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def _shrink_list ( self , shrink ) : """Shrink list down to essentials : param shrink : List to shrink : type shrink : list : return : Shrunk list : rtype : list"""
res = [ ] if len ( shrink ) == 1 : return self . shrink ( shrink [ 0 ] ) else : for a in shrink : temp = self . shrink ( a ) if temp : res . append ( temp ) return res
def _connected ( self , link_uri ) : """This callback is called form the Crazyflie API when a Crazyflie has been connected and the TOCs have been downloaded ."""
print ( 'Connected to %s' % link_uri ) # The definition of the logconfig can be made before connecting self . _lg_stab = LogConfig ( name = 'Stabilizer' , period_in_ms = 10 ) self . _lg_stab . add_variable ( 'stabilizer.roll' , 'float' ) self . _lg_stab . add_variable ( 'stabilizer.pitch' , 'float' ) self . _lg_stab . ...
def get_order ( self , codes ) : """Return evidence codes in order shown in code2name ."""
return sorted ( codes , key = lambda e : [ self . ev2idx . get ( e ) ] )
def copy_config ( self , original , new ) : '''Copies collection configs into a new folder . Can be used to create new collections based on existing configs . Basically , copies all nodes under / configs / original to / configs / new . : param original str : ZK name of original config : param new str : New na...
if not self . kz . exists ( '/configs/{}' . format ( original ) ) : raise ZookeeperError ( "Collection doesn't exist in Zookeeper. Current Collections are: {}" . format ( self . kz . get_children ( '/configs' ) ) ) base = '/configs/{}' . format ( original ) nbase = '/configs/{}' . format ( new ) self . _copy_dir ( ...
def submit ( self , txn , timeout = None ) : """Submit a transaction . Processes multiple requests in a single transaction . A transaction increments the revision of the key - value store and generates events with the same revision for every completed request . It is not allowed to modify the same key sev...
def run ( pg_txn ) : val = Json ( txn . _marshal ( ) ) pg_txn . execute ( "SELECT pgetcd.submit(%s,%s)" , ( val , 10 ) ) rows = pg_txn . fetchall ( ) res = "{0}" . format ( rows [ 0 ] [ 0 ] ) return res return self . _pool . runInteraction ( run )
def insert_colorpoint ( self , position = 0.5 , color1 = [ 1.0 , 1.0 , 0.0 ] , color2 = [ 1.0 , 1.0 , 0.0 ] ) : """Inserts the specified color into the list ."""
L = self . _colorpoint_list # if position = 0 or 1 , push the end points inward if position <= 0.0 : L . insert ( 0 , [ 0.0 , color1 , color2 ] ) elif position >= 1.0 : L . append ( [ 1.0 , color1 , color2 ] ) # otherwise , find the position where it belongs else : # loop over all the points for n in range ...
def pixels_to_tiles ( self , coords , clamp = True ) : """Convert pixel coordinates into tile coordinates . clamp determines if we should clamp the tiles to ones only on the tilemap ."""
tile_coords = Vector2 ( ) tile_coords . X = int ( coords [ 0 ] ) / self . spritesheet [ 0 ] . width tile_coords . Y = int ( coords [ 1 ] ) / self . spritesheet [ 0 ] . height if clamp : tile_coords . X , tile_coords . Y = self . clamp_within_range ( tile_coords . X , tile_coords . Y ) return tile_coords
def post_data ( self , job_id , body , params = None ) : """` < http : / / www . elastic . co / guide / en / elasticsearch / reference / current / ml - post - data . html > ` _ : arg job _ id : The name of the job receiving the data : arg body : The data to process : arg reset _ end : Optional parameter to sp...
for param in ( job_id , body ) : if param in SKIP_IN_PATH : raise ValueError ( "Empty value passed for a required argument." ) return self . transport . perform_request ( "POST" , _make_path ( "_ml" , "anomaly_detectors" , job_id , "_data" ) , params = params , body = self . _bulk_body ( body ) , )
def move ( self , path , raise_if_exists = False ) : """Alias for ` ` rename ( ) ` `"""
self . rename ( path , raise_if_exists = raise_if_exists )
def aromatize ( molecule , usedPyroles = None ) : """( molecule , usedPyroles = None ) - > aromatize a molecular graph usedPyroles is a dictionary that holds the pyrole like atoms that are used in the conversion process . The following valence checker may need this information"""
pyroleLike = getPyroleLikeAtoms ( molecule ) if usedPyroles is None : usedPyroles = { } cyclesToCheck = [ ] # determine which cycles came in marked as aromatic # and which need to be checked form the kekular form # if a cycle came in as aromatic , convert it # before going on . for cycle in molecule . cycles : ...
def scale ( table ) : """scale table based on the column with the largest sum"""
t = [ ] columns = [ [ ] for i in table [ 0 ] ] for row in table : for i , v in enumerate ( row ) : columns [ i ] . append ( v ) sums = [ float ( sum ( i ) ) for i in columns ] scale_to = float ( max ( sums ) ) scale_factor = [ scale_to / i for i in sums if i != 0 ] for row in table : t . append ( [ a * ...
def cache_file ( source ) : '''Wrapper for cp . cache _ file which raises an error if the file was unable to be cached . CLI Example : . . code - block : : bash salt myminion container _ resource . cache _ file salt : / / foo / bar / baz . txt'''
try : # Don ' t just use cp . cache _ file for this . Docker has its own code to # pull down images from the web . if source . startswith ( 'salt://' ) : cached_source = __salt__ [ 'cp.cache_file' ] ( source ) if not cached_source : raise CommandExecutionError ( 'Unable to cache {0}' . f...
