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8aea526 | 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 | Unnamed: 0.1,Unnamed: 0,Gene.Symbol,Ranking,Annotation...reasoning,Additional.note,Gene Symbol
0,1,FSTL4,1-50,More distinct marker than L5,markers ranked with cohen mean,FSTL4
1,2,SATB2,1-50,abundant marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean,SATB2
2,3,KCNIP4,1-50,abundant marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean,KCNIP4
3,4,TAFA1,1-50,abundant marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean,TAFA1
4,5,VAT1L,1-50,abundant marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean,VAT1L
5,6,CBLN2,1-50,abundant marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean,CBLN2
6,7,ARPP21,1-50,abundant marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean,ARPP21
7,8,RAD52,1-50,abundant marker for astrocyte of the cerebral cortex,markers ranked with cohen mean,RAD52
8,9,PDK4,1-50,abundant marker for astrocyte of the cerebral cortex,markers ranked with cohen mean,PDK4
9,10,SEMA3B,1-50,abundant marker for astrocyte of the cerebral cortex,markers ranked with cohen mean,SEMA3B
10,11,ADARB2,1-50,abundant marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean,ADARB2
11,12,SORCS3,1-50,abundant marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean,SORCS3
12,13,CXCL14,1-50,abundant marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean,CXCL14
13,14,MAD1L1,1-50,abundant marker for cerebral cortex endothelial cell,markers ranked with cohen mean,MAD1L1
14,15,CYP26B1,1-50,abundant marker for cerebral cortex endothelial cell,markers ranked with cohen mean,CYP26B1
15,16,CASP10,1-50,abundant marker for cerebral cortex endothelial cell,markers ranked with cohen mean,CASP10
16,17,ZNF536,1-50,abundant marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean,ZNF536
17,18,ZNF385D,1-50,abundant marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean,ZNF385D
18,19,THSD7A,1-50,abundant marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean,THSD7A
19,20,SEMA3E,1-50,abundant marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean,SEMA3E
20,21,EGFEM1P,1-50,abundant marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean,EGFEM1P
21,22,LAMP5,1-50,abundant marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean,LAMP5
22,23,FGF13,1-50,abundant marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean,FGF13
23,24,C1orf112,1-50,abundant marker for microglial cell,markers ranked with cohen mean,C1orf112
24,25,CEACAM21,1-50,abundant marker for microglial cell,markers ranked with cohen mean,CEACAM21
25,26,TYROBP,1-50,abundant marker for microglial cell,markers ranked with cohen mean,TYROBP
26,27,TSHZ2,1-50,abundant marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean,TSHZ2
27,28,HTR2C,1-50,abundant marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean,HTR2C
28,29,GCFC2,1-50,abundant marker for oligodendrocyte,markers ranked with cohen mean,GCFC2
29,30,LAMP2,1-50,abundant marker for oligodendrocyte,markers ranked with cohen mean,LAMP2
30,31,TMEM98,1-50,abundant marker for oligodendrocyte,markers ranked with cohen mean,TMEM98
31,32,HECW1,1-50,abundant marker for oligodendrocyte precursor cell,markers ranked with cohen mean,HECW1
32,33,KLHL13,1-50,abundant marker for oligodendrocyte precursor cell,markers ranked with cohen mean,KLHL13
33,34,ATP1A2,1-50,abundant marker for oligodendrocyte precursor cell,markers ranked with cohen mean,ATP1A2
34,35,ABTB3,1-50,abundant marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean,ABTB3
35,36,GCLC,1-50,abundant marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean,GCLC
36,37,HCCS,1-50,abundant marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean,HCCS
37,38,DPEP1,1-50,abundant marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean,DPEP1
38,39,SST,1-50,abundant marker for sst GABAergic cortical interneuron,markers ranked with cohen mean,SST
