signature
stringlengths
29
44.1k
implementation
stringlengths
0
85.2k
def _add_reference ( self , obj , ident = 0 ) : """Adds a read reference to the marshaler storage : param obj : Reference to add : param ident : Log indentation level"""
log_debug ( "## New reference handle 0x{0:X}: {1} -> {2}" . format ( len ( self . references ) + self . BASE_REFERENCE_IDX , type ( obj ) . __name__ , repr ( obj ) , ) , ident , ) self . references . append ( obj )
def get_activity_lookup_session ( self , proxy ) : """Gets the ` ` OsidSession ` ` associated with the activity lookup service . arg : proxy ( osid . proxy . Proxy ) : a proxy return : ( osid . learning . ActivityLookupSession ) - an ` ` ActivityLookupSession ` ` raise : NullArgument - ` ` proxy ` ` is ` ` ...
if not self . supports_activity_lookup ( ) : raise errors . Unimplemented ( ) # pylint : disable = no - member return sessions . ActivityLookupSession ( proxy = proxy , runtime = self . _runtime )
def _evaluate ( self , * args , ** kwargs ) : """NAME : _ _ call _ _ ( _ evaluate ) PURPOSE : evaluate the actions ( jr , lz , jz ) INPUT : Either : a ) R , vR , vT , z , vz [ , phi ] : 1 ) floats : phase - space value for single object ( phi is optional ) ( each can be a Quantity ) 2 ) numpy . ndar...
delta = kwargs . pop ( 'delta' , self . _delta ) order = kwargs . get ( 'order' , self . _order ) if ( ( self . _c and not ( 'c' in kwargs and not kwargs [ 'c' ] ) ) or ( ext_loaded and ( ( 'c' in kwargs and kwargs [ 'c' ] ) ) ) ) and _check_c ( self . _pot ) : if len ( args ) == 5 : # R , vR . vT , z , vz ...
def _pick_level ( cls , btc_amount ) : """Choose between small , medium , large , . . . depending on the amount specified ."""
for size , level in cls . TICKER_LEVEL : if btc_amount < size : return level return cls . TICKER_LEVEL [ - 1 ] [ 1 ]
def mktk03 ( terms , seed , G2 , G3 ) : """generates a list of gauss coefficients drawn from the TK03 distribution"""
# random . seed ( n ) p = 0 n = seed gh = [ ] g10 , sfact , afact = - 18e3 , 3.8 , 2.4 g20 = G2 * g10 g30 = G3 * g10 alpha = g10 / afact s1 = s_l ( 1 , alpha ) s10 = sfact * s1 gnew = random . normal ( g10 , s10 ) if p == 1 : print ( 1 , 0 , gnew , 0 ) gh . append ( gnew ) gh . append ( random . normal ( 0 , s1 ) )...
def wait ( self , timeout = None ) : """An implementation of the wait method which doesn ' t involve polling but instead utilizes a " real " synchronization scheme ."""
import threading if self . _state != self . PENDING : return e = threading . Event ( ) self . addCallback ( lambda v : e . set ( ) ) self . addErrback ( lambda r : e . set ( ) ) e . wait ( timeout )
def _run_python ( work_bam_a , work_bam_b , out_dir , aligner , prefix , items ) : """Run python version of disambiguation"""
Args = collections . namedtuple ( "Args" , "A B output_dir intermediate_dir " "no_sort prefix aligner" ) args = Args ( work_bam_a , work_bam_b , out_dir , out_dir , True , "" , aligner ) disambiguate_main ( args )
def loadScopeGroupbyName ( self , name , service_group_id , callback = None , errback = None ) : """Load an existing Scope Group by name and service group id into a high level Scope Group object : param str name : Name of an existing Scope Group : param int service _ group _ id : id of the service group the Sco...
import ns1 . ipam scope_group = ns1 . ipam . Scopegroup ( self . config , name = name , service_group_id = service_group_id ) return scope_group . load ( callback = callback , errback = errback )
def _params_extend ( params , _ignore_name = False , ** kwargs ) : '''Extends the params dictionary by values from keyword arguments . . . versionadded : : 2016.3.0 : param params : Dictionary with parameters for zabbix API . : param _ ignore _ name : Salt State module is passing first line as ' name ' parame...
# extend params value by optional zabbix API parameters for key in kwargs : if not key . startswith ( '_' ) : params . setdefault ( key , kwargs [ key ] ) # ignore name parameter passed from Salt state module , use firstname or visible _ name instead if _ignore_name : params . pop ( 'name' , None ) ...
def alocar ( self , nome , id_tipo_rede , id_ambiente , descricao , id_ambiente_vip = None , vrf = None ) : """Inserts a new VLAN . : param nome : Name of Vlan . String with a maximum of 50 characters . : param id _ tipo _ rede : Identifier of the Network Type . Integer value and greater than zero . : param i...
vlan_map = dict ( ) vlan_map [ 'nome' ] = nome vlan_map [ 'id_tipo_rede' ] = id_tipo_rede vlan_map [ 'id_ambiente' ] = id_ambiente vlan_map [ 'descricao' ] = descricao vlan_map [ 'id_ambiente_vip' ] = id_ambiente_vip vlan_map [ 'vrf' ] = vrf code , xml = self . submit ( { 'vlan' : vlan_map } , 'POST' , 'vlan/' ) return...