def get_as_datetime ( self , key ) : """Converts map element into a Date or returns the current date if conversion is not possible . : param key : an index of element to get . : return : Date value ot the element or the current date if conversion is not supported ."""
value = self . get ( key ) return DateTimeConverter . to_datetime ( value )
def addJunctionPos ( shape , fromPos , toPos ) : """Extends shape with the given positions in case they differ from the existing endpoints . assumes that shape and positions have the same dimensionality"""
result = list ( shape ) if fromPos != shape [ 0 ] : result = [ fromPos ] + result if toPos != shape [ - 1 ] : result . append ( toPos ) return result
def save_xml ( self , doc , element ) : '''Save this component into an xml . dom . Element object .'''
element . setAttributeNS ( XSI_NS , XSI_NS_S + 'type' , 'rtsExt:component_ext' ) element . setAttributeNS ( RTS_NS , RTS_NS_S + 'id' , self . id ) element . setAttributeNS ( RTS_NS , RTS_NS_S + 'pathUri' , self . path_uri ) if self . active_configuration_set : element . setAttributeNS ( RTS_NS , RTS_NS_S + 'activeC...
def find_line ( scihdu , refhdu ) : """Obtain bin factors and corner location to extract and bin the appropriate subset of a reference image to match a science image . If the science image has zero offset and is the same size and binning as the reference image , ` ` same _ size ` ` will be set to ` True `...
sci_bin , sci_corner = get_corner ( scihdu . header ) ref_bin , ref_corner = get_corner ( refhdu . header ) # We can use the reference image directly , without binning # and without extracting a subset . if ( sci_corner [ 0 ] == ref_corner [ 0 ] and sci_corner [ 1 ] == ref_corner [ 1 ] and sci_bin [ 0 ] == ref_bin [ 0 ...
def show_code ( co , version , file = None ) : """Print details of methods , functions , or code to * file * . If * file * is not provided , the output is printed on stdout ."""
if file is None : print ( code_info ( co , version ) ) else : file . write ( code_info ( co , version ) + '\n' )
def run ( self ) : """Main thread function ."""
if not hasattr ( self , 'queue' ) : raise RuntimeError ( "Audio queue is not intialized." ) chunk = None channel = None self . keep_listening = True while self . keep_listening : if chunk is None : try : frame = self . queue . get ( timeout = queue_timeout ) chunk = pygame . snda...
def _load_plugin_class ( menu , name ) : """Load Custodia plugin Entry points are preferred over dotted import path ."""
group = 'custodia.{}' . format ( menu ) eps = list ( pkg_resources . iter_entry_points ( group , name ) ) if len ( eps ) > 1 : raise ValueError ( "Multiple entry points for {} {}: {}" . format ( menu , name , eps ) ) elif len ( eps ) == 1 : # backwards compatibility with old setuptools ep = eps [ 0 ] if has...
def assert_is_lat ( val ) : """Checks it the given value is a feasible decimal latitude : param val : value to be checked : type val : int of float : returns : ` None ` : raises : * ValueError * if value is out of latitude boundaries , * AssertionError * if type is wrong"""
assert type ( val ) is float or type ( val ) is int , "Value must be a number" if val < - 90.0 or val > 90.0 : raise ValueError ( "Latitude value must be between -90 and 90" )
def set_connection ( self , url ) : """Sets the connection URL to the address a Neo4j server is set up at"""
u = urlparse ( url ) if u . netloc . find ( '@' ) > - 1 and ( u . scheme == 'bolt' or u . scheme == 'bolt+routing' ) : credentials , hostname = u . netloc . rsplit ( '@' , 1 ) username , password , = credentials . split ( ':' ) else : raise ValueError ( "Expecting url format: bolt://user:password@localhost:...
def get_data_for_sensors ( macs = [ ] , search_duratio_sec = 5 , bt_device = '' ) : """Get lates data for sensors in the MAC ' s list . Args : macs ( array ) : MAC addresses search _ duratio _ sec ( int ) : Search duration in seconds . Default 5 bt _ device ( string ) : Bluetooth device id Returns : dic...
log . info ( 'Get latest data for sensors. Stop with Ctrl+C.' ) log . info ( 'Stops automatically in %ss' , search_duratio_sec ) log . info ( 'MACs: %s' , macs ) datas = dict ( ) for new_data in RuuviTagSensor . _get_ruuvitag_datas ( macs , search_duratio_sec , bt_device = bt_device ) : datas [ new_data [ 0 ] ] = n...
async def import_wallet ( config : str , credentials : str , import_config_json : str ) -> None : """Creates a new secure wallet with the given unique name and then imports its content according to fields provided in import _ config This can be seen as an indy _ create _ wallet call with additional content impo...
logger = logging . getLogger ( __name__ ) logger . debug ( "import_wallet: >>> config: %r, credentials: %r, import_config_json: %r" , config , credentials , import_config_json ) if not hasattr ( import_wallet , "cb" ) : logger . debug ( "import_wallet: Creating callback" ) import_wallet . cb = create_cb ( CFUNC...
def PortPathMatcher ( cls , port_path ) : """Returns a device matcher for the given port path ."""
if isinstance ( port_path , str ) : # Convert from sysfs path to port _ path . port_path = [ int ( part ) for part in SYSFS_PORT_SPLIT_RE . split ( port_path ) ] return lambda device : device . port_path == port_path
def apply_calibration ( df , calibration_df , calibration ) : '''Apply calibration values from ` fit _ fb _ calibration ` result to ` calibration ` object .'''
