after_merge stringlengths 28 79.6k | before_merge stringlengths 20 79.6k | url stringlengths 38 71 | full_traceback stringlengths 43 922k | traceback_type stringclasses 555
values |
|---|---|---|---|---|
def orpca(
X,
rank,
fast=False,
lambda1=None,
lambda2=None,
method=None,
learning_rate=None,
init=None,
training_samples=None,
momentum=None,
):
"""
This function performs Online Robust PCA
with missing or corrupted data.
Parameters
----------
X : {numpy ... | def orpca(
X,
rank,
fast=False,
lambda1=None,
lambda2=None,
method=None,
learning_rate=None,
init=None,
training_samples=None,
momentum=None,
):
"""
This function performs Online Robust PCA
with missing or corrupted data.
Parameters
----------
X : {numpy ... | https://github.com/hyperspy/hyperspy/issues/1557 | import hyperspy.api as hs
from hyperspy.tests.mva.test_rpca import TestORPCA
test = TestORPCA()
test.setup_method("ml") # why the setup_methods all take a "method" argument, I don't know
test.A.shape
(256, 1024)
s = hs.signals.Signal1D(test.A)
s.data[s.data < 0] = 0
s.decomposition(True, algorithm="ORPCA", output_dimen... | ValueError |
def fft_correlation(in1, in2, normalize=False):
"""Correlation of two N-dimensional arrays using FFT.
Adapted from scipy's fftconvolve.
Parameters
----------
in1, in2 : array
normalize: bool
If True performs phase correlation
"""
s1 = np.array(in1.shape)
s2 = np.array(in2.... | def fft_correlation(in1, in2, normalize=False):
"""Correlation of two N-dimensional arrays using FFT.
Adapted from scipy's fftconvolve.
Parameters
----------
in1, in2 : array
normalize: bool
If True performs phase correlation
"""
s1 = np.array(in1.shape)
s2 = np.array(in2.... | https://github.com/hyperspy/hyperspy/issues/1411 | Traceback (most recent call last):
File "/home/bm424/Documents/phd/dev/test/venv/lib/python3.5/site-packages/IPython/core/interactiveshell.py", line 2881, in run_code
exec(code_obj, self.user_global_ns, self.user_ns)
File "<ipython-input-14-1876e2251fb7>", line 1, in <module>
roi(dat)
File "/home/bm424/Documents/phd/de... | TypeError |
def _line_profile_coordinates(src, dst, linewidth=1):
"""Return the coordinates of the profile of an image along a scan line.
Parameters
----------
src : 2-tuple of numeric scalar (float or int)
The start point of the scan line.
dst : 2-tuple of numeric scalar (float or int)
The end ... | def _line_profile_coordinates(src, dst, linewidth=1):
"""Return the coordinates of the profile of an image along a scan line.
Parameters
----------
src : 2-tuple of numeric scalar (float or int)
The start point of the scan line.
dst : 2-tuple of numeric scalar (float or int)
The end ... | https://github.com/hyperspy/hyperspy/issues/1411 | Traceback (most recent call last):
File "/home/bm424/Documents/phd/dev/test/venv/lib/python3.5/site-packages/IPython/core/interactiveshell.py", line 2881, in run_code
exec(code_obj, self.user_global_ns, self.user_ns)
File "<ipython-input-14-1876e2251fb7>", line 1, in <module>
roi(dat)
File "/home/bm424/Documents/phd/de... | TypeError |
def __init__(
self,
signal1D,
auto_background=True,
auto_add_edges=True,
ll=None,
GOS=None,
dictionary=None,
):
Model1D.__init__(self, signal1D)
self.signal1D = signal1D
self._suspend_auto_fine_structure_width = False
self.convolved = False
self.low_loss = ll
self.GOS... | def __init__(
self,
signal1D,
auto_background=True,
auto_add_edges=True,
ll=None,
GOS=None,
dictionary=None,
):
Model1D.__init__(self, signal1D)
self._suspend_auto_fine_structure_width = False
self.convolved = False
self.low_loss = ll
self.GOS = GOS
self.edges = []
... | https://github.com/hyperspy/hyperspy/issues/1427 | ---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
<ipython-input-21-23a6348573b8> in <module>()
----> 1 m = s.create_model()
/home/magnunor/Documents/HyperSpy/hyperspy/hyperspy/_signals/eels.py in create_model(self, l... | AttributeError |
def signal1D(self, value):
if isinstance(value, EELSSpectrum):
self._signal = value
if self.signal._are_microscope_parameters_missing():
raise ValueError(
"The required microscope parameters are not defined in "
"the EELS spectrum signal metadata. Use "
... | def signal1D(self, value):
if isinstance(value, EELSSpectrum):
self._signal = value
self.signal._are_microscope_parameters_missing()
else:
raise ValueError(
"This attribute can only contain an EELSSpectrum "
"but an object of type %s was provided" % str(type(value... | https://github.com/hyperspy/hyperspy/issues/1427 | ---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
<ipython-input-21-23a6348573b8> in <module>()
----> 1 m = s.create_model()
/home/magnunor/Documents/HyperSpy/hyperspy/hyperspy/_signals/eels.py in create_model(self, l... | AttributeError |
def _get_microscope_name(self, ImageTags):
try:
if ImageTags.Session_Info.Microscope != "[]":
return ImageTags.Session_Info.Microscope
except AttributeError:
if "Name" in ImageTags["Microscope_Info"].keys():
return ImageTags.Microscope_Info.Name
| def _get_microscope_name(self, ImageTags):
try:
if ImageTags.Session_Info.Microscope != "[]":
return ImageTags.Session_Info.Microscope
except AttributeError:
return ImageTags.Microscope_Info.Name
| https://github.com/hyperspy/hyperspy/issues/1293 | ---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
<ipython-input-6-98fa7e0685f8> in <module>()
----> 1 wedge = hs.load()
C:\Anaconda3\lib\site-packages\hyperspy-1.2+dev-py3.5.egg\hyperspy\io.py in load(filenames, sign... | AttributeError |
def get_mapping(self):
is_scanning = "DigiScan" in self.imdict.ImageTags.keys()
mapping = {
"ImageList.TagGroup0.ImageTags.DataBar.Acquisition Date": (
"General.date",
self._get_date,
),
"ImageList.TagGroup0.ImageTags.DataBar.Acquisition Time": (
"Gene... | def get_mapping(self):
is_scanning = "DigiScan" in self.imdict.ImageTags.keys()
mapping = {
"ImageList.TagGroup0.ImageTags.DataBar.Acquisition Date": (
"General.date",
self._get_date,
),
"ImageList.TagGroup0.ImageTags.DataBar.Acquisition Time": (
"Gene... | https://github.com/hyperspy/hyperspy/issues/1293 | ---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
<ipython-input-6-98fa7e0685f8> in <module>()
----> 1 wedge = hs.load()
C:\Anaconda3\lib\site-packages\hyperspy-1.2+dev-py3.5.egg\hyperspy\io.py in load(filenames, sign... | AttributeError |
def align_zero_loss_peak(
self,
calibrate=True,
also_align=[],
print_stats=True,
subpixel=True,
mask=None,
signal_range=None,
show_progressbar=None,
**kwargs,
):
"""Align the zero-loss peak.
This function first aligns the spectra using the result of
`estimate_zero_loss_p... | def align_zero_loss_peak(
self,
calibrate=True,
also_align=[],
print_stats=True,
subpixel=True,
mask=None,
signal_range=None,
show_progressbar=None,
**kwargs,
):
"""Align the zero-loss peak.
This function first aligns the spectra using the result of
`estimate_zero_loss_p... | https://github.com/hyperspy/hyperspy/issues/1301 | ---------------------------------------------------------------------------
IndexError Traceback (most recent call last)
<ipython-input-20-f890f17f75fd> in <module>()
----> 1 s.align_zero_loss_peak()
/home/magnunor/Documents/HyperSpy/hyperspy/hyperspy/_signals/eels.py in align_zero_loss_... | IndexError |
def get_lines_intensity(
self,
xray_lines=None,
integration_windows=2.0,
background_windows=None,
plot_result=False,
only_one=True,
only_lines=("a",),
**kwargs,
):
"""Return the intensity map of selected Xray lines.
The intensities, the number of X-ray counts, are computed by
... | def get_lines_intensity(
self,
xray_lines=None,
integration_windows=2.0,
background_windows=None,
plot_result=False,
only_one=True,
only_lines=("a",),
**kwargs,
):
"""Return the intensity map of selected Xray lines.
The intensities, the number of X-ray counts, are computed by
... | https://github.com/hyperspy/hyperspy/issues/1175 | ---------------------------------------------------------------------------
TypeError Traceback (most recent call last)
<ipython-input-18-0c6100594c5b> in <module>()
----> 1 inten = Pt_wedge.get_lines_intensity(integration_windows=iw_Pt, background_windows=bw_Pt)
2 inten[0].plot()
/User... | TypeError |
def load(self, filename):
"""Load the results of a previous decomposition and
demixing analysis from a file.
Parameters
----------
filename : string
"""
decomposition = np.load(filename)
for key, value in decomposition.items():
if value.dtype == np.dtype("object"):
v... | def load(self, filename):
"""Load the results of a previous decomposition and
demixing analysis from a file.
Parameters
----------
filename : string
"""
decomposition = np.load(filename)
for key, value in decomposition.items():
if value.dtype == np.dtype("object"):
v... | https://github.com/hyperspy/hyperspy/issues/1145 | s = hs.signals.Signal1D(np.random.rand(10,15, 1024))
s.decomposition(True)
s2 = s.get_decomposition_model(9)
s.blind_source_separation(9)
---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
<ipython-input-34-ef9c7adc7bb... | AttributeError |
def summary(self):
"""Prints a summary of the decomposition and demixing parameters
to the stdout
"""
print(self._summary())
| def summary(self):
"""Prints a summary of the decomposition and demixing parameters
to the stdout
"""
summary_str = (
"Decomposition parameters:\n"
"-------------------------\n\n"
+ ("Decomposition algorithm : \t%s\n" % self.decomposition_algorithm)
+ ("Poissonian noise n... | https://github.com/hyperspy/hyperspy/issues/1145 | s = hs.signals.Signal1D(np.random.rand(10,15, 1024))
s.decomposition(True)
s2 = s.get_decomposition_model(9)
s.blind_source_separation(9)
---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
<ipython-input-34-ef9c7adc7bb... | AttributeError |
def _load_dictionary(self, file_data_dict):
"""Load data from dictionary.
Parameters
----------
file_data_dict : dictionary
A dictionary containing at least a 'data' keyword with an array of
arbitrary dimensions. Additionally the dictionary can contain the
following items:
... | def _load_dictionary(self, file_data_dict):
"""Load data from dictionary.
Parameters
----------
file_data_dict : dictionary
A dictionary containing at least a 'data' keyword with an array of
arbitrary dimensions. Additionally the dictionary can contain the
following items:
... | https://github.com/hyperspy/hyperspy/issues/1145 | s = hs.signals.Signal1D(np.random.rand(10,15, 1024))
s.decomposition(True)
s2 = s.get_decomposition_model(9)
s.blind_source_separation(9)
---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
<ipython-input-34-ef9c7adc7bb... | AttributeError |
def ensure_parameters_in_bounds(self):
"""For all active components, snaps their free parameter values to
be within their boundaries (if bounded). Does not touch the array of
values.
"""
for component in self:
if component.active:
for param in component.free_parameters:
... | def ensure_parameters_in_bounds(self):
"""For all active components, snaps their free parameter values to
be within their boundaries (if bounded). Does not touch the array of
values.