39,40,GRIK1,1-50,abundant marker for sst GABAergic cortical interneuron,markers ranked with cohen mean,GRIK1
40,41,SYNPR,1-50,abundant marker for sst GABAergic cortical interneuron,markers ranked with cohen mean,SYNPR
41,42,ATP1A2,1-50,abundant marker for vascular leptomeningeal cell,markers ranked with cohen mean,ATP1A2
42,43,EBF1,1-50,abundant marker for vascular leptomeningeal cell,markers ranked with cohen mean,EBF1
43,44,PDGFRB,1-50,abundant marker for vascular leptomeningeal cell,markers ranked with cohen mean,PDGFRB
44,45,VIP,1-50,abundant marker for vip GABAergic cortical interneuron,markers ranked with cohen mean,VIP
45,46,GALNTL6,1-50,abundant marker for vip GABAergic cortical interneuron,markers ranked with cohen mean,GALNTL6
46,47,CX3CR1,1-50,abundant marker for microglial cell,Known Marker,CX3CR1
47,48,DLGAP2,50-100,Less specific marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean,DLGAP2
48,49,STXBP5L,50-100,Less specific marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean,STXBP5L
49,50,CHRM3,50-100,Less specific marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean,CHRM3
50,51,NRGN,50-100,Less specific marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean,NRGN
51,52,PDE1A,50-100,Less specific marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean,PDE1A
52,53,RALYL,50-100,Less specific marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean,RALYL
53,54,PTPRR,50-100,Less specific marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean,PTPRR
54,55,MARCHF1,50-100,Less specific marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean,MARCHF1
55,56,NKX2-2,50-100,Less specific marker for astrocyte of the cerebral cortex,markers ranked with cohen mean,NKX2-2
56,57,OBI1-AS1,50-100,Less specific marker for astrocyte of the cerebral cortex,markers ranked with cohen mean,OBI1-AS1
57,58,CRACD,50-100,Less specific marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean,CRACD
58,59,MYO16,50-100,Less specific marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean,MYO16
59,60,CACNA1B,50-100,Less specific marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean,CACNA1B
60,61,ID3,50-100,Less specific marker for cerebral cortex endothelial cell,markers ranked with cohen mean,ID3
61,62,TBX3,50-100,Less specific marker for cerebral cortex endothelial cell,markers ranked with cohen mean,TBX3
62,63,PLXND1,50-100,Less specific marker for cerebral cortex endothelial cell,markers ranked with cohen mean,PLXND1
63,64,TMEM132D,50-100,Less specific marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean,TMEM132D
64,65,TENM1,50-100,Less specific marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean,TENM1
65,66,SDK1,50-100,Less specific marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean,SDK1
66,67,CLSTN2,50-100,Less specific marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean,CLSTN2
67,68,RYR2,50-100,Less specific marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean,RYR2
68,69,NRG1,50-100,Less specific marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean,NRG1
69,70,NYAP2,50-100,Less specific marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean,NYAP2
70,71,MTUS2,50-100,Less specific marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean,MTUS2
71,72,LINC00299,50-100,Less specific marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean,LINC00299
72,73,APBB1IP,50-100,Less specific marker for microglial cell,markers ranked with cohen mean,APBB1IP
73,74,SH3BP2,50-100,Less specific marker for microglial cell,markers ranked with cohen mean,SH3BP2
74,75,C1QC,50-100,Less specific marker for microglial cell,markers ranked with cohen mean,C1QC
75,76,FOXP2,50-100,Less specific marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean,FOXP2
76,77,CHN2,50-100,Less specific marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean,CHN2
77,78,MED24,50-100,Less specific marker for oligodendrocyte,markers ranked with cohen mean,MED24
