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coconut_java2006

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}
private void buildGUI() { Container container = getContentPane(); layer = new JLayeredPane(); canvas = new ImageCanvas(this); layer.add(canvas, new Integer(0)); scrollPane = new JScrollPane(layer); container.add(toolBar, BorderLayout.NORTH); container.add(buildM...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/a81a5a58f8e54d006d057455465766c8d3d72998/ViewerUIF.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/ViewerUIF.java
{ JPanel p = new JPanel(); p.setLayout(new BoxLayout(p, BoxLayout.X_AXIS)); JLabel label = new JLabel("Z "); JPanel pz = new JPanel(); pz.setLayout(new BoxLayout(pz, BoxLayout.Y_AXIS)); pz.add(label); pz.add(zSlider);
{ JPanel p = new JPanel(); p.setLayout(new BoxLayout(p, BoxLayout.X_AXIS)); JLabel label = new JLabel("Z "); JPanel pz = new JPanel(); pz.setLayout(new BoxLayout(pz, BoxLayout.Y_AXIS)); pz.add(label); pz.add(zSlider);
private JPanel buildMain() { JPanel p = new JPanel(); p.setLayout(new BoxLayout(p, BoxLayout.X_AXIS)); //z-slider JLabel label = new JLabel("Z "); JPanel pz = new JPanel(); pz.setLayout(new BoxLayout(pz, BoxLayout.Y_AXIS)); pz.add(label); pz.add(zSlider); //t-slider label = new JLabel("T "); ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/a81a5a58f8e54d006d057455465766c8d3d72998/ViewerUIF.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/ViewerUIF.java
return p; }
return p; }
private JPanel buildMain() { JPanel p = new JPanel(); p.setLayout(new BoxLayout(p, BoxLayout.X_AXIS)); //z-slider JLabel label = new JLabel("Z "); JPanel pz = new JPanel(); pz.setLayout(new BoxLayout(pz, BoxLayout.Y_AXIS)); pz.add(label); pz.add(zSlider); //t-slider label = new JLabel("T "); ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/a81a5a58f8e54d006d057455465766c8d3d72998/ViewerUIF.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/ViewerUIF.java
{ configureQuickLaunchBtn(im.getIcon(IconManager.VIEWER), "Bring up the Viewer."); configureWinMenuEntry("Viewer ", im.getIcon(IconManager.VIEWER)); }
{ configureQuickLaunchBtn(im.getIcon(IconManager.VIEWER), "Bring up the Viewer."); configureWinMenuEntry("Viewer ", im.getIcon(IconManager.VIEWER)); }
private void configureDisplayButtons() { configureQuickLaunchBtn(im.getIcon(IconManager.VIEWER), "Bring up the Viewer."); configureWinMenuEntry("Viewer ", im.getIcon(IconManager.VIEWER)); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/a81a5a58f8e54d006d057455465766c8d3d72998/ViewerUIF.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/ViewerUIF.java
{ JMenu menu = new JMenu("Controls"); JMenuItem menuItem = new JMenuItem("Rendering", im.getIcon(IconManager.RENDER)); control.attachItemListener(menuItem, ViewerCtrl.RENDERING); menu.add(menuItem); menuItem = new JMenuItem("Inspector", im.getIcon(IconManager.INSPECTOR)); control.attachItemListener(menuItem, ViewerCtrl...
{ JMenu menu = new JMenu("Controls"); JMenuItem menuItem = new JMenuItem("Rendering", im.getIcon(IconManager.RENDER)); control.attachItemListener(menuItem, ViewerCtrl.RENDERING); menu.add(menuItem); menuItem = new JMenuItem("ROI", im.getIcon(IconManager.ROI)); control.attachItemListener(menuItem, ViewerCtrl.ROI); menu....
private JMenu createControlsMenu(int maxZ, int maxT) { JMenu menu = new JMenu("Controls"); JMenuItem menuItem = new JMenuItem("Rendering", im.getIcon(IconManager.RENDER)); control.attachItemListener(menuItem, ViewerCtrl.RENDERING); menu.add(menuItem); menuItem = new JMenuItem("Inspector", im.ge...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/a81a5a58f8e54d006d057455465766c8d3d72998/ViewerUIF.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/ViewerUIF.java
menu.add(movieItem); menuItem = new JMenuItem("SAVE AS...", im.getIcon(IconManager.SAVEAS)); control.attachItemListener(menuItem, ViewerCtrl.SAVE_AS); menu.add(menuItem);
menu.add(movieItem); menuItem = new JMenuItem("SAVE AS...", im.getIcon(IconManager.SAVEAS)); control.attachItemListener(menuItem, ViewerCtrl.SAVE_AS); menu.add(menuItem);
private JMenu createControlsMenu(int maxZ, int maxT) { JMenu menu = new JMenu("Controls"); JMenuItem menuItem = new JMenuItem("Rendering", im.getIcon(IconManager.RENDER)); control.attachItemListener(menuItem, ViewerCtrl.RENDERING); menu.add(menuItem); menuItem = new JMenuItem("Inspector", im.ge...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/a81a5a58f8e54d006d057455465766c8d3d72998/ViewerUIF.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/ViewerUIF.java
return menu; }
return menu; }
private JMenu createControlsMenu(int maxZ, int maxT) { JMenu menu = new JMenu("Controls"); JMenuItem menuItem = new JMenuItem("Rendering", im.getIcon(IconManager.RENDER)); control.attachItemListener(menuItem, ViewerCtrl.RENDERING); menu.add(menuItem); menuItem = new JMenuItem("Inspector", im.ge...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/a81a5a58f8e54d006d057455465766c8d3d72998/ViewerUIF.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/ViewerUIF.java
{ JMenuBar menuBar = new JMenuBar(); menuBar.add(createControlsMenu(maxZ, maxT)); return menuBar; }
{ JMenuBar menuBar = new JMenuBar(); menuBar.add(createControlsMenu(maxZ, maxT)); return menuBar; }
private JMenuBar createMenuBar(int maxZ, int maxT) { JMenuBar menuBar = new JMenuBar(); menuBar.add(createControlsMenu(maxZ, maxT)); return menuBar; }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/a81a5a58f8e54d006d057455465766c8d3d72998/ViewerUIF.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/ViewerUIF.java
{ tSlider = new JSlider(JSlider.VERTICAL, 0, maxT, t); String s = "Move the slider to navigate across time."; tSlider.setToolTipText(UIUtilities.formatToolTipText(s)); tSlider.setEnabled(maxT != 0); zSlider = new JSlider(JSlider.VERTICAL, 0, maxZ, z); s = "Move the slider to navigate across Z stack."; zSlider.setToolTi...
