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8aea526 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 | Unnamed: 0,Gene symbol,Ranking,Annotation & reasoning,Additional note,Data Source,Gene Symbol
0,TCL1A,1-50,B cell,,"""Identification and multimodal characterization of a specialized epithelial cell type associated with Crohn’s disease"", CD samples collected from terminal ileum (TI) and ascending colon (AC) through endoscopy and surgical",TCL1A
1,MS4A1,1-50,B cell,,,MS4A1
2,CD79A,1-50,B cell,,,CD79A
3,BLK,50-100,B cell,,,BLK
4,FCRL1,50-100,B cell,,,FCRL1
5,PAX5,50-100,B cell,,,PAX5
6,TNFRSF13C,50-100,B cell,,,TNFRSF13C
7,CNR2,50-100,B cell,,,CNR2
8,CD22,50-100,B cell,Mast,,CD22
9,FAM129C,100-150,B cell,,,FAM129C
10,VPREB3,100-150,B cell,,,VPREB3
11,BEST4,1-50,BEST4,Canonical marker,,BEST4
12,CA7,1-50,BEST4,Canonical marker,,CA7
13,OTOP2,1-50,BEST4,Canonical marker,,OTOP2
14,CA4,50-100,BEST4,Co-exp with CA7,,CA4
15,NBPF19,50-100,BEST4,,,NBPF19
16,NBPF14,50-100,BEST4,,,NBPF14
17,MEIS1,100-150,BEST4,,,MEIS1
18,ADCY5,100-150,BEST4,,,ADCY5
19,SPIB,100-150,BEST4,,,SPIB
20,AQP8,1-50,Clonocyte,,,AQP8
21,CEACAM1,1-50,Clonocyte,,,CEACAM1
22,AQP8,1-50,Colonocyte,,,AQP8
23,CA2,50-100,Colonocyte,Multiple cell types,,CA2
24,CA1,50-100,Colonocyte,,,CA1
25,HMGCS2,50-100,Colonocyte,Multiple cell types,,HMGCS2
26,CD24,50-100,Colonocyte,Multiple cell types,,CD24
27,MS4A12,100-150,Colonocyte,,,MS4A12
28,SLC37A2,100-150,Colonocyte,,,SLC37A2
29,CEACAM7,100-150,Colonocyte,,,CEACAM7
30,SLC26A2,100-150,Colonocyte,,,SLC26A2
31,TOP2A,1-50,Cycling,,,TOP2A
32,MKI67,1-50,Cycling,,,MKI67
33,HMGB2,50-100,Cycling,,,HMGB2
34,OLFM4,1-50,Cycling/Stem,,,OLFM4
35,CENPF,50-100,Cycling/Stem,,,CENPF
36,PRC1,50-100,Cycling/Stem,,,PRC1
37,CCNB2,50-100,Cycling/Stem,,,CCNB2
38,AURKB,100-150,Cycling/Stem,,,AURKB
39,GTSE1,100-150,Cycling/Stem,,,GTSE1
40,RRM2,100-150,Cycling/Stem,,,RRM2
41,CHGB,1-50,EEC,,,CHGB
42,CHGA,1-50,EEC,,,CHGA
43,PCSK1N,50-100,EEC,,,PCSK1N
44,KCNB2,50-100,EEC,,,KCNB2
45,NEUROD1,50-100,EEC,,,NEUROD1
46,FEV,100-150,EEC,,,FEV
47,SCG2,100-150,EEC,,,SCG2
48,SSTR5-AS1,100-150,EEC,,,SSTR5-AS1
49,ACKR1,1-50,Endo,Vein,,ACKR1
50,VWF,1-50,Endo,Cannonical endo marker,,VWF
51,PECAM1,1-50,Endo,Canonical marker,,PECAM1
52,CLDN5,50-100,Endo,,,CLDN5
53,SOX18,50-100,Endo,,,SOX18
54,RAMP3,50-100,Endo,,,RAMP3
55,RAMP2,50-100,Endo,,,RAMP2
56,CLEC14A,100-150,Endo,,,CLEC14A
57,TIE1,100-150,Endo,,,TIE1
58,APOB,1-50,Enterocyte,Multiple cell types,,APOB
59,APOA4,1-50,Enterocyte,Multiple cell types,,APOA4
60,APOA1,1-50,Enterocyte,,,APOA1
61,SLC15A1,50-100,Enterocyte,,,SLC15A1
62,SLC6A19,50-100,Enterocyte,,,SLC6A19
63,CYP3A4,100-150,Enterocyte,,,CYP3A4
64,MTTP,100-150,Enterocyte,,,MTTP
65,CUBN,100-150,Enterocyte,,,CUBN
66,SLC10A2,100-150,Enterocyte,,,SLC10A2
67,SLC7A9,100-150,Enterocyte,,,SLC7A9
68,FABP1,1-50,Epi,Multiple cell types,,FABP1
