| gene_name,annotation,top_50,top_100,top_150 |
| ADGRV1,DE in astrocyte in reference dataset,1,1,1 |
| SLC1A3,astrocyte marker literature,1,1,1 |
| SLC1A2,astrocyte marker literature,1,1,1 |
| CDH20,"DE in Oligo, OPC, astrocyte in reference dataset",1,1,1 |
| PTPRZ1,DE in OPC and astrocytesin reference dataset,1,1,1 |
| ST18,DE in Oligodendrocyte in reference dataset,1,1,1 |
| MBP,Oligodendrocyte marker / gene linked with methylation,1,1,1 |
| PTGDS,oligodendrocyte subtype marker in literature,1,1,1 |
| SST,marker of sstGABAergic cortinal interneuron,1,1,1 |
| GAD1,GABAergin neuronal maker,1,1,1 |
| GAD2,GABAergin neuronal maker,1,1,1 |
| ADARB2,GABAergic neurons marker,1,1,1 |
| SOX6,"DE in reference dataset: sstGABAnergic, pvalb GABAnergic neurons, OPC, astrocyte DE",1,1,1 |
| SATB2,glutaminergic neuronal marker + DE in dataset,1,1,1 |
| HS3ST4,glutaminergic neuronal marker + DE in dataset,1,1,1 |
| TSHZ2,cortical neuron marker,1,1,1 |
| RTN1,broad neuronal marker,1,1,1 |
| NFIB,marker of several GABAergic neurons,1,1,1 |
| MAP2,mature neuronal marker,1,1,1 |
| LHFPL3,DE in OPC in reference dataset,1,1,1 |
| DSCAM,DE in OPC and vip-GAB in referece,1,1,1 |
| CTNNA3,DE in oligo in reference dataset,1,1,1 |
| EGFR,"GABAergic cortinal interneuron, literature + DE in reference dataset",1,1,1 |
| NXPH2,Marker of GABAergic + DE in GABAergic cortinal interneuron in reference,1,1,1 |
| CUX2,DE expressed in neurons reference dataset,1,1,1 |
| RXFP1,glutaminergic neuronal marker + DE in dataset,1,1,1 |
| KCNIP4,interneuron and OPC + DE in reference dataset,1,1,1 |
| MEF2C,Marker of glutamatergic neurons,1,1,1 |
| CHL1,Marker of neuroplasticity/neurotropic,1,1,1 |
| GRIK4,gene involved in synaptic signaling,1,1,1 |
| GRIN2B,gene involved in synaptic signaling,1,1,1 |
| PLP1,genes linked to myelination,1,1,1 |
| SYT1,genes linked to calcium/calmodulin pathways,1,1,1 |
| ATP2B2,gene linked to metabolic alteratsion,1,1,1 |
| ATP1B1,gene linked to metabolic alteratsion,1,1,1 |
| SYNDIG1,microglia marker gene in lit + DE in ref data,1,1,1 |
| HSP90AA1,microglial subtype marker,1,1,1 |
| ETV5,astrocyte suptype marker,1,1,1 |
| STMN2,broad neuronal markers,1,1,1 |
| KCNJ6,Dopaminergic neuron marker,1,1,1 |
| UNC13C,GABAergic neuron marker,1,1,1 |
| ITM2B,gene linked to B-amyloid aggregation,1,1,1 |
| GRIA1,gene linked to glutamate transport,1,1,1 |
| GRIA2,gene linked to glutamate transport,1,1,1 |
| CAMK2A,gene linked to neurotransmitter pathways,1,1,1 |
| CALM2,genes linked to calcium/calmodulin pathways,1,1,1 |
| CAMK4,genes linked to calcium/calmodulin pathways,1,1,1 |
| FYN,genes linked to inflammation/immune response,1,1,1 |
| CALM1,genes linked to calcium/calmodulin pathways,1,1,1 |
| ATP1A1,gene linked to metabolic alteratsion,1,1,1 |
| P2RY12,homeostatic microglial gene,0,1,1 |
| P2RY12,activated microglial makers,0,1,1 |
| FGFR3,astrocyte marker literature,0,1,1 |
| PDGFRA,OPC maker + DE in reference dataset,0,1,1 |
| OPALIN,oligodendrocyte marker in literature + DE in reference dataset,0,1,1 |
| MOG,mature oligodendrocyte marker,0,1,1 |
| VIP,marker of vip GABAergic cortinal interneuron,0,1,1 |
| PROX1,GABAergic cortinal interneuron marker + DE,0,1,1 |
| SULF1,subtypes of glutaminergic neuronal also DE in dataset,0,1,1 |
| GLUL,astrocyte marker literature,0,1,1 |
| MERTK,astrocyte suptype marker from lit,0,1,1 |
| SIRT2,cell cycle genes,0,1,1 |
| RGS5,pericyte marker,0,1,1 |
| LHX6,"GABAergic cortinal interneuron, lit, DE",0,1,1 |
| SLC17A7,glutamatergic neuron,0,1,1 |
| ATP1A2,gene linked to metabolic alteratsion,0,1,1 |
| BIN1,microglia marker,0,1,1 |
| NFKB1,inflammatory microglial marker gene,0,1,1 |
| HIF1A,microglial subtype marker,0,1,1 |
| LAMP1,expressed in some microglia,0,1,1 |
| ATP1B2,astrocyte marker literature,0,1,1 |
| HOPX,oligodendrocyte subtype marker in literature,0,1,1 |
| NEFL,neuronal marker,0,1,1 |
| APOE,linked to B-amyloid aggregation,0,1,1 |