78,79,DAPK2,50-100,Less specific marker for oligodendrocyte,markers ranked with cohen mean,DAPK2
79,80,BCAS1,50-100,Less specific marker for oligodendrocyte,markers ranked with cohen mean,BCAS1
80,81,CTNS,50-100,Less specific marker for oligodendrocyte precursor cell,markers ranked with cohen mean,CTNS
81,82,BCAS1,50-100,Less specific marker for oligodendrocyte precursor cell,markers ranked with cohen mean,BCAS1
82,83,SOX6,50-100,Less specific marker for oligodendrocyte precursor cell,markers ranked with cohen mean,SOX6
83,84,ADAMTS17,50-100,Less specific marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean,ADAMTS17
84,85,FGF12,50-100,Less specific marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean,FGF12
85,86,GRIP1,50-100,Less specific marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean,GRIP1
86,87,KMO,50-100,Less specific marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean,KMO
87,88,KCNK17,50-100,Less specific marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean,KCNK17
88,89,STXBP6,50-100,Less specific marker for sst GABAergic cortical interneuron,markers ranked with cohen mean,STXBP6
89,90,CDH9,50-100,Less specific marker for sst GABAergic cortical interneuron,markers ranked with cohen mean,CDH9
90,91,ELAVL2,50-100,Less specific marker for sst GABAergic cortical interneuron,markers ranked with cohen mean,ELAVL2
91,92,UTRN,50-100,Less specific marker for vascular leptomeningeal cell,markers ranked with cohen mean,UTRN
92,93,CALD1,50-100,Less specific marker for vascular leptomeningeal cell,markers ranked with cohen mean,CALD1
93,94,LAMA2,50-100,Less specific marker for vascular leptomeningeal cell,markers ranked with cohen mean,LAMA2
94,95,GALNT13,50-100,Less specific marker for vip GABAergic cortical interneuron,markers ranked with cohen mean,GALNT13
95,96,SNTG1,50-100,Less specific marker for vip GABAergic cortical interneuron,markers ranked with cohen mean,SNTG1
96,97,LINC01480,100-150,de-enriched marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean,LINC01480
97,98,AIF1,100-150,de-enriched marker for L2/3-6 intratelencephalic projecting glutamatergic neuron,markers ranked with cohen mean,AIF1
98,99,MGC16275,100-150,de-enriched marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean,MGC16275
99,100,SALL3,100-150,de-enriched marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean,SALL3
100,101,FMO6P,100-150,de-enriched marker for L5 extratelencephalic projecting glutamatergic cortical neuron,markers ranked with cohen mean,FMO6P
101,102,GPRC5B,100-150,de-enriched marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean,GPRC5B
102,103,SEMA6A,100-150,de-enriched marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean,SEMA6A
103,104,CAPN2,100-150,de-enriched marker for L6b glutamatergic cortical neuron,markers ranked with cohen mean,CAPN2
104,105,IL1RAPL1,100-150,de-enriched marker for astrocyte of the cerebral cortex,markers ranked with cohen mean,IL1RAPL1
105,106,DSCAM,100-150,de-enriched marker for astrocyte of the cerebral cortex,markers ranked with cohen mean,DSCAM
106,107,PPP1R13L,100-150,de-enriched marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean,PPP1R13L
107,108,INPPL1,100-150,de-enriched marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean,INPPL1
108,109,EXPH5,100-150,de-enriched marker for caudal ganglionic eminence derived GABAergic cortical interneuron,markers ranked with cohen mean,EXPH5
109,110,NCAM1,100-150,de-enriched marker for cerebral cortex endothelial cell,markers ranked with cohen mean,NCAM1
110,111,GABRG3,100-150,de-enriched marker for cerebral cortex endothelial cell,markers ranked with cohen mean,GABRG3
111,112,VRK2,100-150,de-enriched marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean,VRK2
112,113,TRPM3,100-150,de-enriched marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean,TRPM3
113,114,CSGALNACT1,100-150,de-enriched marker for chandelier pvalb GABAergic cortical interneuron,markers ranked with cohen mean,CSGALNACT1
