASE" , None ) original_venv = os . environ . get ( "VIRTUAL_ENV" , None ) parent_path = vistir . compat . Path ( __file__ ) . absolute ( ) . parent . parent . as_posix ( ) prefix = self . prefix . as_posix ( ...
def plot_correlation_heatmap ( self ) : """Return HTML for correlation heatmap"""
data = None corr_type = None correlation_type = getattr ( config , 'rna_seqc' , { } ) . get ( 'default_correlation' , 'spearman' ) if self . rna_seqc_spearman is not None and correlation_type != 'pearson' : data = self . rna_seqc_spearman corr_type = 'Spearman' elif self . rna_seqc_pearson is not None : dat...
def action_getattr ( ) : """Creates a getter that will drop the current value and retrieve the action ' s attribute with the context key as name ."""
def action_getattr ( _value , context , ** _params ) : value = getattr ( context [ "action" ] , context [ "key" ] ) return _attr ( value ) return action_getattr
def compliance_violation ( self , column = None , value = None , ** kwargs ) : """A compliance schedule violation reflects the non - achievement of a given compliance schedule event including the type of violation and ty pe of resolution . > > > PCS ( ) . compliance _ violation ( ' cs _ rnc _ detect _ date ' ...
return self . _resolve_call ( 'PCS_CMPL_SCHD_VIOL' , column , value , ** kwargs )
def eth_getBlockByNumber ( self , block = BLOCK_TAG_LATEST , tx_objects = True ) : """https : / / github . com / ethereum / wiki / wiki / JSON - RPC # eth _ getblockbynumber : param block : Block tag or number ( optional ) : type block : int or BLOCK _ TAGS : param tx _ objects : Return txs full object ( opti...
block = validate_block ( block ) result = yield from self . rpc_call ( 'eth_getBlockByNumber' , [ block , tx_objects ] ) # TODO : Update result response return result
def point_rotate ( pt , ax , theta ) : """Rotate a 3 - D point around a 3 - D axis through the origin . Handedness is a counter - clockwise rotation when viewing the rotation axis as pointing at the observer . Thus , in a right - handed x - y - z frame , a 90deg rotation of ( 1,0,0 ) around the z - axis ( 0,0...
# Imports import numpy as np # Ensure pt is reducible to 3 - D vector . pt = make_nd_vec ( pt , nd = 3 , t = np . float64 , norm = False ) # Calculate the rotation rot_pt = np . dot ( mtx_rot ( ax , theta , reps = 1 ) , pt ) # Should be ready to return return rot_pt
def _balance ( self , ) : """calc unbalanced charges and radicals for skin atoms"""
meta = h . meta for n in ( skin_reagent . keys ( ) | skin_product . keys ( ) ) : lost = skin_reagent [ n ] cycle_lost = cycle ( lost ) new = skin_product [ n ] cycle_new = cycle ( new ) atom = h . _node [ n ] dr = atom . p_radical - atom . radical # radical balancing if dr > 0 : # radica...
def set_dchans ( self , dchans = None , method = 'set' ) : """Set ( or update ) the dchans dict dchans is a dict of np . ndarrays of len ( ) = self . nch containing channel - specific information Use the kwarg ' method ' to set / update the dict"""
assert method in [ 'set' , 'update' ] dchans = self . _checkformat_inputs_dchans ( dchans = dchans ) if method == 'set' : self . _dchans = dchans else : self . _dchans . update ( dchans )
def check_input ( self , obj ) : """Performs checks on the input object . Raises an exception if unsupported . : param obj : the object to check : type obj : object"""
if isinstance ( obj , str ) : return if isinstance ( obj , unicode ) : return raise Exception ( "Unsupported class: " + self . _input . __class__ . __name__ )
def set_default_loader ( loader ) : """Set defaulr loader instance Parameters loader : instance or string An instance or registered name of loader class . The specified loader instance will be used when user did not specified : attr : ` loader ` in : func : ` maidenhair . functions . load ` function . S...
