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RubyObject[] args = ArgsUtil.setupArgs(ruby, self, node.getArgsNode());
RubyPointer args = ArgsUtil.setupArgs(ruby, self, node.getArgsNode());
private boolean isRescueHandled(Ruby ruby, RubyObject self, Node node) { // TMP_PROTECT; if (node.getArgsNode() == null) { // return ruby.getActException().m_kind_of(ruby.getExceptions().getStandardError()).isTrue(); } RubyBlock tmpBlock = ArgsUtil.beginCallArgs(ruby);...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/f629550c5947df9c1dbe414645f3dc76bcb70df4/RescueNode.java/clean/org/jruby/nodes/RescueNode.java
for (int i = 0; i < args.length; i++) { if (args[i].m_kind_of(ruby.getClasses().getModuleClass()).isFalse()) {
for (int i = 0; i < args.size(); i++) { if (args.getRuby(i).m_kind_of(ruby.getClasses().getModuleClass()).isFalse()) {
private boolean isRescueHandled(Ruby ruby, RubyObject self, Node node) { // TMP_PROTECT; if (node.getArgsNode() == null) { // return ruby.getActException().m_kind_of(ruby.getExceptions().getStandardError()).isTrue(); } RubyBlock tmpBlock = ArgsUtil.beginCallArgs(ruby);...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/f629550c5947df9c1dbe414645f3dc76bcb70df4/RescueNode.java/clean/org/jruby/nodes/RescueNode.java
if (ruby.getActException().m_kind_of((RubyModule)args[i]).isTrue()) {
if (ruby.getActException().m_kind_of((RubyModule)args.getRuby(i)).isTrue()) {
private boolean isRescueHandled(Ruby ruby, RubyObject self, Node node) { // TMP_PROTECT; if (node.getArgsNode() == null) { // return ruby.getActException().m_kind_of(ruby.getExceptions().getStandardError()).isTrue(); } RubyBlock tmpBlock = ArgsUtil.beginCallArgs(ruby);...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/f629550c5947df9c1dbe414645f3dc76bcb70df4/RescueNode.java/clean/org/jruby/nodes/RescueNode.java
Block b = (Block) bb.build(new BuildContext(broker));
bb.build(new BuildContext(broker));
public static void parseTemplate(String name, Reader in) { try { Builder bb = parser.parseBlock(name, in); Block b = (Block) bb.build(new BuildContext(broker)); } catch (Exception e) { System.err.println("Exception parsing template " + name + "\n" + e); } }
52513 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52513/8f5880751893a7e5dd9da25d036747a39c9b25b5/CheckTemplates.java/buggy/webmacro/src/org/webmacro/tools/CheckTemplates.java
titleLabel.setFont(new Font("Verdana", Font.BOLD, 11));
titleLabel.setFont(new Font("Dialog", Font.BOLD, 11));
public SendMessage() { setLayout(new GridBagLayout()); setBackground(new Color(250, 249, 242)); add(imageLabel, new GridBagConstraints(0, 0, 1, 3, 0.0, 0.0, GridBagConstraints.NORTHWEST, GridBagConstraints.NONE, new Insets(5, 5, 5, 5), 0, 0)); add(titleLabel, new GridBagConstraints(1, 0,...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
cancelButton.setText("Cancel"); retryButton.setText("Retry");
cancelButton.setText(Res.getString("cancel")); retryButton.setText(Res.getString("retry"));
public SendMessage() { setLayout(new GridBagLayout()); setBackground(new Color(250, 249, 242)); add(imageLabel, new GridBagConstraints(0, 0, 1, 3, 0.0, 0.0, GridBagConstraints.NORTHWEST, GridBagConstraints.NONE, new Insets(5, 5, 5, 5), 0, 0)); add(titleLabel, new GridBagConstraints(1, 0,...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
cancelButton.setFont(new Font("Verdana", Font.BOLD, 10));
cancelButton.setFont(new Font("Dialog", Font.BOLD, 10));
public SendMessage() { setLayout(new GridBagLayout()); setBackground(new Color(250, 249, 242)); add(imageLabel, new GridBagConstraints(0, 0, 1, 3, 0.0, 0.0, GridBagConstraints.NORTHWEST, GridBagConstraints.NONE, new Insets(5, 5, 5, 5), 0, 0)); add(titleLabel, new GridBagConstraints(1, 0,...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
retryButton.setFont(new Font("Verdana", Font.BOLD, 10));
retryButton.setFont(new Font("Dialog", Font.BOLD, 10));
public SendMessage() { setLayout(new GridBagLayout()); setBackground(new Color(250, 249, 242)); add(imageLabel, new GridBagConstraints(0, 0, 1, 3, 0.0, 0.0, GridBagConstraints.NORTHWEST, GridBagConstraints.NONE, new Insets(5, 5, 5, 5), 0, 0)); add(titleLabel, new GridBagConstraints(1, 0,...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
label.setToolTipText("Click to open");
label.setToolTipText(Res.getString("message.click.to.open"));
private void makeClickable(final JLabel label) { label.setToolTipText("Click to open"); label.addMouseListener(new MouseAdapter() { public void mouseClicked(MouseEvent e) { openFile(fileToSend); } public void mouseEntered(MouseEvent e) { l...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
titleLabel.setText("Waiting for " + contactItem.getNickname() + " to accept file transfer.");
titleLabel.setText(Res.getString("message.transfer.waiting.on.user", contactItem.getNickname()));
public void sendFile(final OutgoingFileTransfer transfer, FileTransferManager transferManager, final String jid, final String nickname) { this.transferManager = transferManager; cancelButton.setVisible(true); retryButton.setVisible(false); this.fullJID = jid; this.nickname = nickn...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
if (status == Status.ERROR || status == Status.COMPLETE || status == Status.CANCLED || status == Status.REFUSED) {
if (status == Status.error || status == Status.complete || status == Status.cancelled || status == Status.refused) {
public void sendFile(final OutgoingFileTransfer transfer, FileTransferManager transferManager, final String jid, final String nickname) { this.transferManager = transferManager; cancelButton.setVisible(true); retryButton.setVisible(false); this.fullJID = jid; this.nickname = nickn...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
if (status == Status.ERROR || status == Status.COMPLETE || status == Status.CANCLED || status == Status.REFUSED) {
if (status == Status.error || status == Status.complete || status == Status.cancelled || status == Status.refused) {
public Object construct() { while (true) { try { Thread.sleep(10); FileTransfer.Status status = transfer.getStatus(); if (status == Status.ERROR || status == Status.COMPLETE || s...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
if (status == Status.NEGOTIATING_STREAM) { titleLabel.setText("Negotiating file transfer with " + nickname + ". Please wait...");
if (status == Status.negotiating_stream) { titleLabel.setText(Res.getString("message.negotiation.file.transfer", nickname));
private void updateBar(final OutgoingFileTransfer transfer, String nickname) { FileTransfer.Status status = transfer.getStatus(); if (status == Status.NEGOTIATING_STREAM) { titleLabel.setText("Negotiating file transfer with " + nickname + ". Please wait..."); } else if (status...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
else if (status == Status.ERROR) {
else if (status == Status.error) {
private void updateBar(final OutgoingFileTransfer transfer, String nickname) { FileTransfer.Status status = transfer.getStatus(); if (status == Status.NEGOTIATING_STREAM) { titleLabel.setText("Negotiating file transfer with " + nickname + ". Please wait..."); } else if (status...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
titleLabel.setText("You were unable to send the file to " + nickname);
titleLabel.setText(Res.getString("message.unable.to.send.file", nickname));
private void updateBar(final OutgoingFileTransfer transfer, String nickname) { FileTransfer.Status status = transfer.getStatus(); if (status == Status.NEGOTIATING_STREAM) { titleLabel.setText("Negotiating file transfer with " + nickname + ". Please wait..."); } else if (status...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
else if (status == Status.IN_PROGRESS) { titleLabel.setText("Sending a file to " + nickname);
else if (status == Status.in_progress) { titleLabel.setText(Res.getString("message.sending.file.to", nickname));