def update ( self , title , key ) : """Update this key . : param str title : ( required ) , title of the key : param str key : ( required ) , text of the key file : returns : bool"""
json = None if title and key : data = { 'title' : title , 'key' : key } json = self . _json ( self . _patch ( self . _api , data = dumps ( data ) ) , 200 ) if json : self . _update_ ( json ) return True return False
def Vdiff ( D1 , D2 ) : """finds the vector difference between two directions D1 , D2"""
A = dir2cart ( [ D1 [ 0 ] , D1 [ 1 ] , 1. ] ) B = dir2cart ( [ D2 [ 0 ] , D2 [ 1 ] , 1. ] ) C = [ ] for i in range ( 3 ) : C . append ( A [ i ] - B [ i ] ) return cart2dir ( C )
def copy ( self ) : """Deeply copies everything in the query object except the connection object is shared"""
connection = self . connection del self . connection copied_query = deepcopy ( self ) copied_query . connection = connection self . connection = connection return copied_query
def to_pb ( self ) : """Converts the column family to a protobuf . : rtype : : class : ` . table _ v2 _ pb2 . ColumnFamily ` : returns : The converted current object ."""
if self . gc_rule is None : return table_v2_pb2 . ColumnFamily ( ) else : return table_v2_pb2 . ColumnFamily ( gc_rule = self . gc_rule . to_pb ( ) )
def get_possible_importers ( file_uris , current_doc = None ) : """Return all the importer objects that can handle the specified files . Possible imports may vary depending on the currently active document"""
importers = [ ] for importer in IMPORTERS : if importer . can_import ( file_uris , current_doc ) : importers . append ( importer ) return importers
def run_with_reloader ( main_func , extra_files = None , interval = 1 ) : """Run the given function in an independent python interpreter ."""
import signal signal . signal ( signal . SIGTERM , lambda * args : sys . exit ( 0 ) ) if os . environ . get ( 'WERKZEUG_RUN_MAIN' ) == 'true' : thread . start_new_thread ( main_func , ( ) ) try : reloader_loop ( extra_files , interval ) except KeyboardInterrupt : return try : sys . exit ...
def to_latlon ( array , domain , axis = 'lon' ) : """Broadcasts a 1D axis dependent array across another axis . : param array input _ array : the 1D array used for broadcasting : param domain : the domain associated with that array : param axis : the axis that the input array will be broadcasted across ...
# if array is latitude dependent ( has the same shape as lat ) axis , array , depth = np . meshgrid ( domain . axes [ axis ] . points , array , domain . axes [ 'depth' ] . points ) if axis == 'lat' : # if array is longitude dependent ( has the same shape as lon ) np . swapaxes ( array , 1 , 0 ) return Field ( array...
def _map_agent_mod ( self , agent , mod_condition ) : """Map a single modification condition on an agent . Parameters agent : : py : class : ` indra . statements . Agent ` Agent to check for invalid modification sites . mod _ condition : : py : class : ` indra . statements . ModCondition ` Modification to...
# Get the UniProt ID of the agent , if not found , return up_id = _get_uniprot_id ( agent ) if not up_id : logger . debug ( "No uniprot ID for %s" % agent . name ) return None # If no site information for this residue , skip if mod_condition . position is None or mod_condition . residue is None : return Non...
def duplicate_items ( * collections ) : """Search for duplicate items in all collections . Examples > > > duplicate _ items ( [ 1 , 2 ] , [ 3 ] ) set ( ) > > > duplicate _ items ( { 1 : ' a ' , 2 : ' a ' } ) set ( ) > > > duplicate _ items ( [ ' a ' , ' b ' , ' a ' ] ) > > > duplicate _ items ( [ 1 , ...
duplicates = set ( ) seen = set ( ) for item in flatten ( collections ) : if item in seen : duplicates . add ( item ) else : seen . add ( item ) return duplicates
def ParseDestList ( self , parser_mediator , olecf_item ) : """Parses the DestList OLECF item . Args : parser _ mediator ( ParserMediator ) : mediates interactions between parsers and other components , such as storage and dfvfs . olecf _ item ( pyolecf . item ) : OLECF item . Raises : UnableToParseFile...
header_map = self . _GetDataTypeMap ( 'dest_list_header' ) try : header , entry_offset = self . _ReadStructureFromFileObject ( olecf_item , 0 , header_map ) except ( ValueError , errors . ParseError ) as exception : raise errors . UnableToParseFile ( 'Unable to parse DestList header with error: {0!s}' . format ...
def start ( self ) : """Confirm that we may access the target cluster ."""
version = yield self . request ( "get" , "/version" ) if version != 2 : raise GanetiApiError ( "Can't work with Ganeti RAPI version %d" % version ) log . msg ( "Accessing Ganeti RAPI, version %d" % version , system = "Gentleman" ) self . version = version try : features = yield self . request ( "get" , "/2/feat...
def display ( self , ret , indent , prefix , out ) : '''Recursively iterate down through data structures to determine output'''
if isinstance ( ret , six . string_types ) : lines = ret . split ( '\n' ) for line in lines : out += '{0}{1}{2}{3}{4}\n' . format ( self . colors [ 'RED' ] , ' ' * indent , prefix , line , self . colors [ 'ENDC' ] ) elif isinstance ( ret , dict ) : for key in sorted ( ret ) : val = ret [ key...
def set_review_solution ( self , during_attempt = None , after_attempt = None , before_deadline = None , after_deadline = None ) : """stub"""
solution = self . my_osid_object_form . _my_map [ 'reviewOptions' ] [ 'solution' ] if during_attempt is not None : solution [ 'duringAttempt' ] = bool ( during_attempt ) if after_attempt is not None : solution [ 'afterAttempt' ] = bool ( after_attempt ) if before_deadline is not None : solution [ 'beforeDea...