if isinstance ( loader , basestring ) : loader = registry . find ( loader ) ( ) if not isinstance ( loader , BaseLoader ) : loader = loader ( ) global _loader _loader = loader
def exchange_to_margin ( self , symbol , currency , amount , _async = False ) : """现货账户划入至借贷账户 : param amount : : param currency : : param symbol : : return :"""
params = { 'symbol' : symbol , 'currency' : currency , 'amount' : amount } path = '/v1/dw/transfer-in/margin' return api_key_post ( params , path , _async = _async )
def set_cores_massive ( self , filename = 'core_masses_massive.txt' ) : '''Uesse function cores in nugridse . py'''
core_info = [ ] minis = [ ] for i in range ( len ( self . runs_H5_surf ) ) : sefiles = se ( self . runs_H5_out [ i ] ) mini = sefiles . get ( 'mini' ) minis . append ( mini ) incycle = int ( sefiles . se . cycles [ - 1 ] ) core_info . append ( sefiles . cores ( incycle = incycle ) ) print_info = '' ...
def plotDataframe ( table , title , plotPath ) : """Plot Panda dataframe . : param table : Panda dataframe returned by : func : ` analyzeWeightPruning ` : type table : : class : ` pandas . DataFrame ` : param title : Plot title : type title : str : param plotPath : Plot full path : type plotPath : str""...
plt . figure ( ) axes = table . T . plot ( subplots = True , sharex = True , grid = True , legend = True , title = title , figsize = ( 8 , 11 ) ) # Use fixed scale for " accuracy " accuracy = next ( ax for ax in axes if ax . lines [ 0 ] . get_label ( ) == 'accuracy' ) accuracy . set_ylim ( 0.0 , 1.0 ) plt . savefig ( p...
def compare_user ( passed_user = None , user_list = None ) : """Check if supplied User instance exists in supplied Users list and , if so , return the differences . args : passed _ user ( User ) : the user instance to check for differences user _ list ( Users ) : the Users instance containing a list of Users ...
# Check if user exists returned = user_list . describe_users ( users_filter = dict ( name = passed_user . name ) ) replace_keys = False # User exists , so compare attributes comparison_result = dict ( ) if passed_user . uid and ( not returned [ 0 ] . uid == passed_user . uid ) : comparison_result [ 'uid_action' ] =...
def crosstab ( self , col1 , col2 ) : """Computes a pair - wise frequency table of the given columns . Also known as a contingency table . The number of distinct values for each column should be less than 1e4 . At most 1e6 non - zero pair frequencies will be returned . The first column of each row will be the...
if not isinstance ( col1 , basestring ) : raise ValueError ( "col1 should be a string." ) if not isinstance ( col2 , basestring ) : raise ValueError ( "col2 should be a string." ) return DataFrame ( self . _jdf . stat ( ) . crosstab ( col1 , col2 ) , self . sql_ctx )
def process_input ( netIn , allowedformats , outputformat = 'G' ) : """Takes input network and checks what the input is . Parameters netIn : array , dict , or TemporalNetwork Network ( graphlet , contact or object ) allowedformats : str Which format of network objects that are allowed . Options : ' C ' , ...
inputtype = checkInput ( netIn ) # Convert TN to G representation if inputtype == 'TN' and 'TN' in allowedformats and outputformat != 'TN' : G = netIn . df_to_array ( ) netInfo = { 'nettype' : netIn . nettype , 'netshape' : netIn . netshape } elif inputtype == 'TN' and 'TN' in allowedformats and outputformat ==...
def get_user_info ( self , request ) : """Implement custom getter ."""
if not current_user . is_authenticated : return { } user_info = { 'id' : current_user . get_id ( ) , } if 'SENTRY_USER_ATTRS' in current_app . config : for attr in current_app . config [ 'SENTRY_USER_ATTRS' ] : if hasattr ( current_user , attr ) : user_info [ attr ] = getattr ( current_user ...
def _ReadBooleanDataTypeDefinition ( self , definitions_registry , definition_values , definition_name , is_member = False ) : """Reads a boolean data type definition . Args : definitions _ registry ( DataTypeDefinitionsRegistry ) : data type definitions registry . definition _ values ( dict [ str , object ...
return self . _ReadFixedSizeDataTypeDefinition ( definitions_registry , definition_values , data_types . BooleanDefinition , definition_name , self . _SUPPORTED_ATTRIBUTES_BOOLEAN , is_member = is_member , supported_size_values = ( 1 , 2 , 4 ) )
def next_trials ( self ) : """Provides Trial objects to be queued into the TrialRunner . Returns : trials ( list ) : Returns a list of trials ."""