69,COL1A2,1-50,Fibro,"Canonical marker, high expression",,COL1A2
70,COL1A1,1-50,Fibro,"Canonical marker, high expression",,COL1A1
71,DCN,1-50,Fibro,"Canonical marker, high expression",,DCN
72,COL3A1,50-100,Fibro,,,COL3A1
73,PDGFRA,50-100,Fibro,,,PDGFRA
74,MFAP4,50-100,Fibro,,,MFAP4
75,SFRP2,50-100,Fibro,,,SFRP2
76,C1R,100-150,Fibro,,,C1R
77,TFF3,1-50,Goblet,"Canonical marker, high expression",,TFF3
78,MUC2,1-50,Goblet,"Canonical marker, high expression",,MUC2
79,SPINK4,1-50,Goblet,,,SPINK4
80,ITLN1,50-100,Goblet,,,ITLN1
81,CLCA1,50-100,Goblet,,,CLCA1
82,FCGBP,50-100,Goblet,,,FCGBP
83,BEST2,100-150,Goblet,,,BEST2
84,DUOX2,1-50,LND,Important cell state in disease,,DUOX2
85,LCN2,1-50,LND,Important cell state in disease,,LCN2
86,DMBT1,1-50,LND,Important cell state in disease,,DMBT1
87,REG1A,1-50,LND,Important cell state in disease,,REG1A
88,SAA1,50-100,LND,,,SAA1
89,NOS2,50-100,LND,,,NOS2
90,PI3,100-150,LND,,,PI3
91,PDZK1IP1,100-150,LND,,,PDZK1IP1
92,CD55,100-150,LND,,,CD55
93,CPA3,1-50,Mast,,,CPA3
94,KIT,1-50,Mast,,,KIT
95,CTSG,50-100,Mast,,,CTSG
96,GATA2,50-100,Mast,,,GATA2
97,TPSAB1,50-100,Mast,,,TPSAB1
98,TPSB2,50-100,Mast,,,TPSB2
99,MS4A2,100-150,Mast,,,MS4A2
100,HDC,100-150,Mast,,,HDC
101,C1QA,1-50,Myel,"Canonical myeloid marker, too high expression",,C1QA
102,C1QB,1-50,Myel,Canonical myeloid marker,,C1QB
103,C1QC,50-100,Myel,Canonical myeloid marker; co-express with C1QA and C1QB,,C1QC
104,CSF3R,50-100,Myel,,,CSF3R
105,FPR1,100-150,Myel,,,FPR1
106,MS4A6A,100-150,Myel,,,MS4A6A
107,TYROBP,100-150,Myel,,,TYROBP
108,AIF1,100-150,Myel,,,AIF1
109,MS4A7,100-150,Myel,,,MS4A7
110,CSF2RA,100-150,Myel,,,CSF2RA
111,S100A8,1-50,Neutrophils,,,S100A8
112,S100A9,1-50,Neutrophils,,,S100A9
113,NKG7,1-50,NK,,,NKG7
114,DEFA6,1-50,Paneth,,,DEFA6
115,DEFA5,50-100,Paneth,,,DEFA5
116,ITLN2,100-150,Paneth,,,ITLN2
117,PLA2G2A,100-150,Paneth,,,PLA2G2A
118,CDKN1C,100-150,Paneth,,,CDKN1C
119,IGHA1,1-50,PCs,,,IGHA1
120,JCHAIN,1-50,PCs,,,JCHAIN
121,IGHA2,1-50,PCs,,,IGHA2
122,IGKC,50-100,PCs,"Canonical marker, multiple cell types, too high expression",,IGKC
123,CCR10,50-100,PCs,,,CCR10
124,MZB1,50-100,PCs,,,MZB1
125,DERL3,100-150,PCs,,,DERL3
126,TNFRSF17,100-150,PCs,,,TNFRSF17
127,AC096579.15,100-150,PCs,,,AC096579.15
128,ENAM,100-150,PCs,,,ENAM
129,LGR5,1-50,Stem,,,LGR5
130,CD3D,1-50,T,,,CD3D
131,CD8A,1-50,T,,,CD8A
132,TRAC,1-50,T,,,TRAC
133,FOXP3,1-50,T,Tregs,,FOXP3
134,CTLA4,1-50,T,,,CTLA4
135,GZMB,1-50,T,T-cyto,,GZMB
136,CD4,50-100,T,,,CD4
137,CCL5,50-100,T,,,CCL5
138,CD3E,50-100,T,,,CD3E
139,CD247,100-150,T,,,CD247
140,TRBC1,100-150,T,,,TRBC1
141,AC092580.4,100-150,T,,,AC092580.4
142,CD96,100-150,T,,,CD96
143,LRMP,1-50,Tuft,,,LRMP
144,POU2F3,50-100,Tuft,,,POU2F3
145,HPGDS,50-100,Tuft,,,HPGDS
146,SH2D6,100-150,Tuft,,,SH2D6
147,CCDC129,100-150,Tuft,,,CCDC129
148,SH2D7,100-150,Tuft,,,SH2D7
149,PTGS1,100-150,Tuft,,,PTGS1
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