def cipher_block ( self , state ) : """Perform AES block cipher on input"""
# PKCS7 Padding state = state + [ 16 - len ( state ) ] * ( 16 - len ( state ) ) # Fails test if it changes the input with + = self . _add_round_key ( state , 0 ) for i in range ( 1 , self . _Nr ) : self . _sub_bytes ( state ) self . _shift_rows ( state ) self . _mix_columns ( state , False ) self . _add...
def _gegetate_args ( self , options ) : """Generator of args parts based on options specification ."""
for optkey , optval in self . _normalize_options ( options ) : yield optkey if isinstance ( optval , ( list , tuple ) ) : assert len ( optval ) == 2 and optval [ 0 ] and optval [ 1 ] , 'Option value can only be either a string or a (tuple, list) of 2 items' yield optval [ 0 ] yield optva...
def update ( self , ** kwargs ) : """Fetch all changes for this remote , including new branches which will be forced in ( in case your local remote branch is not part the new remote branches ancestry anymore ) . : param kwargs : Additional arguments passed to git - remote update : return : self"""
scmd = 'update' kwargs [ 'insert_kwargs_after' ] = scmd self . repo . git . remote ( scmd , self . name , ** kwargs ) return self
def _cursor_down ( self , count = 1 ) : """Moves cursor down count lines in same column . Cursor stops at bottom margin ."""
self . y = min ( self . size [ 0 ] - 1 , self . y + count )
def save ( self , data , * args , ** kwargs ) : """inserts data ( dict or list of dicts ) expected kwargs : collection _ name : by default uses MONGODB _ DEFAULT _ COLLECTION w : by default set to 0 to disable write acknowledgement assumes that data has been verified / validated"""
try : collection_name = kwargs . get ( 'collection_name' , MONGODB_DEFAULT_COLLECTION ) w = kwargs . get ( 'w' , 0 ) if not self . collection : self . set_collection ( collection_name ) self . collection . insert ( data , w ) except ( ConnectionFailure , AutoReconnect , InvalidURI ) , e : # fail...
def _base_signup_form_class ( ) : """Currently , we inherit from the custom form , if any . This is all not very elegant , though it serves a purpose : - There are two signup forms : one for local accounts , and one for social accounts - Both share a common base ( BaseSignupForm ) - Given the above , how ...
if not app_settings . SIGNUP_FORM_CLASS : return _DummyCustomSignupForm try : fc_module , fc_classname = app_settings . SIGNUP_FORM_CLASS . rsplit ( '.' , 1 ) except ValueError : raise exceptions . ImproperlyConfigured ( '%s does not point to a form' ' class' % app_settings . SIGNUP_FORM_CLASS ) try : m...
def publish ( self , topic , options = None , args = None , kwargs = None ) : """Publishes a messages to the server"""
topic = self . get_full_uri ( topic ) if options is None : options = { 'acknowledge' : True } if options . get ( 'acknowledge' ) : request = PUBLISH ( options = options or { } , topic = topic , args = args or [ ] , kwargs = kwargs or { } ) result = self . send_and_await_response ( request ) return resul...
def assign ( self , role ) : '''Assign : class : ` Role ` ` ` role ` ` to this : class : ` Subject ` . If this : class : ` Subject ` is the : attr : ` Role . owner ` , this method does nothing .'''
if role . owner_id != self . id : return self . roles . add ( role )
def wrap ( self , text ) : '''Wraps the text object to width , breaking at whitespaces . Runs of whitespace characters are preserved , provided they do not fall at a line boundary . The implementation is based on that of textwrap from the standard library , but we can cope with StringWithFormatting objects . ...
result = [ ] chunks = self . _chunk ( text ) while chunks : self . _lstrip ( chunks ) current_line = [ ] current_line_length = 0 current_chunk_length = 0 while chunks : current_chunk_length = len ( chunks [ 0 ] ) if current_line_length + current_chunk_length <= self . width : ...
def key_from_keybase ( username , fingerprint = None ) : """Look up a public key from a username"""
url = keybase_lookup_url ( username ) resp = requests . get ( url ) if resp . status_code == 200 : j_resp = json . loads ( polite_string ( resp . content ) ) if 'them' in j_resp and len ( j_resp [ 'them' ] ) == 1 : kb_obj = j_resp [ 'them' ] [ 0 ] if fingerprint : return fingerprint_...
def notification_selected_sm_changed ( self , model , prop_name , info ) : """If a new state machine is selected , make sure expansion state is stored and tree updated"""
selected_state_machine_id = self . model . selected_state_machine_id if selected_state_machine_id is None : return self . update ( )
def quantile_for_single_value ( self , ** kwargs ) : """Returns quantile of each column or row . Returns : A new QueryCompiler object containing the quantile of each column or row ."""
if self . _is_transposed : kwargs [ "axis" ] = kwargs . get ( "axis" , 0 ) ^ 1 return self . transpose ( ) . quantile_for_single_value ( ** kwargs ) axis = kwargs . get ( "axis" , 0 ) q = kwargs . get ( "q" , 0.5 ) assert type ( q ) is float def quantile_builder ( df , ** kwargs ) : try : return pan...
def columns_classes ( self ) : '''returns columns count'''
md = 12 / self . objects_per_row sm = None if self . objects_per_row > 2 : sm = 12 / ( self . objects_per_row / 2 ) return md , ( sm or md ) , 12
def get_fld2val ( self , name , vals ) : """Describe summary statistics for a list of numbers ."""