private void updateBar(final OutgoingFileTransfer transfer, String nickname) { FileTransfer.Status status = transfer.getStatus(); if (status == Status.NEGOTIATING_STREAM) { titleLabel.setText("Negotiating file transfer with " + nickname + ". Please wait..."); } else if (status...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
else if (status == Status.COMPLETE) {
else if (status == Status.complete) {
private void updateBar(final OutgoingFileTransfer transfer, String nickname) { FileTransfer.Status status = transfer.getStatus(); if (status == Status.NEGOTIATING_STREAM) { titleLabel.setText("Negotiating file transfer with " + nickname + ". Please wait..."); } else if (status...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
titleLabel.setText("You have sent a file to " + nickname + ".");
titleLabel.setText(Res.getString("message.you.have.sent", nickname));
private void updateBar(final OutgoingFileTransfer transfer, String nickname) { FileTransfer.Status status = transfer.getStatus(); if (status == Status.NEGOTIATING_STREAM) { titleLabel.setText("Negotiating file transfer with " + nickname + ". Please wait..."); } else if (status...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
else if (status == Status.CANCLED) {
else if (status == Status.cancelled) {
private void updateBar(final OutgoingFileTransfer transfer, String nickname) { FileTransfer.Status status = transfer.getStatus(); if (status == Status.NEGOTIATING_STREAM) { titleLabel.setText("Negotiating file transfer with " + nickname + ". Please wait..."); } else if (status...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
titleLabel.setText("You have cancelled the file transfer.");
titleLabel.setText(Res.getString("message.file.transfer.canceled"));
private void updateBar(final OutgoingFileTransfer transfer, String nickname) { FileTransfer.Status status = transfer.getStatus(); if (status == Status.NEGOTIATING_STREAM) { titleLabel.setText("Negotiating file transfer with " + nickname + ". Please wait..."); } else if (status...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
else if (status == Status.REFUSED) {
else if (status == Status.refused) {
private void updateBar(final OutgoingFileTransfer transfer, String nickname) { FileTransfer.Status status = transfer.getStatus(); if (status == Status.NEGOTIATING_STREAM) { titleLabel.setText("Negotiating file transfer with " + nickname + ". Please wait..."); } else if (status...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
titleLabel.setText(nickname + " did not accept the file transfer.");
titleLabel.setText(Res.getString("message.file.transfer.rejected", nickname));
private void updateBar(final OutgoingFileTransfer transfer, String nickname) { FileTransfer.Status status = transfer.getStatus(); if (status == Status.NEGOTIATING_STREAM) { titleLabel.setText("Negotiating file transfer with " + nickname + ". Please wait..."); } else if (status...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/ede843505c046d47bba853e049191aedc32bd2fe/SendMessage.java/buggy/src/java/org/jivesoftware/sparkimpl/plugin/filetransfer/transfer/ui/SendMessage.java
int w = getIcon().getIconWidth();
int w = 0; if (getIcon() != null) w += getIcon().getIconWidth();
public Component getTreeCellRendererComponent(JTree tree, Object value, boolean sel, boolean expanded, boolean leaf, int row, boolean hasFocus) { super.getTreeCellRendererComponent(tree, value, sel, expanded, leaf, ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ea7509babe2344eb702969105eb77096cc5b6bcf/TreeCellRenderer.java/buggy/SRC/org/openmicroscopy/shoola/agents/treeviewer/util/TreeCellRenderer.java
w += fm.stringWidth(getText());
if (node.getUserObject() instanceof ImageData) w += fm.stringWidth(node.getNodeName()); else w += fm.stringWidth(getText());
public Component getTreeCellRendererComponent(JTree tree, Object value, boolean sel, boolean expanded, boolean leaf, int row, boolean hasFocus) { super.getTreeCellRendererComponent(tree, value, sel, expanded, leaf, ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/ea7509babe2344eb702969105eb77096cc5b6bcf/TreeCellRenderer.java/buggy/SRC/org/openmicroscopy/shoola/agents/treeviewer/util/TreeCellRenderer.java
Object[] tmp = table.values().toArray(); IRubyObject[] array = new IRubyObject[tmp.length]; for (int i = 0; i < tmp.length; i++) { array[i] = (IRubyObject) ((WeakSymbolEntry) tmp[i]).get(); }
int length = table.size(); IRubyObject[] array = new IRubyObject[length]; System.arraycopy(table.values().toArray(), 0, array, 0, length);
public IRubyObject[] all_symbols() { Object[] tmp = table.values().toArray(); IRubyObject[] array = new IRubyObject[tmp.length]; for (int i = 0; i < tmp.length; i++) { array[i] = (IRubyObject) ((WeakSymbolEntry) tmp[i]).get(); } r...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/4666322dcb0221527ac26836c92d72564aab3ecd/RubySymbol.java/buggy/src/org/jruby/RubySymbol.java
public RubySymbol lookup(String name) { clean(); WeakSymbolEntry ref = (WeakSymbolEntry) table.get(name); if (ref == null) { return null;
public RubySymbol lookup(long symbolId) { Iterator iter = table.values().iterator(); while (iter.hasNext()) { RubySymbol symbol = (RubySymbol) iter.next(); if (symbol != null) { if (symbol.id == symbolId) { return symbol; } }
public RubySymbol lookup(String name) { clean(); WeakSymbolEntry ref = (WeakSymbolEntry) table.get(name); if (ref == null) { return null; } return (RubySymbol) ref.get(); }
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/4666322dcb0221527ac26836c92d72564aab3ecd/RubySymbol.java/buggy/src/org/jruby/RubySymbol.java
return (RubySymbol) ref.get();
return null;
public RubySymbol lookup(String name) { clean(); WeakSymbolEntry ref = (WeakSymbolEntry) table.get(name); if (ref == null) { return null; } return (RubySymbol) ref.get(); }
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/4666322dcb0221527ac26836c92d72564aab3ecd/RubySymbol.java/buggy/src/org/jruby/RubySymbol.java
clean(); table.put(symbol.asSymbol(), new WeakSymbolEntry(symbol, unusedSymbols));
table.put(symbol.asSymbol(), symbol);
public void store(RubySymbol symbol) { clean(); table.put(symbol.asSymbol(), new WeakSymbolEntry(symbol, unusedSymbols)); }
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/4666322dcb0221527ac26836c92d72564aab3ecd/RubySymbol.java/buggy/src/org/jruby/RubySymbol.java
System.err.println(node);
private void init(BrowserTopModel topModel) { env = BrowserEnvironment.getInstance(); setBackground(new Color(192,192,192)); layoutMap = new HashMap(); footprint = new Rectangle2D.Double(0,0,0,0); hoverSensitive = new HashSet(); regionSensitive = new HashSet(); ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/5214c63d0780f0ad6707f85bd79e0dbdfdc21e65/BrowserView.java/buggy/SRC/org/openmicroscopy/shoola/agents/browser/BrowserView.java
System.err.println(node);
public void drag(PInputEvent e) { PPickPath pickPath = e.getPath(); PNode node; while((node = pickPath.getPickedNode()) != null && !e.isHandled()) { if(node instanceof MouseDragSensitive) ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/5214c63d0780f0ad6707f85bd79e0dbdfdc21e65/BrowserView.java/buggy/SRC/org/openmicroscopy/shoola/agents/browser/BrowserView.java
ec.setPrincipal( null );
public void testNoLoginThrowsException() throws Exception { try { q.find(Experimenter.class,0l); fail("Non-logged-in call allowed!"); } catch (RuntimeException e){ // ok. } }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/59b11883b95c926d6706e6d30b4cdb898088683c/LoginTest.java/clean/components/server/test/ome/server/itests/LoginTest.java
/* * Now that we're initialized, we can start listening for folder. * selections. If a folder is already selected, the * GlobalSelectionListener will notify us as it is being constructed. */ globalSelectionListener = new GlobalSelectionListener<Object>(this) { @Override protected Object wantObject(Object o) { return ...