"""
for component in self:
if component.active:
for param in component.free_parameters:
... | https://github.com/hyperspy/hyperspy/issues/1062 | TypeError Traceback (most recent call last)
<ipython-input-9-b81665222e1f> in <module>()
----> 1 m1.multifit(fitter='mpfit', bounded=True, kind='smart')
/home/magnunor/Documents/HyperSpy_project/HyperSpy/hyperspy/model.py in multifit(self, mask, fetch_only_fixed, autosave, autosave_ever... | TypeError |
def _export_factors(
self,
factors,
folder=None,
comp_ids=None,
multiple_files=None,
save_figures=False,
save_figures_format="png",
factor_prefix=None,
factor_format=None,
comp_label=None,
cmap=plt.cm.gray,
plot_shifts=True,
plot_char=4,
img_data=None,
same_wi... | def _export_factors(
self,
factors,
folder=None,
comp_ids=None,
multiple_files=None,
save_figures=False,
save_figures_format="png",
factor_prefix=None,
factor_format=None,
comp_label=None,
cmap=plt.cm.gray,
plot_shifts=True,
plot_char=4,
img_data=None,
same_wi... | https://github.com/hyperspy/hyperspy/issues/1095 | ImportErrorTraceback (most recent call last)
<ipython-input-8-b1971df6874d> in <module>()
----> 1 sW.export_decomposition_results(factor_format='msa',loading_format='tif')
/home/smc204/anaconda2/envs/hyperspy/lib/python3.5/site-packages/hyperspy/signal.py in export_decomposition_results(self, comp_ids, folder, calibra... | ImportError |
def _export_loadings(
self,
loadings,
folder=None,
comp_ids=None,
multiple_files=None,
loading_prefix=None,
loading_format=None,
save_figures_format="png",
comp_label=None,
cmap=plt.cm.gray,
save_figures=False,
same_window=False,
calibrate=True,
no_nans=True,
... | def _export_loadings(
self,
loadings,
folder=None,
comp_ids=None,
multiple_files=None,
loading_prefix=None,
loading_format=None,
save_figures_format="png",
comp_label=None,
cmap=plt.cm.gray,
save_figures=False,
same_window=False,
calibrate=True,
no_nans=True,
... | https://github.com/hyperspy/hyperspy/issues/1095 | ImportErrorTraceback (most recent call last)
<ipython-input-8-b1971df6874d> in <module>()
----> 1 sW.export_decomposition_results(factor_format='msa',loading_format='tif')
/home/smc204/anaconda2/envs/hyperspy/lib/python3.5/site-packages/hyperspy/signal.py in export_decomposition_results(self, comp_ids, folder, calibra... | ImportError |
def export_to_dictionary(target, whitelist, dic, fullcopy=True):
"""Exports attributes of target from whitelist.keys() to dictionary dic
All values are references only by default.
Parameters
----------
target : object
must contain the (nested) attributes of the whitelist.keys()
... | def export_to_dictionary(target, whitelist, dic, fullcopy=True):
"""Exports attributes of target from whitelist.keys() to dictionary dic
All values are references only by default.
Parameters
----------
target : object
must contain the (nested) attributes of the whitelist.keys()
... | https://github.com/hyperspy/hyperspy/issues/997 | m = tmp.models.restore('BK_w_fine_structure')
---------------------------------------------------------------------------
EOFError Traceback (most recent call last)
<ipython-input-349-668408e20346> in <module>()
----> 1 tmp.models.restore('BK_w_fine_structure')
/home/josh/git_repos/hyp... | EOFError |
def reconstruct_object(flags, value):
"""Reconstructs the value (if necessary) after having saved it in a
dictionary
"""
if not isinstance(flags, list):
flags = parse_flag_string(flags)
if "sig" in flags:
if isinstance(value, dict):
from hyperspy.signal import Signal
... | def reconstruct_object(flags, value):
"""Reconstructs the value (if necessary) after having saved it in a
dictionary
"""
if not isinstance(flags, list):
flags = parse_flag_string(flags)
if "sig" in flags:
if isinstance(value, dict):
from hyperspy.signal import Signal
... | https://github.com/hyperspy/hyperspy/issues/997 | m = tmp.models.restore('BK_w_fine_structure')
---------------------------------------------------------------------------
EOFError Traceback (most recent call last)
<ipython-input-349-668408e20346> in <module>()
----> 1 tmp.models.restore('BK_w_fine_structure')
/home/josh/git_repos/hyp... | EOFError |
def fit(
self,
fitter=None,
method="ls",
grad=False,
bounded=False,
ext_bounding=False,
update_plot=False,
**kwargs,
):
"""Fits the model to the experimental data.
The chi-squared, reduced chi-squared and the degrees of freedom are
computed automatically when fitting. They a... | def fit(
self,
fitter=None,
method="ls",
grad=False,
bounded=False,
ext_bounding=False,
update_plot=False,
**kwargs,
):
"""Fits the model to the experimental data.
The chi-squared, reduced chi-squared and the degrees of freedom are
computed automatically when fitting. They a... | https://github.com/hyperspy/hyperspy/issues/982 | import hyperspy.api as hs
import numpy as np
s = hs.signals.EELSSpectrum(np.random.random((10, 1000)))
s.set_microscope_parameters(100, 1, 10)
s.add_elements(("C","O"))
m = s.create_model()
/home/fjd29/Python/hyperspy3/hyperspy/models/eelsmodel.py:86: VisibleDeprecationWarning: Adding "background" to the user namespace... | TypeError |
def multifit(
self,
mask=None,
fetch_only_fixed=False,
autosave=False,
autosave_every=10,
show_progressbar=None,
**kwargs,
):
"""Fit the data to the model at all the positions of the
navigation dimensions.
Parameters
----------
mask : {None, numpy.array}
To mask... | def multifit(
self,
mask=None,
fetch_only_fixed=False,
autosave=False,
autosave_every=10,
show_progressbar=None,
**kwargs,
):
"""Fit the data to the model at all the positions of the
navigation dimensions.
Parameters
----------
mask : {None, numpy.array}
To mask... | https://github.com/hyperspy/hyperspy/issues/982 | import hyperspy.api as hs
import numpy as np
s = hs.signals.EELSSpectrum(np.random.random((10, 1000)))
s.set_microscope_parameters(100, 1, 10)
s.add_elements(("C","O"))
m = s.create_model()
/home/fjd29/Python/hyperspy3/hyperspy/models/eelsmodel.py:86: VisibleDeprecationWarning: Adding "background" to the user namespace... | TypeError |
def _print_summary(self):
string = "\n\tTitle: "
string += self.metadata.General.title
if self.metadata.has_item("Signal.signal_type"):
string += "\n\tSignal type: "
string += self.metadata.Signal.signal_type
string += "\n\tData dimensions: "
string += str(self.axes_manager.shape)
... | def _print_summary(self):
string = "\n\tTitle: "
string += self.metadata.General.title.decode("utf8")
if self.metadata.has_item("Signal.signal_type"):
string += "\n\tSignal type: "
string += self.metadata.Signal.signal_type
string += "\n\tData dimensions: "
string += str(self.axes_ma... | https://github.com/hyperspy/hyperspy/issues/924 | s = hs.load("*.msa", stack=True)
Loading individual files
Individual files loaded correctly
---------------------------------------------------------------------------
AttributeError Traceback (most recent call last)
<ipython-input-5-23a60eda1ce6> in <module>()
----> 1 s = hs.load("*.msa", ... | AttributeError |
def _binary_operator_ruler(self, other, op_name):
exception_message = "Invalid dimensions for this operation"
if isinstance(other, Signal):
# Both objects are signals
oam = other.axes_manager
sam = self.axes_manager
if (
sam.navigation_shape == oam.navigation_shape
... | def _binary_operator_ruler(self, other, op_name):
exception_message = "Invalid dimensions for this operation"
if isinstance(other, Signal):
# Both objects are signals
oam = other.axes_manager
sam = self.axes_manager
if (
sam.navigation_shape == oam.navigation_shape
... | https://github.com/hyperspy/hyperspy/issues/911 | In [23]: s = hs.signals.Signal(np.arange(100.))
In [24]: s1 = s / s.max(0)
---------------------------------------------------------------------------
UnboundLocalError Traceback (most recent call last)
<ipython-input-24-91a5f30cc65d> in <module>()
----> 1 s1 = s / s.max(0)
/home/to266/dev/hype... | UnboundLocalError |
def estimate_parameters(self, signal, x1, x2, only_current=False):
"""Estimate the parameters by the two area method
Parameters
----------
signal : Signal instance
x1 : float
Defines the left limit of the spectral range to use for the
estimation.
x2 : float
Defines the r... | def estimate_parameters(self, signal, x1, x2, only_current=False):
"""Estimate the parameters by the two area method
Parameters
----------
signal : Signal instance
x1 : float
Defines the left limit of the spectral range to use for the
estimation.
x2 : float
Defines the r... | https://github.com/hyperspy/hyperspy/issues/466 | ---------------------------------------------------------------------------
TypeError Traceback (most recent call last)
<ipython-input-3-7c69fa23a4d3> in <module>()
----> 1 s.remove_background(signal_range=(0,100), background_type='Polynomial')
/media/storage/PhD/software/hyperspy/dev/h... | TypeError |
def estimate_parameters(self, signal, x1, x2, only_current=False):
"""Estimate the parameters by the two area method
Parameters
----------
signal : Signal instance
x1 : float
Defines the left limit of the spectral range to use for the
estimation.
x2 : float
Defines the r... | def estimate_parameters(self, signal, x1, x2, only_current=False):
"""Estimate the parameters by the two area method
Parameters
----------
signal : Signal instance
x1 : float
Defines the left limit of the spectral range to use for the
estimation.
x2 : float
Defines the r... | https://github.com/hyperspy/hyperspy/issues/466 | ---------------------------------------------------------------------------
TypeError Traceback (most recent call last)
<ipython-input-3-7c69fa23a4d3> in <module>()
----> 1 s.remove_background(signal_range=(0,100), background_type='Polynomial')
/media/storage/PhD/software/hyperspy/dev/h... | TypeError |
def run(self):
"""Load skills and update periodically from disk and internet."""
self._remove_git_locks()
self._connected_event.wait()
if (
not self.skill_updater.defaults_installed()
and self.skills_config["auto_update"]
):
LOG.info("Not all default skills are installed, per... | def run(self):
"""Load skills and update periodically from disk and internet."""
self._remove_git_locks()
self._connected_event.wait()
if (
not self.skill_updater.defaults_installed()
and self.skills_config["auto_update"]
):
LOG.info("Not all default skills are installed, per... | https://github.com/MycroftAI/mycroft-core/issues/2822 | 2021-02-04 11:35:41.063 | ERROR | 20080 | mycroft.skills.skill_manager:run:260 | Something really unexpected has occured and the skill manager loop safety harness was hit.
Traceback (most recent call last):
File "/home/gez/mycroft-core/mycroft/skills/skill_manager.py", line 248, in run
self._load_new_skills()
File "... | FileNotFoundError |
def __init__(self, key_phrase="hey mycroft", config=None, lang="en-us"):
super().__init__(key_phrase, config, lang)
keyword_file_paths = [
expanduser(x.strip())
for x in self.config.get("keyword_file_path", "hey_mycroft.ppn").split(",")
]
sensitivities = self.config.get("sensitivities", ... | def __init__(self, key_phrase="hey mycroft", config=None, lang="en-us"):
super(PorcupineHotWord, self).__init__(key_phrase, config, lang)
porcupine_path = expanduser(
self.config.get("porcupine_path", join("~", ".mycroft", "Porcupine"))
)
keyword_file_paths = [
expanduser(x.strip())
... | https://github.com/MycroftAI/mycroft-core/issues/2720 | 2020-10-13 18:03:22.296 | INFO | 6577 | mycroft.client.speech.listener:create_wake_word_recognizer:328 | Creating wake word engine
2020-10-13 18:03:22.299 | INFO | 6577 | mycroft.client.speech.listener:create_wake_word_recognizer:351 | Using hotword entry for blueberry
2020-10-13 18:03:22.302 | WARNING | 65... | TypeError |
def update(self, chunk):
"""Update detection state from a chunk of audio data.