trials = list ( self . _trial_generator ) if self . _shuffle : random . shuffle ( trials ) self . _finished = True return trials
def make_tag ( cls , tag_name ) : """Make a Tag object from a tag name . Registers it with the content manager if possible ."""
if cls . cm : return cls . cm . make_tag ( tag_name ) return Tag ( tag_name . strip ( ) )
def revisit ( self , node , include_self = True ) : """Revisit a node in the future . As a result , the successors to this node will be revisited as well . : param node : The node to revisit in the future . : return : None"""
successors = self . successors ( node ) # , skip _ reached _ fixedpoint = True ) if include_self : self . _sorted_nodes . add ( node ) for succ in successors : self . _sorted_nodes . add ( succ ) # reorder it self . _sorted_nodes = OrderedSet ( sorted ( self . _sorted_nodes , key = lambda n : self . _node_to_in...
def _get_sorted_go2nt ( self , go2nt , sortby ) : """Return sorted list of tuples ."""
if sortby is True : _fnc = self . get_fncsortnt ( ) return sorted ( go2nt . items ( ) , key = lambda t : _fnc ( t [ 1 ] ) ) if sortby : return sorted ( go2nt . items ( ) , key = lambda t : sortby ( t [ 1 ] ) ) return go2nt . items ( )
def mkstemp ( * args , ** kwargs ) : """Context manager similar to tempfile . NamedTemporaryFile except the file is not deleted on close , and only the filepath is returned . . warnings : : Unlike tempfile . mkstemp , this is not secure"""
fd , filename = tempfile . mkstemp ( * args , ** kwargs ) os . close ( fd ) try : yield filename finally : os . remove ( filename )
def _repeat_1d ( x , K , out ) : '''Repeats each element of a vector many times and repeats the whole result many times Parameters x : ndarray ( ndim = 1) vector to be repeated K : scalar ( int ) number of times each element of x is repeated ( inner iterations ) out : ndarray ( ndim = 1) placeholder...
N = x . shape [ 0 ] L = out . shape [ 0 ] // ( K * N ) # number of outer iterations # K # number of inner iterations # the result out should enumerate in C - order the elements # of a 3 - dimensional array T of dimensions ( K , N , L ) # such that for all k , n , l , we have T [ k , n , l ] = = x [ n ] for n in range (...
def division_name ( self ) : """The type designation for the county or county equivalent , such as ' County ' , ' Parish ' or ' Borough '"""
try : return next ( e for e in self . type_names_re . search ( self . name ) . groups ( ) if e is not None ) except AttributeError : # The search will fail for ' District of Columbia ' return ''
def hist_calls ( fn ) : """Decorator to check the distribution of return values of a function ."""
@ functools . wraps ( fn ) def wrapper ( * args , ** kwargs ) : _histogram = histogram ( "%s_calls" % pyformance . registry . get_qualname ( fn ) ) rtn = fn ( * args , ** kwargs ) if type ( rtn ) in ( int , float ) : _histogram . add ( rtn ) return rtn return wrapper
def exec_stmt_handle ( self , tokens ) : """Process Python - 3 - style exec statements ."""
internal_assert ( 1 <= len ( tokens ) <= 3 , "invalid exec statement tokens" , tokens ) if self . target . startswith ( "2" ) : out = "exec " + tokens [ 0 ] if len ( tokens ) > 1 : out += " in " + ", " . join ( tokens [ 1 : ] ) return out else : return "exec(" + ", " . join ( tokens ) + ")"
def save_to_mat_file ( self , parameter_space , result_parsing_function , filename , runs ) : """Return the results relative to the desired parameter space in the form of a . mat file . Args : parameter _ space ( dict ) : dictionary containing parameter / list - of - values pairs . result _ parsing _ func...