public void createPartControl(Composite parent) { viewArea = parent; viewAreaLayout = new FormLayout(); viewArea.setLayout(viewAreaLayout); label = new Label(viewArea, SWT.LEFT | SWT.WRAP); setUpViewer(); FormData lbd = new FormData(); lbd.top = new FormAttachment(0, 2); lbd.left = new FormAttachment(0, ...
53330 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/53330/076da01e30cdb745b692fd275d6d630144e973fd/InfstatsPartView.java/clean/eclipse/cycinf-plugin/src/cycinf/ui/InfstatsPartView.java
globalSelectionListener.unregister();
public void dispose() { super.dispose(); globalSelectionListener.unregister(); }
53330 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/53330/076da01e30cdb745b692fd275d6d630144e973fd/InfstatsPartView.java/clean/eclipse/cycinf-plugin/src/cycinf/ui/InfstatsPartView.java
globalSelectionListener = new GlobalSelectionListener<Object>(this) { @Override protected Object wantObject(Object o) { return (o instanceof IContainer) ? o : marshallElementFrom(o); } @Override protected void selectObjects(List<Object> objects) { /* We could have a lot of IContainers and a lot of Elements here... * We...
private void setUpViewer() { theTableViewer = new TableViewer(viewArea, SWT.MULTI | SWT.H_SCROLL | SWT.V_SCROLL); theTableViewer.setContentProvider(new ViewContentProvider()); theTableViewer.setLabelProvider(new ViewLabelProvider()); getSite().setSelectionProvider(theTableViewer); globalSelectionListener = new ...
53330 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/53330/076da01e30cdb745b692fd275d6d630144e973fd/InfstatsPartView.java/clean/eclipse/cycinf-plugin/src/cycinf/ui/InfstatsPartView.java
} else { matcher.reset(target);
public RubyObject search(Ruby ruby, String target, int startPos) { if (matcher == null) { matcher = pattern.matcher(target); } if (matcher.find(startPos)) { int count = matcher.groupCount() + 1; int[] begin = new int[count]; int[] end = new int[count]...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/0a7181933af700ea8025a4197f3a5ebcc08333c3/JDKRegexpAdapter.java/buggy/org/jruby/regexp/JDKRegexpAdapter.java
context = new Context(null);
context = wm.getContext();
public static void main(String arg[]) { Log.traceExceptions(true); Log.setLevel(Log.ALL); Log.setTarget(System.err); if (arg.length != 0) { System.out.println("Enabling log types"); Log.enableTypes(arg); } // Build a context WebMacro wm = null; Context conte...
52513 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52513/0906150af920f3e3a970ec498a9f12fc782ecb22/StreamTemplate.java/clean/webmacro/src/org/webmacro/engine/StreamTemplate.java
boolean isOwner = model.isObjectOwner();
private JPanel buildPermissions(final PermissionData permissions) { JPanel content = new JPanel(); double[][] tl = {{TableLayout.PREFERRED, TableLayout.FILL}, //columns {TableLayout.PREFERRED, TableLayout.PREFERRED, TableLayout.PREFERRED} }; //rows content....
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/9794ffbd035a4de717ee211573b4844dd0eb3371/DOInfo.java/clean/SRC/org/openmicroscopy/shoola/agents/treeviewer/editors/DOInfo.java
box.setEnabled(isOwner);
box.setEnabled(false);
private JPanel buildPermissions(final PermissionData permissions) { JPanel content = new JPanel(); double[][] tl = {{TableLayout.PREFERRED, TableLayout.FILL}, //columns {TableLayout.PREFERRED, TableLayout.PREFERRED, TableLayout.PREFERRED} }; //rows content....
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/9794ffbd035a4de717ee211573b4844dd0eb3371/DOInfo.java/clean/SRC/org/openmicroscopy/shoola/agents/treeviewer/editors/DOInfo.java
box.setEnabled(isOwner);
box.setEnabled(false);
private JPanel buildPermissions(final PermissionData permissions) { JPanel content = new JPanel(); double[][] tl = {{TableLayout.PREFERRED, TableLayout.FILL}, //columns {TableLayout.PREFERRED, TableLayout.PREFERRED, TableLayout.PREFERRED} }; //rows content....
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/9794ffbd035a4de717ee211573b4844dd0eb3371/DOInfo.java/clean/SRC/org/openmicroscopy/shoola/agents/treeviewer/editors/DOInfo.java
box.setEnabled(isOwner);
box.setEnabled(false);
private JPanel buildPermissions(final PermissionData permissions) { JPanel content = new JPanel(); double[][] tl = {{TableLayout.PREFERRED, TableLayout.FILL}, //columns {TableLayout.PREFERRED, TableLayout.PREFERRED, TableLayout.PREFERRED} }; //rows content....
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/9794ffbd035a4de717ee211573b4844dd0eb3371/DOInfo.java/clean/SRC/org/openmicroscopy/shoola/agents/treeviewer/editors/DOInfo.java
box.setEnabled(isOwner);
box.setEnabled(false);
private JPanel buildPermissions(final PermissionData permissions) { JPanel content = new JPanel(); double[][] tl = {{TableLayout.PREFERRED, TableLayout.FILL}, //columns {TableLayout.PREFERRED, TableLayout.PREFERRED, TableLayout.PREFERRED} }; //rows content....