Arguments:
chunk (bytes): Audio data to parse
"""
pcm = struct.unpack_from("h" * (len(chunk) // 2), chunk)
self.audio_buffer += pcm
while True:
if len(self.audio_buffer) >= self.porcupine.frame_length... | def update(self, chunk):
pcm = struct.unpack_from("h" * (len(chunk) // 2), chunk)
self.audio_buffer += pcm
while True:
if len(self.audio_buffer) >= self.porcupine.frame_length:
result = self.porcupine.process(
self.audio_buffer[0 : self.porcupine.frame_length]
... | https://github.com/MycroftAI/mycroft-core/issues/2720 | 2020-10-13 18:03:22.296 | INFO | 6577 | mycroft.client.speech.listener:create_wake_word_recognizer:328 | Creating wake word engine
2020-10-13 18:03:22.299 | INFO | 6577 | mycroft.client.speech.listener:create_wake_word_recognizer:351 | Using hotword entry for blueberry
2020-10-13 18:03:22.302 | WARNING | 65... | TypeError |
def found_wake_word(self, frame_data):
"""Check if wakeword has been found.
Returns:
(bool) True if wakeword was found otherwise False.
"""
if self.has_found:
self.has_found = False
return True
return False
| def found_wake_word(self, frame_data):
if self.has_found:
self.has_found = False
return True
return False
| https://github.com/MycroftAI/mycroft-core/issues/2720 | 2020-10-13 18:03:22.296 | INFO | 6577 | mycroft.client.speech.listener:create_wake_word_recognizer:328 | Creating wake word engine
2020-10-13 18:03:22.299 | INFO | 6577 | mycroft.client.speech.listener:create_wake_word_recognizer:351 | Using hotword entry for blueberry
2020-10-13 18:03:22.302 | WARNING | 65... | TypeError |
def stop(self):
"""Stop the hotword engine.
Clean up Porcupine library.
"""
if self.porcupine is not None:
self.porcupine.delete()
| def stop(self):
if self.porcupine is not None:
self.porcupine.delete()
| https://github.com/MycroftAI/mycroft-core/issues/2720 | 2020-10-13 18:03:22.296 | INFO | 6577 | mycroft.client.speech.listener:create_wake_word_recognizer:328 | Creating wake word engine
2020-10-13 18:03:22.299 | INFO | 6577 | mycroft.client.speech.listener:create_wake_word_recognizer:351 | Using hotword entry for blueberry
2020-10-13 18:03:22.302 | WARNING | 65... | TypeError |
def add(self, name, handler, once=False):
"""Create event handler for executing intent or other event.
Arguments:
name (string): IntentParser name
handler (func): Method to call
once (bool, optional): Event handler will be removed after it has
been run onc... | def add(self, name, handler, once=False):
"""Create event handler for executing intent or other event.
Arguments:
name (string): IntentParser name
handler (func): Method to call
once (bool, optional): Event handler will be removed after it has
been run onc... | https://github.com/MycroftAI/mycroft-core/issues/2337 | 12:04:25.758 | INFO | 22386 | mycroft.skills.skill_loader:reload:109 | ATTEMPTING TO RELOAD SKILL: mycroft-alarm.mycroftai
12:04:25.760 | ERROR | 22386 | mycroft.skills.skill_loader:_execute_instance_shutdown:145 | An error occurred while shutting down AlarmSkill
Traceback (most recent call last):
File "/home/fs... | KeyError |
def connect(
host="localhost",
user=None,
password="",
db=None,
port=3306,
unix_socket=None,
charset="",
sql_mode=None,
read_default_file=None,
conv=decoders,
use_unicode=None,
client_flag=0,
cursorclass=Cursor,
init_command=None,
connect_timeout=None,
rea... | def connect(
host="localhost",
user=None,
password="",
db=None,
port=3306,
unix_socket=None,
charset="",
sql_mode=None,
read_default_file=None,
conv=decoders,
use_unicode=None,
client_flag=0,
cursorclass=Cursor,
init_command=None,
connect_timeout=None,
rea... | https://github.com/aio-libs/aiomysql/issues/297 | mysql5 works
Traceback (most recent call last):
File "/usr/local/lib/python3.6/site-packages/aiomysql/connection.py", line 464, in _connect
await self._request_authentication()
File "/usr/local/lib/python3.6/site-packages/aiomysql/connection.py", line 719, in _request_authentication
auth_packet = await self._read_pack... | pymysql.err.OperationalError |
def __init__(
self,
host="localhost",
user=None,
password="",
db=None,
port=3306,
unix_socket=None,
charset="",
sql_mode=None,
read_default_file=None,
conv=decoders,
use_unicode=None,
client_flag=0,
cursorclass=Cursor,
init_command=None,
connect_timeout=No... | def __init__(
self,
host="localhost",
user=None,
password="",
db=None,
port=3306,
unix_socket=None,
charset="",
sql_mode=None,
read_default_file=None,
conv=decoders,
use_unicode=None,
client_flag=0,
cursorclass=Cursor,
init_command=None,
connect_timeout=No... | https://github.com/aio-libs/aiomysql/issues/297 | mysql5 works
Traceback (most recent call last):
File "/usr/local/lib/python3.6/site-packages/aiomysql/connection.py", line 464, in _connect
await self._request_authentication()
File "/usr/local/lib/python3.6/site-packages/aiomysql/connection.py", line 719, in _request_authentication
auth_packet = await self._read_pack... | pymysql.err.OperationalError |
async def _request_authentication(self):
# https://dev.mysql.com/doc/internals/en/connection-phase-packets.html#packet-Protocol::HandshakeResponse
if int(self.server_version.split(".", 1)[0]) >= 5:
self.client_flag |= CLIENT.MULTI_RESULTS
if self.user is None:
raise ValueError("Did not spec... | async def _request_authentication(self):
# https://dev.mysql.com/doc/internals/en/connection-phase-packets.html#packet-Protocol::HandshakeResponse
if int(self.server_version.split(".", 1)[0]) >= 5:
self.client_flag |= CLIENT.MULTI_RESULTS
if self.user is None:
raise ValueError("Did not spec... | https://github.com/aio-libs/aiomysql/issues/297 | mysql5 works
Traceback (most recent call last):
File "/usr/local/lib/python3.6/site-packages/aiomysql/connection.py", line 464, in _connect
await self._request_authentication()
File "/usr/local/lib/python3.6/site-packages/aiomysql/connection.py", line 719, in _request_authentication
auth_packet = await self._read_pack... | pymysql.err.OperationalError |
async def _process_auth(self, plugin_name, auth_packet):
# These auth plugins do their own packet handling
if plugin_name == b"caching_sha2_password":
await self.caching_sha2_password_auth(auth_packet)
self._auth_plugin_used = plugin_name.decode()
elif plugin_name == b"sha256_password":
... | async def _process_auth(self, plugin_name, auth_packet):
if plugin_name == b"mysql_native_password":
# https://dev.mysql.com/doc/internals/en/
# secure-password-authentication.html#packet-Authentication::
# Native41
data = _auth.scramble_native_password(
self._password.en... | https://github.com/aio-libs/aiomysql/issues/297 | mysql5 works
Traceback (most recent call last):
File "/usr/local/lib/python3.6/site-packages/aiomysql/connection.py", line 464, in _connect
await self._request_authentication()
File "/usr/local/lib/python3.6/site-packages/aiomysql/connection.py", line 719, in _request_authentication
auth_packet = await self._read_pack... | pymysql.err.OperationalError |
def _get_full_key(self, key: Optional[Union[DictKeyType, int]]) -> str: ...
| def _get_full_key(self, key: Union[str, Enum, int, None]) -> str: ...
| https://github.com/omry/omegaconf/issues/554 | del cfg["FOO"]
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/jasha10/omegaconf/omegaconf/dictconfig.py", line 405, in __delitem__
del self.__dict__["_content"][key]
KeyError: 'FOO' | KeyError |
def _resolve_with_default(
self,
key: Union[DictKeyType, int],
value: Any,
default_value: Any = DEFAULT_VALUE_MARKER,
) -> Any:
"""returns the value with the specified key, like obj.key and obj['key']"""
def is_mandatory_missing(val: Any) -> bool:
return bool(get_value_kind(val) == Valu... | def _resolve_with_default(
self,
key: Union[str, int, Enum],
value: Any,
default_value: Any = DEFAULT_VALUE_MARKER,
) -> Any:
"""returns the value with the specified key, like obj.key and obj['key']"""
def is_mandatory_missing(val: Any) -> bool:
return bool(get_value_kind(val) == ValueK... | https://github.com/omry/omegaconf/issues/554 | del cfg["FOO"]
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/jasha10/omegaconf/omegaconf/dictconfig.py", line 405, in __delitem__
del self.__dict__["_content"][key]
KeyError: 'FOO' | KeyError |
def _get_full_key(self, key: Union[DictKeyType, int, slice, None]) -> str:
from .listconfig import ListConfig
from .omegaconf import _select_one
if not isinstance(key, (int, str, Enum, float, bool, slice, type(None))):
return ""
def _slice_to_str(x: slice) -> str:
if x.step is not None... | def _get_full_key(self, key: Union[str, Enum, int, slice, None]) -> str:
from .listconfig import ListConfig
from .omegaconf import _select_one
if not isinstance(key, (int, str, Enum, slice, type(None))):
return ""
def _slice_to_str(x: slice) -> str:
if x.step is not None:
r... | https://github.com/omry/omegaconf/issues/554 | del cfg["FOO"]
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/jasha10/omegaconf/omegaconf/dictconfig.py", line 405, in __delitem__
del self.__dict__["_content"][key]
KeyError: 'FOO' | KeyError |
def prepand(full_key: str, parent_type: Any, cur_type: Any, key: Any) -> str:
if isinstance(key, slice):
key = _slice_to_str(key)
elif isinstance(key, Enum):
key = key.name
elif isinstance(key, (int, float, bool)):
key = str(key)
if issubclass(parent_type, ListConfig):
i... | def prepand(full_key: str, parent_type: Any, cur_type: Any, key: Any) -> str:
if isinstance(key, slice):
key = _slice_to_str(key)
elif isinstance(key, Enum):
key = key.name
if issubclass(parent_type, ListConfig):
if full_key != "":
if issubclass(cur_type, ListConfig):
... | https://github.com/omry/omegaconf/issues/554 | del cfg["FOO"]
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/jasha10/omegaconf/omegaconf/dictconfig.py", line 405, in __delitem__
del self.__dict__["_content"][key]
KeyError: 'FOO' | KeyError |
def _s_validate_and_normalize_key(self, key_type: Any, key: Any) -> DictKeyType:
if key_type is Any:
for t in DictKeyType.__args__: # type: ignore
if isinstance(key, t):
return key # type: ignore
raise KeyValidationError("Incompatible key type '$KEY_TYPE'")
elif key... | def _s_validate_and_normalize_key(self, key_type: Any, key: Any) -> DictKeyType:
if key_type is Any:
for t in DictKeyType.__args__: # type: ignore
try:
return self._s_validate_and_normalize_key(key_type=t, key=key)
except KeyValidationError:
pass
... | https://github.com/omry/omegaconf/issues/554 | del cfg["FOO"]
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/jasha10/omegaconf/omegaconf/dictconfig.py", line 405, in __delitem__
del self.__dict__["_content"][key]
KeyError: 'FOO' | KeyError |
def __delitem__(self, key: DictKeyType) -> None:
key = self._validate_and_normalize_key(key)
if self._get_flag("readonly"):
self._format_and_raise(
key=key,
value=None,
cause=ReadonlyConfigError(
"DictConfig in read-only mode does not support deletion"... | def __delitem__(self, key: DictKeyType) -> None:
if self._get_flag("readonly"):
self._format_and_raise(
key=key,
value=None,
cause=ReadonlyConfigError(
"DictConfig in read-only mode does not support deletion"
),
)
if self._get_flag(... | https://github.com/omry/omegaconf/issues/554 | del cfg["FOO"]
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/jasha10/omegaconf/omegaconf/dictconfig.py", line 405, in __delitem__
del self.__dict__["_content"][key]
KeyError: 'FOO' | KeyError |
def _get_full_key(self, key: Optional[Union[DictKeyType, int]]) -> str:
parent = self._get_parent()
if parent is None:
if self._metadata.key is None:
return ""
else:
return str(self._metadata.key)
else:
return parent._get_full_key(self._metadata.key)
| def _get_full_key(self, key: Union[str, Enum, int, None]) -> str:
parent = self._get_parent()
if parent is None:
if self._metadata.key is None:
return ""
else:
return str(self._metadata.key)
else:
return parent._get_full_key(self._metadata.key)
| https://github.com/omry/omegaconf/issues/554 | del cfg["FOO"]
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/jasha10/omegaconf/omegaconf/dictconfig.py", line 405, in __delitem__
del self.__dict__["_content"][key]
KeyError: 'FOO' | KeyError |
def validate_and_convert_to_enum(
enum_type: Type[Enum], value: Any, allow_none: bool = True
) -> Optional[Enum]:
if allow_none and value is None:
return None
if not isinstance(value, (str, int)) and not isinstance(value, enum_type):
raise ValidationError(
f"Value $VALUE ($VALUE... | def validate_and_convert_to_enum(enum_type: Type[Enum], value: Any) -> Optional[Enum]:
if value is None:
return None
if not isinstance(value, (str, int)) and not isinstance(value, enum_type):
raise ValidationError(
f"Value $VALUE ($VALUE_TYPE) is not a valid input for {enum_type}"
... | https://github.com/omry/omegaconf/issues/554 | del cfg["FOO"]
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/jasha10/omegaconf/omegaconf/dictconfig.py", line 405, in __delitem__
del self.__dict__["_content"][key]
KeyError: 'FOO' | KeyError |
def to_container(
cfg: Any,
*,
resolve: bool = False,
enum_to_str: bool = False,
exclude_structured_configs: bool = False,
) -> Union[Dict[DictKeyType, Any], List[Any], None, str]:
"""
Resursively converts an OmegaConf config to a primitive container (dict or list).