from dmf_control_board_firmware import FeedbackResults for i , ( fb_resistor , R_fb , C_fb ) in calibration_df [ [ 'fb_resistor' , 'R_fb' , 'C_fb' ] ] . iterrows ( ) : calibration . R_fb [ int ( fb_resistor ) ] = R_fb calibration . C_fb [ int ( fb_resistor ) ] = C_fb cleaned_df = df . dropna ( ) grouped = clean...
def index ( self , sub , start = None , end = None ) : """Like S . find ( ) but raise ValueError when the substring is not found . : param str sub : Substring to search . : param int start : Beginning position . : param int end : Stop comparison at this position ."""
return self . value_no_colors . index ( sub , start , end )
def crude_stretch ( self , min_stretch = None , max_stretch = None ) : """Perform simple linear stretching . This is done without any cutoff on the current image and normalizes to the [ 0,1 ] range ."""
if min_stretch is None : non_band_dims = tuple ( x for x in self . data . dims if x != 'bands' ) min_stretch = self . data . min ( dim = non_band_dims ) if max_stretch is None : non_band_dims = tuple ( x for x in self . data . dims if x != 'bands' ) max_stretch = self . data . max ( dim = non_band_dims ...
def GetCoinAssets ( self ) : """Get asset ids of all coins present in the wallet . Returns : list : of UInt256 asset id ' s ."""
assets = set ( ) for coin in self . GetCoins ( ) : assets . add ( coin . Output . AssetId ) return list ( assets )
def datetime2literal_rnc ( d : datetime . datetime , c : Optional [ Dict ] ) -> str : """Format a DateTime object as something MySQL will actually accept ."""
# dt = d . strftime ( " % Y - % m - % d % H : % M : % S " ) # . . . can fail with e . g . # ValueError : year = 1850 is before 1900 ; the datetime strftime ( ) methods # require year > = 1900 # http : / / stackoverflow . com / questions / 10263956 dt = d . isoformat ( " " ) # noinspection PyArgumentList return _mysql ....
def make_auto_deployable ( self , stage , swagger = None ) : """Sets up the resource such that it will triggers a re - deployment when Swagger changes : param swagger : Dictionary containing the Swagger definition of the API"""
if not swagger : return # CloudFormation does NOT redeploy the API unless it has a new deployment resource # that points to latest RestApi resource . Append a hash of Swagger Body location to # redeploy only when the API data changes . First 10 characters of hash is good enough # to prevent redeployment when API ha...
def angle ( self , other ) : """Return the angle to the vector other"""
return math . acos ( self . dot ( other ) / ( self . magnitude ( ) * other . magnitude ( ) ) )
def finalize ( self , album_cache , image_cache , warn_node ) : """Update attributes after Sphinx cache is updated . : param dict album _ cache : Cache of Imgur albums to read . Keys are Imgur IDs , values are Album instances . : param dict image _ cache : Cache of Imgur images to read . Keys are Imgur IDs , va...
album = album_cache [ self . imgur_id ] if self . album else None image = image_cache [ album . cover_id ] if self . album else image_cache [ self . imgur_id ] options = self . options # Determine target . Code in directives . py handles defaults and unsets target _ * if : target : is set . if options [ 'target_gallery...
def import_generated_autoboto_module ( self , name ) : """Imports a module from the generated autoboto package in the build directory ( not target _ dir ) . For example , to import autoboto . services . s3 . shapes , call : botogen . import _ generated _ autoboto _ module ( " services . s3 . shapes " )"""
if str ( self . config . build_dir ) not in sys . path : sys . path . append ( str ( self . config . build_dir ) ) return importlib . import_module ( f"{self.config.target_package}.{name}" )
def _GetStat ( self ) : """Retrieves information about the file entry . Returns : VFSStat : a stat object ."""
stat_object = super ( APFSFileEntry , self ) . _GetStat ( ) # File data stat information . stat_object . size = self . _fsapfs_file_entry . size # Ownership and permissions stat information . stat_object . mode = self . _fsapfs_file_entry . file_mode & 0x0fff stat_object . uid = self . _fsapfs_file_entry . owner_identi...
def setKUS ( self , K , U , S ) : """setKUS ( CLMM self , MatrixXd const & K , MatrixXd const & U , VectorXd const & S ) Parameters K : MatrixXd const & U : MatrixXd const & S : VectorXd const &"""
return _core . CLMM_setKUS ( self , K , U , S )
def get_multiplicon_segments ( self , value ) : """Return a dictionary describing the genome segments that contribute to the named multiplicon , keyed by genome , with ( start feature , end feature ) tuples ."""
sql = '''SELECT genome, first, last FROM segments WHERE multiplicon=:mp''' cur = self . _dbconn . cursor ( ) cur . execute ( sql , { 'mp' : str ( value ) } ) result = cur . fetchall ( ) cur . close ( ) segdict = collections . defaultdict ( tuple ) for genome , start , end in result : segdict [ ge...
def write_recording ( recording , save_path ) : '''Save recording extractor to MEArec format . Parameters recording : RecordingExtractor Recording extractor object to be saved save _ path : str . h5 or . hdf5 path'''
assert HAVE_MREX , "To use the MEArec extractors, install MEArec: \n\n pip install MEArec\n\n" save_path = Path ( save_path ) if save_path . is_dir ( ) : print ( "The file will be saved as recording.h5 in the provided folder" ) save_path = save_path / 'recording.h5' if save_path . suffix == '.h5' or save_path ....