# Make sure all values are lists for key in parameter_space : if not isinstance ( parameter_space [ key ] , list ) : parameter_space [ key ] = [ parameter_space [ key ] ] # Add a dimension label for each non - singular dimension dimension_labels = [ { key : str ( parameter_space [ key ] ) } for key in param...
def prepare_request_body ( self , username , password , body = '' , scope = None , include_client_id = False , ** kwargs ) : """Add the resource owner password and username to the request body . The client makes a request to the token endpoint by adding the following parameters using the " application / x - www...
kwargs [ 'client_id' ] = self . client_id kwargs [ 'include_client_id' ] = include_client_id return prepare_token_request ( self . grant_type , body = body , username = username , password = password , scope = scope , ** kwargs )
def set_advanced_configs ( vm_name , datacenter , advanced_configs , service_instance = None ) : '''Appends extra config parameters to a virtual machine advanced config list vm _ name Virtual machine name datacenter Datacenter name where the virtual machine is available advanced _ configs Dictionary wit...
current_config = get_vm_config ( vm_name , datacenter = datacenter , objects = True , service_instance = service_instance ) diffs = compare_vm_configs ( { 'name' : vm_name , 'advanced_configs' : advanced_configs } , current_config ) datacenter_ref = salt . utils . vmware . get_datacenter ( service_instance , datacenter...
def get_settings ( self , * args , ** kwargs ) : """Return the settings for this wiki page . Includes permission level , names of editors , and whether the page is listed on / wiki / pages . Additional parameters are passed into : meth : ` ~ praw . _ _ init _ _ . BaseReddit . request _ json `"""
url = self . reddit_session . config [ 'wiki_page_settings' ] url = url . format ( subreddit = six . text_type ( self . subreddit ) , page = self . page ) return self . reddit_session . request_json ( url , * args , ** kwargs ) [ 'data' ]
def write_length_and_key ( fp , value ) : """Helper to write descriptor key ."""
written = write_fmt ( fp , 'I' , 0 if value in _TERMS else len ( value ) ) written += write_bytes ( fp , value ) return written
def build ( self , builder ) : """Build XML by appending to builder"""
builder . start ( "SourceID" , { } ) builder . data ( self . source_id ) builder . end ( "SourceID" )
def get_compatible_systems ( self , id_or_uri ) : """Retrieves a collection of all storage systems that is applicable to this storage volume template . Args : id _ or _ uri : Can be either the power device id or the uri Returns : list : Storage systems ."""
uri = self . _client . build_uri ( id_or_uri ) + "/compatible-systems" return self . _client . get ( uri )
def israw ( self , ** kwargs ) : """Returns True if the PTY should operate in raw mode . If the container was not started with tty = True , this will return False ."""
if self . raw is None : info = self . _container_info ( ) self . raw = self . stdout . isatty ( ) and info [ 'Config' ] [ 'Tty' ] return self . raw
def generate_shared_public_key ( my_private_key , their_public_pair , generator ) : """Two parties each generate a private key and share their public key with the other party over an insecure channel . The shared public key can be generated by either side , but not by eavesdroppers . You can then use the entrop...
p = generator . Point ( * their_public_pair ) return my_private_key * p
def update ( self , img , value_dict ) : """Accepts an image reference ( object or ID ) and dictionary of key / value pairs , where the key is an attribute of the image , and the value is the desired new value for that image . NOTE : There is a bug in Glance where the ' add ' operation returns a 409 if the ...
img = self . get ( img ) uri = "/%s/%s" % ( self . uri_base , utils . get_id ( img ) ) body = [ ] for key , val in value_dict . items ( ) : op = "replace" if key in img . __dict__ else "add" body . append ( { "op" : op , "path" : "/%s" % key , "value" : val } ) headers = { "Content-Type" : "application/openstac...
def copy_and_patch_libzmq ( ZMQ , libzmq ) : """copy libzmq into source dir , and patch it if necessary . This command is necessary prior to running a bdist on Linux or OS X ."""
if sys . platform . startswith ( 'win' ) : return # copy libzmq into zmq for bdist local = localpath ( 'zmq' , libzmq ) if not ZMQ and not os . path . exists ( local ) : fatal ( "Please specify zmq prefix via `setup.py configure --zmq=/path/to/zmq` " "or copy libzmq into zmq/ manually prior to running bdist." )...
def search ( self ) : """* trigger the conesearch * * * Return : * * - ` ` matchIndies ` ` - - the indicies of the input transient sources ( syncs with ` ` uniqueMatchDicts ` ` ) - ` ` uniqueMatchDicts ` ` - - the crossmatch results * * Usage : * * See class docstring for usage examples . . todo : : -...