{ tSlider = new JSlider(JSlider.VERTICAL, 0, maxT, t); String s = "Move the slider to navigate across time."; tSlider.setToolTipText(UIUtilities.formatToolTipText(s)); tSlider.setEnabled(maxT != 0); zSlider = new JSlider(JSlider.VERTICAL, 0, maxZ, z); s = "Move the slider to navigate across Z stack."; zSlider.setToolTi...
private void initSliders(int maxT, int t, int maxZ, int z) { tSlider = new JSlider(JSlider.VERTICAL, 0, maxT, t); String s = "Move the slider to navigate across time."; tSlider.setToolTipText(UIUtilities.formatToolTipText(s)); tSlider.setEnabled(maxT != 0); zSlider = new JSlider(JSlider.VERTICAL, 0, maxZ, z); s ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/a81a5a58f8e54d006d057455465766c8d3d72998/ViewerUIF.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/ViewerUIF.java
{ tSlider.removeChangeListener(control); tSlider.setMaximum(maxT); tSlider.setValue(t); tSlider.addChangeListener(control); zSlider.removeChangeListener(control); zSlider.setMaximum(maxZ); zSlider.setValue(z); zSlider.addChangeListener(control); zSlider.setEnabled(maxZ != 0); tSlider.setEnabled(maxT != 0); }
{ tSlider.removeChangeListener(control); tSlider.setMaximum(maxT); tSlider.setValue(t); tSlider.addChangeListener(control); zSlider.removeChangeListener(control); zSlider.setMaximum(maxZ); zSlider.setValue(z); zSlider.addChangeListener(control); zSlider.setEnabled(maxZ != 0); tSlider.setEnabled(maxT != 0); }
private void resetSliders(int maxT, int t, int maxZ, int z) { tSlider.removeChangeListener(control); tSlider.setMaximum(maxT); tSlider.setValue(t); tSlider.addChangeListener(control); zSlider.removeChangeListener(control); zSlider.setMaximum(maxZ); zSlider.setValue(z); zSlider.addChangeListener(control); zSli...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/a81a5a58f8e54d006d057455465766c8d3d72998/ViewerUIF.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/ViewerUIF.java
{ ToolBarManager tbm = toolBar.getManager(); tbm.onTChange(t); tbm.onZChange(z); int maxZ = sizeZ-1; int maxT = sizeT-1; tbm.setMaxT(maxT); tbm.setMaxZ(maxZ); toolBar.getZLabel().setText("/"+maxZ); toolBar.getTLabel().setText("/"+maxT); resetSliders(maxT, t, maxZ, z); boolean bT = false, bZ = false; if (maxT != 0) bT ...
{ ToolBarManager tbm = toolBar.getManager(); tbm.onTChange(t); tbm.onZChange(z); int maxZ = sizeZ-1; int maxT = sizeT-1; tbm.setMaxT(maxT); tbm.setMaxZ(maxZ); toolBar.getZLabel().setText("/"+maxZ); toolBar.getTLabel().setText("/"+maxT); resetSliders(maxT, t, maxZ, z); boolean bT = false, bZ = false; if (maxT != 0) bT ...
void setDefaultZT(int t, int z, int sizeT, int sizeZ) { ToolBarManager tbm = toolBar.getManager(); tbm.onTChange(t); tbm.onZChange(z); int maxZ = sizeZ-1; int maxT = sizeT-1; tbm.setMaxT(maxT); tbm.setMaxZ(maxZ); toolBar.getZLabel().setText("/"+maxZ); toolBar.getTLabel().setText("/"+maxT); resetSliders(maxT,...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/a81a5a58f8e54d006d057455465766c8d3d72998/ViewerUIF.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/ViewerUIF.java
}
}
void setDefaultZT(int t, int z, int sizeT, int sizeZ) { ToolBarManager tbm = toolBar.getManager(); tbm.onTChange(t); tbm.onZChange(z); int maxZ = sizeZ-1; int maxT = sizeT-1; tbm.setMaxT(maxT); tbm.setMaxZ(maxZ); toolBar.getZLabel().setText("/"+maxZ); toolBar.getTLabel().setText("/"+maxT); resetSliders(maxT,...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/a81a5a58f8e54d006d057455465766c8d3d72998/ViewerUIF.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/ViewerUIF.java
if (!active) { int w = img.getWidth()+2*START; int h = img.getHeight()+2*START;
if (!active) { int w = img.getWidth()+2*START, h = img.getHeight()+2*START;
void setImage(BufferedImage img) { if (!active) { int w = img.getWidth()+2*START; int h = img.getHeight()+2*START; setSizePaintedComponents(new Dimension(w, h)); setWindowSize(img.getWidth()+4*START, img.getHeight()+4*START); } canvas.paintIma...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/a81a5a58f8e54d006d057455465766c8d3d72998/ViewerUIF.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/ViewerUIF.java
setWindowSize(img.getWidth()+4*START, img.getHeight()+4*START); }
w += 2*START; h += 2*START; setWindowSize(w, h); }
void setImage(BufferedImage img) { if (!active) { int w = img.getWidth()+2*START; int h = img.getHeight()+2*START; setSizePaintedComponents(new Dimension(w, h)); setWindowSize(img.getWidth()+4*START, img.getHeight()+4*START); } canvas.paintIma...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/a81a5a58f8e54d006d057455465766c8d3d72998/ViewerUIF.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/ViewerUIF.java
{ Dimension screenSize = Toolkit.getDefaultToolkit().getScreenSize(); int width = 7*(screenSize.width/10); int height = 7*(screenSize.height/10); if (w > width) w = width; if (h > height) h = height; setSize(w, h); }
{ Dimension screenSize = Toolkit.getDefaultToolkit().getScreenSize(); int width = 7*(screenSize.width/10); int height = 7*(screenSize.height/10); if (w > width) w = width; if (h > height) h = height; setSize(w, h); }
private void setWindowSize(int w, int h) { Dimension screenSize = Toolkit.getDefaultToolkit().getScreenSize(); int width = 7*(screenSize.width/10); int height = 7*(screenSize.height/10); if (w > width) w = width; if (h > height) h = height; setSize(w, h); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/a81a5a58f8e54d006d057455465766c8d3d72998/ViewerUIF.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/ViewerUIF.java
public ImageInspector(ViewerCtrl control, ImageCanvas canvas, double magFactor)
public ImageInspector(ViewerCtrl control, ImageCanvas canvas, double magFactor, int w, int h)
public ImageInspector(ViewerCtrl control, ImageCanvas canvas, double magFactor) { super(control.getReferenceFrame(), "Image inspector"); init(control, canvas, magFactor); setJMenuBar(menuBar); buildGUI(); pack(); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/8846f7da5fbaf4d3fb83aa43b5616bcd13483654/ImageInspector.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/transform/ImageInspector.java
init(control, canvas, magFactor);
init(control, canvas, magFactor, w, h);
public ImageInspector(ViewerCtrl control, ImageCanvas canvas, double magFactor) { super(control.getReferenceFrame(), "Image inspector"); init(control, canvas, magFactor); setJMenuBar(menuBar); buildGUI(); pack(); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/8846f7da5fbaf4d3fb83aa43b5616bcd13483654/ImageInspector.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/transform/ImageInspector.java
private void init(ViewerCtrl control, ImageCanvas canvas, double magFactor)
private void init(ViewerCtrl control, ImageCanvas canvas, double magFactor, int w, int h)
private void init(ViewerCtrl control, ImageCanvas canvas, double magFactor) { Registry reg = control.getRegistry(); manager = new ImageInspectorManager(this, control, magFactor); BufferedImage img = control.getBufferedImage(); manager.setImageDimension(img.getWidth(), img.getHeight())...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/8846f7da5fbaf4d3fb83aa43b5616bcd13483654/ImageInspector.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/transform/ImageInspector.java