if vals : return self . _init_fld2val_stats ( name , vals ) return self . _init_fld2val_null ( name )
def merge_versioned ( releases , schema = None , merge_rules = None ) : """Merges a list of releases into a versionedRelease ."""
if not merge_rules : merge_rules = get_merge_rules ( schema ) merged = OrderedDict ( ) for release in sorted ( releases , key = lambda release : release [ 'date' ] ) : release = release . copy ( ) # Don ' t version the OCID . ocid = release . pop ( 'ocid' ) merged [ ( 'ocid' , ) ] = ocid release...
def appraise_source_model ( self ) : """Identify parameters defined in NRML source model file , so that shapefile contains only source model specific fields ."""
for src in self . sources : # source params src_taglist = get_taglist ( src ) if "areaSource" in src . tag : self . has_area_source = True npd_node = src . nodes [ src_taglist . index ( "nodalPlaneDist" ) ] npd_size = len ( npd_node ) hdd_node = src . nodes [ src_taglist . index ...
def deletelogicalnetwork ( check_processor = default_logicalnetwork_delete_check , reorder_dict = default_iterate_dict ) : """: param check _ processor : check _ processor ( logicalnetwork , logicalnetworkmap , physicalnetwork , physicalnetworkmap , walk , write , \ * , parameters )"""
def walker ( walk , write , timestamp , parameters_dict ) : for key , parameters in reorder_dict ( parameters_dict ) : try : value = walk ( key ) except KeyError : pass else : try : logmap = walk ( LogicalNetworkMap . _network . leftkey ( k...
def MobileDevice ( self , data = None , subset = None ) : """{ dynamic _ docstring }"""
return self . factory . get_object ( jssobjects . MobileDevice , data , subset )
def children_after_parents ( self , piper1 , piper2 ) : """Custom compare function . Returns ` ` 1 ` ` if the first ` ` Piper ` ` instance is upstream of the second ` ` Piper ` ` instance , ` ` - 1 ` ` if the first ` ` Piper ` ` is downstream of the second ` ` Piper ` ` and ` ` 0 ` ` if the two ` ` Pipers ` `...
if piper1 in self [ piper2 ] . deep_nodes ( ) : return 1 elif piper2 in self [ piper1 ] . deep_nodes ( ) : return - 1 else : return 0
def _can_construct_from_str ( strict_mode : bool , from_type : Type , to_type : Type ) -> bool : """Returns true if the provided types are valid for constructor _ with _ str _ arg conversion Explicitly declare that we are not able to convert primitive types ( they already have their own converters ) : param str...
return to_type not in { int , float , bool }
def extract ( pattern , string , * , assert_equal = False , one = False , condense = False , default = None , default_if_multiple = True , default_if_none = True ) : """Used to extract a given regex pattern from a string , given several options"""
if isinstance ( pattern , str ) : output = get_content ( pattern , string ) else : # Must be a linear container output = [ ] for p in pattern : output += get_content ( p , string ) output = process_output ( output , one = one , condense = condense , default = default , default_if_multiple = default_...
def _gssapi_login ( self ) : """Authenticate to the / ssllogin endpoint with GSSAPI authentication . : returns : deferred that when fired returns a dict from sslLogin"""
method = treq_kerberos . post auth = treq_kerberos . TreqKerberosAuth ( force_preemptive = True ) return self . _request_login ( method , auth = auth )
def get_registry ( entry , runtime ) : """Returns a record registry given an entry and runtime"""
try : records_location_param_id = Id ( 'parameter:recordsRegistry@mongo' ) registry = runtime . get_configuration ( ) . get_value_by_parameter ( records_location_param_id ) . get_string_value ( ) return import_module ( registry ) . __dict__ . get ( entry , { } ) except ( ImportError , AttributeError , KeyEr...
def _read_config_file ( cf , _globals = globals ( ) , _locals = locals ( ) , interactive = True ) : # noqa : E501 """Read a config file : execute a python file while loading scapy , that may contain # noqa : E501 some pre - configured values . If _ globals or _ locals are specified , they will be updated with t...
log_loading . debug ( "Loading config file [%s]" , cf ) try : exec ( compile ( open ( cf ) . read ( ) , cf , 'exec' ) , _globals , _locals ) except IOError as e : if interactive : raise log_loading . warning ( "Cannot read config file [%s] [%s]" , cf , e ) except Exception : if interactive : ...
def image ( self , raw_url , title = '' , alt = '' ) : '''extract the images'''
max_images = self . _config . get ( 'count' ) if max_images is not None and len ( self . _out . images ) >= max_images : # We already have enough images , so bail out return ' ' image_specs = raw_url if title : image_specs += ' "{}"' . format ( title ) alt , container_args = image . parse_alt_text ( alt ) spec_...
def visit ( spht , node ) : """Append opening tags to document body list . : param sphinx . writers . html . SmartyPantsHTMLTranslator spht : Object to modify . : param sphinxcontrib . imgur . nodes . ImgurImageNode node : This class ' instance ."""
if node . options [ 'target' ] : html_attrs_ah = dict ( CLASS = 'reference external image-reference' , href = node . options [ 'target' ] ) spht . body . append ( spht . starttag ( node , 'a' , '' , ** html_attrs_ah ) ) html_attrs_img = dict ( src = node . src , alt = node . options [ 'alt' ] ) if node . option...
def update ( records , column , values ) : """Update the column of records : param records : a list of dictionaries : param column : a string : param values : an iterable or a function : returns : new records with the columns updated > > > movies = [ . . . { ' title ' : ' The Holy Grail ' , ' year ' : 1...