self . log . debug ( 'starting the ``search`` method' ) # ACCOUNT FOR TYPE OF SEARCH sqlWhere = False magnitudeLimitFilter = self . magnitudeLimitFilter disCols = [ "zColName" , "distanceColName" , "semiMajorColName" ] sqlWhere = "" if self . physicalSearch == True : for d in disCols : colName = self . colM...
def _staging_step ( self , basename ) : """Checks the size of audio file , splits it if it ' s needed to manage api limit and then moves to ` staged ` directory while appending ` * ` to the end of the filename for self . split _ audio _ by _ duration to replace it by a number . Parameters basename : str ...
name = '' . join ( basename . split ( '.' ) [ : - 1 ] ) if self . get_mode ( ) == "ibm" : # Checks the file size . It ' s better to use 95 % of the allocated # size per file since the upper limit is not always respected . total_size = os . path . getsize ( "{}/filtered/{}.wav" . format ( self . src_dir , name ) ) ...
def default_peek ( python_type , exposes ) : """Autoserializer factory . Works best in Python 3. Arguments : python _ type ( type ) : type constructor . exposes ( iterable ) : sequence of attributes . Returns : callable : deserializer ( ` peek ` routine ) ."""
with_args = False make = python_type try : make ( ) except ( SystemExit , KeyboardInterrupt ) : raise except : make = lambda : python_type . __new__ ( python_type ) try : make ( ) except ( SystemExit , KeyboardInterrupt ) : raise except : make = lambda args : python_type ...
async def parse_get_revoc_reg_delta_response ( get_revoc_reg_delta_response : str ) -> ( str , str , int ) : """Parse a GET _ REVOC _ REG _ DELTA response to get Revocation Registry Delta in the format compatible with Anoncreds API . : param get _ revoc _ reg _ delta _ response : response of GET _ REVOC _ REG _ D...
logger = logging . getLogger ( __name__ ) logger . debug ( "parse_get_revoc_reg_delta_response: >>> get_revoc_reg_delta_response: %r" , get_revoc_reg_delta_response ) if not hasattr ( parse_get_revoc_reg_delta_response , "cb" ) : logger . debug ( "parse_get_revoc_reg_delta_response: Creating callback" ) parse_g...
def count_lines ( fname , mode = 'rU' ) : '''Count the number of lines in a file Only faster way would be to utilize multiple processor cores to perform parallel reads . http : / / stackoverflow . com / q / 845058/623735'''
with open ( fname , mode ) as f : for i , l in enumerate ( f ) : pass return i + 1
def export_assets ( self , parent , output_config , read_time = None , asset_types = None , content_type = None , retry = google . api_core . gapic_v1 . method . DEFAULT , timeout = google . api_core . gapic_v1 . method . DEFAULT , metadata = None , ) : """Exports assets with time and resource types to a given Clou...
# Wrap the transport method to add retry and timeout logic . if "export_assets" not in self . _inner_api_calls : self . _inner_api_calls [ "export_assets" ] = google . api_core . gapic_v1 . method . wrap_method ( self . transport . export_assets , default_retry = self . _method_configs [ "ExportAssets" ] . retry , ...
def create_raid ( self , raid_config ) : """Create the raid configuration on the hardware . : param raid _ config : A dictionary containing target raid configuration data . This data stucture should be as follows : raid _ config = { ' logical _ disks ' : [ { ' raid _ level ' : 1, ' size _ gb ' : 100 , ' phy...
manager . validate ( raid_config ) logical_drives = raid_config [ 'logical_disks' ] redfish_logical_disk = [ ] for ld in logical_drives : ld_attr = { "Raid" : "Raid" + ld [ "raid_level" ] } ld_attr [ "CapacityGiB" ] = - 1 if ld [ "size_gb" ] == "MAX" else int ( ld [ "size_gb" ] ) if 'physical_disks' in ld :...
def match_pattern ( self , pat , word ) : """Implements fixed - width pattern matching . Matches just in case pattern is the same length ( in segments ) as the word and each of the segments in the pattern is a featural subset of the corresponding segment in the word . Matches return the corresponding list o...