toolBar = new ToolBar(reg, manager, magFactor);
toolBar = new ToolBar(reg, manager, magFactor, w, h);
private void init(ViewerCtrl control, ImageCanvas canvas, double magFactor) { Registry reg = control.getRegistry(); manager = new ImageInspectorManager(this, control, magFactor); BufferedImage img = control.getBufferedImage(); manager.setImageDimension(img.getWidth(), img.getHeight())...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/8846f7da5fbaf4d3fb83aa43b5616bcd13483654/ImageInspector.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/transform/ImageInspector.java
attachListener();
public ImageInspectorManager(ImageInspector view) { this.view = view; curZoomLevel = ZOOM_DEFAULT; }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/020251919a9bc041ddec075006ba48f2bcfddd48/ImageInspectorManager.java/buggy/SRC/org/openmicroscopy/shoola/agents/viewer/transform/ImageInspectorManager.java
{ zoomMenu = new ZoomMenu(manager, magFactor); add(zoomMenu); }
{ zoomMenu = new ZoomMenu(manager, magFactor); add(zoomMenu); add(new FilterMenu(manager)); }
MenuBar(ImageInspectorManager manager, double magFactor) { zoomMenu = new ZoomMenu(manager, magFactor); add(zoomMenu); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/a2f4cd0a125d188c1e246cd85608e59a51e3d85c/MenuBar.java/buggy/SRC/org/openmicroscopy/shoola/agents/viewer/transform/MenuBar.java
double magFactor)
double magFactor, int w, int h)
public ToolBar(Registry registry, ImageInspectorManager manager, double magFactor) { setLayout(new BoxLayout(this, BoxLayout.Y_AXIS)); putClientProperty("JToolBar.isRollover", new Boolean(true)); zoomBar = new ZoomBar(registry, manager, magFactor); lensBar = new Le...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/8846f7da5fbaf4d3fb83aa43b5616bcd13483654/ToolBar.java/buggy/SRC/org/openmicroscopy/shoola/agents/viewer/transform/ToolBar.java
lensBar = new LensBar(registry, manager);
lensBar = new LensBar(registry, manager, w, h);
public ToolBar(Registry registry, ImageInspectorManager manager, double magFactor) { setLayout(new BoxLayout(this, BoxLayout.Y_AXIS)); putClientProperty("JToolBar.isRollover", new Boolean(true)); zoomBar = new ZoomBar(registry, manager, magFactor); lensBar = new Le...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/8846f7da5fbaf4d3fb83aa43b5616bcd13483654/ToolBar.java/buggy/SRC/org/openmicroscopy/shoola/agents/viewer/transform/ToolBar.java
int n = Integer.parseInt(args[0]);
public static void main(String args[]) throws IOException { //@START int n = Integer.parseInt(args[0]); for (int i=0; i<n; i++) { some_function(i); } System.out.println("Exceptions: HI=" + Hi + " / LO=" + Lo); //@END }
53330 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/53330/eb6c850277407b38bcaefb81155941da0f27b849/except.java/buggy/tests/shootout/java-start/except.java
if (method.getName().equals("toString") && method.getParameterTypes().length == 0) { return proxy.getClass().getName(); } else if (method.getName().equals("hashCode") && method.getParameterTypes().length == 0) { return new Integer(proxy.getClass().hashCode()); } else if (method.getName().equals("equals") && method.getP...
public static IRubyObject new_proxy_instance(final IRubyObject recv, IRubyObject[] args) { if (args.length < 1) { throw new ArgumentError(recv.getRuntime(), "wrong # of arguments(" + args.length + " for 1)"); } final RubyProc proc = args[args.length - 1] instanceof RubyProc ? (RubyPr...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/a427f315ae3c71573e36810225bf3a9c51df15d5/Java.java/buggy/src/org/jruby/javasupport/Java.java
if (method.getName().equals("toString") && method.getParameterTypes().length == 0) { return proxy.getClass().getName(); } else if (method.getName().equals("hashCode") && method.getParameterTypes().length == 0) { return new Integer(proxy.getClass().hashCode()); } else if (method.getName().equals("equals") && method.getP...
public Object invoke(Object proxy, Method method, Object[] args) throws Throwable { int length = args == null ? 0 : args.length; IRubyObject rubyArgs[] = new IRubyObject[length + 2]; rubyArgs[0] = JavaObject.wrap(recv.getRuntime(), proxy); rubyArgs...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/a427f315ae3c71573e36810225bf3a9c51df15d5/Java.java/buggy/src/org/jruby/javasupport/Java.java
System.arraycopy(super.toArray(), position, array, 0, len);
System.arraycopy(delegate.toArray(), position, array, 0, len);
public Object[] toArray() { int len = size(); Object[] array = new Object[len]; System.arraycopy(super.toArray(), position, array, 0, len); return array; }
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/d31a76ee29d5978a9bec41e3ac9134cee024bcab/DefaultPointer.java/buggy/org/jruby/util/DefaultPointer.java
module.defineModuleFunction("abort", callbackFactory.getOptSingletonMethod("abort"));
public static RubyModule createKernelModule(IRuby runtime) { RubyModule module = runtime.defineModule("Kernel"); CallbackFactory callbackFactory = runtime.callbackFactory(RubyKernel.class); CallbackFactory objectCallbackFactory = runtime.callbackFactory(RubyObject.class); module.defineMo...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/4312f891f233f275731e5d8afa842df31058fc8e/RubyKernel.java/clean/src/org/jruby/RubyKernel.java
Header.print(System.out); System.out.println("instrumenting " + filenames.length + " " + (filenames.length == 1 ? "class" : "classes") + (toDir != null ? " to " + toDir : ""));
private void addFilenames(String[] filenames) { if (filenames.length == 0) { return; } for (int i = 0; i < filenames.length; i++) { getProject().log("Adding " + filenames[i] + " to list", Project.MSG_VERBOSE); addArg(filenames[i]); } Header.print(System.out); System.out.println("instrumenting " + fil...
50197 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50197/8d76b07e3d230fcd0d3b233e7ffc80df6ca3ec82/InstrumentTask.java/buggy/cobertura/src/net/sourceforge/cobertura/ant/InstrumentTask.java
Set filenames = new HashSet();
int numberOfClasses = 0;
private void handleFilesets() { Set filenames = new HashSet(); Iterator iter = fileSets.iterator(); while (iter.hasNext()) { FileSet fileSet = (FileSet)iter.next(); addArg("--basedir"); addArg(baseDir(fileSet)); filenames.addAll(Arrays.asList(getFilenames(fileSet))); } addFilenames((String[])filenames.to...
50197 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50197/8d76b07e3d230fcd0d3b233e7ffc80df6ca3ec82/InstrumentTask.java/buggy/cobertura/src/net/sourceforge/cobertura/ant/InstrumentTask.java
filenames.addAll(Arrays.asList(getFilenames(fileSet)));
String[] fileNames = getFilenames(fileSet); numberOfClasses += fileNames.length; addFilenames(getFilenames(fileSet));
private void handleFilesets() { Set filenames = new HashSet(); Iterator iter = fileSets.iterator(); while (iter.hasNext()) { FileSet fileSet = (FileSet)iter.next(); addArg("--basedir"); addArg(baseDir(fileSet)); filenames.addAll(Arrays.asList(getFilenames(fileSet))); } addFilenames((String[])filenames.to...