new_records = deepcopy ( records ) if values . __class__ . __name__ == 'function' : for row in new_records : row [ column ] = values ( row [ column ] ) elif isiterable ( values ) : for i , row in enumerate ( new_records ) : row [ column ] = values [ i ] else : msg = "You must provide a funct...
def fake_lens_path_set ( lens_path , value , obj ) : """Simulates R . set with a lens _ path since we don ' t have lens functions : param lens _ path : Array of string paths : param value : The value to set at the lens path : param obj : Object containing the given path : return : The value at the path or N...
segment = head ( lens_path ) obj_copy = copy . copy ( obj ) def set_array_index ( i , v , l ) : # Fill the array with None up to the given index and set the index to v try : l [ i ] = v except IndexError : for _ in range ( i - len ( l ) + 1 ) : l . append ( None ) l [ i ] = v...
def delete_doc ( self , doc_id , revision ) : '''Imitates sending DELETE request to CouchDB server'''
d = defer . Deferred ( ) self . increase_stat ( 'delete_doc' ) try : doc = self . _get_doc ( doc_id ) if doc [ '_rev' ] != revision : raise ConflictError ( "Document update conflict." ) if doc . get ( '_deleted' , None ) : raise NotFoundError ( '%s deleted' % doc_id ) doc [ '_deleted' ] ...
def patch_namespaced_role_binding ( self , name , namespace , body , ** kwargs ) : # noqa : E501 """patch _ namespaced _ role _ binding # noqa : E501 partially update the specified RoleBinding # noqa : E501 This method makes a synchronous HTTP request by default . To make an asynchronous HTTP request , please...
kwargs [ '_return_http_data_only' ] = True if kwargs . get ( 'async_req' ) : return self . patch_namespaced_role_binding_with_http_info ( name , namespace , body , ** kwargs ) # noqa : E501 else : ( data ) = self . patch_namespaced_role_binding_with_http_info ( name , namespace , body , ** kwargs ) # no...
def _handle_unsubscribed ( self , * args , chanId = None , ** kwargs ) : """Handles responses to unsubscribe ( ) commands - removes a channel id from the client . : param chanId : int , represent channel id as assigned by server"""
log . debug ( "_handle_unsubscribed: %s - %s" , chanId , kwargs ) try : self . channels . pop ( chanId ) except KeyError : raise NotRegisteredError ( ) try : self . _heartbeats . pop ( chanId ) except KeyError : pass try : self . _late_heartbeats . pop ( chanId ) except KeyError : pass
def _curve ( x1 , y1 , x2 , y2 , hunit = HUNIT , vunit = VUNIT ) : """Return a PyX curved path from ( x1 , y1 ) to ( x2 , y2 ) , such that the slope at either end is zero ."""
ax1 , ax2 , axm = x1 * hunit , x2 * hunit , ( x1 + x2 ) * hunit / 2 ay1 , ay2 = y1 * vunit , y2 * vunit return pyx . path . curve ( ax1 , ay1 , axm , ay1 , axm , ay2 , ax2 , ay2 )
def isochrone_to_aa ( w , potential ) : """Transform the input cartesian position and velocity to action - angle coordinates in the Isochrone potential . See Section 3.5.2 in Binney & Tremaine ( 2008 ) , and be aware of the errata entry for Eq . 3.225. This transformation is analytic and can be used as a " ...
if not isinstance ( potential , PotentialBase ) : potential = IsochronePotential ( ** potential ) usys = potential . units GM = ( G * potential . parameters [ 'm' ] ) . decompose ( usys ) . value b = potential . parameters [ 'b' ] . decompose ( usys ) . value E = w . energy ( Hamiltonian ( potential ) ) . decompose...
def random_walk ( self , path_length , alpha = 0 , rand = random . Random ( ) , start = None ) : """Returns a truncated random walk . path _ length : Length of the random walk . alpha : probability of restarts . start : the start node of the random walk ."""
G = self if start : path = [ start ] else : # Sampling is uniform w . r . t V , and not w . r . t E path = [ rand . choice ( list ( G . keys ( ) ) ) ] while len ( path ) < path_length : cur = path [ - 1 ] if len ( G [ cur ] ) > 0 : if rand . random ( ) >= alpha : path . append ( rand...
def remove_listener ( self , uid ) : """Remove listener with given uid ."""
self . listeners [ : ] = ( listener for listener in self . listeners if listener [ 'uid' ] != uid )
def gotoItem ( self , path ) : """Goes to a particular path within the XDK . : param path | < str >"""
if not path : return sections = nativestring ( path ) . split ( '/' ) check = projex . text . underscore ( sections [ 0 ] ) for i in range ( self . uiContentsTREE . topLevelItemCount ( ) ) : item = self . uiContentsTREE . topLevelItem ( i ) if check in ( projex . text . underscore ( item . text ( 0 ) ) , it...
def _close ( self ) : """Close the TCP connection ."""
self . client . stop ( ) self . open = False self . waiting = False
def handle ( self , connection_id , message_content ) : """A connection must use one of the supported authorization types to prove their identity . If a requester deviates from the procedure in any way , the requester will be rejected and the connection will be closed . The same is true if the requester sends...
message = ConnectionRequest ( ) message . ParseFromString ( message_content ) LOGGER . debug ( "got connect message from %s. sending ack" , connection_id ) # Need to use join here to get the string " 0.0.0.0 " . Otherwise , # bandit thinks we are binding to all interfaces and returns a # Medium security risk . interfac...