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/9794ffbd035a4de717ee211573b4844dd0eb3371/DOInfo.java/clean/SRC/org/openmicroscopy/shoola/agents/treeviewer/editors/DOInfo.java
box.setEnabled(isOwner);
box.setEnabled(false);
private JPanel buildPermissions(final PermissionData permissions) { JPanel content = new JPanel(); double[][] tl = {{TableLayout.PREFERRED, TableLayout.FILL}, //columns {TableLayout.PREFERRED, TableLayout.PREFERRED, TableLayout.PREFERRED} }; //rows content....
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/9794ffbd035a4de717ee211573b4844dd0eb3371/DOInfo.java/clean/SRC/org/openmicroscopy/shoola/agents/treeviewer/editors/DOInfo.java
box.setEnabled(isOwner);
box.setEnabled(false);
private JPanel buildPermissions(final PermissionData permissions) { JPanel content = new JPanel(); double[][] tl = {{TableLayout.PREFERRED, TableLayout.FILL}, //columns {TableLayout.PREFERRED, TableLayout.PREFERRED, TableLayout.PREFERRED} }; //rows content....
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/9794ffbd035a4de717ee211573b4844dd0eb3371/DOInfo.java/clean/SRC/org/openmicroscopy/shoola/agents/treeviewer/editors/DOInfo.java
assertTrue(emptyColl,getHb().findCGCPaths(test,false).size()==0);
public void testNulls(){ Set test = new HashSet(); test.add(new Integer(-1)); // Non-existence set of ids int nonExp = -1; // Non-existence experimenter ID // assertTrue(emptyColl,getHb().findDatasetAnnotations(test).size()==0); assertTrue(emptyColl,getHb().findDatasetAnnot...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/b6382cda97f15631c059881b08c1708cc8b2b7d8/AbstractOmeroHierarchyBrowserIntegrationTest.java/buggy/components/common/src/org/openmicroscopy/omero/tests/AbstractOmeroHierarchyBrowserIntegrationTest.java
this(1024);
this(1024);
public QueueWriter() { this(1024); }
52513 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52513/7464194549a92ed6f747ee152f40a528e2134993/QueueWriter.java/clean/webmacro/src/org/webmacro/util/QueueWriter.java
private void ensureLocalCapacity(int size) { if (count < 0 || buffer[count] != null) { count++; offset[count] = localPos; length[count] = 0; if (count >= buffer.length) { increaseCapacity(); } } if ((localPos + size) >= local.length) { char[] tmpLocal = new char[local.length * 2 + size];
private void ensureLocalCapacity(int len) { if ((localPos + len) >= local.length) { char[] tmpLocal = new char[local.length * 2 + len];
private void ensureLocalCapacity(int size) { if (count < 0 || buffer[count] != null) { count++; offset[count] = localPos; length[count] = 0; if (count >= buffer.length) { increaseCapacity(); } } if ((localPos + size) >= local.length) { char[] ...
52513 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52513/7464194549a92ed6f747ee152f40a528e2134993/QueueWriter.java/clean/webmacro/src/org/webmacro/util/QueueWriter.java
public static void main(String arg[]) throws Exception {
public static void main(String arg[]) throws Exception {
public static void main(String arg[]) throws Exception { QueueWriter qw = new QueueWriter(3); char cary[] = "Hello, brave new world".toCharArray(); for (int j = 0; j < 2; j++) { for (int i = 0; i < arg.length; i++) { qw.write(arg[i],1,arg[i].length() - 2); // qw.write(arg...
52513 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52513/7464194549a92ed6f747ee152f40a528e2134993/QueueWriter.java/clean/webmacro/src/org/webmacro/util/QueueWriter.java
for (int i = 0; i < arg.length; i++) { qw.write(arg[i],1,arg[i].length() - 2); qw.write(' '); qw.write(cary,7,6); } System.out.println("Count: " + qw.count); System.out.println("- - - - Output - - - -"); System.out.println(qw.toString()); qw.reset(); }
for (int l = 0; l < 20; l++) { for (int i = 0; i < arg.length; i++) { qw.write(new String(arg[i])); qw.write(new String(arg[i]),0,arg[i].length()); qw.write(' '); qw.write(cary,7,6); } System.out.println("\ncount: " + qw.count); System.out.println("buffer: " + qw.buffer.length); System.out.println("local: " + qw.local....
public static void main(String arg[]) throws Exception { QueueWriter qw = new QueueWriter(3); char cary[] = "Hello, brave new world".toCharArray(); for (int j = 0; j < 2; j++) { for (int i = 0; i < arg.length; i++) { qw.write(arg[i],1,arg[i].length() - 2); // qw.write(arg...
52513 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52513/7464194549a92ed6f747ee152f40a528e2134993/QueueWriter.java/clean/webmacro/src/org/webmacro/util/QueueWriter.java
buffer[i] = null; offset[i] = 0; length[i] = 0; localPos = 0; count = -1; size = 0;
buffer[i] = null; offset[i] = 0; length[i] = 0; localPos = 0; count = -1; size = 0;
public void reset() { for (int i = 0; i <= count; i++) { buffer[i] = null; offset[i] = 0; length[i] = 0; localPos = 0; count = -1; size = 0; } }
52513 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52513/7464194549a92ed6f747ee152f40a528e2134993/QueueWriter.java/clean/webmacro/src/org/webmacro/util/QueueWriter.java
b = (buffer[i] == null) ? local : buffer[i]; buf.append(b,offset[i],length[i]);
b = (buffer[i] == null) ? local : buffer[i]; buf.append(b,offset[i],length[i]);
public String toString() { StringBuffer buf = new StringBuffer(size); char[] b; for (int i = 0; i <= count; i++) { b = (buffer[i] == null) ? local : buffer[i]; buf.append(b,offset[i],length[i]); } return buf.toString(); }
52513 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52513/7464194549a92ed6f747ee152f40a528e2134993/QueueWriter.java/clean/webmacro/src/org/webmacro/util/QueueWriter.java
public void write(char c[], int off, int len) { count++; if (count >= buffer.length) { increaseCapacity(); } buffer[count] = c; offset[count] = off; length[count] = len; // update statistics size += len; }
52513 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52513/7464194549a92ed6f747ee152f40a528e2134993/QueueWriter.java/clean/webmacro/src/org/webmacro/util/QueueWriter.java
b = (buffer[i] == null) ? local : buffer[i]; out.write(b,offset[i],length[i]);
b = (buffer[i] == null) ? local : buffer[i]; out.write(b,offset[i],length[i]);
public void writeTo(Writer out) throws IOException { char[] b; for (int i = 0; i <= count; i++) { b = (buffer[i] == null) ? local : buffer[i]; out.write(b,offset[i],length[i]); } }
52513 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52513/7464194549a92ed6f747ee152f40a528e2134993/QueueWriter.java/clean/webmacro/src/org/webmacro/util/QueueWriter.java
dir = (NormalizedFile)new NormalizedFile(newPath.getValue()).getAbsoluteFile();
dir = (NormalizedFile)new NormalizedFile(newPath.toString()).getAbsoluteFile();
public IRubyObject initialize(RubyString newPath) { newPath.checkSafeString();// TODO: Consolidate this absolute file nonsense dir = (NormalizedFile)new NormalizedFile(newPath.getValue()).getAbsoluteFile(); if (!dir.isDirectory()) { dir = null; throw getRuntime().newErrnoE...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/9f2efc63a858fa0507245b207025eab027840a04/RubyDir.java/clean/src/org/jruby/RubyDir.java