def _safe_issue_checkout ( repo , issue = None ) : """Safely checkout branch for the issue ."""
branch_name = str ( issue ) if issue else 'master' if branch_name not in repo . heads : branch = repo . create_head ( branch_name ) else : branch = repo . heads [ branch_name ] branch . checkout ( )
def _write_conf_file ( ) : """Write configuration file as it is defined in settings ."""
with open ( CONF_FILE , "w" ) as f : f . write ( DEFAULT_PROFTPD_CONF ) logger . debug ( "'%s' created." , CONF_FILE )
def _get_obs_array ( self , k , use_raw = False , layer = 'X' ) : """Get an array from the layer ( default layer = ' X ' ) along the observation dimension by first looking up obs . keys and then var . index ."""
in_raw_var_names = k in self . raw . var_names if self . raw is not None else False if use_raw and self . raw is None : raise ValueError ( '.raw doesn\'t exist' ) if k in self . obs . keys ( ) : x = self . _obs [ k ] elif in_raw_var_names and use_raw and layer == 'X' : x = self . raw [ : , k ] . X elif k in...
def _repr_pretty_ ( self , p , cycle ) : """Derived from IPython ' s dict and sequence pretty printer functions , https : / / github . com / ipython / ipython / blob / master / IPython / lib / pretty . py"""
if cycle : p . text ( '{...}' ) else : keys = self . keys ( ) if keys : delim_start = '[{' delim_end = '}]' wid_max_max = self . _repr_max_width wid_max = max ( [ len ( k ) for k in keys ] ) wid_max = min ( [ wid_max , wid_max_max ] ) key_template = '{{:{:d}s}...
def make ( parser ) : """Prepare a data disk on remote host ."""
sub_command_help = dedent ( """ Create OSDs from a data disk on a remote host: ceph-deploy osd create {node} --data /path/to/device For bluestore, optional devices can be used:: ceph-deploy osd create {node} --data /path/to/data --block-db /path/to/db-device ceph-deploy osd create {no...
def getextensibleindex ( bunchdt , data , commdct , key , objname ) : """get the index of the first extensible item"""
theobject = getobject ( bunchdt , key , objname ) if theobject == None : return None theidd = iddofobject ( data , commdct , key ) extensible_i = [ i for i in range ( len ( theidd ) ) if 'begin-extensible' in theidd [ i ] ] try : extensible_i = extensible_i [ 0 ] except IndexError : return theobject
def _check_disabled ( self ) : """Check if health check is disabled . It logs a message if health check is disabled and it also adds an item to the action queue based on ' on _ disabled ' setting . Returns : True if check is disabled otherwise False ."""
if self . config [ 'check_disabled' ] : if self . config [ 'on_disabled' ] == 'withdraw' : self . log . info ( "Check is disabled and ip_prefix will be " "withdrawn" ) self . log . info ( "adding %s in the queue" , self . ip_with_prefixlen ) self . action . put ( self . del_operation ) ...
def protected_operation ( fn ) : """Use this decorator to prevent an operation from being executed when the related uri resource is still in use . The parent _ object must contain : * a request * with a registry . queryUtility ( IReferencer ) : raises pyramid . httpexceptions . HTTPConflict : Signals that...
@ functools . wraps ( fn ) def advice ( parent_object , * args , ** kw ) : response = _advice ( parent_object . request ) if response is not None : return response else : return fn ( parent_object , * args , ** kw ) return advice
def phoncontent ( self , cls = 'current' , correctionhandling = CorrectionHandling . CURRENT ) : """Get the phonetic content explicitly associated with this element ( of the specified class ) . Unlike : meth : ` phon ` , this method does not recurse into child elements ( with the sole exception of the Correction ...
if not self . SPEAKABLE : # only printable elements can hold text raise NoSuchPhon # Find explicit text content ( same class ) for e in self : if isinstance ( e , PhonContent ) : if cls is None or e . cls == cls : return e elif isinstance ( e , Correction ) : try : re...
def verify_create_instance ( self , ** kwargs ) : """Verifies an instance creation command . Without actually placing an order . See : func : ` create _ instance ` for a list of available options . Example : : new _ vsi = { ' domain ' : u ' test01 . labs . sftlyr . ws ' , ' hostname ' : u ' minion05 ' ,...
kwargs . pop ( 'tags' , None ) create_options = self . _generate_create_dict ( ** kwargs ) return self . guest . generateOrderTemplate ( create_options )
def _set_limit ( self , v , load = False ) : """Setter method for limit , mapped from YANG variable / hardware / profile / tcam / limit ( container ) If this variable is read - only ( config : false ) in the source YANG file , then _ set _ limit is considered as a private method . Backends looking to populate...
if hasattr ( v , "_utype" ) : v = v . _utype ( v ) try : t = YANGDynClass ( v , base = limit . limit , is_container = 'container' , presence = False , yang_name = "limit" , rest_name = "limit" , parent = self , path_helper = self . _path_helper , extmethods = self . _extmethods , register_paths = True , extensi...
def distance_to_contact ( D , alpha = 1 ) : """Compute contact matrix from input distance matrix . Distance values of zeroes are given the largest contact count otherwise inferred non - zero distance values ."""
if callable ( alpha ) : distance_function = alpha else : try : a = np . float64 ( alpha ) def distance_function ( x ) : return 1 / ( x ** ( 1 / a ) ) except TypeError : print ( "Alpha parameter must be callable or an array-like" ) raise except ZeroDivisionErro...