def return_on_initial_capital ( capital , period_pl , leverage = None ) : """Return the daily return series based on the capital"""
if capital <= 0 : raise ValueError ( 'cost must be a positive number not %s' % capital ) leverage = leverage or 1. eod = capital + ( leverage * period_pl . cumsum ( ) ) ltd_rets = ( eod / capital ) - 1. dly_rets = ltd_rets dly_rets . iloc [ 1 : ] = ( 1. + ltd_rets ) . pct_change ( ) . iloc [ 1 : ] return dly_rets
def random_leaf ( self ) : "Returns a random variable with the associated weight"
for i in range ( self . _number_tries_feasible_ind ) : var = np . random . randint ( self . nvar ) v = self . _random_leaf ( var ) if v is None : continue return v raise RuntimeError ( "Could not find a suitable random leaf" )
def formatTime ( self , record , datefmt = None ) : """Format time , including milliseconds ."""
formatted = super ( PalletFormatter , self ) . formatTime ( record , datefmt = datefmt ) return formatted + '.%03dZ' % record . msecs
def get_cpu_info ( self ) -> str : '''Show device CPU information .'''
output , _ = self . _execute ( '-s' , self . device_sn , 'shell' , 'cat' , '/proc/cpuinfo' ) return output
def clear_time_value ( self ) : """stub"""
if ( self . get_time_value_metadata ( ) . is_read_only ( ) or self . get_time_value_metadata ( ) . is_required ( ) ) : raise NoAccess ( ) self . my_osid_object_form . _my_map [ 'timeValue' ] = dict ( self . get_time_value_metadata ( ) . get_default_duration_values ( ) [ 0 ] )
def join ( self , other ) : """Join two headings into a new one . It assumes that self and other are headings that share no common dependent attributes ."""
return Heading ( [ self . attributes [ name ] . todict ( ) for name in self . primary_key ] + [ other . attributes [ name ] . todict ( ) for name in other . primary_key if name not in self . primary_key ] + [ self . attributes [ name ] . todict ( ) for name in self . dependent_attributes if name not in other . primary_...
def get_raw_data ( self ) : """Get raw HID report based on internal report item settings , creates new c _ ubytes storage"""
if self . __report_kind != HidP_Output and self . __report_kind != HidP_Feature : raise HIDError ( "Only for output or feature reports" ) self . __prepare_raw_data ( ) # return read - only object for internal storage return helpers . ReadOnlyList ( self . __raw_data )
def default_font_toggled ( self , settings , key , user_data ) : """If the gconf var use _ default _ font be changed , this method will be called and will change the font style to the gnome default or to the chosen font in style / font / style in all terminals open ."""
font_name = None if settings . get_boolean ( key ) : gio_settings = Gio . Settings ( 'org.gnome.desktop.interface' ) font_name = gio_settings . get_string ( 'monospace-font-name' ) else : font_name = self . settings . styleFont . get_string ( 'style' ) if not font_name : log . error ( "Error: unable to ...
def typewrite ( message , interval = 0.0 , pause = None , _pause = True ) : """Performs a keyboard key press down , followed by a release , for each of the characters in message . The message argument can also be list of strings , in which case any valid keyboard name can be used . Since this performs a seq...
interval = float ( interval ) _failSafeCheck ( ) for c in message : if len ( c ) > 1 : c = c . lower ( ) press ( c , _pause = False ) time . sleep ( interval ) _failSafeCheck ( ) _autoPause ( pause , _pause )
def sils ( T , f , c , d , h ) : """sils - - LP lotsizing for the single item lot sizing problem Parameters : - T : number of periods - P : set of products - f [ t ] : set - up costs ( on period t ) - c [ t ] : variable costs - d [ t ] : demand values - h [ t ] : holding costs Returns a model , read...
model = Model ( "single item lotsizing" ) Ts = range ( 1 , T + 1 ) M = sum ( d [ t ] for t in Ts ) y , x , I = { } , { } , { } for t in Ts : y [ t ] = model . addVar ( vtype = "I" , ub = 1 , name = "y(%s)" % t ) x [ t ] = model . addVar ( vtype = "C" , ub = M , name = "x(%s)" % t ) I [ t ] = model . addVar ...
def retrieve_page ( self , method , path , post_params = { } , headers = { } , status = 200 , username = None , password = None , * args , ** kwargs ) : """Makes the actual request . This will also go through and generate the needed steps to make the request , i . e . basic auth . ` ` method ` ` : Any support...
# Copy headers so that making changes here won ' t affect the original headers = headers . copy ( ) # Update basic auth information basicauth = self . _prepare_basicauth ( username , password ) if basicauth : headers . update ( [ basicauth ] ) # If this is a POST or PUT , we can put the data into the body as # form...
def verify ( path ) : """Verify folder file format The folder file format is only valid when there is only one file format present ."""
valid = True fifo = SeriesFolder . _search_files ( path ) # dataset size if len ( fifo ) == 0 : valid = False # number of different file formats fifmts = [ ff [ 1 ] for ff in fifo ] if len ( set ( fifmts ) ) != 1 : valid = False return valid
def usearch_sort_by_abundance ( fasta_filepath , output_filepath = None , sizein = True , sizeout = True , minsize = 0 , log_name = "abundance_sort.log" , usersort = False , HALT_EXEC = False , save_intermediate_files = False , remove_usearch_logs = False , working_dir = None ) : """Sorts fasta file by abundance ...
if not output_filepath : _ , output_filepath = mkstemp ( prefix = 'usearch_abundance_sorted' , suffix = '.fasta' ) log_filepath = join ( working_dir , "minsize_" + str ( minsize ) + "_" + log_name ) params = { } app = Usearch ( params , WorkingDir = working_dir , HALT_EXEC = HALT_EXEC ) if usersort : app . Para...