throw getRuntime().newErrnoENOENTError(newPath.getValue() + " is not a directory");
throw getRuntime().newErrnoENOENTError(newPath.toString() + " is not a directory");
public IRubyObject initialize(RubyString newPath) { newPath.checkSafeString();// TODO: Consolidate this absolute file nonsense dir = (NormalizedFile)new NormalizedFile(newPath.getValue()).getAbsoluteFile(); if (!dir.isDirectory()) { dir = null; throw getRuntime().newErrnoE...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/9f2efc63a858fa0507245b207025eab027840a04/RubyDir.java/clean/src/org/jruby/RubyDir.java
RubyString result = new RubyString(getRuntime(), snapshot[pos]);
RubyString result = getRuntime().newString(snapshot[pos]);
public IRubyObject read() { if (!isOpen) { throw getRuntime().newIOError("Directory already closed"); } if (pos >= snapshot.length) { return getRuntime().getNil(); } RubyString result = new RubyString(getRuntime(), snapshot[pos]); pos++; return result; }
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/9f2efc63a858fa0507245b207025eab027840a04/RubyDir.java/clean/src/org/jruby/RubyDir.java
String ls = System.getProperty("line.separator"); if (!modes.isBinary() && !"\n".equals(ls)) { shouldReplace = true; if ("\r".equals(ls)) { isWin = false; } }
public IOHandlerSeekable(IRuby runtime, String path, IOModes modes) throws IOException, InvalidValueException { super(runtime); this.path = path; this.modes = modes; JRubyFile theFile = JRubyFile.create(runtime.getCurrentDirectory(),path); if (theFile.exists()...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/500bc20ac823da86d173c906df2b9e776a4d35e2/IOHandlerSeekable.java/clean/src/org/jruby/util/IOHandlerSeekable.java
if(!shouldReplace) { return file.read(); } else { int curr = file.read(); if (curr != '\r') { return curr; } else if (!isWin) { return '\n'; } else { int next = file.read(); if(next == '\n') { return next; } file.seek(file.getFilePointer() - 1); return curr; } }
return file.read();
public int sysread() throws IOException { if(!shouldReplace) { return file.read(); } else { int curr = file.read(); if (curr != '\r') { return curr; } else if (!isWin) { return '\n'; } else { int next =...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/500bc20ac823da86d173c906df2b9e776a4d35e2/IOHandlerSeekable.java/clean/src/org/jruby/util/IOHandlerSeekable.java
boolean moderated = wc.getForm ("MODERATED").equals ("true");
boolean moderated = wc.getForm ("MODERATED") != null && wc.getForm("MODERATED").equals ("true");
protected WikiPage createNewPage (WikiSystem wiki, WebContext wc, WikiUser user) throws Exception { // get the page elements from the request String editor = user.getIdentifier(); String text = wc.getForm ("TEXT"); boolean moderated = wc.getForm ("MODERATED").equals ("true"); Stri...
52513 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52513/605319fd7c9c909070988d7f972831d7d470f1cd/SavePageAction.java/clean/wiki/src/org/tcdi/opensource/wiki/servlet/SavePageAction.java
int n = Integer.parseInt(args[0]);
public static void main(String args[]) throws IOException { int n = Integer.parseInt(args[0]); HashMap dict = new HashMap(); String word; try { BufferedReader in = new BufferedReader(new FileReader("Usr.Dict.Words")); while ((word = in.readLine()) != null) { dict.put(word, new Integer(1)); } in.clo...
53330 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/53330/eb6c850277407b38bcaefb81155941da0f27b849/spellcheck.java/clean/tests/shootout/java-start/spellcheck.java
public static void main(String args[]) throws IOException { int n = Integer.parseInt(args[0]); HashMap dict = new HashMap(); String word; try { BufferedReader in = new BufferedReader(new FileReader("Usr.Dict.Words")); while ((word = in.readLine()) != null) { dict.put(word, new Integer(1)); } in.clo...
53330 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/53330/eb6c850277407b38bcaefb81155941da0f27b849/spellcheck.java/clean/tests/shootout/java-start/spellcheck.java
if (jid.indexOf("@") == -1) { jid = jid + "@" + item.getTransport().getServiceName(); String nickname = nicknameField.getText(); String group = (String)groupBox.getSelectedItem(); addEntry(jid, nickname, group);
try { jid = Gateway.getJID(transport.getServiceName(), jid);
private void addEntry() { Transport transport = null; AccountItem item = null; if (publicBox.isSelected()) { item = (AccountItem)accounts.getSelectedItem(); transport = item.getTransport(); } if (transport == null) { String jid = jidField.getText()...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/6c0051f92a99737d42226d1e696824d21ec0dcd2/RosterDialog.java/clean/src/java/org/jivesoftware/spark/ui/RosterDialog.java
catch (XMPPException e) { Log.error(e); } String nickname = nicknameField.getText(); String group = (String)groupBox.getSelectedItem(); addEntry(jid, nickname, group);
private void addEntry() { Transport transport = null; AccountItem item = null; if (publicBox.isSelected()) { item = (AccountItem)accounts.getSelectedItem(); transport = item.getTransport(); } if (transport == null) { String jid = jidField.getText()...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/6c0051f92a99737d42226d1e696824d21ec0dcd2/RosterDialog.java/clean/src/java/org/jivesoftware/spark/ui/RosterDialog.java
dropDownButton.addToMenu(closeAllDropDownButtonEntry); dropDownButton.addSeparator();
private void addCloseAllButtons() { winSubMenu.add(closeAllWinSubMenuEntry); winSubMenu.addSeparator(); dropDownButton.addToMenu(closeAllDropDownButtonEntry); dropDownButton.addSeparator(); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/3b273af3a5320ab0a054540f14a3c299ff01de69/TopWindowGroup.java/buggy/SRC/org/openmicroscopy/shoola/env/ui/TopWindowGroup.java
dropDownButton.clearMenu();
private void clearMenus() { winSubMenu.removeAll(); winSubMenu.setEnabled(false); dropDownButton.clearMenu(); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/3b273af3a5320ab0a054540f14a3c299ff01de69/TopWindowGroup.java/buggy/SRC/org/openmicroscopy/shoola/env/ui/TopWindowGroup.java
cfg.dropDownButtonEntry = new JMenuItem();
private WindowConfig makeConfigFor(TopWindow window) { WindowConfig cfg = new WindowConfig(); cfg.winSubMenuEntry = new JMenuItem(); cfg.dropDownButtonEntry = new JMenuItem(); cfg.manager = new TopWindowManager(window, new AbstractButton[] {cfg.winSubMenuEntry, cfg.dropDownButtonEntry}); return cfg; }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/3b273af3a5320ab0a054540f14a3c299ff01de69/TopWindowGroup.java/buggy/SRC/org/openmicroscopy/shoola/env/ui/TopWindowGroup.java
{cfg.winSubMenuEntry, cfg.dropDownButtonEntry});
{cfg.winSubMenuEntry});
private WindowConfig makeConfigFor(TopWindow window) { WindowConfig cfg = new WindowConfig(); cfg.winSubMenuEntry = new JMenuItem(); cfg.dropDownButtonEntry = new JMenuItem(); cfg.manager = new TopWindowManager(window, new AbstractButton[] {cfg.winSubMenuEntry, cfg.dropDownButtonEntry}); return cfg; }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/3b273af3a5320ab0a054540f14a3c299ff01de69/TopWindowGroup.java/buggy/SRC/org/openmicroscopy/shoola/env/ui/TopWindowGroup.java