def load ( cls , path ) : """Create a new MLPipeline from a JSON specification . The JSON file format is the same as the one created by the ` to _ dict ` method . Args : path ( str ) : Path of the JSON file to load . Returns : MLPipeline : A new MLPipeline instance with the specification found in the ...
with open ( path , 'r' ) as in_file : metadata = json . load ( in_file ) return cls . from_dict ( metadata )
def get_results ( self , stream , time_interval ) : """Get the results for a given stream : param time _ interval : The time interval : param stream : The stream object : return : A generator over stream instances"""
query = stream . stream_id . as_raw ( ) query [ 'datetime' ] = { '$gt' : time_interval . start , '$lte' : time_interval . end } with switch_db ( StreamInstanceModel , 'hyperstream' ) : for instance in StreamInstanceModel . objects ( __raw__ = query ) : yield StreamInstance ( timestamp = instance . datetime ...
def plot_fit ( self , ** kwargs ) : """Plots the fit of the model against the data"""
import matplotlib . pyplot as plt import seaborn as sns figsize = kwargs . get ( 'figsize' , ( 10 , 7 ) ) plt . figure ( figsize = figsize ) date_index = self . index [ self . ar : self . data . shape [ 0 ] ] mu , Y = self . _model ( self . latent_variables . get_z_values ( ) ) plt . plot ( date_index , Y , label = 'Da...
def plotAccuracy ( suite , name ) : """Plots classification accuracy"""
path = suite . cfgparser . get ( name , "path" ) path = os . path . join ( path , name ) accuracy = defaultdict ( list ) sensations = defaultdict ( list ) for exp in suite . get_exps ( path = path ) : params = suite . get_params ( exp ) maxTouches = params [ "num_sensations" ] cells = params [ "cells_per_ax...
def exclusive ( via = threading . Lock ) : """Mark a callable as exclusive : param via : factory for a Lock to guard the callable Guards the callable against being entered again before completion . Explicitly raises a : py : exc : ` RuntimeError ` on violation . : note : If applied to a method , it is exclu...
def make_exclusive ( fnc ) : fnc_guard = via ( ) @ functools . wraps ( fnc ) def exclusive_call ( * args , ** kwargs ) : if fnc_guard . acquire ( blocking = False ) : try : return fnc ( * args , ** kwargs ) finally : fnc_guard . release ( ) ...
def _SetSshHostKeys ( self , host_key_types = None ) : """Regenerates SSH host keys when the VM is restarted with a new IP address . Booting a VM from an image with a known SSH key allows a number of attacks . This function will regenerating the host key whenever the IP address changes . This applies the firs...
section = 'Instance' instance_id = self . _GetInstanceId ( ) if instance_id != self . instance_config . GetOptionString ( section , 'instance_id' ) : self . logger . info ( 'Generating SSH host keys for instance %s.' , instance_id ) file_regex = re . compile ( r'ssh_host_(?P<type>[a-z0-9]*)_key\Z' ) key_dir...
def ugettext ( self , text ) : """Translates message / text and returns it in a unicode string . Using runtime to get i18n service ."""
runtime_service = self . runtime . service ( self , "i18n" ) runtime_ugettext = runtime_service . ugettext return runtime_ugettext ( text )
def _extract_jar ( self , coordinate , jar_path ) : """Extracts the jar to a subfolder of workdir / extracted and returns the path to it ."""
with open ( jar_path , 'rb' ) as f : sha = sha1 ( f . read ( ) ) . hexdigest ( ) outdir = os . path . join ( self . workdir , 'extracted' , sha ) if not os . path . exists ( outdir ) : ZIP . extract ( jar_path , outdir ) self . context . log . debug ( 'Extracting jar {jar} at {jar_path}.' . format ( jar...
def requires_product_environment ( func , * args , ** kws ) : """task decorator that makes sure that the product environment of django _ productline is activated : - context is bound - features have been composed"""
from django_productline import startup startup . select_product ( ) return func ( * args , ** kws )
def poll_for_response ( self ) : """Polls the device for user input If there is a keymapping for the device , the key map is applied to the key reported from the device . If a response is waiting to be processed , the response is appended to the internal response _ queue"""
key_state = self . con . check_for_keypress ( ) if key_state != NO_KEY_DETECTED : response = self . con . get_current_response ( ) if self . keymap is not None : response [ 'key' ] = self . keymap [ response [ 'key' ] ] else : response [ 'key' ] -= 1 self . response_queue . append ( resp...
def _apply ( self , plan ) : '''Required function of manager . py to actually apply a record change . : param plan : Contains the zones and changes to be made : type plan : octodns . provider . base . Plan : type return : void'''
desired = plan . desired changes = plan . changes self . log . debug ( '_apply: zone=%s, len(changes)=%d' , desired . name , len ( changes ) ) azure_zone_name = desired . name [ : len ( desired . name ) - 1 ] self . _check_zone ( azure_zone_name , create = True ) for change in changes : class_name = change . __clas...