def dispatch ( self , * args , ** kwargs ) : """This decorator sets this view to have restricted permissions ."""
return super ( StrainDelete , self ) . dispatch ( * args , ** kwargs )
def check_input ( self , token ) : """Performs checks on the input token . Raises an exception if unsupported . : param token : the token to check : type token : Token"""
if token is None : raise Exception ( self . full_name + ": No token provided!" ) if isinstance ( token . payload , str ) : return raise Exception ( self . full_name + ": Unhandled class: " + classes . get_classname ( token . payload ) )
async def set_mode ( self , target , * modes ) : """Set mode on target . Users should only rely on the mode actually being changed when receiving an on _ { channel , user } _ mode _ change callback ."""
if self . is_channel ( target ) and not self . in_channel ( target ) : raise NotInChannel ( target ) await self . rawmsg ( 'MODE' , target , * modes )
def perform_command ( self ) : """Perform command and return the appropriate exit code . : rtype : int"""
self . log ( u"This function should be overloaded in derived classes" ) self . log ( [ u"Invoked with %s" , self . actual_arguments ] ) return self . NO_ERROR_EXIT_CODE
def serve_coil_assets ( path ) : """Serve Coil assets . This is meant to be used ONLY by the internal dev server . Please configure your web server to handle requests to this URL : : / coil _ assets / = > coil / data / coil _ assets"""
res = pkg_resources . resource_filename ( 'coil' , os . path . join ( 'data' , 'coil_assets' ) ) return send_from_directory ( res , path )
def plot_sn_discovery_ratio_map ( log , snSurveyDiscoveryTimes , redshifts , peakAppMagList , snCampaignLengthList , extraSurveyConstraints , pathToOutputPlotFolder ) : """* Plot the SN discoveries and non - discoveries in a polar plot as function of redshift * * * Key Arguments : * * - ` ` log ` ` - - logger ...
# # # # # # > IMPORTS # # # # # # # STANDARD LIB # # import sys # # THIRD PARTY # # import matplotlib . pyplot as plt import numpy as np # # LOCAL APPLICATION # # import dryxPython . plotting as dp filters = [ 'g' , 'r' , 'i' , 'z' ] faintMagLimit = extraSurveyConstraints [ 'Faint-Limit of Peak Magnitude' ] # # # # # #...
def _calcOrbits ( self ) : """Prepares data structure for breaking data into orbits . Not intended for end user ."""
# if the breaks between orbit have not been defined , define them # also , store the data so that grabbing different orbits does not # require reloads of whole dataset if len ( self . _orbit_breaks ) == 0 : # determine orbit breaks self . _detBreaks ( ) # store a copy of data self . _fullDayData = self . sa...
def send_audio ( self , chat_id , audio , duration = None , performer = None , title = None , reply_to_message_id = None , reply_markup = None ) : """Use this method to send audio files , if you want Telegram clients to display them in the music player . Your audio must be in the . mp3 format . On success , the s...
self . logger . info ( 'sending audio payload %s' , audio ) payload = dict ( chat_id = chat_id , duration = duration , performer = performer , title = title , reply_to_message_id = reply_to_message_id , reply_markup = reply_markup ) files = dict ( audio = open ( audio , 'rb' ) ) return Message . from_api ( self , ** se...
def get_post_data ( self ) : '''Get all the arguments from post request . Only get the first argument by default .'''
post_data = { } for key in self . request . arguments : post_data [ key ] = self . get_arguments ( key ) [ 0 ] return post_data
def is_none ( self ) : """Ensures : attr : ` subject ` is ` ` None ` ` ."""
self . _run ( unittest_case . assertIsNone , ( self . _subject , ) ) return ChainInspector ( self . _subject )
def get_share_dirname ( url ) : '''从url中提取出当前的目录'''
dirname_match = re . search ( '(dir|path)=([^&]+)' , encoder . decode_uri_component ( url ) ) if dirname_match : return dirname_match . group ( 2 ) else : return None
def analyze ( self , scratch , ** kwargs ) : """Run and return the results from the DuplicateScripts plugin . Only takes into account scripts with more than 3 blocks ."""
scripts_set = set ( ) for script in self . iter_scripts ( scratch ) : if script [ 0 ] . type . text == 'define %s' : continue # Ignore user defined scripts blocks_list = [ ] for name , _ , _ in self . iter_blocks ( script . blocks ) : blocks_list . append ( name ) blocks_tuple = ...
def find_range_in_section_list ( start , end , section_list ) : """Returns all sections belonging to the given range . The given list is assumed to contain start points of consecutive sections , except for the final point , assumed to be the end point of the last section . For example , the list [ 5 , 8 , 30 ...
ind = find_range_ix_in_section_list ( start , end , section_list ) return section_list [ ind [ 0 ] : ind [ 1 ] ]
def import_ ( zone , path ) : '''Import the configuration to memory from stable storage . zone : string name of zone path : string path of file to export to CLI Example : . . code - block : : bash salt ' * ' zonecfg . import epyon / zones / epyon . cfg'''
ret = { 'status' : True } # create from file _dump_cfg ( path ) res = __salt__ [ 'cmd.run_all' ] ( 'zonecfg -z {zone} -f {path}' . format ( zone = zone , path = path , ) ) ret [ 'status' ] = res [ 'retcode' ] == 0 ret [ 'message' ] = res [ 'stdout' ] if ret [ 'status' ] else res [ 'stderr' ] if ret [ 'message' ] == '' ...