for(final StatusItem statusItem : statusList){
for (final StatusItem statusItem : statusList) {
public void showPopup(MouseEvent e) { final JPopupMenu popup = new JPopupMenu(); List custom = CustomMessages.load(); if (custom == null) { custom = new ArrayList(); } // Build menu from StatusList for(final StatusItem statusItem : statusList){ final A...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/e752f0dfb9b4ea0239c3ab7e9b003a8e0bddae8b/StatusBar.java/buggy/src/java/org/jivesoftware/spark/ui/status/StatusBar.java
Log.error("Unable to find status item for status - " + text);
public void showPopup(MouseEvent e) { final JPopupMenu popup = new JPopupMenu(); List custom = CustomMessages.load(); if (custom == null) { custom = new ArrayList(); } // Build menu from StatusList for(final StatusItem statusItem : statusList){ final A...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/e752f0dfb9b4ea0239c3ab7e9b003a8e0bddae8b/StatusBar.java/buggy/src/java/org/jivesoftware/spark/ui/status/StatusBar.java
Log.error("Unable to find status item for status - " + text);
public void actionPerformed(ActionEvent actionEvent) { final String text = statusItem.getText(); final StatusItem si = getStatusItem(text); if (si == null) { // Custom status return; ...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/e752f0dfb9b4ea0239c3ab7e9b003a8e0bddae8b/StatusBar.java/buggy/src/java/org/jivesoftware/spark/ui/status/StatusBar.java
Log.error("Unable to find status item for status - " + text);
public void actionPerformed(ActionEvent actionEvent) { final String text = mainStatusItem.getText(); final StatusItem si = getStatusItem(text); if (si == null) { //...
52006 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52006/e752f0dfb9b4ea0239c3ab7e9b003a8e0bddae8b/StatusBar.java/buggy/src/java/org/jivesoftware/spark/ui/status/StatusBar.java
return start + ((int) (1000000.0 * java.lang.Math.random()) % end);
return start + (int) (end *java.lang.Math.random()/(Integer.MAX_VALUE+1.0));
public static final int random(int start, int end) { return start + ((int) (1000000.0 * java.lang.Math.random()) % end); }
52513 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52513/8c85382d96eefe690bc8690df13e9b787c239349/MathTool.java/clean/webmacro/src/org/webmacro/servlet/MathTool.java
protected void enableFilters(Session session) { ownerFilter(session, CategoryGroup.OWNER_FILTER, Category.OWNER_FILTER, Project.OWNER_FILTER, Dataset.OWNER_FILTER ); }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/b0d9b08448464cb80e12bda271a852daf0e5bd6a/PojosLoadHierarchyQueryDefinition.java/clean/components/server/src/ome/services/query/PojosLoadHierarchyQueryDefinition.java
URL groovyJar = new URL("http: systemClassPath.addJarToPath(groovyJar); try { systemClassLoader.loadClass("groovy.lang.GroovyShell"); } catch (ClassNotFoundException e) { fail("Class already exists"); }
public void testAddJarToPath() throws Exception { SystemClassPath systemClassPath = new SystemClassPath(); ClassLoader systemClassLoader = ClassLoader.getSystemClassLoader(); try { systemClassLoader.loadClass("groovy.lang.GroovyShell"); fail("Class already exists"); ...
52533 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52533/438aa707be746e2381b40041b37ebd6b00c23429/SystemClassPathTest.java/clean/classpath/src/test/org/xbean/classpath/SystemClassPathTest.java
r = load(query); if (r != null) { _cache.put(query,r);
synchronized(_writeLocks[ query.hashCode() % _writeLocks.length]) {
public Object get(final String query) throws NotFoundException { TimedReference r; try { r = (TimedReference) _cache.get(query); } catch (NullPointerException e) { throw new NotFoundException(this + " is not initialized", e); } Object o = null; if (r != null) { ...
52513 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52513/f59209b21b5a793aee6286eae87f864f9b9db3e6/CachingProvider.java/buggy/webmacro/src/org/webmacro/resource/CachingProvider.java
try { _log.debug("cached: " + query + " for " + r.getTimeout()); _tl.scheduleTime( new Runnable() { public void run() { _cache.remove(query); _log.debug("cache expired: " + query); } }, r.getTimeout()); } catch (Exception e) { _log.error("CachingProvider caught an exception", e);
if (o == null) { r = load(query); if (r != null) { _cache.put(query,r); } o = r.get(); try { _log.debug("cached: " + query + " for " + r.getTimeout()); _tl.scheduleTime( new Runnable() { public void run() { _cache.remove(query); _log.debug("cache expired: " + query); } }, r.getTimeout()); } catch (Exception e) { _log.e...
public Object get(final String query) throws NotFoundException { TimedReference r; try { r = (TimedReference) _cache.get(query); } catch (NullPointerException e) { throw new NotFoundException(this + " is not initialized", e); } Object o = null; if (r != null) { ...
52513 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52513/f59209b21b5a793aee6286eae87f864f9b9db3e6/CachingProvider.java/buggy/webmacro/src/org/webmacro/resource/CachingProvider.java
_cache.remove(query); _log.debug("cache expired: " + query); }
_cache.remove(query); _log.debug("cache expired: " + query); }
public void run() { _cache.remove(query); _log.debug("cache expired: " + query); }
52513 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52513/f59209b21b5a793aee6286eae87f864f9b9db3e6/CachingProvider.java/buggy/webmacro/src/org/webmacro/resource/CachingProvider.java
_cache = new Hashtable();
_cache = new ScalableMap(1001);
public void init(Broker b, Properties config) throws InitException { _log = b.getLog("resource"); _cache = new Hashtable(); }
52513 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52513/f59209b21b5a793aee6286eae87f864f9b9db3e6/CachingProvider.java/buggy/webmacro/src/org/webmacro/resource/CachingProvider.java
return data.get().isReadyOnly;
return data.get().isReadOnly;
public boolean isReadOnly( ) { return data.get().isReadyOnly; }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/da4ebe56158dd4669ac969c0f1a4e4c8f2c00852/CurrentDetails.java/clean/components/server/src/ome/security/basic/CurrentDetails.java
data.get().isReadyOnly = isReadOnly;
data.get().isReadOnly = isReadOnly;
public void setReadOnly( boolean isReadOnly ) { data.get().isReadyOnly = isReadOnly; }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/da4ebe56158dd4669ac969c0f1a4e4c8f2c00852/CurrentDetails.java/clean/components/server/src/ome/security/basic/CurrentDetails.java
} if (!serviceFactory.isEnabled()) { throw new ServiceRegistrationException(serviceName, new IllegalServiceStateException("A disabled non-restartable service factory can not be registered", serviceName));
public void registerService(ServiceName serviceName, ServiceFactory serviceFactory, ClassLoader classLoader) throws ServiceAlreadyExistsException, ServiceRegistrationException { assert serviceName != null : "serviceName is null"; assert serviceFactory != null : "serviceFactory is null"; assert ...