:param cfg: the confi... | def to_container(
cfg: Any,
*,
resolve: bool = False,
enum_to_str: bool = False,
exclude_structured_configs: bool = False,
) -> Union[Dict[DictKeyType, Any], List[Any], None, str]:
"""
Resursively converts an OmegaConf config to a primitive container (dict or list).
:param cfg: the confi... | https://github.com/omry/omegaconf/issues/418 | Traceback (most recent call last):
File "cluster.py", line 24, in start_job
OmegaConf.to_container(cfg, resolve=True)
AssertionError
Set the environment variable HYDRA_FULL_ERROR=1 for a complete stack trace. | AssertionError |
def _map_merge(dest: "BaseContainer", src: "BaseContainer") -> None:
"""merge src into dest and return a new copy, does not modified input"""
from omegaconf import DictConfig, OmegaConf, ValueNode
assert isinstance(dest, DictConfig)
assert isinstance(src, DictConfig)
src_type = src._metadata.object... | def _map_merge(dest: "BaseContainer", src: "BaseContainer") -> None:
"""merge src into dest and return a new copy, does not modified input"""
from omegaconf import DictConfig, OmegaConf, ValueNode
assert isinstance(dest, DictConfig)
assert isinstance(src, DictConfig)
src_type = src._metadata.object... | https://github.com/omry/omegaconf/issues/431 | Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/private/home/abaevski/.conda/envs/fairseq-fp16-20200821/lib/python3.6/site-packages/omegaconf/omegaconf.py", line 321, in merge
target.merge_with(*others[1:])
File "/private/home/abaevski/.conda/envs/fairseq-fp16-20200821/lib/python3.6/site-p... | omegaconf.errors.ConfigKeyError |
def _merge_with(
self,
*others: Union["BaseContainer", Dict[str, Any], List[Any], Tuple[Any], Any],
) -> None:
from .dictconfig import DictConfig
from .listconfig import ListConfig
from .omegaconf import OmegaConf
"""merge a list of other Config objects into this one, overriding as needed"""
... | def _merge_with(
self,
*others: Union["BaseContainer", Dict[str, Any], List[Any], Tuple[Any], Any],
) -> None:
from .dictconfig import DictConfig
from .listconfig import ListConfig
from .omegaconf import OmegaConf
"""merge a list of other Config objects into this one, overriding as needed"""
... | https://github.com/omry/omegaconf/issues/431 | Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/private/home/abaevski/.conda/envs/fairseq-fp16-20200821/lib/python3.6/site-packages/omegaconf/omegaconf.py", line 321, in merge
target.merge_with(*others[1:])
File "/private/home/abaevski/.conda/envs/fairseq-fp16-20200821/lib/python3.6/site-p... | omegaconf.errors.ConfigKeyError |
def _is_missing(self) -> bool:
try:
self._dereference_node(throw_on_resolution_failure=False, throw_on_missing=True)
return False
except MissingMandatoryValue:
ret = True
assert isinstance(ret, bool)
return ret
| def _is_missing(self) -> bool:
try:
self._dereference_node(throw_on_missing=True)
return False
except MissingMandatoryValue:
ret = True
assert isinstance(ret, bool)
return ret
| https://github.com/omry/omegaconf/issues/431 | Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/private/home/abaevski/.conda/envs/fairseq-fp16-20200821/lib/python3.6/site-packages/omegaconf/omegaconf.py", line 321, in merge
target.merge_with(*others[1:])
File "/private/home/abaevski/.conda/envs/fairseq-fp16-20200821/lib/python3.6/site-p... | omegaconf.errors.ConfigKeyError |
def get_dataclass_data(
obj: Any, allow_objects: Optional[bool] = None
) -> Dict[str, Any]:
from omegaconf.omegaconf import MISSING, OmegaConf, _maybe_wrap
flags = {"allow_objects": allow_objects} if allow_objects is not None else {}
dummy_parent = OmegaConf.create({}, flags=flags)
d = {}
resol... | def get_dataclass_data(
obj: Any, allow_objects: Optional[bool] = None
) -> Dict[str, Any]:
from omegaconf.omegaconf import MISSING, OmegaConf, _maybe_wrap
flags = {"allow_objects": allow_objects} if allow_objects is not None else {}
dummy_parent = OmegaConf.create({}, flags=flags)
d = {}
for f... | https://github.com/omry/omegaconf/issues/303 | Traceback (most recent call last):
File "test2.py", line 10, in <module>
cfg = OmegaConf.structured(Config)
File "/private/home/odelalleau/.conda/envs/py37-hydra/lib/python3.7/site-packages/omegaconf/omegaconf.py", line 134, in structured
return OmegaConf.create(obj, parent)
File "/private/home/odelalleau/.conda/envs/p... | TypeError |
def _map_merge(dest: "BaseContainer", src: "BaseContainer") -> None:
"""merge src into dest and return a new copy, does not modified input"""
from omegaconf import DictConfig, OmegaConf, ValueNode
assert isinstance(dest, DictConfig)
assert isinstance(src, DictConfig)
src_type = src._metadata.object... | def _map_merge(dest: "BaseContainer", src: "BaseContainer") -> None:
"""merge src into dest and return a new copy, does not modified input"""
from omegaconf import DictConfig, OmegaConf, ValueNode
assert isinstance(dest, DictConfig)
assert isinstance(src, DictConfig)
src_type = src._metadata.object... | https://github.com/omry/omegaconf/issues/336 | Traceback (most recent call last):
File "hydra/_internal/config_load
er_impl.py", line 610, in _load_config_impl
merged = OmegaConf.merge(schema.config, ret.config)
File "omegaconf/omegaconf.py", li
ne 316, in merge
target.merge_with(*others[1:])
File "omegaconf/basecontainer.py"
, line 324, in merge_with
self._format_... | omegaconf.errors.ValidationError |
def expand(node: Container) -> None:
type_ = get_ref_type(node)
if type_ is not None:
_is_optional, type_ = _resolve_optional(type_)
if is_dict_annotation(type_):
node._set_value({})
elif is_list_annotation(type_):
node._set_value([])
else:
nod... | def expand(node: Container) -> None:
type_ = get_ref_type(node)
if type_ is not None:
_is_optional, type_ = _resolve_optional(type_)
if is_dict_annotation(type_):
node._set_value({})
else:
node._set_value(type_)
| https://github.com/omry/omegaconf/issues/336 | Traceback (most recent call last):
File "hydra/_internal/config_load
er_impl.py", line 610, in _load_config_impl
merged = OmegaConf.merge(schema.config, ret.config)
File "omegaconf/omegaconf.py", li
ne 316, in merge
target.merge_with(*others[1:])
File "omegaconf/basecontainer.py"
, line 324, in merge_with
self._format_... | omegaconf.errors.ValidationError |
def _fetch_reference_injections(
fn: Callable[..., Any],
) -> Tuple[Dict[str, Any], Dict[str, Any]]:
# # Hotfix, see: https://github.com/ets-labs/python-dependency-injector/issues/362
if GenericAlias and fn is GenericAlias:
fn = fn.__init__
signature = inspect.signature(fn)
injections = {}... | def _fetch_reference_injections(
fn: Callable[..., Any],
) -> Tuple[Dict[str, Any], Dict[str, Any]]:
signature = inspect.signature(fn)
injections = {}
closing = {}
for parameter_name, parameter in signature.parameters.items():
if not isinstance(parameter.default, _Marker) and not _is_fastap... | https://github.com/ets-labs/python-dependency-injector/issues/362 | Traceback (most recent call last):
File "/home/ventaquil/Git/project/package/__main__.py", line 86, in <module>
sys.exit(main())
File "/home/ventaquil/Git/project/package/__main__.py", line 67, in main
container.wire(modules=[http, manager, socketio], packages=[model])
File "src/dependency_injector/containers.pyx", lin... | ValueError |
def _fetch_modules(package):
modules = [package]
for module_info in pkgutil.walk_packages(
path=package.__path__,
prefix=package.__name__ + ".",
):
module = importlib.import_module(module_info.name)
modules.append(module)
return modules
| def _fetch_modules(package):
modules = [package]
for loader, module_name, is_pkg in pkgutil.walk_packages(
path=package.__path__,
prefix=package.__name__ + ".",
):
module = loader.find_module(module_name).load_module(module_name)
modules.append(module)
return modules
| https://github.com/ets-labs/python-dependency-injector/issues/320 | INFO:root:configuration completed
INFO:root:Configuration container wired successfully
INFO:root:Initializing model...
INFO:root:model: <dependency_injector.wiring.Provide object at 0x00000235228E4250>
Traceback (most recent call last):
File "c:/Users/Federico/Desktop/DeepCleverBot/bot/app.py", line 24, in <module>
bot... | TypeError |
def main():
# bring our logging stuff up as early as possible
debug = logging.DEBUG if "-d" in sys.argv or "--debug" in sys.argv else logging.INFO
_init_logger(debug)
extension_mgr = _init_extensions()
baseline_formatters = [
f.name
for f in filter(
lambda x: hasattr(x.p... | def main():
# bring our logging stuff up as early as possible
debug = logging.DEBUG if "-d" in sys.argv or "--debug" in sys.argv else logging.INFO
_init_logger(debug)
extension_mgr = _init_extensions()
baseline_formatters = [
f.name
for f in filter(
lambda x: hasattr(x.p... | https://github.com/PyCQA/bandit/issues/362 | [main] INFO profile include tests: None
[main] INFO profile exclude tests: None
[main] INFO cli include tests: None
[main] INFO cli exclude tests: None
[main] INFO running on Python 3.6.5
[node_visitor] INFO Unable to find qualified name for module: test.py
Traceback (most recent call last):
Fil... | UnicodeEncodeError |
def is_assigned(self, node):
assigned = False
if self.ignore_nodes:
if isinstance(self.ignore_nodes, (list, tuple, object)):
if isinstance(node, self.ignore_nodes):
return assigned
if isinstance(node, ast.Expr):
assigned = self.is_assigned(node.value)
elif is... | def is_assigned(self, node):
assigned = False
if self.ignore_nodes:
if isinstance(self.ignore_nodes, (list, tuple, object)):
if isinstance(node, self.ignore_nodes):
return assigned
if isinstance(node, ast.Expr):
assigned = self.is_assigned(node.value)
elif is... | https://github.com/PyCQA/bandit/issues/574 | [tester] ERROR Bandit internal error running: django_mark_safe on file ./venv/lib/python3.7/site-packages/django/template/base.py at line 738: 'NoneType' object has no attribute 'id'Traceback (most recent call last):
File "/usr/local/lib/python3.7/site-packages/bandit/core/tester.py", line 64, in run_tests
result = tes... | AttributeError |
def hashlib_new(context):
if isinstance(context.call_function_name_qual, str):
qualname_list = context.call_function_name_qual.split(".")
func = qualname_list[-1]
if "hashlib" in qualname_list and func == "new":
args = context.call_args
keywords = context.call_keyword... | def hashlib_new(context):
if isinstance(context.call_function_name_qual, str):
qualname_list = context.call_function_name_qual.split(".")
func = qualname_list[-1]
if "hashlib" in qualname_list and func == "new":
args = context.call_args
keywords = context.call_keyword... | https://github.com/PyCQA/bandit/issues/504 | $ bandit test_hash_new.py
...
