dataset_id
large_stringclasses
414 values
reaction_id
large_stringlengths
36
36
reaction_smiles
large_stringlengths
4
873
rxn_insight_reaction
large_stringlengths
19
1.07k
mapped_reaction_smiles
large_stringlengths
14
3.37k
reactant_smiles
large_stringlengths
1
581
product_smiles
large_stringlengths
1
433
reagent_smiles
large_stringclasses
634 values
catalyst_smiles
large_stringlengths
1
683
solvent_smiles
large_stringlengths
1
245
rxn_insight_class
large_stringclasses
11 values
rxn_insight_name
large_stringclasses
346 values
rxn_insight_tag
large_stringlengths
64
64
rxn_insight_tag2
large_stringlengths
64
64
rxn_insight_scaffold
large_stringlengths
5
288
rxn_insight_template
large_stringlengths
24
2.64k
yield_percent
float64
-0.8
90,205,160,000B
yield_measurements
large_stringlengths
2
864
temperature_value
float64
-230
30.1k
temperature_units
large_stringclasses
3 values
reaction_time_value
float64
0
4k
time_units
large_stringclasses
4 values
procedure_details
large_stringlengths
1
23.6k
reference
large_stringclasses
96 values
doi
large_stringclasses
19 values
functional_groups_reactants
large_stringlengths
3
716
functional_groups_products
large_stringlengths
3
539
participating_rings_reactants
large_stringlengths
5
293
participating_rings_products
large_stringlengths
5
271
all_rings_products
large_stringlengths
5
271
byproduct_smiles
large_stringclasses
176 values
agent_smiles
large_stringlengths
1
712
temperature_c
float64
-230
30.1k
reaction_time_hours
float64
0
2.16k
reaction_smiles_with_agents
large_stringlengths
4
882
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-4e8c3752e4d84c4e94e8850476690a70
Cc1cc(C#N)cc([N+](=O)[O-])c1NC(=O)C(F)(F)F>>Cc1cc(C#N)cc([N+](=O)[O-])c1N
C(#N)C1=CC(=C(C(=C1)[N+](=O)[O-])NC(C(F)(F)F)=O)C.N>>NC1=C(C=C(C#N)C=C1[N+](=O)[O-])C
O=C(C(F)(F)F)[NH:13][c:12]1[c:2]([CH3:1])[cH:3][c:4]([C:5]#[N:6])[cH:7][c:8]1[N+:9](=[O:10])[O-:11]>>[CH3:1][c:2]1[cH:3][c:4]([C:5]#[N:6])[cH:7][c:8]([N+:9](=[O:10])[O-:11])[c:12]1[NH2:13]
Cc1cc(C#N)cc([N+](=O)[O-])c1NC(=O)C(F)(F)F
Cc1cc(C#N)cc([N+](=O)[O-])c1N
null
null
CO
Reduction
Hydrogenolysis of amides/imides/carbamates
44b36597c7daf0608965c52c8db8a9220c21d9447ce54e0af375898475f3493f
caaeb83af2cb178156ae90fe7f610a106cd4bb5397d23f56d37a7fe11e2668ed
c1ccccc1
F-C(-F)(-F)-C(=O)-[NH;D2;+0:1]-[c:2](:[c:3]):[c:4]>>[NH2;D1;+0:1]-[c:2](:[c:3]):[c:4]
99.9
[{"value": 99.9, "product": "NC1=C(C=C(C#N)C=C1[N+](=O)[O-])C", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
null
null
A mixture of N-(4-cyano-2-methyl-6-nitro-phenyl)-2,2,2-trifluoro-acetamide (5 g, 18.3 mmol) and 2 M ammonia in methanol (80 mL) was heated to reflux for 14 h and then cooled to room temperature. After concentration in vacuo, the residue was purified by flash chromatography (20% EtOAc/hexane) to yield the title compound...
10.6084/m9.figshare.5104873.v1
null
Trifluoro group.Secondary amide
Primary amine
null
null
c1ccccc1
Other
CO
null
null
Cc1cc(C#N)cc([N+](=O)[O-])c1NC(=O)C(F)(F)F>CO>Cc1cc(C#N)cc([N+](=O)[O-])c1N
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-76f4bc838b0749879a6e5332ddbcc273
Cc1cc(C#N)cc([N+](=O)[O-])c1N>>Cc1cc(C#N)cc(N)c1N
NC1=C(C=C(C#N)C=C1[N+](=O)[O-])C.O.O.[Sn](Cl)(Cl)(Cl)Cl>>NC=1C=C(C#N)C=C(C1N)C
O=[N+:9]([O-])[c:8]1[cH:7][c:4]([C:5]#[N:6])[cH:3][c:2]([CH3:1])[c:10]1[NH2:11]>>[CH3:1][c:2]1[cH:3][c:4]([C:5]#[N:6])[cH:7][c:8]([NH2:9])[c:10]1[NH2:11]
Cc1cc(C#N)cc([N+](=O)[O-])c1N
Cc1cc(C#N)cc(N)c1N
null
null
C(C)O
Reduction
Reduction of nitro groups to amines
bbc242b150a51e69d3ad1caaa391f4422710431b398dcb880555f476706790be
7b0317532ea57a4fcedc1efc3e3c22eb5238d1c8330da53d4f9801fc2391f567
c1ccccc1
O=[N+;H0;D3:1](-[O-])-[c:2](:[c:3]):[c:4]>>[NH2;D1;+0:1]-[c:2](:[c:3]):[c:4]
81
[{"value": 81.0, "product": "NC=1C=C(C#N)C=C(C1N)C", "details": "PERCENTYIELD", "is_desired": false}, {"value": 80.6, "product": "NC=1C=C(C#N)C=C(C1N)C", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
null
null
To a solution of 4-amino-3-methyl-5-nitro-benzonitrile (3.24 g, 18.3 mmol) in ethanol (80 mL) was added tin chloride dihydrate (8.67 g, 49.75 mmol). The reaction mixture was heated to reflux for 14 h, then cooled to room temperature, and concentrated in vacuum. The residue was diluted with ethyl acetate (100 mL) and tr...