52533 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/52533/40d54ab7cee698a58def76b8baef5ca243beb305/StandardKernel.java/buggy/kernel/src/java/org/gbean/kernel/standard/StandardKernel.java
id = ((ProjectData) ho).getId();
id = ((CategoryGroupData) ho).getId();
void fireContainerLoading() { if (selectedDisplay == null) return; Object ho = selectedDisplay.getUserObject(); int id = -1; Class nodeType = null; if (ho instanceof ProjectData) { id = ((ProjectData) ho).getId(); nodeType = ProjectData.class; } els...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/571914b456b4ad92dc7b47d4ae4652121bba0f6c/BrowserModel.java/clean/SRC/org/openmicroscopy/shoola/agents/treeviewer/browser/BrowserModel.java
void setFoundNodes(List nodes) { foundNodes = nodes; }
void setFoundNodes(List nodes) { foundNodes = nodes; }
void setFoundNodes(List nodes) { foundNodes = nodes; }
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/571914b456b4ad92dc7b47d4ae4652121bba0f6c/BrowserModel.java/clean/SRC/org/openmicroscopy/shoola/agents/treeviewer/browser/BrowserModel.java
return constructRuby(self,pref,node);
return constructRubyMap(self,pref,node);
public Object call(final Constructor self, final String pref, final Node node) { return constructRuby(self,pref,node); }
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/9d00cc79a2f14fa01aa42e1d438b5fcf7f740845/JRubyConstructor.java/buggy/src/org/jruby/yaml/JRubyConstructor.java
int rows = numRows-1;
private void copyStackAllTimepoints(int from, int to) { int rows = numRows-1; control.copyStackAcrossT(from, to); PlaneArea pa; int z; for (int i = 0; i < rows; i++) { z = rows-i; for (int j = from; j <= to; j++) { pa = control.getPlaneArea(z, j); ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/3db37517e6873d11567ee5822e769ab058e1abed/AssistantDialogMng.java/clean/SRC/org/openmicroscopy/shoola/agents/roi/pane/AssistantDialogMng.java
for (int i = 0; i < rows; i++) { z = rows-i;
for (int i = 0; i < numRows; i++) { z = numRows-i-1;
private void copyStackAllTimepoints(int from, int to) { int rows = numRows-1; control.copyStackAcrossT(from, to); PlaneArea pa; int z; for (int i = 0; i < rows; i++) { z = rows-i; for (int j = from; j <= to; j++) { pa = control.getPlaneArea(z, j); ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/3db37517e6873d11567ee5822e769ab058e1abed/AssistantDialogMng.java/clean/SRC/org/openmicroscopy/shoola/agents/roi/pane/AssistantDialogMng.java
int rows = numRows-1;
int rows = numRows;
private void copyStackEndsTimepoints(int from, int to) { control.copyStack(from, to); int rows = numRows-1; PlaneArea pa; int z; for (int i = 0; i < rows; i++) { z = rows-i; pa = control.getPlaneArea(z, from); setSelectedCell(pa, i, from); setSe...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/3db37517e6873d11567ee5822e769ab058e1abed/AssistantDialogMng.java/clean/SRC/org/openmicroscopy/shoola/agents/roi/pane/AssistantDialogMng.java
z = rows-i;
z = rows-i-1;
private void copyStackEndsTimepoints(int from, int to) { control.copyStack(from, to); int rows = numRows-1; PlaneArea pa; int z; for (int i = 0; i < rows; i++) { z = rows-i; pa = control.getPlaneArea(z, from); setSelectedCell(pa, i, from); setSe...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/3db37517e6873d11567ee5822e769ab058e1abed/AssistantDialogMng.java/clean/SRC/org/openmicroscopy/shoola/agents/roi/pane/AssistantDialogMng.java
view.table.repaint(from*numColumns, 0, to*cellWidth, numRows*cellHeight);
view.table.repaint(from*numColumns, 0, (to-from+1)*cellWidth, numRows*cellHeight);
private void copyStackEndsTimepoints(int from, int to) { control.copyStack(from, to); int rows = numRows-1; PlaneArea pa; int z; for (int i = 0; i < rows; i++) { z = rows-i; pa = control.getPlaneArea(z, from); setSelectedCell(pa, i, from); setSe...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/3db37517e6873d11567ee5822e769ab058e1abed/AssistantDialogMng.java/clean/SRC/org/openmicroscopy/shoola/agents/roi/pane/AssistantDialogMng.java
private void handleSelectionError(String msg) { cancel(); UserNotifier un = control.getRegistry().getUserNotifier(); un.notifyInfo("Invalid selection", msg); //remove the two selected planes. //setSelectedCell(oldRow, oldColumn, false); //setSelectedCell(curRow, curColumn, fals...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/3db37517e6873d11567ee5822e769ab058e1abed/AssistantDialogMng.java/clean/SRC/org/openmicroscopy/shoola/agents/roi/pane/AssistantDialogMng.java
PNode p = (PNode) null;
PPath node = null;
public PNode setToolTipNode(PInputEvent event) { PNode p = (PNode) null; PNode n = event.getInputManager().getMouseOver().getPickedNode(); double scale = camera.getViewScale(); if (scale < ToolTipHandler.SCALE_THRESHOLD) { if (n instanceof ModuleView) { String s = ((ModuleView) n).getModule().getName(); i...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/8ea802385feb43570c0d1f1349c854b7056557f3/ModulePaletteToolTipHandler.java/buggy/SRC/org/openmicroscopy/shoola/agents/chainbuilder/piccolo/ModulePaletteToolTipHandler.java
String s = ((ModuleView) n).getModule().getName(); if (s.compareTo("") != 0) { PText pt = new PText(s);
ModuleView modView = (ModuleView) n; ChainModuleData mod = modView.getModule(); String name = mod.getName(); String desc = mod.getDescription(); if (name.compareTo("") != 0) { PText pt = new PText(name);
public PNode setToolTipNode(PInputEvent event) { PNode p = (PNode) null; PNode n = event.getInputManager().getMouseOver().getPickedNode(); double scale = camera.getViewScale(); if (scale < ToolTipHandler.SCALE_THRESHOLD) { if (n instanceof ModuleView) { String s = ((ModuleView) n).getModule().getName(); i...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/8ea802385feb43570c0d1f1349c854b7056557f3/ModulePaletteToolTipHandler.java/buggy/SRC/org/openmicroscopy/shoola/agents/chainbuilder/piccolo/ModulePaletteToolTipHandler.java
p = pt;