def parent_folder ( path , base = None ) : """: param str | None path : Path to file or folder : param str | None base : Base folder to use for relative paths ( default : current working dir ) : return str : Absolute path of parent folder of ' path '"""
return path and os . path . dirname ( resolved_path ( path , base = base ) )
def _handle_func_def ( self , node , scope , ctxt , stream ) : """Handle FuncDef nodes : node : TODO : scope : TODO : ctxt : TODO : stream : TODO : returns : TODO"""
self . _dlog ( "handling function definition" ) func = self . _handle_node ( node . decl , scope , ctxt , stream ) func . body = node . body
def remove_profile ( self , profile ) : """Remove a profile . : param profile : The profile to be removed . : type profile : basestring , str"""
self . remove_file ( os . path . join ( self . root_directory , 'minimum_needs' , profile + '.json' ) )
def _check_max_running ( self , func , data , opts , now ) : '''Return the schedule data structure'''
# Check to see if there are other jobs with this # signature running . If there are more than maxrunning # jobs present then don ' t start another . # If jid _ include is False for this job we can ignore all this # NOTE - - jid _ include defaults to True , thus if it is missing from the data # dict we treat it like it ...
def setMaxSpeed ( self , laneID , speed ) : """setMaxSpeed ( string , double ) - > None Sets a new maximum allowed speed on the lane in m / s ."""
self . _connection . _sendDoubleCmd ( tc . CMD_SET_LANE_VARIABLE , tc . VAR_MAXSPEED , laneID , speed )
def sign ( self , consumer_secret , access_token_secret , method , url , oauth_params , req_kwargs ) : '''Sign request using PLAINTEXT method . : param consumer _ secret : Consumer secret . : type consumer _ secret : str : param access _ token _ secret : Access token secret ( optional ) . : type access _ to...
key = self . _escape ( consumer_secret ) + b'&' if access_token_secret : key += self . _escape ( access_token_secret ) return key . decode ( )
def _instantiate ( cls , params ) : """Helper to instantiate Attention classes from parameters . Warns in log if parameter is not supported by class constructor . : param cls : Attention class . : param params : configuration parameters . : return : instance of ` cls ` type ."""
sig_params = inspect . signature ( cls . __init__ ) . parameters valid_params = dict ( ) for key , value in params . items ( ) : if key in sig_params : valid_params [ key ] = value else : logger . debug ( 'Type %s does not support parameter \'%s\'' % ( cls . __name__ , key ) ) return cls ( ** va...
def get_embedded_items ( result_collection ) : """Given a result _ collection ( returned by a previous API call that returns a collection , like get _ bundle _ list ( ) or search ( ) ) , return a list of embedded items with each item in the returned list considered a result object . ' result _ collection ' ...
# Argument error checking . assert result_collection is not None result = [ ] embedded_objects = result_collection . get ( '_embedded' ) if embedded_objects is not None : # Handle being passed a non - collection gracefully . result = embedded_objects . get ( 'items' , result ) return result
def formatmonthname ( self , theyear , themonth , withyear = True ) : """Return a month name translated as a table row ."""
monthname = '%s %s' % ( MONTHS [ themonth ] . title ( ) , theyear ) return '<caption>%s</caption>' % monthname
def _get_all_eip_addresses ( addresses = None , allocation_ids = None , region = None , key = None , keyid = None , profile = None ) : '''Get all EIP ' s associated with the current credentials . addresses ( list ) - Optional list of addresses . If provided , only those those in the list will be returned . ...
conn = _get_conn ( region = region , key = key , keyid = keyid , profile = profile ) try : return conn . get_all_addresses ( addresses = addresses , allocation_ids = allocation_ids ) except boto . exception . BotoServerError as e : log . error ( e ) return [ ]
def to_list ( self , n = None ) : """Converts sequence to list of elements . > > > type ( seq ( [ ] ) . to _ list ( ) ) list > > > type ( seq ( [ ] ) ) functional . pipeline . Sequence > > > seq ( [ 1 , 2 , 3 ] ) . to _ list ( ) [1 , 2 , 3] : param n : Take n elements of sequence if not None : retur...
if n is None : self . cache ( ) return self . _base_sequence else : return self . cache ( ) . take ( n ) . list ( )
def begin ( self ) : """Called once before using the session to check global step ."""
self . _global_step_tensor = tf . train . get_global_step ( ) if self . _global_step_tensor is None : raise RuntimeError ( 'Global step should be created to use StepCounterHook.' )
def _patch_for_tf1_12 ( tf ) : """Monkey patch tf 1.12 so tfds can use it ."""
tf . io . gfile = tf . gfile tf . io . gfile . copy = tf . gfile . Copy tf . io . gfile . exists = tf . gfile . Exists tf . io . gfile . glob = tf . gfile . Glob tf . io . gfile . isdir = tf . gfile . IsDirectory tf . io . gfile . listdir = tf . gfile . ListDirectory tf . io . gfile . makedirs = tf . gfile . MakeDirs t...
def simxGetCollectionHandle ( clientID , collectionName , operationMode ) : '''Please have a look at the function description / documentation in the V - REP user manual'''
handle = ct . c_int ( ) if ( sys . version_info [ 0 ] == 3 ) and ( type ( collectionName ) is str ) : collectionName = collectionName . encode ( 'utf-8' ) return c_GetCollectionHandle ( clientID , collectionName , ct . byref ( handle ) , operationMode ) , handle . value
def OpenDialog ( self , Name , * Params ) : """Open dialog . Use this method to open dialogs added in newer Skype versions if there is no dedicated method in Skype4Py . : Parameters : Name : str Dialog name . Params : unicode One or more optional parameters ."""
self . _Skype . _Api . allow_focus ( self . _Skype . Timeout ) params = filter ( None , ( str ( Name ) , ) + Params ) self . _Skype . _DoCommand ( 'OPEN %s' % tounicode ( ' ' . join ( params ) ) )
def find_matching_middleware ( self , method , path ) : """Iterator handling the matching of middleware against a method + path pair . Yields the middleware , and the"""
for mw in self . mw_list : if not mw . matches_method ( method ) : continue # get the path matching this middleware and the ' rest ' of the url # ( i . e . the part that comes AFTER the match ) to be potentially # matched later by a subchain path_match , rest_url = mw . path_split ( path ) ...