[tester] ERROR Bandit internal error running: hashlib_new on file test_hash_new.py at line 4: 'NoneType' object has no attribute 'lower'Traceback (most recent call last):
File "/home/pshchelo/.virtualenvs/bandit/lib/python3.6/site-packages/bandit/core/tester.py", line 64, in run_t... | AttributeError |
def visit_Str(self, node):
"""Visitor for AST String nodes
add relevant information about node to
the context for use in tests which inspect strings.
:param node: The node that is being inspected
:return: -
"""
self.context["str"] = node.s
if not isinstance(node._bandit_parent, ast.Expr... | def visit_Str(self, node):
"""Visitor for AST String nodes
add relevant information about node to
the context for use in tests which inspect strings.
:param node: The node that is being inspected
:return: -
"""
self.context["str"] = node.s
if not isinstance(node.parent, ast.Expr): # do... | https://github.com/PyCQA/bandit/issues/487 | from bandit.core.config import BanditConfig
from bandit.core.meta_ast import BanditMetaAst
from bandit.core.metrics import Metrics
from bandit.core.node_visitor import BanditNodeVisitor
from bandit.core.test_set import BanditTestSet
from pyflakes.checker import Checker
import ast
profile = {}
bnv = BanditNodeVisitor(
.... | AttributeError |
def visit_Bytes(self, node):
"""Visitor for AST Bytes nodes
add relevant information about node to
the context for use in tests which inspect strings.
:param node: The node that is being inspected
:return: -
"""
self.context["bytes"] = node.s
if not isinstance(node._bandit_parent, ast.E... | def visit_Bytes(self, node):
"""Visitor for AST Bytes nodes
add relevant information about node to
the context for use in tests which inspect strings.
:param node: The node that is being inspected
:return: -
"""
self.context["bytes"] = node.s
if not isinstance(node.parent, ast.Expr): #... | https://github.com/PyCQA/bandit/issues/487 | from bandit.core.config import BanditConfig
from bandit.core.meta_ast import BanditMetaAst
from bandit.core.metrics import Metrics
from bandit.core.node_visitor import BanditNodeVisitor
from bandit.core.test_set import BanditTestSet
from pyflakes.checker import Checker
import ast
profile = {}
bnv = BanditNodeVisitor(
.... | AttributeError |
def generic_visit(self, node):
"""Drive the visitor."""
for _, value in ast.iter_fields(node):
if isinstance(value, list):
max_idx = len(value) - 1
for idx, item in enumerate(value):
if isinstance(item, ast.AST):
if idx < max_idx:
... | def generic_visit(self, node):
"""Drive the visitor."""
for _, value in ast.iter_fields(node):
if isinstance(value, list):
max_idx = len(value) - 1
for idx, item in enumerate(value):
if isinstance(item, ast.AST):
if idx < max_idx:
... | https://github.com/PyCQA/bandit/issues/487 | from bandit.core.config import BanditConfig
from bandit.core.meta_ast import BanditMetaAst
from bandit.core.metrics import Metrics
from bandit.core.node_visitor import BanditNodeVisitor
from bandit.core.test_set import BanditTestSet
from pyflakes.checker import Checker
import ast
profile = {}
bnv = BanditNodeVisitor(
.... | AttributeError |
def linerange_fix(node):
"""Try and work around a known Python bug with multi-line strings."""
# deal with multiline strings lineno behavior (Python issue #16806)
lines = linerange(node)
if hasattr(node, "_bandit_sibling") and hasattr(node._bandit_sibling, "lineno"):
start = min(lines)
d... | def linerange_fix(node):
"""Try and work around a known Python bug with multi-line strings."""
# deal with multiline strings lineno behavior (Python issue #16806)
lines = linerange(node)
if hasattr(node, "sibling") and hasattr(node.sibling, "lineno"):
start = min(lines)
delta = node.sibl... | https://github.com/PyCQA/bandit/issues/487 | from bandit.core.config import BanditConfig
from bandit.core.meta_ast import BanditMetaAst
from bandit.core.metrics import Metrics
from bandit.core.node_visitor import BanditNodeVisitor
from bandit.core.test_set import BanditTestSet
from pyflakes.checker import Checker
import ast
profile = {}
bnv = BanditNodeVisitor(
.... | AttributeError |
def concat_string(node, stop=None):
"""Builds a string from a ast.BinOp chain.
This will build a string from a series of ast.Str nodes wrapped in
ast.BinOp nodes. Something like "a" + "b" + "c" or "a %s" % val etc.
The provided node can be any participant in the BinOp chain.
:param node: (ast.Str ... | def concat_string(node, stop=None):
"""Builds a string from a ast.BinOp chain.
This will build a string from a series of ast.Str nodes wrapped in
ast.BinOp nodes. Something like "a" + "b" + "c" or "a %s" % val etc.
The provided node can be any participant in the BinOp chain.
:param node: (ast.Str ... | https://github.com/PyCQA/bandit/issues/487 | from bandit.core.config import BanditConfig
from bandit.core.meta_ast import BanditMetaAst
from bandit.core.metrics import Metrics
from bandit.core.node_visitor import BanditNodeVisitor
from bandit.core.test_set import BanditTestSet
from pyflakes.checker import Checker
import ast
profile = {}
bnv = BanditNodeVisitor(
.... | AttributeError |
def check_risk(node):
description = "Potential XSS on mark_safe function."
xss_var = node.args[0]
secure = False
if isinstance(xss_var, ast.Name):
# Check if the var are secure
parent = node._bandit_parent
while not isinstance(parent, (ast.Module, ast.FunctionDef)):
... | def check_risk(node):
description = "Potential XSS on mark_safe function."
xss_var = node.args[0]
secure = False
if isinstance(xss_var, ast.Name):
# Check if the var are secure
parent = node.parent
while not isinstance(parent, (ast.Module, ast.FunctionDef)):
parent ... | https://github.com/PyCQA/bandit/issues/487 | from bandit.core.config import BanditConfig
from bandit.core.meta_ast import BanditMetaAst
from bandit.core.metrics import Metrics
from bandit.core.node_visitor import BanditNodeVisitor
from bandit.core.test_set import BanditTestSet
from pyflakes.checker import Checker
import ast
profile = {}
bnv = BanditNodeVisitor(
.... | AttributeError |
def hardcoded_password_string(context):
"""**B105: Test for use of hard-coded password strings**
The use of hard-coded passwords increases the possibility of password
guessing tremendously. This plugin test looks for all string literals and
checks the following conditions:
- assigned to a variable... | def hardcoded_password_string(context):
"""**B105: Test for use of hard-coded password strings**
The use of hard-coded passwords increases the possibility of password
guessing tremendously. This plugin test looks for all string literals and
checks the following conditions:
- assigned to a variable... | https://github.com/PyCQA/bandit/issues/487 | from bandit.core.config import BanditConfig
from bandit.core.meta_ast import BanditMetaAst
from bandit.core.metrics import Metrics
from bandit.core.node_visitor import BanditNodeVisitor
from bandit.core.test_set import BanditTestSet
from pyflakes.checker import Checker
import ast
profile = {}
bnv = BanditNodeVisitor(
.... | AttributeError |
def _evaluate_ast(node):
wrapper = None
statement = ""
if isinstance(node._bandit_parent, ast.BinOp):
out = utils.concat_string(node, node._bandit_parent)
wrapper = out[0]._bandit_parent
statement = out[1]
elif (
isinstance(node._bandit_parent, ast.Attribute)
and... | def _evaluate_ast(node):
wrapper = None
statement = ""
if isinstance(node.parent, ast.BinOp):
out = utils.concat_string(node, node.parent)
wrapper = out[0].parent
statement = out[1]
elif isinstance(node.parent, ast.Attribute) and node.parent.attr == "format":
statement =... | https://github.com/PyCQA/bandit/issues/487 | from bandit.core.config import BanditConfig
from bandit.core.meta_ast import BanditMetaAst
from bandit.core.metrics import Metrics
from bandit.core.node_visitor import BanditNodeVisitor
from bandit.core.test_set import BanditTestSet
from pyflakes.checker import Checker
import ast
profile = {}
bnv = BanditNodeVisitor(
.... | AttributeError |
def blacklist(context, config):
"""Generic blacklist test, B001.
This generic blacklist test will be called for any encountered node with
defined blacklist data available. This data is loaded via plugins using
the 'bandit.blacklists' entry point. Please see the documentation for more
details. Each ... | def blacklist(context, config):
"""Generic blacklist test, B001.