segs = self . word_fts ( word ) if len ( pat ) != len ( segs ) : return None else : if all ( [ set ( p ) <= s for ( p , s ) in zip ( pat , segs ) ] ) : return segs
def get_all_fix_names ( fixer_pkg , remove_prefix = True ) : """Return a sorted list of all available fix names in the given package ."""
pkg = __import__ ( fixer_pkg , [ ] , [ ] , [ "*" ] ) fixer_dir = os . path . dirname ( pkg . __file__ ) fix_names = [ ] for name in sorted ( os . listdir ( fixer_dir ) ) : if name . startswith ( "fix_" ) and name . endswith ( ".py" ) : if remove_prefix : name = name [ 4 : ] fix_names . a...
def _shrink ( self , needed , running ) : """Shrink the process pool from the number currently running to the needed number . The processes will be sent a SIGTERM at first and if that doesn ' t clear the process , a SIGKILL . Errors will be logged but otherwise ignored ."""
log = self . _params . get ( 'log' , self . _discard ) log . info ( "%d process%s running, reducing to %d process%s" , running , ses ( running , 'es' ) , needed , ses ( needed , 'es' ) ) now = time . time ( ) signalled = 0 for proc in self . _proc_state [ needed : ] : if proc . pid is None : continue if...
def handle_exception ( error ) : """Simple method for handling exceptions raised by ` PyBankID ` . : param flask _ pybankid . FlaskPyBankIDError error : The exception to handle . : return : The exception represented as a dictionary . : rtype : dict"""
response = jsonify ( error . to_dict ( ) ) response . status_code = error . status_code return response
def unroll_angles ( A , sign ) : """Unrolls the angles , A , so they increase continuously"""
n = np . array ( [ 0 , 0 , 0 ] ) P = np . zeros ( np . shape ( A ) ) P [ 0 ] = A [ 0 ] for i in range ( 1 , len ( A ) ) : n = n + ( ( A [ i ] - A [ i - 1 ] + 0.5 * sign * np . pi ) * sign < 0 ) * np . ones ( 3 ) * 2. * np . pi P [ i ] = A [ i ] + sign * n return P
def get_glitter_app ( self , glitter_app_name ) : """Retrieve the Glitter App config for a specific Glitter App ."""
if not self . discovered : self . discover_glitter_apps ( ) try : glitter_app = self . glitter_apps [ glitter_app_name ] return glitter_app except KeyError : return None
def dice_check ( self , n , d , target , comparator = '<=' ) : """Roll ` ` n ` ` dice with ` ` d ` ` sides , sum them , and return whether they are < = ` ` target ` ` . If ` ` comparator ` ` is provided , use it instead of < = . You may use a string like ' < ' or ' > = ' ."""
from operator import gt , lt , ge , le , eq , ne comps = { '>' : gt , '<' : lt , '>=' : ge , '<=' : le , '=' : eq , '==' : eq , '!=' : ne } try : comparator = comps . get ( comparator , comparator ) except TypeError : pass return comparator ( sum ( self . dice ( n , d ) ) , target )
def render_dictionary ( data , headers = None ) : """Return a dictionary list formatted as a HTML table . Args : data : the dictionary list headers : the keys in the dictionary to use as table columns , in order ."""
return IPython . core . display . HTML ( _html . HtmlBuilder . render_table ( data , headers ) )
def _collect_valid_settings ( meta , clsdict ) : """Return a sequence containing the enumeration values that are valid assignment values . Return - only values are excluded ."""
enum_members = clsdict [ '__members__' ] valid_settings = [ ] for member in enum_members : valid_settings . extend ( member . valid_settings ) clsdict [ '_valid_settings' ] = valid_settings
def solveConsRepAgentMarkov ( solution_next , MrkvArray , DiscFac , CRRA , IncomeDstn , CapShare , DeprFac , PermGroFac , aXtraGrid ) : '''Solve one period of the simple representative agent consumption - saving model . This version supports a discrete Markov process . Parameters solution _ next : ConsumerSol...