def _adaptSynapses ( self , inputVector , activeColumns , predictedActiveCells ) : """This is the primary learning method . It updates synapses ' permanence based on the bottom - up input to the TP and the TP ' s active cells . For each active cell , its synapses ' permanences are updated as follows : 1 . if ...
inputIndices = numpy . where ( inputVector > 0 ) [ 0 ] predictedIndices = numpy . where ( predictedActiveCells > 0 ) [ 0 ] permChanges = numpy . zeros ( self . _numInputs ) # Decrement inactive TM cell - > active TP cell connections permChanges . fill ( - 1 * self . _synPermInactiveDec ) # Increment active TM cell - > ...
def create_adv_by_name ( model , x , attack_type , sess , dataset , y = None , ** kwargs ) : """Creates the symbolic graph of an adversarial example given the name of an attack . Simplifies creating the symbolic graph of an attack by defining dataset - specific parameters . Dataset - specific default paramete...
# TODO : black box attacks attack_names = { 'FGSM' : FastGradientMethod , 'MadryEtAl' : MadryEtAl , 'MadryEtAl_y' : MadryEtAl , 'MadryEtAl_multigpu' : MadryEtAlMultiGPU , 'MadryEtAl_y_multigpu' : MadryEtAlMultiGPU } if attack_type not in attack_names : raise Exception ( 'Attack %s not defined.' % attack_type ) atta...
def solution_path ( self , min_lambda , max_lambda , lambda_bins , verbose = 0 ) : '''Follows the solution path to find the best lambda value .'''
lambda_grid = np . exp ( np . linspace ( np . log ( max_lambda ) , np . log ( min_lambda ) , lambda_bins ) ) aic_trace = np . zeros ( lambda_grid . shape ) # The AIC score for each lambda value aicc_trace = np . zeros ( lambda_grid . shape ) # The AICc score for each lambda value ( correcting for finite sample size ) b...
def logical_or ( self , other ) : """logical _ or ( t ) = self ( t ) or other ( t ) ."""
return self . operation ( other , lambda x , y : int ( x or y ) )
def add_context ( request ) : """Add variables to all dictionaries passed to templates ."""
# Whether the user has president privileges try : PRESIDENT = Manager . objects . filter ( incumbent__user = request . user , president = True , ) . count ( ) > 0 except TypeError : PRESIDENT = False # If the user is logged in as an anymous user if request . user . username == ANONYMOUS_USERNAME : request ....
def vertices_per_edge ( self ) : """Returns an Ex2 array of adjacencies between vertices , where each element in the array is a vertex index . Each edge is included only once . Edges that are not shared by 2 faces are not included ."""
import numpy as np return np . asarray ( [ vertices_in_common ( e [ 0 ] , e [ 1 ] ) for e in self . f [ self . faces_per_edge ] ] )
def days_since_last_snowfall ( self , value = 99 ) : """Corresponds to IDD Field ` days _ since _ last _ snowfall ` Args : value ( int ) : value for IDD Field ` days _ since _ last _ snowfall ` Missing value : 99 if ` value ` is None it will not be checked against the specification and is assumed to be a ...
if value is not None : try : value = int ( value ) except ValueError : raise ValueError ( 'value {} need to be of type int ' 'for field `days_since_last_snowfall`' . format ( value ) ) self . _days_since_last_snowfall = value
def dict_minus ( d , * keys ) : """Delete key ( s ) from dict if exists , returning resulting dict"""
# make shallow copy d = dict ( d ) for key in keys : try : del d [ key ] except : pass return d
def writeIslandBoxes ( filename , catalog , fmt ) : """Write an output file in ds9 . reg , or kvis . ann format that contains bounding boxes for all the islands . Parameters filename : str Filename to write . catalog : list List of sources . Only those of type : class : ` AegeanTools . models . IslandSour...
if fmt not in [ 'reg' , 'ann' ] : log . warning ( "Format not supported for island boxes{0}" . format ( fmt ) ) return # fmt not supported out = open ( filename , 'w' ) print ( "#Aegean Islands" , file = out ) print ( "#Aegean version {0}-({1})" . format ( __version__ , __date__ ) , file = out ) if fmt == 'reg'...
def _simulated_chain_result ( self , potential_chain , already_used_bonus ) : """Simulate any chain reactions . Arguments : potential _ chain : a state to be tested for chain reactions already _ used _ bonus : boolean indicating whether a bonus turn was already applied during this action Return : final re...
while potential_chain : # hook for capture game optimizations . no effect in base # warning : only do this ONCE for any given state or it will # always filter the second time if self . _disallow_state ( potential_chain ) : potential_chain . graft_child ( Filtered ( ) ) return None # no more ...
def sort_canonical ( keyword , stmts ) : """Sort all ` stmts ` in the canonical order defined by ` keyword ` . Return the sorted list . The ` stmt ` list is not modified . If ` keyword ` does not have a canonical order , the list is returned as is ."""
try : ( _arg_type , subspec ) = stmt_map [ keyword ] except KeyError : return stmts res = [ ] # keep the order of data definition statements and case keep = [ s [ 0 ] for s in data_def_stmts ] + [ 'case' ] for ( kw , _spec ) in flatten_spec ( subspec ) : # keep comments before a statement together with that sta...