This generic blacklist test will be called for any encountered node with
defined blacklist data available. This data is loaded via plugins using
the 'bandit.blacklists' entry point. Please see the documentation for more
details. Each ... | https://github.com/PyCQA/bandit/issues/344 | ERROR Bandit internal error running: blacklist on file /home/nighty/workspaces/cegeka/usd_api/api_documentation/views.py at line 125: expected string or bufferTraceback (most recent call last):
File "/home/nighty/.virtualenvs/usd_api/local/lib/python2.7/site-packages/bandit/core/tester.py", line 62, in run_tests
result... | TypeError |
def is_assigned(self, node):
assigned = False
if self.ignore_nodes:
if isinstance(self.ignore_nodes, (list, tuple, object)):
if isinstance(node, self.ignore_nodes):
return assigned
if isinstance(node, ast.Expr):
assigned = self.is_assigned(node.value)
elif is... | def is_assigned(self, node):
assigned = False
if self.ignore_nodes:
if isinstance(self.ignore_nodes, (list, tuple, object)):
if isinstance(node, self.ignore_nodes):
return assigned
if isinstance(node, ast.Expr):
assigned = self.is_assigned(node.value)
elif is... | https://github.com/PyCQA/bandit/issues/350 | Bandit internal error running: django_mark_safe on file /home/travis/build/PyCQA/bandit/examples/mark_safe_secure.py at line 33: 'Call' object has no attribute 'kwargs'Traceback (most recent call last):
File "/home/travis/build/PyCQA/bandit/bandit/core/tester.py", line 64, in run_tests
result = test(context)
File "/hom... | AttributeError |
def evaluate_var(xss_var, parent, until, ignore_nodes=None):
secure = False
if isinstance(xss_var, ast.Name):
if isinstance(parent, ast.FunctionDef):
for name in parent.args.args:
arg_name = name.id if six.PY2 else name.arg
if arg_name == xss_var.id:
... | def evaluate_var(xss_var, parent, until, ignore_nodes=None):
secure = False
if isinstance(xss_var, ast.Name):
if isinstance(parent, ast.FunctionDef):
for name in parent.args.args:
if name.id == xss_var.id:
return False # Params are not secure
ana... | https://github.com/PyCQA/bandit/issues/350 | Bandit internal error running: django_mark_safe on file /home/travis/build/PyCQA/bandit/examples/mark_safe_secure.py at line 33: 'Call' object has no attribute 'kwargs'Traceback (most recent call last):
File "/home/travis/build/PyCQA/bandit/bandit/core/tester.py", line 64, in run_tests
result = test(context)
File "/hom... | AttributeError |
def evaluate_call(call, parent, ignore_nodes=None):
secure = False
evaluate = False
if isinstance(call, ast.Call) and isinstance(call.func, ast.Attribute):
if isinstance(call.func.value, ast.Str) and call.func.attr == "format":
evaluate = True
if call.keywords or (six.PY2 and... | def evaluate_call(call, parent, ignore_nodes=None):
secure = False
evaluate = False
if isinstance(call, ast.Call) and isinstance(call.func, ast.Attribute):
if isinstance(call.func.value, ast.Str) and call.func.attr == "format":
evaluate = True
if call.keywords or call.kwargs:... | https://github.com/PyCQA/bandit/issues/350 | Bandit internal error running: django_mark_safe on file /home/travis/build/PyCQA/bandit/examples/mark_safe_secure.py at line 33: 'Call' object has no attribute 'kwargs'Traceback (most recent call last):
File "/home/travis/build/PyCQA/bandit/bandit/core/tester.py", line 64, in run_tests
result = test(context)
File "/hom... | AttributeError |
def transform2call(var):
if isinstance(var, ast.BinOp):
is_mod = isinstance(var.op, ast.Mod)
is_left_str = isinstance(var.left, ast.Str)
if is_mod and is_left_str:
new_call = ast.Call()
new_call.args = []
new_call.args = []
if six.PY2:
... | def transform2call(var):
if isinstance(var, ast.BinOp):
is_mod = isinstance(var.op, ast.Mod)
is_left_str = isinstance(var.left, ast.Str)
if is_mod and is_left_str:
new_call = ast.Call()
new_call.args = []
new_call.args = []
new_call.starargs = ... | https://github.com/PyCQA/bandit/issues/350 | Bandit internal error running: django_mark_safe on file /home/travis/build/PyCQA/bandit/examples/mark_safe_secure.py at line 33: 'Call' object has no attribute 'kwargs'Traceback (most recent call last):
File "/home/travis/build/PyCQA/bandit/bandit/core/tester.py", line 64, in run_tests
result = test(context)
File "/hom... | AttributeError |
def check_risk(node):
description = "Potential XSS on mark_safe function."
xss_var = node.args[0]
secure = False
if isinstance(xss_var, ast.Name):
# Check if the var are secure
parent = node.parent
while not isinstance(parent, (ast.Module, ast.FunctionDef)):
parent ... | def check_risk(node):
description = "Potential XSS on mark_safe function."
xss_var = node.args[0]
secure = False
if isinstance(xss_var, ast.Name):
# Check if the var are secure
parent = node.parent
while not isinstance(parent, (ast.Module, ast.FunctionDef)):
parent ... | https://github.com/PyCQA/bandit/issues/350 | Bandit internal error running: django_mark_safe on file /home/travis/build/PyCQA/bandit/examples/mark_safe_secure.py at line 33: 'Call' object has no attribute 'kwargs'Traceback (most recent call last):
File "/home/travis/build/PyCQA/bandit/bandit/core/tester.py", line 64, in run_tests
result = test(context)
File "/hom... | AttributeError |
def has_shell(context):
keywords = context.node.keywords
result = False
if "shell" in context.call_keywords:
for key in keywords:
if key.arg == "shell":
val = key.value
if isinstance(val, ast.Num):
result = bool(val.n)
e... | def has_shell(context):
keywords = context.node.keywords
if "shell" in context.call_keywords:
for key in keywords:
if key.arg == "shell":
val = key.value
if isinstance(val, ast.Num):
return bool(val.n)
if isinstance(val, ast... | https://github.com/PyCQA/bandit/issues/350 | Bandit internal error running: django_mark_safe on file /home/travis/build/PyCQA/bandit/examples/mark_safe_secure.py at line 33: 'Call' object has no attribute 'kwargs'Traceback (most recent call last):
File "/home/travis/build/PyCQA/bandit/bandit/core/tester.py", line 64, in run_tests
result = test(context)
File "/hom... | AttributeError |
def mtsac_metaworld_mt50(ctxt=None, seed=1, use_gpu=False, _gpu=0):
"""Train MTSAC with MT50 environment.
Args:
ctxt (garage.experiment.ExperimentContext): The experiment
configuration used by LocalRunner to create the snapshotter.
seed (int): Used to seed the random number generato... | def mtsac_metaworld_mt50(ctxt=None, seed=1, use_gpu=False, _gpu=0):
"""Train MTSAC with MT50 environment.
Args:
ctxt (garage.experiment.ExperimentContext): The experiment
configuration used by LocalRunner to create the snapshotter.
seed (int): Used to seed the random number generato... | https://github.com/rlworkgroup/garage/issues/1903 | 2020-08-15 02:07:45 | [mtsac_metaworld_mt50] Setting seed to 1
^T2020-08-15 02:09:26 | [mtsac_metaworld_mt50] Obtaining samples...
Traceback (most recent call last):
File "examples/torch/mtsac_metaworld_mt50.py", line 103, in <module>
mtsac_metaworld_mt50()
File "/home/eholly/venv/lib/python3.5/site-packages/click/core... | ValueError |
def step(self, action):
"""Call step on wrapped env.
This method is necessary to suppress a deprecated warning
thrown by gym.Wrapper.
Args:
action (np.ndarray): An action provided by the agent.
Returns:
np.ndarray: Agent's observation of the current environment
float: Amou... | def step(self, action):
"""Call step on wrapped env.
This method is necessary to suppress a deprecated warning
thrown by gym.Wrapper.
Args:
action (np.ndarray): An action provided by the agent.
Returns:
np.ndarray: Agent's observation of the current environment
float: Amou... | https://github.com/rlworkgroup/garage/issues/1797 | --------------------------------------- --------------
Sampling [####################################] 100%
2020-07-24 12:28:46 | [trpo_gym_tf_cartpole] epoch #3 | Optimizing policy...
2020-07-24 12:28:46 | [trpo_gym_tf_cartpole] epoch #3 | Computing loss before
2020-07-24 12:28:46 | [trpo_gym_tf_cartpole] epoch #3 ... | ValueError |
def step(self, action):
"""Call step on wrapped env.
This method is necessary to suppress a deprecated warning
thrown by gym.Wrapper.
Args:
action (np.ndarray): An action provided by the agent.
Returns:
np.ndarray: Agent's observation of the current environment
float: Amou... | def step(self, action):
"""Call step on wrapped env.
This method is necessary to suppress a deprecated warning
thrown by gym.Wrapper.
Args:
action (np.ndarray): An action provided by the agent.
Returns:
np.ndarray: Agent's observation of the current environment
float: Amou... | https://github.com/rlworkgroup/garage/issues/1797 | --------------------------------------- --------------
Sampling [####################################] 100%
2020-07-24 12:28:46 | [trpo_gym_tf_cartpole] epoch #3 | Optimizing policy...
2020-07-24 12:28:46 | [trpo_gym_tf_cartpole] epoch #3 | Computing loss before
2020-07-24 12:28:46 | [trpo_gym_tf_cartpole] epoch #3 ... | ValueError |
def _gather_rollout(self, rollout_number, last_observation):
assert 0 < self._path_lengths[rollout_number] <= self._max_episode_length
env_infos = self._env_infos[rollout_number]
agent_infos = self._agent_infos[rollout_number]
for k, v in env_infos.items():
env_infos[k] = np.asarray(v)
for k... | def _gather_rollout(self, rollout_number, last_observation):
assert 0 < self._path_lengths[rollout_number] <= self._max_episode_length
traj = TrajectoryBatch(
env_spec=self._envs[rollout_number].spec,
observations=np.asarray(self._observations[rollout_number]),
last_observations=np.asarr... | https://github.com/rlworkgroup/garage/issues/1797 | --------------------------------------- --------------
Sampling [####################################] 100%
2020-07-24 12:28:46 | [trpo_gym_tf_cartpole] epoch #3 | Optimizing policy...
2020-07-24 12:28:46 | [trpo_gym_tf_cartpole] epoch #3 | Computing loss before
2020-07-24 12:28:46 | [trpo_gym_tf_cartpole] epoch #3 ... | ValueError |
def objective_fun(params):
global task_id
exp_prefix = params.pop("exp_prefix")
exp_name = "{exp}_{pid}_{id}".format(exp=exp_prefix, pid=os.getpid(), id=task_id)
max_retries = params.pop("max_retries", 0) + 1
result_timeout = params.pop("result_timeout")
run_experiment_kwargs = params.pop("run_e... | def objective_fun(params):
global task_id
exp_prefix = params.pop("exp_prefix")
exp_name = "{exp}_{pid}_{id}".format(exp=exp_prefix, pid=os.getpid(), id=task_id)
max_retries = params.pop("max_retries", 0) + 1
result_timeout = params.pop("result_timeout")
run_experiment_kwargs = params.pop("run_e... | https://github.com/rlworkgroup/garage/issues/239 | Traceback (most recent call last):
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 191, in <module>
run_experiment(sys.argv)
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 146, in run_experiment
logger.log_parameters_lite(params_log_file, args)
File "/Users... | TypeError |
def launch_hyperopt_search(
task_method,
eval_method,
param_space,
hyperopt_experiment_key,
hyperopt_db_host="localhost",
hyperopt_db_port=1234,
hyperopt_db_name="garage",
n_hyperopt_workers=1,
hyperopt_max_evals=100,
result_timeout=1200,
max_retries=0,
run_experiment_kwa... | def launch_hyperopt_search(
task_method,
eval_method,
param_space,
hyperopt_experiment_key,
hyperopt_db_host="localhost",
hyperopt_db_port=1234,
hyperopt_db_name="garage",
n_hyperopt_workers=1,
hyperopt_max_evals=100,
result_timeout=1200,
max_retries=0,
run_experiment_kwa... | https://github.com/rlworkgroup/garage/issues/239 | Traceback (most recent call last):
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 191, in <module>
run_experiment(sys.argv)
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 146, in run_experiment
logger.log_parameters_lite(params_log_file, args)
File "/Users... | TypeError |
def run_experiment(
method_call=None,
batch_tasks=None,
exp_prefix="experiment",
exp_name=None,
log_dir=None,
script="scripts/run_experiment.py",
python_command="python",
mode="local",
dry=False,
docker_image=None,