114,115,RND3,100-150,de-enriched marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean,RND3
115,116,NOTCH2NLA,100-150,de-enriched marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean,NOTCH2NLA
116,117,EGFR,100-150,de-enriched marker for corticothalamic-projecting glutamatergic cortical neuron,markers ranked with cohen mean,EGFR
117,118,DKKL1,100-150,de-enriched marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean,DKKL1
118,119,TNFSF10,100-150,de-enriched marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean,TNFSF10
119,120,TRIB1,100-150,de-enriched marker for lamp5 GABAergic cortical interneuron,markers ranked with cohen mean,TRIB1
120,121,DOK6,100-150,de-enriched marker for microglial cell,markers ranked with cohen mean,DOK6
121,122,METTL6,100-150,de-enriched marker for microglial cell,markers ranked with cohen mean,METTL6
122,123,TRIM16,100-150,de-enriched marker for microglial cell,markers ranked with cohen mean,TRIM16
123,124,HMOX1,100-150,de-enriched marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean,HMOX1
124,125,ETS1,100-150,de-enriched marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean,ETS1
125,126,HERC2P4,100-150,de-enriched marker for near-projecting glutamatergic cortical neuron,markers ranked with cohen mean,HERC2P4
126,127,MYO1F,100-150,de-enriched marker for oligodendrocyte,markers ranked with cohen mean,MYO1F
127,128,GASK1B,100-150,de-enriched marker for oligodendrocyte,markers ranked with cohen mean,GASK1B
128,129,RTCB,100-150,de-enriched marker for oligodendrocyte,markers ranked with cohen mean,RTCB
129,130,RBFOX3,100-150,de-enriched marker for oligodendrocyte precursor cell,markers ranked with cohen mean,RBFOX3
130,131,TMEM119,100-150,de-enriched marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean,TMEM119
131,132,CAVIN2,100-150,de-enriched marker for pvalb GABAergic cortical interneuron,markers ranked with cohen mean,CAVIN2
132,133,GBGT1,100-150,de-enriched marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean,GBGT1
133,134,IL6ST,100-150,de-enriched marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean,IL6ST
134,135,SFMBT2,100-150,de-enriched marker for sncg GABAergic cortical interneuron,markers ranked with cohen mean,SFMBT2
135,136,HS3ST6,100-150,de-enriched marker for sst GABAergic cortical interneuron,markers ranked with cohen mean,HS3ST6
136,137,EPHA2,100-150,de-enriched marker for sst GABAergic cortical interneuron,markers ranked with cohen mean,EPHA2
137,138,CHST3,100-150,de-enriched marker for sst GABAergic cortical interneuron,markers ranked with cohen mean,CHST3
138,139,CNIH3,100-150,de-enriched marker for vascular leptomeningeal cell,markers ranked with cohen mean,CNIH3
139,140,AGTPBP1,100-150,de-enriched marker for vascular leptomeningeal cell,markers ranked with cohen mean,AGTPBP1
140,141,AFDN,100-150,de-enriched marker for vascular leptomeningeal cell,markers ranked with cohen mean,AFDN
141,142,MOBP,100-150,de-enriched marker for vip GABAergic cortical interneuron,markers ranked with cohen mean,MOBP
142,143,LINC01094,100-150,de-enriched marker for vip GABAergic cortical interneuron,markers ranked with cohen mean,LINC01094
143,144,SAMD9L,100-150,de-enriched marker for vip GABAergic cortical interneuron,markers ranked with cohen mean,SAMD9L
144,145,ALDH1L1,1-50,known marker gene for astrocyte of the cerebral cortex,sourced from prior knowledge,ALDH1L1
145,146,MBP,50-100,known marker gene for oligodendrocyte,sourced from prior knowledge,MBP
146,147,GFAP,50-100,known marker gene for astrocyte,sourced from prior knowledge,GFAP
147,148,AQP4,1-50,known marker gene for astrocyte,sourced from prior knowledge,AQP4
148,149,PVALB,50-100,spcific marker for pvalb interneurons,sourced from prior knowledge,PVALB
149,150,SST,1-50,known marker gene SST interneurons,sourced from prior knowledge,SST
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