50197 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50197/8d76b07e3d230fcd0d3b233e7ffc80df6ca3ec82/InstrumentTask.java/buggy/cobertura/src/net/sourceforge/cobertura/ant/InstrumentTask.java
addFilenames((String[])filenames.toArray(new String[filenames.size()]));
Header.print(System.out); System.out.println("instrumenting " + numberOfClasses + " " + (numberOfClasses == 1 ? "class" : "classes") + (toDir != null ? " to " + toDir : ""));
private void handleFilesets() { Set filenames = new HashSet(); Iterator iter = fileSets.iterator(); while (iter.hasNext()) { FileSet fileSet = (FileSet)iter.next(); addArg("--basedir"); addArg(baseDir(fileSet)); filenames.addAll(Arrays.asList(getFilenames(fileSet))); } addFilenames((String[])filenames.to...
50197 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50197/8d76b07e3d230fcd0d3b233e7ffc80df6ca3ec82/InstrumentTask.java/buggy/cobertura/src/net/sourceforge/cobertura/ant/InstrumentTask.java
delegate.commit();
localUpdate.commit();
public void commit() { delegate.commit(); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/dc8dde051a1e2b716514b3964c9222ce006ebea9/UpdateBean.java/buggy/components/ejb/src/ome/ro/ejb/UpdateBean.java
delegate = (LocalUpdate) applicationContext.getBean( IUpdate.class.getName());
public void create() { super.create(); delegate = (LocalUpdate) applicationContext.getBean( IUpdate.class.getName()); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/dc8dde051a1e2b716514b3964c9222ce006ebea9/UpdateBean.java/buggy/components/ejb/src/ome/ro/ejb/UpdateBean.java
delegate.deleteObject(row);
localUpdate.deleteObject(row);
public void deleteObject(IObject row) { delegate.deleteObject(row); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/dc8dde051a1e2b716514b3964c9222ce006ebea9/UpdateBean.java/buggy/components/ejb/src/ome/ro/ejb/UpdateBean.java
delegate = null;
localUpdate = null;
public void destroy() { delegate = null; super.destroy(); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/dc8dde051a1e2b716514b3964c9222ce006ebea9/UpdateBean.java/buggy/components/ejb/src/ome/ro/ejb/UpdateBean.java
delegate.flush();
localUpdate.flush();
public void flush() { delegate.flush(); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/dc8dde051a1e2b716514b3964c9222ce006ebea9/UpdateBean.java/buggy/components/ejb/src/ome/ro/ejb/UpdateBean.java
return wrap( context, "&updateService" );
return wrap( context, IUpdate.class );
public Object invoke( InvocationContext context ) throws Exception { return wrap( context, "&updateService" ); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/dc8dde051a1e2b716514b3964c9222ce006ebea9/UpdateBean.java/buggy/components/ejb/src/ome/ro/ejb/UpdateBean.java
delegate.rollback();
localUpdate.rollback();
public void rollback() { delegate.rollback(); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/dc8dde051a1e2b716514b3964c9222ce006ebea9/UpdateBean.java/buggy/components/ejb/src/ome/ro/ejb/UpdateBean.java
return delegate.saveAndReturnArray(graph);
return localUpdate.saveAndReturnArray(graph);
public IObject[] saveAndReturnArray(IObject[] graph) { return delegate.saveAndReturnArray(graph); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/dc8dde051a1e2b716514b3964c9222ce006ebea9/UpdateBean.java/buggy/components/ejb/src/ome/ro/ejb/UpdateBean.java
return delegate.saveAndReturnCollection(graph);
return localUpdate.saveAndReturnCollection(graph);
public Collection saveAndReturnCollection(Collection graph) { return delegate.saveAndReturnCollection(graph); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/dc8dde051a1e2b716514b3964c9222ce006ebea9/UpdateBean.java/buggy/components/ejb/src/ome/ro/ejb/UpdateBean.java
return delegate.saveAndReturnMap(map);
return localUpdate.saveAndReturnMap(map);
public Map saveAndReturnMap(Map map) { return delegate.saveAndReturnMap(map); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/dc8dde051a1e2b716514b3964c9222ce006ebea9/UpdateBean.java/buggy/components/ejb/src/ome/ro/ejb/UpdateBean.java
return delegate.saveAndReturnObject(graph);
return localUpdate.saveAndReturnObject(graph);
public IObject saveAndReturnObject(IObject graph) { return delegate.saveAndReturnObject(graph); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/dc8dde051a1e2b716514b3964c9222ce006ebea9/UpdateBean.java/buggy/components/ejb/src/ome/ro/ejb/UpdateBean.java
delegate.saveArray(arg0);
localUpdate.saveArray(arg0);
public void saveArray(IObject[] arg0) { delegate.saveArray(arg0); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/dc8dde051a1e2b716514b3964c9222ce006ebea9/UpdateBean.java/buggy/components/ejb/src/ome/ro/ejb/UpdateBean.java
delegate.saveCollection(arg0);
localUpdate.saveCollection(arg0);
public void saveCollection(Collection arg0) { delegate.saveCollection(arg0); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/dc8dde051a1e2b716514b3964c9222ce006ebea9/UpdateBean.java/buggy/components/ejb/src/ome/ro/ejb/UpdateBean.java
delegate.saveMap(arg0);
localUpdate.saveMap(arg0);
public void saveMap(Map arg0) { delegate.saveMap(arg0); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/dc8dde051a1e2b716514b3964c9222ce006ebea9/UpdateBean.java/buggy/components/ejb/src/ome/ro/ejb/UpdateBean.java
delegate.saveObject(graph);
localUpdate.saveObject(graph);
public void saveObject(IObject graph) { delegate.saveObject(graph); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/dc8dde051a1e2b716514b3964c9222ce006ebea9/UpdateBean.java/buggy/components/ejb/src/ome/ro/ejb/UpdateBean.java
recv.getRuntime().parse(content.getValue(), filename.getValue())));
recv.getRuntime().parse(content.toString(), filename.toString())));
public static IRubyObject parse(IRubyObject recv, IRubyObject arg1, IRubyObject arg2) { RubyString content = arg1.convertToString(); RubyString filename = arg2.convertToString(); return Java.java_to_ruby(recv, JavaObject.wrap(recv.getRuntime(), recv.getRuntime().parse(content.getVal...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/9f2efc63a858fa0507245b207025eab027840a04/RubyJRuby.java/clean/src/org/jruby/RubyJRuby.java
addTools(tools);
registerTools(tools);
public WebContext(final Broker broker) { super(broker); try { String tools = (String) broker.getValue("config","TemplateTools"); addTools(tools); } catch (InvalidTypeException it) { _log.exception(it); _log.error("config type not registered with broker!"); } cat...