aws_config=None,
env=None,
variant=None,
use_tf=F... | def run_experiment(
stub_method_call=None,
batch_tasks=None,
exp_prefix="experiment",
exp_name=None,
log_dir=None,
script="scripts/run_experiment.py",
python_command="python",
mode="local",
dry=False,
docker_image=None,
aws_config=None,
env=None,
variant=None,
use... | https://github.com/rlworkgroup/garage/issues/239 | Traceback (most recent call last):
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 191, in <module>
run_experiment(sys.argv)
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 146, in run_experiment
logger.log_parameters_lite(params_log_file, args)
File "/Users... | TypeError |
def concretize(obj):
if isinstance(obj, dict):
# make sure that there's no hidden caveat
ret = dict()
for k, v in obj.items():
ret[concretize(k)] = concretize(v)
return ret
elif isinstance(obj, (list, tuple)):
return obj.__class__(list(map(concretize, obj)))
... | def concretize(maybe_stub):
if isinstance(maybe_stub, StubMethodCall):
obj = concretize(maybe_stub.obj)
method = getattr(obj, maybe_stub.method_name)
args = concretize(maybe_stub.args)
kwargs = concretize(maybe_stub.kwargs)
return method(*args, **kwargs)
elif isinstance(m... | https://github.com/rlworkgroup/garage/issues/239 | Traceback (most recent call last):
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 191, in <module>
run_experiment(sys.argv)
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 146, in run_experiment
logger.log_parameters_lite(params_log_file, args)
File "/Users... | TypeError |
def log_parameters_lite(log_file, args):
log_params = {}
for param_name, param_value in args.__dict__.items():
log_params[param_name] = param_value
if args.args_data is not None:
log_params["json_args"] = dict()
mkdir_p(os.path.dirname(log_file))
with open(log_file, "w") as f:
... | def log_parameters_lite(log_file, args):
log_params = {}
for param_name, param_value in args.__dict__.items():
log_params[param_name] = param_value
if args.args_data is not None:
stub_method = pickle.loads(base64.b64decode(args.args_data))
method_args = stub_method.kwargs
log... | https://github.com/rlworkgroup/garage/issues/239 | Traceback (most recent call last):
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 191, in <module>
run_experiment(sys.argv)
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 146, in run_experiment
logger.log_parameters_lite(params_log_file, args)
File "/Users... | TypeError |
def log_variant(log_file, variant_data):
mkdir_p(os.path.dirname(log_file))
if hasattr(variant_data, "dump"):
variant_data = variant_data.dump()
with open(log_file, "w") as f:
json.dump(variant_data, f, indent=2, sort_keys=True, cls=MyEncoder)
| def log_variant(log_file, variant_data):
mkdir_p(os.path.dirname(log_file))
if hasattr(variant_data, "dump"):
variant_data = variant_data.dump()
variant_json = stub_to_json(variant_data)
with open(log_file, "w") as f:
json.dump(variant_json, f, indent=2, sort_keys=True, cls=MyEncoder)
| https://github.com/rlworkgroup/garage/issues/239 | Traceback (most recent call last):
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 191, in <module>
run_experiment(sys.argv)
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 146, in run_experiment
logger.log_parameters_lite(params_log_file, args)
File "/Users... | TypeError |
def load_progress(progress_csv_path):
print("Reading %s" % progress_csv_path)
entries = dict()
with open(progress_csv_path, "r") as csvfile:
reader = csv.DictReader(csvfile)
for row in reader:
for k, v in row.items():
if k not in entries:
entri... | def load_progress(progress_csv_path):
print("Reading %s" % progress_csv_path)
entries = dict()
with open(progress_csv_path, "r") as csvfile:
reader = csv.DictReader(csvfile)
for row in reader:
for k, v in row.items():
if k not in entries:
entri... | https://github.com/rlworkgroup/garage/issues/239 | Traceback (most recent call last):
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 191, in <module>
run_experiment(sys.argv)
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 146, in run_experiment
logger.log_parameters_lite(params_log_file, args)
File "/Users... | TypeError |
def extract_distinct_params(
exps_data, excluded_params=("exp_name", "seed", "log_dir"), length=1
):
# all_pairs = unique(flatten([d.flat_params.items() for d in exps_data]))
# if logger:
# logger("(Excluding {excluded})".format(
# excluded=', '.join(excluded_params)))
# def cmp(x,y):
... | def extract_distinct_params(
exps_data, excluded_params=("exp_name", "seed", "log_dir"), l=1
):
# all_pairs = unique(flatten([d.flat_params.items() for d in exps_data]))
# if logger:
# logger("(Excluding {excluded})".format(excluded=', '.join(excluded_params)))
# def cmp(x,y):
# if x < y... | https://github.com/rlworkgroup/garage/issues/239 | Traceback (most recent call last):
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 191, in <module>
run_experiment(sys.argv)
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 146, in run_experiment
logger.log_parameters_lite(params_log_file, args)
File "/Users... | TypeError |
def run_experiment(argv):
default_log_dir = config.LOG_DIR
now = datetime.datetime.now(dateutil.tz.tzlocal())
# avoid name clashes when running distributed jobs
rand_id = str(uuid.uuid4())[:5]
timestamp = now.strftime("%Y_%m_%d_%H_%M_%S_%f_%Z")
default_exp_name = "experiment_%s_%s" % (timestam... | def run_experiment(argv):
default_log_dir = config.LOG_DIR
now = datetime.datetime.now(dateutil.tz.tzlocal())
# avoid name clashes when running distributed jobs
rand_id = str(uuid.uuid4())[:5]
timestamp = now.strftime("%Y_%m_%d_%H_%M_%S_%f_%Z")
default_exp_name = "experiment_%s_%s" % (timestam... | https://github.com/rlworkgroup/garage/issues/239 | Traceback (most recent call last):
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 191, in <module>
run_experiment(sys.argv)
File "/Users/jonathon/Documents/garage/garage/scripts/run_experiment.py", line 146, in run_experiment
logger.log_parameters_lite(params_log_file, args)
File "/Users... | TypeError |
def sync_list_repositories(
executable_path, python_file, module_name, working_directory, attribute
):
from dagster.grpc.types import ListRepositoriesResponse, ListRepositoriesInput
result = check.inst(
execute_unary_api_cli_command(
executable_path,
"list_repositories",
... | def sync_list_repositories(
executable_path, python_file, module_name, working_directory, attribute
):
from dagster.grpc.types import ListRepositoriesResponse, ListRepositoriesInput
return check.inst(
execute_unary_api_cli_command(
executable_path,
"list_repositories",
... | https://github.com/dagster-io/dagster/issues/2772 | Traceback (most recent call last):
File "/Users/sryza/dagster/python_modules/dagster/dagster/api/utils.py", line 11, in execute_command_in_subprocess
subprocess.check_output(parts, stderr=subprocess.STDOUT)
File "/Users/sryza/.pyenv/versions/3.6.8/lib/python3.6/subprocess.py", line 356, in check_output
**kwargs).stdout... | subprocess.CalledProcessError |
def sync_list_repositories_grpc(api_client):
from dagster.grpc.client import DagsterGrpcClient
from dagster.grpc.types import ListRepositoriesResponse
check.inst_param(api_client, "api_client", DagsterGrpcClient)
result = check.inst(
api_client.list_repositories(),
(ListRepositoriesResp... | def sync_list_repositories_grpc(api_client):
from dagster.grpc.client import DagsterGrpcClient
from dagster.grpc.types import ListRepositoriesResponse
check.inst_param(api_client, "api_client", DagsterGrpcClient)
return check.inst(api_client.list_repositories(), ListRepositoriesResponse)
| https://github.com/dagster-io/dagster/issues/2772 | Traceback (most recent call last):
File "/Users/sryza/dagster/python_modules/dagster/dagster/api/utils.py", line 11, in execute_command_in_subprocess
subprocess.check_output(parts, stderr=subprocess.STDOUT)
File "/Users/sryza/.pyenv/versions/3.6.8/lib/python3.6/subprocess.py", line 356, in check_output
**kwargs).stdout... | subprocess.CalledProcessError |
def list_repositories_command(args):
check.inst_param(args, "args", ListRepositoriesInput)
python_file, module_name, working_directory, attribute = (
args.python_file,
args.module_name,
args.working_directory,
args.attribute,
)
try:
loadable_targets = get_loadable... | def list_repositories_command(args):
check.inst_param(args, "args", ListRepositoriesInput)
python_file, module_name, working_directory, attribute = (
args.python_file,
args.module_name,
args.working_directory,
args.attribute,
)
loadable_targets = get_loadable_targets(
... | https://github.com/dagster-io/dagster/issues/2772 | Traceback (most recent call last):
File "/Users/sryza/dagster/python_modules/dagster/dagster/api/utils.py", line 11, in execute_command_in_subprocess
subprocess.check_output(parts, stderr=subprocess.STDOUT)
File "/Users/sryza/.pyenv/versions/3.6.8/lib/python3.6/subprocess.py", line 356, in check_output
**kwargs).stdout... | subprocess.CalledProcessError |
def list_repositories(self):
res = self._query("ListRepositories", api_pb2.ListRepositoriesRequest)
return deserialize_json_to_dagster_namedtuple(
res.serialized_list_repositories_response_or_error
)
| def list_repositories(self):
res = self._query("ListRepositories", api_pb2.ListRepositoriesRequest)
return deserialize_json_to_dagster_namedtuple(
res.serialized_list_repositories_response
)
| https://github.com/dagster-io/dagster/issues/2772 | Traceback (most recent call last):
File "/Users/sryza/dagster/python_modules/dagster/dagster/api/utils.py", line 11, in execute_command_in_subprocess
subprocess.check_output(parts, stderr=subprocess.STDOUT)
File "/Users/sryza/.pyenv/versions/3.6.8/lib/python3.6/subprocess.py", line 356, in check_output
**kwargs).stdout... | subprocess.CalledProcessError |
def __init__(
self,
shutdown_server_event,
loadable_target_origin=None,
heartbeat=False,
heartbeat_timeout=30,
):
super(DagsterApiServer, self).__init__()
check.bool_param(heartbeat, "heartbeat")
check.int_param(heartbeat_timeout, "heartbeat_timeout")
check.invariant(heartbeat_timeo... | def __init__(
self,
shutdown_server_event,
loadable_target_origin=None,
heartbeat=False,
heartbeat_timeout=30,
):
super(DagsterApiServer, self).__init__()
check.bool_param(heartbeat, "heartbeat")
check.int_param(heartbeat_timeout, "heartbeat_timeout")
check.invariant(heartbeat_timeo... | https://github.com/dagster-io/dagster/issues/2772 | Traceback (most recent call last):
File "/Users/sryza/dagster/python_modules/dagster/dagster/api/utils.py", line 11, in execute_command_in_subprocess
subprocess.check_output(parts, stderr=subprocess.STDOUT)
File "/Users/sryza/.pyenv/versions/3.6.8/lib/python3.6/subprocess.py", line 356, in check_output
**kwargs).stdout... | subprocess.CalledProcessError |
def _recon_repository_from_origin(self, repository_origin):
check.inst_param(
repository_origin,
"repository_origin",
RepositoryOrigin,
)
if isinstance(repository_origin, RepositoryGrpcServerOrigin):
return ReconstructableRepository(
self._repository_symbols_and_... | def _recon_repository_from_origin(self, repository_origin):
check.inst_param(
repository_origin,
"repository_origin",
RepositoryOrigin,
)
if isinstance(repository_origin, RepositoryGrpcServerOrigin):
return ReconstructableRepository(
self._repository_code_pointer... | https://github.com/dagster-io/dagster/issues/2772 | Traceback (most recent call last):
File "/Users/sryza/dagster/python_modules/dagster/dagster/api/utils.py", line 11, in execute_command_in_subprocess
subprocess.check_output(parts, stderr=subprocess.STDOUT)
File "/Users/sryza/.pyenv/versions/3.6.8/lib/python3.6/subprocess.py", line 356, in check_output
**kwargs).stdout... | subprocess.CalledProcessError |
def ListRepositories(self, request, _context):
try:
response = ListRepositoriesResponse(
self._repository_symbols_and_code_pointers.loadable_repository_symbols,
executable_path=self._loadable_target_origin.executable_path