# Define basic objects StateCount = MrkvArray . shape [ 0 ] aNrmNow = aXtraGrid aNrmCount = aNrmNow . size EndOfPrdvP_cond = np . zeros ( ( StateCount , aNrmCount ) ) + np . nan # Loop over * next period * states , calculating conditional EndOfPrdvP for j in range ( StateCount ) : # Define next - period - state conditi...
def monitor ( args ) : '''Retrieve status of jobs submitted from a given workspace , as a list of TSV lines sorted by descending order of job submission date'''
r = fapi . list_submissions ( args . project , args . workspace ) fapi . _check_response_code ( r , 200 ) statuses = sorted ( r . json ( ) , key = lambda k : k [ 'submissionDate' ] , reverse = True ) header = '\t' . join ( list ( statuses [ 0 ] . keys ( ) ) ) expander = lambda v : '{0}' . format ( v ) def expander ( th...
def get_times ( self ) : """Return a list of occurrance times of the events : return : list of times"""
if not self . n : return list ( ) ret = list ( ) for item in self . _event_times : ret += list ( self . __dict__ [ item ] ) return ret + list ( matrix ( ret ) - 1e-6 )
def upgrade_tools_all ( call = None ) : '''To upgrade VMware Tools on all virtual machines present in the specified provider . . note : : If the virtual machine is running Windows OS , this function will attempt to suppress the automatic reboot caused by a VMware Tools upgrade . CLI Example : . . code...
if call != 'function' : raise SaltCloudSystemExit ( 'The upgrade_tools_all function must be called with ' '-f or --function.' ) ret = { } vm_properties = [ "name" ] vm_list = salt . utils . vmware . get_mors_with_properties ( _get_si ( ) , vim . VirtualMachine , vm_properties ) for vm in vm_list : ret [ vm [ 'n...
def update_visited ( self ) : """Updates exploration map visited status"""
assert isinstance ( self . player . cshape . center , eu . Vector2 ) pos = self . player . cshape . center # Helper function def set_visited ( layer , cell ) : if cell and not cell . properties . get ( 'visited' ) and cell . tile and cell . tile . id > 0 : cell . properties [ 'visited' ] = True self...
def authorize ( * args , ** kwargs ) : """View for rendering authorization request ."""
if request . method == 'GET' : client = Client . query . filter_by ( client_id = kwargs . get ( 'client_id' ) ) . first ( ) if not client : abort ( 404 ) scopes = current_oauth2server . scopes ctx = dict ( client = client , oauth_request = kwargs . get ( 'request' ) , scopes = [ scopes [ x ] for...
def __get_keys ( self ) : """Return the keys associated with this node by adding its key and then adding parent keys recursively ."""
keys = list ( ) tree_node = self while tree_node is not None and tree_node . key is not None : keys . insert ( 0 , tree_node . key ) tree_node = tree_node . parent return keys
def getKwdArgs ( self , flatten = False ) : """Return a dict of all normal dict parameters - that is , all parameters NOT marked with " pos = N " in the . cfgspc file . This will also exclude all hidden parameters ( metadata , rules , etc ) ."""
# Start with a full deep - copy . What complicates this method is the # idea of sub - sections . This dict can have dicts as values , and so on . dcopy = self . dict ( ) # ConfigObj docs say this is a deep - copy # First go through the dict removing all positional args for idx , scope , name in self . _posArgs : th...
def _handle_order_args ( self , rison_args ) : """Help function to handle rison order arguments : param rison _ args : : return :"""
order_column = rison_args . get ( API_ORDER_COLUMN_RIS_KEY , "" ) order_direction = rison_args . get ( API_ORDER_DIRECTION_RIS_KEY , "" ) if not order_column and self . base_order : order_column , order_direction = self . base_order if order_column not in self . order_columns : return "" , "" return order_colum...
def merge ( self , another ) : """Merges another validation result graph into itself"""
if isinstance ( another , Result ) : another = another . errors self . errors = self . merge_errors ( self . errors , another )
def gauge ( self , name ) : """Returns an existing or creates and returns a new gauge : param name : name of the gauge : return : the gauge object"""
with self . _lock : if name not in self . _gauges : if self . _registry . _ignore_patterns and any ( pattern . match ( name ) for pattern in self . _registry . _ignore_patterns ) : gauge = noop_metric else : gauge = Gauge ( name ) self . _gauges [ name ] = gauge r...