52513 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52513/78a66b349748346624878ff04bb72f314bdac97c/WebContext.java/clean/webmacro/src/org/webmacro/servlet/WebContext.java
interpreter.getRubyFrame().push();
getRuby().getRubyFrame().push();
public RubyObject call0(RubyObject recv, RubyId id, RubyObject[] args, NODE body, boolean noSuper) { // ... RubyInterpreter interpreter = getRuby().getInterpreter(); interpreter.getRubyFrame().push(); // HACK +++ interpreter.getRubyIter().push(Iter.ITER_NOT...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/cf644c556d410c47305ebeba5728efa25f7756dc/RubyModule.java/buggy/org/jruby/RubyModule.java
interpreter.getRubyFrame().setLastFunc(id); interpreter.getRubyFrame().setLastClass(noSuper ? null : this); interpreter.getRubyFrame().setSelf(recv); interpreter.getRubyFrame().setArgs(new ShiftableList(args));
getRuby().getRubyFrame().setLastFunc(id); getRuby().getRubyFrame().setLastClass(noSuper ? null : this); getRuby().getRubyFrame().setSelf(recv); getRuby().getRubyFrame().setArgs(new ShiftableList(args));
public RubyObject call0(RubyObject recv, RubyId id, RubyObject[] args, NODE body, boolean noSuper) { // ... RubyInterpreter interpreter = getRuby().getInterpreter(); interpreter.getRubyFrame().push(); // HACK +++ interpreter.getRubyIter().push(Iter.ITER_NOT...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/cf644c556d410c47305ebeba5728efa25f7756dc/RubyModule.java/buggy/org/jruby/RubyModule.java
savedCref = interpreter.ruby_cref; interpreter.ruby_cref = (NODE)body.nd_rval(); interpreter.getRubyFrame().setCbase(body.nd_rval());
savedCref = getRuby().getRubyCRef(); getRuby().setRubyCRef((NODE)body.nd_rval()); getRuby().getRubyFrame().setCbase(body.nd_rval());
public RubyObject call0(RubyObject recv, RubyId id, RubyObject[] args, NODE body, boolean noSuper) { // ... RubyInterpreter interpreter = getRuby().getInterpreter(); interpreter.getRubyFrame().push(); // HACK +++ interpreter.getRubyIter().push(Iter.ITER_NOT...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/cf644c556d410c47305ebeba5728efa25f7756dc/RubyModule.java/buggy/org/jruby/RubyModule.java
interpreter.getRubyFrame().setArgs(localVarsList != null ? localVarsList.getList(2) : null);
getRuby().getRubyFrame().setArgs(localVarsList != null ? localVarsList.getList(2) : null);
public RubyObject call0(RubyObject recv, RubyId id, RubyObject[] args, NODE body, boolean noSuper) { // ... RubyInterpreter interpreter = getRuby().getInterpreter(); interpreter.getRubyFrame().push(); // HACK +++ interpreter.getRubyIter().push(Iter.ITER_NOT...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/cf644c556d410c47305ebeba5728efa25f7756dc/RubyModule.java/buggy/org/jruby/RubyModule.java
interpreter.ruby_cref = savedCref;
getRuby().setRubyCRef(savedCref);
public RubyObject call0(RubyObject recv, RubyId id, RubyObject[] args, NODE body, boolean noSuper) { // ... RubyInterpreter interpreter = getRuby().getInterpreter(); interpreter.getRubyFrame().push(); // HACK +++ interpreter.getRubyIter().push(Iter.ITER_NOT...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/cf644c556d410c47305ebeba5728efa25f7756dc/RubyModule.java/buggy/org/jruby/RubyModule.java
interpreter.getRubyFrame().pop();
getRuby().getRubyFrame().pop();
public RubyObject call0(RubyObject recv, RubyId id, RubyObject[] args, NODE body, boolean noSuper) { // ... RubyInterpreter interpreter = getRuby().getInterpreter(); interpreter.getRubyFrame().push(); // HACK +++ interpreter.getRubyIter().push(Iter.ITER_NOT...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/cf644c556d410c47305ebeba5728efa25f7756dc/RubyModule.java/buggy/org/jruby/RubyModule.java
public ShiftableList(Object[] args) { if (args == null) { this.delegate = new ArrayList(); } else { this.delegate = new ArrayList(args.length); delegate.addAll(Arrays.asList(args)); }
public ShiftableList(List delegate) { this.delegate = delegate;
public ShiftableList(Object[] args) { if (args == null) { this.delegate = new ArrayList(); } else { this.delegate = new ArrayList(args.length); delegate.addAll(Arrays.asList(args)); } }
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/59743974f1f8d5a50153b05647dac2d75d510976/ShiftableList.java/buggy/org/jruby/util/ShiftableList.java
NODE body = ruby_class.searchMethod((RubyId)node.nd_mid()); RubyObject origin = ruby_class.getMethodOrigin((RubyId)node.nd_mid());
SearchMethodResult smr = ruby_class.searchMethod((RubyId)node.nd_mid()); NODE body = smr.getBody(); RubyObject origin = smr.getOrigin();
public RubyObject eval(RubyObject self, NODE n) { NODE node = n; RubyBoolean cond = null; RubyObject[] args = null; RubyObject value = null; RubyObject result = null; RubyModule rubyClass = null; // int state; // RubyOriginalMethods rom = getRu...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/03950522a75c28f406bd4cb011cb1916a662366d/RubyInterpreter.java/buggy/org/jruby/interpreter/RubyInterpreter.java
copy.setExpanded(this.isExpanded());
public TreeImageDisplay copy() { TreeImageNode copy = new TreeImageNode(this.getUserObject()); copy.setHighLight(this.getHighLight()); copy.setToolTip(this.getToolTip()); return copy; }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/e14deebd64382fe7de32f39ea661a766a7294394/TreeImageNode.java/clean/SRC/org/openmicroscopy/shoola/agents/treeviewer/browser/TreeImageNode.java
label = new JLabel(" Resolution");
label = new JLabel(" Bit depth");
private void buildGUI() { setBorder(BorderFactory.createEmptyBorder(5, 10, 5, 10)); GridBagLayout gridbag = new GridBagLayout(); setLayout(gridbag); GridBagConstraints c = new GridBagConstraints(); JLabel label = new JLabel(" Wavelength"); c.ipadx = RenderingAgt.H_SP...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ea83547fecdb5ee5f6f41a09b5e32cfa9dc22b62/DomainPane.java/buggy/SRC/org/openmicroscopy/shoola/agents/rnd/pane/DomainPane.java
return "AnalysisChainExecution"+(analysisChainExecutionId==null ? ":Hash"+this.hashCode() : ":"+analysisChainExecutionId);
return "AnalysisChainExecution"+(analysisChainExecutionId==null ? ":Hash_"+this.hashCode() : ":Id_"+analysisChainExecutionId);
public String toString(){ return "AnalysisChainExecution"+(analysisChainExecutionId==null ? ":Hash"+this.hashCode() : ":"+analysisChainExecutionId); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/51a3c546dfc7a7a98b29771a459df19094fc5b51/AnalysisChainExecution.java/clean/components/common/src/ome/model/AnalysisChainExecution.java
public void fileOpen(Event e) { FileDialog fileDialog = new FileDialog(dd.getShell(), SWT.OPEN); String filePath = fileDialog.open(); if (filePath != null) { File file = new File(filePath); dd.getTree().loadTree(dd.getDocument().loadNotes(file)); dd.getShell().setText(file.getName() + " - Koala Notes"); } ...