| CST3,linked to B-amyloid aggregation,0,1,1 |
| SET,gene associated with neuroplasticity/neurotropic,0,1,1 |
| PCP4,gene associated with neuroplasticity/neurotropic,0,1,1 |
| PTPRN,gene associated with cell-cell signaling,0,1,1 |
| PIK3CA,gene associated with cell migration,0,1,1 |
| CPLX2,gene associated with synaptic signaling,0,1,1 |
| NDUFA4,gene linked to metabolic alteratsion,0,1,1 |
| ATP5F1D,gene linked to metabolic alteratsion,0,1,1 |
| MDH1,gene linked to metabolic alteratsion,0,1,1 |
| COX4I1,gene linked to metabolic alteratsion,0,1,1 |
| NCAN,gene associated with biosynthesis,0,1,1 |
| RPL15,gene associated with biosynthesis,0,1,1 |
| PSMC6,gene associated with proteosome,0,1,1 |
| PSMA1,gene associated with proteosome,0,1,1 |
| MAPT,mature neuronal marker,0,1,1 |
| ITM2C,linked to B-amyloid aggregation,0,1,1 |
| APBB1,linked to B-amyloid aggregation,0,1,1 |
| WASL,gene associated with cell migration,0,1,1 |
| ARPC3,gene associated with cell migration,0,1,1 |
| SCN1B,gene associated with synaptic signaling,0,1,1 |
| PRKCG,gene associated with neurotransmitter pathways,0,1,1 |
| NDUFV3,gene linked to metabolic alteratsion,0,1,1 |
| ATP5F1B,gene linked to metabolic alteratsion,0,1,1 |
| ATP5F1A,gene linked to metabolic alteratsion,0,1,1 |
| MRPL57,gene associated with biosynthesis,0,1,1 |
| EEF1A2,gene associated with biosynthesis,0,1,1 |
| FARSB,gene associated with biosynthesis,0,1,1 |
| BLNK,microglia DE preivous paper + DE in ref data,0,0,1 |
| MRC1,"activated microglial makers in literature, DE in reference dataset",0,0,1 |
| CD14,"microglia marked in literature, DE in reference dataset",0,0,1 |
| CX3CR1,homeostatic microglial gene,0,0,1 |
| CD74,microglia marker,0,0,1 |
| SPI1,microglia marker,0,0,1 |
| C1QB,microglia marker,0,0,1 |
| GFAP,"astrocyte marker in literature, DE in reference dataset",0,0,1 |
| AQP4,"astrocyte marker in literature, DE in reference dataset",0,0,1 |
| AGT,astrocyte marker literature,0,0,1 |
| GJB6,astrocyte marker literature,0,0,1 |
| SOX10,oligodendrocyte marker in literature,0,0,1 |
| OLIG1,oligodendrocyte marker in literature,0,0,1 |
| OLIG2,oligodendrocyte marker in literature,0,0,1 |
| MAG,Myelinating Oligodendrocyte Markers,0,0,1 |
| KLK6,oligodendrocyte subtype marker in literature,0,0,1 |
| ASPA,mature oligodendrocyte marker,0,0,1 |
| ITM2A,endothelial marker lit,0,0,1 |
| PCNA,cell cycle genes,0,0,1 |
| MCM6,cell cycle genes,0,0,1 |
| ACTA2,pericyte marker,0,0,1 |
| PVALB,marker of pvalb GABAergic cortinal interneuron,0,0,1 |
| LAMP5,marker of lamp5 GABAergic cortical interneuron,0,0,1 |
| CALB2,"vip GABAergic cortinal interneuron, literature + DE in reference dataset",0,0,1 |
| SNCG,projecting glutaminergic cortical,0,0,1 |
| SYT6,DE in microglia in reference dataset,0,0,1 |
| SOX9,astrocyte marker literature,0,0,1 |
| SLC7A10,neural stem cells marker /astrocyte suptype marker from lit,0,0,1 |
| ID3,astrocyte suptype marker from lit,0,0,1 |
| WFS1,astrocyte suptype marker from lit,0,0,1 |
| FAM107A,astrocyte suptype marker from lit,0,0,1 |
| ZNF488,mature oligodendrocyte marker,0,0,1 |
| CHRNA2,"vip GABAergic cortinal interneuron, literature + DE in reference dataset",0,0,1 |
| PTPRC,immune marker,0,0,1 |
| CEBPB,senescent microglia marker,0,0,1 |
| NLRP3,,0,0,1 |
| CHODL,"oligodendrocyte marker in literature, DE in reference dataset",0,0,1 |
| ANXA5,oligodendrocyte subtype marker in literature,0,0,1 |
| OTOF,"sstGABAergic cortinal interneuron, lit, DE",0,0,1 |
| MAL,genes linked to myelination,0,0,1 |
| PRKX,genes linked to inflammation/immune response,0,0,1 |
| FRZB,astrocyte suptype marker from lit,0,0,1 |
| S100B,astrocyte marker literature,0,0,1 |
| NPY,Cell-cell signaling,0,0,1 |
| PCDH8,Cell-cell signaling,0,0,1 |
| TSPAN2,genes linked to myelination,0,0,1 |
| COX8A,gene linked to metabolic alteratsion,0,0,1 |
| RPN1,Proteosome,0,0,1 |
| RELB,inflammatory microglial marker gene,0,0,1 |
| NDUFS7,gene linked to metabolic alteratsion,0,0,1 |
|
|