def open ( cls , name = None , mode = "r" , fileobj = None , bufsize = RECORDSIZE , ** kwargs ) : """Open a tar archive for reading , writing or appending . Return an appropriate TarFile class . mode : ' r ' or ' r : * ' open for reading with transparent compression ' r : ' open for reading exclusively unco...
if not name and not fileobj : raise ValueError ( "nothing to open" ) if mode in ( "r" , "r:*" ) : # Find out which * open ( ) is appropriate for opening the file . for comptype in cls . OPEN_METH : func = getattr ( cls , cls . OPEN_METH [ comptype ] ) if fileobj is not None : saved_p...
def updateDefinition ( self , json_dict ) : """The updateDefinition operation supports updating a definition property in a hosted feature service . The result of this operation is a response indicating success or failure with error code and description . Input : json _ dict - part to add to host service ....
definition = None if json_dict is not None : if isinstance ( json_dict , collections . OrderedDict ) == True : definition = json_dict else : definition = collections . OrderedDict ( ) if 'hasStaticData' in json_dict : definition [ 'hasStaticData' ] = json_dict [ 'hasStaticDat...
def crypto_validator ( func ) : """This a decorator to be used for any method relying on the cryptography library . # noqa : E501 Its behaviour depends on the ' crypto _ valid ' attribute of the global ' conf ' ."""
def func_in ( * args , ** kwargs ) : if not conf . crypto_valid : raise ImportError ( "Cannot execute crypto-related method! " "Please install python-cryptography v1.7 or later." ) # noqa : E501 return func ( * args , ** kwargs ) return func_in
def set_pragmas ( self , pragmas ) : """Set pragmas for the current database connection . Parameters pragmas : dict Dictionary of pragmas ; see constants . default _ pragmas for a template and http : / / www . sqlite . org / pragma . html for a full list ."""
self . pragmas = pragmas c = self . conn . cursor ( ) c . executescript ( ';\n' . join ( [ 'PRAGMA %s=%s' % i for i in self . pragmas . items ( ) ] ) ) self . conn . commit ( )
def astra_projection_geometry ( geometry ) : """Create an ASTRA projection geometry from an ODL geometry object . As of ASTRA version 1.7 , the length values are not required any more to be rescaled for 3D geometries and non - unit ( but isotropic ) voxel sizes . Parameters geometry : ` Geometry ` ODL pro...
if not isinstance ( geometry , Geometry ) : raise TypeError ( '`geometry` {!r} is not a `Geometry` instance' '' . format ( geometry ) ) if 'astra' in geometry . implementation_cache : # Shortcut , reuse already computed value . return geometry . implementation_cache [ 'astra' ] if not geometry . det_partition ....
def compat_serializer_attr ( serializer , obj ) : """Required only for DRF 3.1 , which does not make dynamically added attribute available in obj in serializer . This is a quick solution but works without breajing anything ."""
if DRFVLIST [ 0 ] == 3 and DRFVLIST [ 1 ] == 1 : for i in serializer . instance : if i . id == obj . id : return i else : return obj
def get_bip32_address ( self , ecdh = False ) : """Compute BIP32 derivation address according to SLIP - 0013/0017."""
index = struct . pack ( '<L' , self . identity_dict . get ( 'index' , 0 ) ) addr = index + self . to_bytes ( ) log . debug ( 'bip32 address string: %r' , addr ) digest = hashlib . sha256 ( addr ) . digest ( ) s = io . BytesIO ( bytearray ( digest ) ) hardened = 0x80000000 addr_0 = 17 if bool ( ecdh ) else 13 address_n ...
def get_hist ( rfile , histname , get_overflow = False ) : """Read a 1D Histogram ."""
import root_numpy as rnp rfile = open_rfile ( rfile ) hist = rfile [ histname ] xlims = np . array ( list ( hist . xedges ( ) ) ) bin_values = rnp . hist2array ( hist , include_overflow = get_overflow ) rfile . close ( ) return bin_values , xlims
def plotPointing ( self , maptype = None , colour = 'b' , mod3 = 'r' , showOuts = True , ** kwargs ) : """Plot the FOV"""
if maptype is None : maptype = self . defaultMap radec = self . currentRaDec for ch in radec [ : , 2 ] [ : : 4 ] : idx = np . where ( radec [ : , 2 ] . astype ( np . int ) == ch ) [ 0 ] idx = np . append ( idx , idx [ 0 ] ) # % points to draw a box c = colour if ch in self . brokenChannels : ...
def get_correctness_for_response ( self , response ) : """get measure of correctness available for a particular response"""
for answer in self . my_osid_object . get_answers ( ) : if self . _is_match ( response , answer ) : try : return answer . get_score ( ) except AttributeError : return 100 for answer in self . my_osid_object . get_wrong_answers ( ) : if self . _is_match ( response , answer...
async def open_clients_async ( self ) : """Responsible for establishing connection to event hub client throws EventHubsException , IOException , InterruptedException , ExecutionException ."""
await self . partition_context . get_initial_offset_async ( ) # Create event hub client and receive handler and set options self . eh_client = EventHubClientAsync ( self . host . eh_config . client_address , debug = self . host . eph_options . debug_trace , http_proxy = self . host . eph_options . http_proxy ) self . p...
def colon_subscripts ( u ) : """Array colon subscripts foo ( 1:10 ) and colon expressions 1:10 look too similar to each other . Now is the time to find out who is who ."""
if u . __class__ in ( node . arrayref , node . cellarrayref ) : for w in u . args : if w . __class__ is node . expr and w . op == ":" : w . _replace ( op = "::" )