57508 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57508/18ce9cf33f3e06fda4addd57f5ae5c9423a990fb/MainMenuController.java/buggy/trunk/src/de/berlios/koalanotes/controllers/MainMenuController.java
updateNotesFromOpenNoteTabs();
dd.getTabFolder().saveNoteTabs();
public void fileSave(Event e) { updateNotesFromOpenNoteTabs(); dd.getDocument().saveNotes(); }
57508 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57508/18ce9cf33f3e06fda4addd57f5ae5c9423a990fb/MainMenuController.java/buggy/trunk/src/de/berlios/koalanotes/controllers/MainMenuController.java
updateNotesFromOpenNoteTabs();
dd.getTabFolder().saveNoteTabs();
public void fileSaveAs(Event e) { FileDialog fileDialog = new FileDialog(dd.getShell(), SWT.SAVE); String filePath = fileDialog.open(); if (filePath != null) { File file = new File(filePath); updateNotesFromOpenNoteTabs(); dd.getDocument().saveNotes(file); dd.getShell().setText(file.getName() + " - Koala No...
57508 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57508/18ce9cf33f3e06fda4addd57f5ae5c9423a990fb/MainMenuController.java/buggy/trunk/src/de/berlios/koalanotes/controllers/MainMenuController.java
public Note loadNotes(File file) { this.file = file; return loadNotes();
public Note loadNotes() { org.jdom.Document jdomDocument = null; try { jdomDocument = new SAXBuilder().build(file); } catch (IOException ioex) { throw new KoalaException("Koala Notes could not read file '" + file.getName() + "'.", ioex); } catch (JDOMException jdomex) { throw new KoalaException("Koala Notes could not b...
public Note loadNotes(File file) { this.file = file; return loadNotes(); }
57508 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/57508/3a42882d7687c939a3d79fde4e95147320c11b2c/Document.java/buggy/trunk/src/de/berlios/koalanotes/data/Document.java
int index = -1;
public void actionPerformed(ActionEvent e) { int index = -1; try { index = Integer.parseInt(e.getActionCommand()); switch (index) { case PLAY_CMD: handlePlay(); break; case PAUSE_CMD: handlePause(); break; ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ba2070eeb46c459cbb8ad43439d3f9ab12cf63e3/ControlsPaneMng.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/movie/pane/ControlsPaneMng.java
index = Integer.parseInt(e.getActionCommand());
int index = Integer.parseInt(e.getActionCommand());
public void actionPerformed(ActionEvent e) { int index = -1; try { index = Integer.parseInt(e.getActionCommand()); switch (index) { case PLAY_CMD: handlePlay(); break; case PAUSE_CMD: handlePause(); break; ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ba2070eeb46c459cbb8ad43439d3f9ab12cf63e3/ControlsPaneMng.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/movie/pane/ControlsPaneMng.java
JComboBox box = (JComboBox) e.getSource(); playerUIMng.setMovieType(box.getSelectedIndex()); break;
playerUIMng.setMovieType( ((JComboBox) e.getSource()).getSelectedIndex()); break;
public void actionPerformed(ActionEvent e) { int index = -1; try { index = Integer.parseInt(e.getActionCommand()); switch (index) { case PLAY_CMD: handlePlay(); break; case PAUSE_CMD: handlePause(); break; ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ba2070eeb46c459cbb8ad43439d3f9ab12cf63e3/ControlsPaneMng.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/movie/pane/ControlsPaneMng.java
throw new Error("Invalid Action ID "+index, nfe);
throw new Error("Invalid Action ID "+e.getActionCommand(), nfe);
public void actionPerformed(ActionEvent e) { int index = -1; try { index = Integer.parseInt(e.getActionCommand()); switch (index) { case PLAY_CMD: handlePlay(); break; case PAUSE_CMD: handlePause(); break; ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ba2070eeb46c459cbb8ad43439d3f9ab12cf63e3/ControlsPaneMng.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/movie/pane/ControlsPaneMng.java
JTextField editor = view.getEditor();
JTextField editor = view.editor;
private void attachListeners() { JTextField editor = view.getEditor(); editor.addActionListener(this); editor.setActionCommand(""+EDITOR_CMD); //JButton attachButtonListener(view.getPlay(), PLAY_CMD); attachButtonListener(view.getPause(), PAUSE_CMD); attac...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ba2070eeb46c459cbb8ad43439d3f9ab12cf63e3/ControlsPaneMng.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/movie/pane/ControlsPaneMng.java
attachButtonListener(view.getPlay(), PLAY_CMD); attachButtonListener(view.getPause(), PAUSE_CMD); attachButtonListener(view.getStop(), STOP_CMD);
attachButtonListener(view.play, PLAY_CMD); attachButtonListener(view.pause, PAUSE_CMD); attachButtonListener(view.stop, STOP_CMD);
private void attachListeners() { JTextField editor = view.getEditor(); editor.addActionListener(this); editor.setActionCommand(""+EDITOR_CMD); //JButton attachButtonListener(view.getPlay(), PLAY_CMD); attachButtonListener(view.getPause(), PAUSE_CMD); attac...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ba2070eeb46c459cbb8ad43439d3f9ab12cf63e3/ControlsPaneMng.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/movie/pane/ControlsPaneMng.java
JComboBox box = view.getMovieType();
JComboBox box = view.movieType;
private void attachListeners() { JTextField editor = view.getEditor(); editor.addActionListener(this); editor.setActionCommand(""+EDITOR_CMD); //JButton attachButtonListener(view.getPlay(), PLAY_CMD); attachButtonListener(view.getPause(), PAUSE_CMD); attac...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ba2070eeb46c459cbb8ad43439d3f9ab12cf63e3/ControlsPaneMng.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/movie/pane/ControlsPaneMng.java
view.getFPS().addChangeListener(this);
view.fps.addChangeListener(this);
private void attachListeners() { JTextField editor = view.getEditor(); editor.addActionListener(this); editor.setActionCommand(""+EDITOR_CMD); //JButton attachButtonListener(view.getPlay(), PLAY_CMD); attachButtonListener(view.getPause(), PAUSE_CMD); attac...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ba2070eeb46c459cbb8ad43439d3f9ab12cf63e3/ControlsPaneMng.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/movie/pane/ControlsPaneMng.java
val = Integer.parseInt(view.getEditor().getText());
val = Integer.parseInt(view.editor.getText());
private void editorActionHandler() { //playerUIMng.stopTimer(); //freeze boolean valid = false; int val = Player.FPS_MIN; try { val = Integer.parseInt(view.getEditor().getText()); if (Player.FPS_MIN <= val && val <= maxValue) { valid = true; ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ba2070eeb46c459cbb8ad43439d3f9ab12cf63e3/ControlsPaneMng.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/movie/pane/ControlsPaneMng.java
view.getEditor().selectAll();
view.editor.selectAll();