if self._loadable_target_origin
else N... | def ListRepositories(self, request, _context):
return api_pb2.ListRepositoriesReply(
serialized_list_repositories_response=serialize_dagster_namedtuple(
ListRepositoriesResponse(
self._loadable_repository_symbols,
executable_path=self._loadable_target_origin.execu... | https://github.com/dagster-io/dagster/issues/2772 | Traceback (most recent call last):
File "/Users/sryza/dagster/python_modules/dagster/dagster/api/utils.py", line 11, in execute_command_in_subprocess
subprocess.check_output(parts, stderr=subprocess.STDOUT)
File "/Users/sryza/.pyenv/versions/3.6.8/lib/python3.6/subprocess.py", line 356, in check_output
**kwargs).stdout... | subprocess.CalledProcessError |
def _evaluate_composite_solid_config(context):
"""Evaluates config for a composite solid and returns CompositeSolidEvaluationResult"""
# Support config mapping override functions
if not is_solid_container_config(context.config_type):
return EvaluateValueResult.empty()
handle = context.config_ty... | def _evaluate_composite_solid_config(context):
"""Evaluates config for a composite solid and returns CompositeSolidEvaluationResult"""
# Support config mapping override functions
if not is_solid_container_config(context.config_type):
return EvaluateValueResult.empty()
handle = context.config_ty... | https://github.com/dagster-io/dagster/issues/1608 | Exception occurred during execution of user config mapping function <lambda> defined by solid prefix_id from definition prefix_id at path root:solids:prefix_id:
Traceback (most recent call last):
File "/usr/local/lib/python3.7/site-packages/dagster/core/types/evaluator/evaluation.py", line 252, in _evaluate_composite_s... | KeyError |
def generate_pbx_build_file(self):
self.ofile.write("\n/* Begin PBXBuildFile section */\n")
templ = '%s /* %s */ = { isa = PBXBuildFile; fileRef = %s /* %s */; settings = { COMPILER_FLAGS = "%s"; }; };\n'
otempl = "%s /* %s */ = { isa = PBXBuildFile; fileRef = %s /* %s */;};\n"
for t in self.build.targ... | def generate_pbx_build_file(self):
self.ofile.write("\n/* Begin PBXBuildFile section */\n")
templ = '%s /* %s */ = { isa = PBXBuildFile; fileRef = %s /* %s */; settings = { COMPILER_FLAGS = "%s"; }; };\n'
otempl = "%s /* %s */ = { isa = PBXBuildFile; fileRef = %s /* %s */;};\n"
for t in self.build.targ... | https://github.com/mesonbuild/meson/issues/589 | Traceback (most recent call last):
File "/usr/local/Cellar/meson/0.31.0/lib/python3.5/site-packages/mesonbuild/mesonmain.py", line 254, in run
app.generate()
File "/usr/local/Cellar/meson/0.31.0/lib/python3.5/site-packages/mesonbuild/mesonmain.py", line 158, in generate
g.generate(intr)
File "/usr/local/Cellar/meson/0.... | KeyError |
def __init__(
self,
name: str,
project: str,
suite: str,
fname: T.List[str],
is_cross_built: bool,
exe_wrapper: T.Optional[dependencies.ExternalProgram],
needs_exe_wrapper: bool,
is_parallel: bool,
cmd_args: T.List[str],
env: build.EnvironmentVariables,
should_fail: bool,... | def __init__(
self,
name: str,
project: str,
suite: str,
fname: T.List[str],
is_cross_built: bool,
exe_wrapper: T.Optional[dependencies.ExternalProgram],
needs_exe_wrapper: bool,
is_parallel: bool,
cmd_args: T.List[str],
env: build.EnvironmentVariables,
should_fail: bool,... | https://github.com/mesonbuild/meson/issues/7613 | Traceback (most recent call last):
File "/usr/lib/python3.8/site-packages/mesonbuild/mesonmain.py", line 131, in run
return options.run_func(options)
File "/usr/lib/python3.8/site-packages/mesonbuild/mtest.py", line 1220, in run
return th.doit()
File "/usr/lib/python3.8/site-packages/mesonbuild/mtest.py", line 975, in ... | AttributeError |
def __init__(self, old_version: str, current_version: str) -> None:
super().__init__(
"Build directory has been generated with Meson version {}, "
"which is incompatible with the current version {}.".format(
old_version, current_version
)
)
self.old_version = old_version
... | def __init__(self, old_version: str, current_version: str) -> None:
super().__init__(
"Build directory has been generated with Meson version {}, "
"which is incompatible with current version {}.".format(
old_version, current_version
)
)
self.old_version = old_version
... | https://github.com/mesonbuild/meson/issues/7613 | Traceback (most recent call last):
File "/usr/lib/python3.8/site-packages/mesonbuild/mesonmain.py", line 131, in run
return options.run_func(options)
File "/usr/lib/python3.8/site-packages/mesonbuild/mtest.py", line 1220, in run
return th.doit()
File "/usr/lib/python3.8/site-packages/mesonbuild/mtest.py", line 975, in ... | AttributeError |
def major_versions_differ(v1: str, v2: str) -> bool:
return v1.split(".")[0:2] != v2.split(".")[0:2]
| def major_versions_differ(v1, v2):
return v1.split(".")[0:2] != v2.split(".")[0:2]
| https://github.com/mesonbuild/meson/issues/7613 | Traceback (most recent call last):
File "/usr/lib/python3.8/site-packages/mesonbuild/mesonmain.py", line 131, in run
return options.run_func(options)
File "/usr/lib/python3.8/site-packages/mesonbuild/mtest.py", line 1220, in run
return th.doit()
File "/usr/lib/python3.8/site-packages/mesonbuild/mtest.py", line 975, in ... | AttributeError |
def configure(self, extra_cmake_options: T.List[str]) -> None:
for_machine = MachineChoice.HOST # TODO make parameter
# Find CMake
cmake_exe = CMakeExecutor(self.env, ">=3.7", for_machine)
if not cmake_exe.found():
raise CMakeException("Unable to find CMake")
self.trace = CMakeTraceParser(c... | def configure(self, extra_cmake_options: T.List[str]) -> None:
for_machine = MachineChoice.HOST # TODO make parameter
# Find CMake
cmake_exe = CMakeExecutor(self.env, ">=3.7", for_machine)
if not cmake_exe.found():
raise CMakeException("Unable to find CMake")
self.trace = CMakeTraceParser(c... | https://github.com/mesonbuild/meson/issues/6801 | C:\Users\icherepa\Desktop\bgpscanner> meson --buildtype=release ..
The Meson build system
Version: 0.53.2
Source dir: C:\Users\icherepa\Desktop\bgpscanner
Build dir: C:\Users\icherepa\Desktop
Build type: native build
Project name: bgpscanner
Project version: 2.31
C compiler for the host machine: gcc (gcc 6.3.0 "gcc (Mi... | FileNotFoundError |
def pretend_to_be_meson(self) -> CodeBlockNode:
if not self.project_name:
raise CMakeException("CMakeInterpreter was not analysed")
def token(tid: str = "string", val="") -> Token:
return Token(tid, self.subdir, 0, 0, 0, None, val)
def string(value: str) -> StringNode:
return Strin... | def pretend_to_be_meson(self) -> CodeBlockNode:
if not self.project_name:
raise CMakeException("CMakeInterpreter was not analysed")
def token(tid: str = "string", val="") -> Token:
return Token(tid, self.subdir, 0, 0, 0, None, val)
def string(value: str) -> StringNode:
return Strin... | https://github.com/mesonbuild/meson/issues/6801 | C:\Users\icherepa\Desktop\bgpscanner> meson --buildtype=release ..
The Meson build system
Version: 0.53.2
Source dir: C:\Users\icherepa\Desktop\bgpscanner
Build dir: C:\Users\icherepa\Desktop
Build type: native build
Project name: bgpscanner
Project version: 2.31
C compiler for the host machine: gcc (gcc 6.3.0 "gcc (Mi... | FileNotFoundError |
def _setup_cmake_dir(self, cmake_file: str) -> str:
# Setup the CMake build environment and return the "build" directory
build_dir = self._get_build_dir()
# Insert language parameters into the CMakeLists.txt and write new CMakeLists.txt
# Per the warning in pkg_resources, this is *not* a path and os.pa... | def _setup_cmake_dir(self, cmake_file: str) -> str:
# Setup the CMake build environment and return the "build" directory
build_dir = self._get_build_dir()
# Insert language parameters into the CMakeLists.txt and write new CMakeLists.txt
src_cmake = Path(__file__).parent / "data" / cmake_file
cmake_... | https://github.com/mesonbuild/meson/issues/6801 | C:\Users\icherepa\Desktop\bgpscanner> meson --buildtype=release ..
The Meson build system
Version: 0.53.2
Source dir: C:\Users\icherepa\Desktop\bgpscanner
Build dir: C:\Users\icherepa\Desktop
Build type: native build
Project name: bgpscanner
Project version: 2.31
C compiler for the host machine: gcc (gcc 6.3.0 "gcc (Mi... | FileNotFoundError |
def sanitize_dir_option_value(self, prefix: str, option: str, value: Any) -> Any:
"""
If the option is an installation directory option and the value is an
absolute path, check that it resides within prefix and return the value
as a path relative to the prefix.
This way everyone can do f.ex, get_op... | def sanitize_dir_option_value(self, prefix, option, value):
"""
If the option is an installation directory option and the value is an
absolute path, check that it resides within prefix and return the value
as a path relative to the prefix.
This way everyone can do f.ex, get_option('libdir') and be ... | https://github.com/mesonbuild/meson/issues/6395 | $ meson setup build --libdir=E:/Documents/Coding/C/lib
The Meson build system
Version: 0.52.1
Source dir: E:\Documents\Coding\C\meson_test
Build dir: E:\Documents\Coding\C\meson_test\build
Build type: native build
Traceback (most recent call last):
File "C:\Users\<user>\AppData\Roaming\Python\Python38\site-packages\mes... | ValueError |
def generate_single_compile(
self, target, outfile, src, is_generated=False, header_deps=[], order_deps=[]
):
"""
Compiles C/C++, ObjC/ObjC++, Fortran, and D sources
"""
if isinstance(src, str) and src.endswith(".h"):
raise AssertionError("BUG: sources should not contain headers {!r}".format... | def generate_single_compile(
self, target, outfile, src, is_generated=False, header_deps=[], order_deps=[]
):
"""
Compiles C/C++, ObjC/ObjC++, Fortran, and D sources
"""
if isinstance(src, str) and src.endswith(".h"):
raise AssertionError("BUG: sources should not contain headers {!r}".format... | https://github.com/mesonbuild/meson/issues/1348 | The Meson build system
Version: 0.38.0
Source dir: /home/Adama-docs/Adam/MyDocs/praca/IMGW/dev/meson_bug
Build dir: /home/Adama-docs/Adam/MyDocs/praca/IMGW/dev/meson_bug/build
Build type: native build
Project name: simple fortran
Native fortran compiler: gfortran (gcc 5.4.1)
Build machine cpu family: x86_64
Build machi... | FileNotFoundError |
def scan_fortran_module_outputs(self, target):
compiler = None
for lang, c in self.build.compilers.items():
if lang == "fortran":
compiler = c
break
if compiler is None:
self.fortran_deps[target.get_basename()] = {}
return
modre = re.compile(r"\s*module\s+... | def scan_fortran_module_outputs(self, target):
compiler = None
for lang, c in self.build.compilers.items():
if lang == "fortran":
compiler = c
break
if compiler is None:
self.fortran_deps[target.get_basename()] = {}
return
modre = re.compile(r"\s*module\s+... | https://github.com/mesonbuild/meson/issues/1348 | The Meson build system
Version: 0.38.0
Source dir: /home/Adama-docs/Adam/MyDocs/praca/IMGW/dev/meson_bug
Build dir: /home/Adama-docs/Adam/MyDocs/praca/IMGW/dev/meson_bug/build
Build type: native build
Project name: simple fortran
Native fortran compiler: gfortran (gcc 5.4.1)
Build machine cpu family: x86_64
Build machi... | FileNotFoundError |
def __init__(self, subdir, lineno, colno, condition, trueblock, falseblock):
self.subdir = subdir
self.lineno = lineno
self.colno = colno
self.condition = condition
self.trueblock = trueblock
self.falseblock = falseblock
| def __init__(self, lineno, colno, condition, trueblock, falseblock):
self.lineno = lineno
self.colno = colno
self.condition = condition
self.trueblock = trueblock
self.falseblock = falseblock
| https://github.com/mesonbuild/meson/issues/2404 | Traceback (most recent call last):
File "/home/adrian/.local/lib/python3.5/site-packages/mesonbuild/mesonmain.py", line 353, in run
app.generate()
File "/home/adrian/.local/lib/python3.5/site-packages/mesonbuild/mesonmain.py", line 148, in generate
self._generate(env)
File "/home/adrian/.local/lib/python3.5/site-packag... | AttributeError |
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