def _normalize_slice ( self , key , clamp = False ) : """Return a slice equivalent to the input * key * , standardized ."""
if key . start is None : start = 0 else : start = ( len ( self ) + key . start ) if key . start < 0 else key . start if key . stop is None or key . stop == maxsize : stop = len ( self ) if clamp else None else : stop = ( len ( self ) + key . stop ) if key . stop < 0 else key . stop return slice ( start ...
def get_config ( ) : """Read the configfile and return config dict . Returns dict Dictionary with the content of the configpath file ."""
configpath = get_configpath ( ) if not configpath . exists ( ) : raise IOError ( "Config file {} not found." . format ( str ( configpath ) ) ) else : config = configparser . ConfigParser ( ) config . read ( str ( configpath ) ) return config
def p_word_list ( p ) : '''word _ list : WORD | word _ list WORD'''
parserobj = p . context if len ( p ) == 2 : p [ 0 ] = [ _expandword ( parserobj , p . slice [ 1 ] ) ] else : p [ 0 ] = p [ 1 ] p [ 0 ] . append ( _expandword ( parserobj , p . slice [ 2 ] ) )
def auto ( self , enabled = True , ** kwargs ) : """Method to enable or disable automatic capture , allowing you to simultaneously set the instance parameters ."""
self . namespace = self . get_namespace ( ) self . notebook_name = "{notebook}" self . _timestamp = tuple ( time . localtime ( ) ) kernel = r'var kernel = IPython.notebook.kernel; ' nbname = r"var nbname = IPython.notebook.get_notebook_name(); " nbcmd = ( r"var name_cmd = '%s.notebook_name = \"' + nbname + '\"'; " % se...
def eta_mass1_to_mass2 ( eta , mass1 , return_mass_heavier = False , force_real = True ) : """This function takes values for eta and one component mass and returns the second component mass . Similar to mchirp _ mass1 _ to _ mass2 this requires finding the roots of a quadratic equation . Basically : eta m2 ^ ...
return conversions . mass_from_knownmass_eta ( mass1 , eta , known_is_secondary = return_mass_heavier , force_real = force_real )
def transform ( self , X ) : """Add the features calculated using the timeseries _ container and add them to the corresponding rows in the input pandas . DataFrame X . To save some computing time , you should only include those time serieses in the container , that you need . You can set the timeseries contai...
if self . timeseries_container is None : raise RuntimeError ( "You have to provide a time series using the set_timeseries_container function before." ) # Extract only features for the IDs in X . index timeseries_container_X = restrict_input_to_index ( self . timeseries_container , self . column_id , X . index ) ext...
def _encode_char ( char , charmap , defaultchar ) : """Encode a single character with the given encoding map : param char : char to encode : param charmap : dictionary for mapping characters in this code page"""
if ord ( char ) < 128 : return ord ( char ) if char in charmap : return charmap [ char ] return ord ( defaultchar )
def cv_precompute ( self , mask , b ) : '''Pre - compute the matrices : py : obj : ` A ` and : py : obj : ` B ` ( cross - validation step only ) for chunk : py : obj : ` b ` .'''
# Get current chunk and mask outliers m1 = self . get_masked_chunk ( b ) flux = self . fraw [ m1 ] K = GetCovariance ( self . kernel , self . kernel_params , self . time [ m1 ] , self . fraw_err [ m1 ] ) med = np . nanmedian ( flux ) # Now mask the validation set M = lambda x , axis = 0 : np . delete ( x , mask , axis ...
def remove_from_products ( self , products = None , all_products = False ) : """Remove user group from some product license configuration groups ( PLCs ) , or all of them . : param products : list of product names the user group should be removed from : param all _ products : a boolean meaning remove from all (...
if all_products : if products : raise ArgumentError ( "When removing from all products, do not specify specific products" ) plist = "all" else : if not products : raise ArgumentError ( "You must specify products from which to remove the user group" ) plist = { GroupTypes . productConfigu...
def mysql_to_dict ( data , key ) : '''Convert MySQL - style output to a python dictionary'''
ret = { } headers = [ '' ] for line in data : if not line : continue if line . startswith ( '+' ) : continue comps = line . split ( '|' ) for comp in range ( len ( comps ) ) : comps [ comp ] = comps [ comp ] . strip ( ) if len ( headers ) > 1 : index = len ( headers )...
def simple_cmd ( ) : """` ` Deprecated ` ` : Not better than ` ` fire ` ` - > pip install fire"""
parser = argparse . ArgumentParser ( prog = "Simple command-line function toolkit." , description = """Input function name and args and kwargs. python xxx.py main -a 1 2 3 -k a=1,b=2,c=3""" , ) parser . add_argument ( "-f" , "--func_name" , default = "main" ) parser . add_argument ( "-a" , "--args" , dest = "ar...
def update_subscription ( request , ident ) : "Shows subscriptions options for a verified subscriber ."
try : subscription = Subscription . objects . get ( ident = ident ) except Subscription . DoesNotExist : return respond ( 'overseer/invalid_subscription_token.html' , { } , request ) if request . POST : form = UpdateSubscriptionForm ( request . POST , instance = subscription ) if form . is_valid ( ) : ...
def _dump_model ( model , attrs = None ) : """Dump the model fields for debugging ."""
fields = [ ] for field in model . _meta . fields : fields . append ( ( field . name , str ( getattr ( model , field . name ) ) ) ) if attrs is not None : for attr in attrs : fields . append ( ( attr , str ( getattr ( model , attr ) ) ) ) for field in model . _meta . many_to_many : vals = getattr ( m...