private void editorActionHandler() { //playerUIMng.stopTimer(); //freeze boolean valid = false; int val = Player.FPS_MIN; try { val = Integer.parseInt(view.getEditor().getText()); if (Player.FPS_MIN <= val && val <= maxValue) { valid = true; ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ba2070eeb46c459cbb8ad43439d3f9ab12cf63e3/ControlsPaneMng.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/movie/pane/ControlsPaneMng.java
String edit = view.getEditor().getText(), ed = ""+curRate; if (edit == null || !edit.equals(ed)) view.getEditor().setText(ed);
String edit = view.editor.getText(), ed = ""+curRate; if (edit == null || !edit.equals(ed)) view.editor.setText(ed);
public void focusLost(FocusEvent e) { String edit = view.getEditor().getText(), ed = ""+curRate; if (edit == null || !edit.equals(ed)) view.getEditor().setText(ed); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ba2070eeb46c459cbb8ad43439d3f9ab12cf63e3/ControlsPaneMng.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/movie/pane/ControlsPaneMng.java
view.getPlay().setBorderPainted(false);
view.play.setBorderPainted(false);
private void handlePause() { view.getPlay().setBorderPainted(false); playerUIMng.pause(); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ba2070eeb46c459cbb8ad43439d3f9ab12cf63e3/ControlsPaneMng.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/movie/pane/ControlsPaneMng.java
view.getPlay().setBorderPainted(true);
view.play.setBorderPainted(true);
private void handlePlay() { view.getPlay().setBorderPainted(true); playerUIMng.play(); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ba2070eeb46c459cbb8ad43439d3f9ab12cf63e3/ControlsPaneMng.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/movie/pane/ControlsPaneMng.java
view.getPlay().setBorderPainted(false);
view.play.setBorderPainted(false);
private void handleStop() { view.getPlay().setBorderPainted(false); playerUIMng.stop(); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ba2070eeb46c459cbb8ad43439d3f9ab12cf63e3/ControlsPaneMng.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/movie/pane/ControlsPaneMng.java
int v = ((Integer) view.getFPS().getValue()).intValue(); view.getEditor().setText(""+v);
int v = ((Integer) view.fps.getValue()).intValue(); view.editor.setText(""+v);
public void stateChanged(ChangeEvent e) { int v = ((Integer) view.getFPS().getValue()).intValue(); view.getEditor().setText(""+v); if (v != curRate) synchSpinner(v); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ba2070eeb46c459cbb8ad43439d3f9ab12cf63e3/ControlsPaneMng.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/movie/pane/ControlsPaneMng.java
view.getFPS().setValue(new Integer(val)); view.getEditor().setText(""+val);
view.fps.setValue(new Integer(val)); view.editor.setText(""+val);
private void synchSpinner(int val) { curRate = val; view.getFPS().setValue(new Integer(val)); view.getEditor().setText(""+val); playerUIMng.setTimerDelay(curRate); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ba2070eeb46c459cbb8ad43439d3f9ab12cf63e3/ControlsPaneMng.java/clean/SRC/org/openmicroscopy/shoola/agents/viewer/movie/pane/ControlsPaneMng.java
urls[iterator.previousIndex()] = repository.getResource(location);
URL url = repository.getResource(location); if (url == null) { throw new FatalBeanException("Unable to resolve classpath location " + location); } urls[iterator.previousIndex()] = url;
public void preprocess(SpringApplicationContext applicationContext, XmlBeanDefinitionReader reader, Document document) { // determine the classLoader ClassLoader classLoader; NodeList classpathElements = document.getDocumentElement().getElementsByTagName("classpath"); if (classpathElemen...
52533 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52533/0316595ac42b91de2477f43af228d72dc1949e7a/ClassLoaderXmlPreprocessor.java/buggy/xbean-server/src/main/java/org/apache/xbean/server/spring/configuration/ClassLoaderXmlPreprocessor.java
view.tabs.addChangeListener(new ChangeListener() { public void stateChanged(ChangeEvent e) { handleTabPaneSelection(); }});
private void attachListeners() { view.addWindowListener(new WindowAdapter() { public void windowClosing(WindowEvent we) { handleClose(); } }); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/3db37517e6873d11567ee5822e769ab058e1abed/ROIResultsMng.java/clean/SRC/org/openmicroscopy/shoola/agents/roi/results/ROIResultsMng.java
public void handleClose() { view.setVisible(false); view.dispose(); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/3db37517e6873d11567ee5822e769ab058e1abed/ROIResultsMng.java/clean/SRC/org/openmicroscopy/shoola/agents/roi/results/ROIResultsMng.java
} catch (RubyBugException lBug) { ruby.getRuntime().getErrorStream().print(lBug.getMessage());
protected static void runInterpreter(Reader iReader2Eval, String iFileName, String[] args) { // Initialize Runtime Ruby ruby = Ruby.getDefaultInstance(sRegexpAdapter); // Parse and interpret file IRubyObject lArgv = JavaUtil.convertJavaToRuby(ruby, args); ruby.setVerbose(warning);...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/071973606d94103b2d5cb6c793aa1e8809fc7b2a/Main.java/clean/org/jruby/Main.java
setImages(new HashSet( c.collectFromImageLinks( block ))); List cats = c.collectFromCategoryGroupLinks( block ); this.setGroup( cats.size() > 0 ? (CategoryGroupData) cats.get(0) : null); if ( cats.size() > 1 )
setImages(new HashSet( c.eachLinkedImage( block ))); List cgs = c.eachLinkedCategoryGroup( block ); this.setGroup( cgs.size() > 0 ? (CategoryGroupData) cgs.get(0) : null); if ( cgs.size() > 1 )
public void copy(IObject model, ModelMapper mapper) { if (model instanceof Category) { Category c = (Category) model; super.copy(model,mapper); // Details Details details = c.getDetails(); if (details!=null){ this.setOwner((ExperimenterData) mapper.findTarget(...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/7b5c704279f82fa929138305f70f2f5e6b462c69/CategoryData.java/clean/components/shoola-adapter/src/pojos/CategoryData.java
public void saveData() { if (model.getState() == DISCARDED) throw new IllegalStateException("This method cannot be invoked " + "in the DISCARDED state."); view.finish(); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/9794ffbd035a4de717ee211573b4844dd0eb3371/EditorComponent.java/clean/SRC/org/openmicroscopy/shoola/agents/treeviewer/editors/EditorComponent.java
Set test = Utils.getImagesinPID(result);
Set test = Utils.getImagesinPDI(result);
public void testDuplicateImages() { OMEData data = (OMEData) applicationContext.getBean("data"); Set result = hb.findPDIHierarchies(data.imgsPDI); Set test = Utils.getImagesinPID(result); assertTrue("Images in should eq. images out",data.imgsPDI.size()==test.size()); Set n...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/cbb4b0fb72f022277c9dd42c1ebef064ed3cb76a/LeftOuterJoinTest.java/buggy/components/server/test/org/openmicroscopy/omero/server/itests/LeftOuterJoinTest.java
Set test = Utils.getImagesinPID(result);
Set test = Utils.getImagesinPDI(result);