node = new PPath(); node.addChild(pt); pt.setOffset(0,y); pt.setFont(font); y += pt.getHeight(); if (desc != null && desc.compareTo("") != 0 ) { PText p = new PText(desc.trim()); node.addChild(p); p.setFont(descFont); p.setOffset(0,y); y+=p.getHeight(); }
public PNode setToolTipNode(PInputEvent event) { PNode p = (PNode) null; PNode n = event.getInputManager().getMouseOver().getPickedNode(); double scale = camera.getViewScale(); if (scale < ToolTipHandler.SCALE_THRESHOLD) { if (n instanceof ModuleView) { String s = ((ModuleView) n).getModule().getName(); i...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/8ea802385feb43570c0d1f1349c854b7056557f3/ModulePaletteToolTipHandler.java/buggy/SRC/org/openmicroscopy/shoola/agents/chainbuilder/piccolo/ModulePaletteToolTipHandler.java
return p;
if (node != null) { node.setBounds(node.getUnionOfChildrenBounds(null)); node.setStrokePaint(Constants.TOOLTIP_BORDER_COLOR); node.setPaint(Constants.TOOLTIP_FILL_COLOR); } return node;
public PNode setToolTipNode(PInputEvent event) { PNode p = (PNode) null; PNode n = event.getInputManager().getMouseOver().getPickedNode(); double scale = camera.getViewScale(); if (scale < ToolTipHandler.SCALE_THRESHOLD) { if (n instanceof ModuleView) { String s = ((ModuleView) n).getModule().getName(); i...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/8ea802385feb43570c0d1f1349c854b7056557f3/ModulePaletteToolTipHandler.java/buggy/SRC/org/openmicroscopy/shoola/agents/chainbuilder/piccolo/ModulePaletteToolTipHandler.java
return p;
return node;
public PNode setToolTipNode(PInputEvent event) { PNode p = (PNode) null; PNode n = event.getInputManager().getMouseOver().getPickedNode(); double scale = camera.getViewScale(); if (scale < ToolTipHandler.SCALE_THRESHOLD) { if (n instanceof ModuleView) { String s = ((ModuleView) n).getModule().getName(); i...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/8ea802385feb43570c0d1f1349c854b7056557f3/ModulePaletteToolTipHandler.java/buggy/SRC/org/openmicroscopy/shoola/agents/chainbuilder/piccolo/ModulePaletteToolTipHandler.java
objectSpaceModule.defineModuleFunction("_id2ref", callbackFactory.getSingletonMethod("id2ref", RubyFixnum.class));
public static RubyModule createObjectSpaceModule(IRuby runtime) { RubyModule objectSpaceModule = runtime.defineModule("ObjectSpace"); CallbackFactory callbackFactory = runtime.callbackFactory(RubyObjectSpace.class); objectSpaceModule.defineModuleFunction("each_object", callbackFactory.getOptSin...
50661 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/50661/c8b66db475de1dc66f347884891dd70d9943689b/RubyObjectSpace.java/clean/src/org/jruby/RubyObjectSpace.java
"invoked in the DISCARDED, SAVE or LOADING_THUMBNAIL " + "state");
"invoked in the DISCARDED, SAVE state.");
public void onSelectedDisplay() { switch (model.getState()) { case DISCARDED: case SAVE: throw new IllegalStateException("This method cannot be " + "invoked in the DISCARDED, SAVE or LOADING_THUMBNAIL " + "state"); ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/017cdc8ce2d923f32426fc283e7a7463725193d4/TreeViewerComponent.java/clean/SRC/org/openmicroscopy/shoola/agents/treeviewer/view/TreeViewerComponent.java
} else removeEditor();
} else { Browser browser = model.getSelectedBrowser(); if (browser != null) { TreeImageDisplay d = browser.getLastSelectedDisplay(); if (d != null && (d.getUserObject() instanceof ImageData)) { int index = EditorFactory.getEditorSelectedPane(); if (index == Editor.INFO_INDEX) EditorFactory.setEditorSelectedPane( Editor...
public void onSelectedDisplay() { switch (model.getState()) { case DISCARDED: case SAVE: throw new IllegalStateException("This method cannot be " + "invoked in the DISCARDED, SAVE or LOADING_THUMBNAIL " + "state"); ...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/017cdc8ce2d923f32426fc283e7a7463725193d4/TreeViewerComponent.java/clean/SRC/org/openmicroscopy/shoola/agents/treeviewer/view/TreeViewerComponent.java
new QueryParameterDef(OWNER_ID,Long.class,true),
protected void defineParameters(){ defs = new QueryParameterDef[]{ new QueryParameterDef(QP.CLASS,Class.class,false), new QueryParameterDef(QP.IDS,Collection.class,false), new QueryParameterDef(OWNER_ID,Long.class,true), new QueryParameterDef(QP.OPT...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/0b36a8e77f5bacb7e122d76ffce01866205b09d7/PojosLoadHierarchyQueryDefinition.java/buggy/components/server/src/ome/services/query/PojosLoadHierarchyQueryDefinition.java
if (check(OWNER_ID)) { session.enableFilter(Project.OWNER_FILTER) .setParameter(OWNER_ID,value(OWNER_ID));
if (check(QP.OPTIONS) ) { PojoOptions po = new PojoOptions((Map)value(QP.OPTIONS)); if (po.isExperimenter()) { session.enableFilter(Project.OWNER_FILTER) .setParameter(OWNER_ID,po.getExperimenter()); }
protected void enableFilters(Session session) { if (session.getEnabledFilter(Project.OWNER_FILTER) != null) projectOwnerFilterAlreadyEnabled = true; if (check(OWNER_ID)) { session.enableFilter(Project.OWNER_FILTER) .setParameter(OWNER_ID,value(OWNER_ID)...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/0b36a8e77f5bacb7e122d76ffce01866205b09d7/PojosLoadHierarchyQueryDefinition.java/buggy/components/server/src/ome/services/query/PojosLoadHierarchyQueryDefinition.java
int depth = po.isLeaves() ? 2 : 1; fetchChildren(c,Project.class,depth);
int depth = po.isLeaves() ? Integer.MAX_VALUE : 1; Hierarchy.fetchChildren(c,Project.class,depth);
protected Object runQuery(Session session) throws HibernateException, SQLException { PojoOptions po = new PojoOptions((Map) value(QP.OPTIONS)); Criteria c = session.createCriteria((Class)value(QP.CLASS)); c.setResultTransformer(Criteria.DISTINCT_ROOT_ENTITY); c.add(Restriction...
54698 /local/tlutelli/issta_data/temp/all_java5context/java/2006_temp/2006/54698/0b36a8e77f5bacb7e122d76ffce01866205b09d7/PojosLoadHierarchyQueryDefinition.java/buggy/components/server/src/ome/services/query/PojosLoadHierarchyQueryDefinition.java