README.md

metadata

license: mit
task_categories:
  - text-generation
language:
  - en
tags:
  - medical
  - biomedical
  - abstract
  - conclusion-generation
pretty_name: MedConclusion Compact
size_categories:
  - 100K<n<1M

MedConclusion-Compact

MedConclusion is a large-scale dataset of 5.7M PubMed structured abstracts for biomedical conclusion generation. Each instance pairs the non-conclusion sections of an abstract with the original author-written conclusion, providing naturally occurring supervision for evidence-to-conclusion reasoning. MedConclusion also includes journal-level metadata such as biomedical category and SJR, enabling subgroup analysis across biomedical domains.

This repository contains the Compact version of the dataset, designed for faster evaluation and model prototyping. For the full dataset (5.7M instances), please check out the Full Version.

• Train: 100,000 instances
• Validation: 10,000 instances
• Test: 30,000 instances

Benchmark Information

This dataset is introduced in the paper MedConclusion: A Benchmark for Biomedical Conclusion Generation from Structured Abstracts.

Citation

@article{li2026medconclusion,
  title={MedConclusion: A Benchmark for Biomedical Conclusion Generation from Structured Abstracts},
  author={Li, Weiyue and Qian, Ruizhi and Li, Yi and Li, Yongce and Long, Yunfan and Cai, Jiahui and Luo, Yan and Wang, Mengyu},
  journal={arXiv preprint arXiv:2604.06505},
  year={2026}
}