public void testImageThumbnailExplodsOnHessianSerialization() { Set imgIds = new HashSet(); imgIds.add(new Integer(1191)); imgIds.add(new Integer(4665)); imgIds.add(new Integer(1304)); imgIds.add(new Integer(4977)); imgIds.add(new Integer(3540)); imgIds.add(new Integ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/cbb4b0fb72f022277c9dd42c1ebef064ed3cb76a/LeftOuterJoinTest.java/buggy/components/server/test/org/openmicroscopy/omero/server/itests/LeftOuterJoinTest.java
runInterpreterOnFile(args[0]);
runInterpreterOnFile(args[i]);
public static void main (String args[]) { System.out.println(); System.out.println("----------------------------------------------------"); System.out.println("--- WARNING this is an ALPHA version of JRuby!!! ---"); System.out.println("----------------------------------------------------...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/03950522a75c28f406bd4cb011cb1916a662366d/Main.java/clean/org/jruby/Main.java
if (now != -1) { System.out.println("Runtime: " + (System.currentTimeMillis() - now) + " ms"); }
public static void main (String args[]) { System.out.println(); System.out.println("----------------------------------------------------"); System.out.println("--- WARNING this is an ALPHA version of JRuby!!! ---"); System.out.println("----------------------------------------------------...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/03950522a75c28f406bd4cb011cb1916a662366d/Main.java/clean/org/jruby/Main.java
if (!getClass().equals(original.getClass()) || getMetaClass().getRealClass() != original.getMetaClass().getRealClass()) {
if (!getClass().equals(original.getClass())) {
public IRubyObject initialize_copy(IRubyObject original) { if (this != original) { checkFrozen(); if (!getClass().equals(original.getClass()) || getMetaClass().getRealClass() != original.getMetaClass().getRealClass()) { throw getRuntime().newTypeError("initialize_copy should take same c...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/be2d0d67acb903e2b90437be035dc5e32b7a3ebf/RubyObject.java/clean/src/org/jruby/RubyObject.java
lineNumber(node);
private void setupArgs(Node node) { lineNumber(node); if (node == null) { mv.visitInsn(Opcodes.ICONST_0); mv.visitTypeInsn(Opcodes.ANEWARRAY, IRUBYOBJECT); } else if (node instanceof ArrayNode) { int count = ((ArrayNode)node).size(); mv.visitLdcInsn(n...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/1a9bdcaf49f77f5c15fe4d5f69d5815c92686aca/InstructionCompiler2.java/buggy/src/org/jruby/ast/executable/InstructionCompiler2.java
lineNumber(node);
private void setupArgs(Node node) { lineNumber(node); if (node == null) { mv.visitInsn(Opcodes.ICONST_0); mv.visitTypeInsn(Opcodes.ANEWARRAY, IRUBYOBJECT); } else if (node instanceof ArrayNode) { int count = ((ArrayNode)node).size(); mv.visitLdcInsn(n...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/1a9bdcaf49f77f5c15fe4d5f69d5815c92686aca/InstructionCompiler2.java/buggy/src/org/jruby/ast/executable/InstructionCompiler2.java
throw new NotCompilableException("Node not supported: " + iVisited.toString());
lineNumber(iVisited); loadThreadContext(); mv.visitLdcInsn(iVisited.getName()); invokeThreadContext("getConstant", "(Ljava/lang/String;)Lorg/jruby/runtime/builtin/IRubyObject;"); return null;
public Instruction visitConstNode(ConstNode iVisited) { throw new NotCompilableException("Node not supported: " + iVisited.toString()); }
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/1a9bdcaf49f77f5c15fe4d5f69d5815c92686aca/InstructionCompiler2.java/buggy/src/org/jruby/ast/executable/InstructionCompiler2.java
throw new NotCompilableException("Node not supported: " + iVisited.toString());
lineNumber(iVisited); loadRuntime(); invokeIRuby("getNil", "()Lorg/jruby/runtime/builtin/IRubyObject;"); if (iVisited.getBodyNode() != null) { Label l1 = new Label(); Label l2 = new Label(); mv.visitLabel(l1); iVisited.getConditionNode().accept(this); invokeIRubyObject("isTrue", "()Z"); mv.visitJumpInsn(Opcodes...
public Instruction visitUntilNode(UntilNode iVisited) { throw new NotCompilableException("Node not supported: " + iVisited.toString()); }
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/1a9bdcaf49f77f5c15fe4d5f69d5815c92686aca/InstructionCompiler2.java/buggy/src/org/jruby/ast/executable/InstructionCompiler2.java
throw new NotCompilableException("Node not supported: " + iVisited.toString());
lineNumber(iVisited); loadSelf(); mv.visitLdcInsn(iVisited.getName()); mv.visitFieldInsn(Opcodes.GETSTATIC, "org/jruby/runtime/builtin/IRubyObject", "NULL_ARRAY", "[Lorg/jruby/runtime/builtin/IRubyObject;"); mv.visitFieldInsn(Opcodes.GETSTATIC, "org/jruby/runtime/CallType", "FUNCTIONAL", "Lorg/jruby/runtime/CallType;...
public Instruction visitVCallNode(VCallNode iVisited) { throw new NotCompilableException("Node not supported: " + iVisited.toString()); }
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/1a9bdcaf49f77f5c15fe4d5f69d5815c92686aca/InstructionCompiler2.java/buggy/src/org/jruby/ast/executable/InstructionCompiler2.java
return newBignum(input.getRuntime(), value);
RubyBignum result = newBignum(input.getRuntime(), value); input.register(result); return result;
public static RubyBignum unmarshalFrom(UnmarshalStream input) throws IOException { int signum = (input.readUnsignedByte() == '+' ? 1 : -1); int shortLength = input.unmarshalInt(); byte[] digits = new byte[shortLength * 2]; for (int i = digits.length - 1; i >= 0; i--) { digits[...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/9db4d278a734c4fdfd9a83ed95575a45577f1e1b/RubyBignum.java/buggy/org/jruby/RubyBignum.java
int count = env.getBrowserManager().getBrowserCount(); final int browserIndex = count;
final int browserIndex = 0;
public void loadDataset(int datasetID) { BrowserManager manager = env.getBrowserManager(); int index; if((index = manager.hasBrowser(datasetID)) != BrowserManager.NOT_FOUND) { manager.setActiveBrowser(index); return; } DataManagementServi...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/2d1062bda5aed3b62c521d12513a39759ea42f71/BrowserAgent.java/buggy/SRC/org/openmicroscopy/shoola/agents/browser/BrowserAgent.java
BrowserEnvironment env = BrowserEnvironment.getInstance(); BrowserManager manager = env.getBrowserManager(); manager.addSelectionListener(this);
public HeatMapManager() { datasetModelMap = new HashMap(); embeddedUI = new HeatMapUI(); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/e83036080b3a8ade884eca150f3f3c2004b556c9/HeatMapManager.java/buggy/SRC/org/openmicroscopy/shoola/agents/browser/heatmap/HeatMapManager.java
if(browserManager != null) { browserManager.addSelectionListener(manager); }
public void setHeatMapManager(HeatMapManager manager) { this.heatMapManager = manager; }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/e83036080b3a8ade884eca150f3f3c2004b556c9/BrowserEnvironment.java/buggy/SRC/org/openmicroscopy/shoola/agents/browser/BrowserEnvironment.java