10.6084/m9.figshare.5104873.v1
null
Nitro group
Primary amine
null
null
c1ccccc1
Other
C(C)O
null
null
Cc1cc(C#N)cc([N+](=O)[O-])c1N>C(C)O>Cc1cc(C#N)cc(N)c1N
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-f7db9bd74a30493389370bacecebb099
COc1nccc(I)c1C=O.Cc1cc(C#N)cc(N)c1N>>COc1nccc(I)c1-c1nc2c(C)cc(C#N)cc2[nH]1
NC=1C=C(C#N)C=C(C1N)C.IC1=C(C(=NC=C1)OC)C=O.II>>IC1=C(C(=NC=C1)OC)C=1NC2=C(N1)C(=CC(=C2)C#N)C
O=[CH:10][c:9]1[c:3]([O:2][CH3:1])[n:4][cH:5][cH:6][c:7]1[I:8].[NH2:11][c:12]1[c:13]([CH3:14])[cH:15][c:16]([C:17]#[N:18])[cH:19][c:20]1[NH2:21]>>[CH3:1][O:2][c:3]1[n:4][cH:5][cH:6][c:7]([I:8])[c:9]1-[c:10]1[n:11][c:12]2[c:13]([CH3:14])[cH:15][c:16]([C:17]#[N:18])[cH:19][c:20]2[nH:21]1
COc1nccc(I)c1C=O.Cc1cc(C#N)cc(N)c1N
COc1nccc(I)c1-c1nc2c(C)cc(C#N)cc2[nH]1
null
null
CO
Aromatic Heterocycle Formation
Benzimidazole aldehyde
357211f0cea48f6066cc617c063d8f639b186739754abf69a9bef955d42b7d06
947e8e758a50553bad3d8f39fd1540e5051c4c73055f7a5a9da00894523e8ba0
c1cncc(-c2nc3ccccc3[nH]2)c1
O=[CH;D2;+0:1]-[c;H0;D3;+0:2]1:[c:3](-[#8:4]):[#7;a:5]:[c:6]:[c:7]:[c:8]:1-[I;D1;H0:9].[NH2;D1;+0:10]-[c:11](:[c:12]):[c:13](-[NH2;D1;+0:14]):[c:15]>>[#8:4]-[c:3]1:[#7;a:5]:[c:6]:[c:7]:[c:8](-[I;D1;H0:9]):[c;H0;D3;+0:2]:1-[c;H0;D3;+0:1]1:[n;H0;D2;+0:10]:[c:11](:[c:12]):[c:13](:[c:15]):[nH;D2;+0:14]:1
46
[{"value": 46.0, "product": "IC1=C(C(=NC=C1)OC)C=1NC2=C(N1)C(=CC(=C2)C#N)C", "details": "PERCENTYIELD", "is_desired": false}, {"value": 34.1, "product": "IC1=C(C(=NC=C1)OC)C=1NC2=C(N1)C(=CC(=C2)C#N)C", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
0
CELSIUS
1
HOUR
To a solution of 3,4-diamino-5-methyl-benzonitrile (2.00 g, 13.6 mmol) in MeOH (40 mL) was added 4-iodo-2-methoxy-pyridine-3-carbaldehyde (3.6 g, 13.6 mmol) in MeOH (20 mL) at 0° C. The resulting slurry was stirred at 0° C. for 1 h. Iodine (1.73 g, 8.8 mmol) in MeOH (10 mL) was added dropwise via a dropping funnel to t...
10.6084/m9.figshare.5104873.v1
null
Aldehyde.Primary amine.Primary amine
null
c1ccccc1
c1ccc2[nH]cnc2c1
c1ccncc1.c1ccc2[nH]cnc2c1
HO-
CO
0
1
COc1nccc(I)c1C=O.Cc1cc(C#N)cc(N)c1N>CO>COc1nccc(I)c1-c1nc2c(C)cc(C#N)cc2[nH]1
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-e9b129fd196c4375af69d56e4306eba2
COc1nccc(I)c1-c1nc2c(C)cc(C#N)cc2[nH]1.Cl>>Cc1cc(C#N)cc2[nH]c(-c3c(Cl)cc[nH]c3=O)nc12
IC1=C(C(=NC=C1)OC)C=1NC2=C(N1)C(=CC(=C2)C#N)C.O1CCOCC1.Cl>>ClC1=C(C(NC=C1)=O)C=1NC2=C(N1)C(=CC(=C2)C#N)C
C[O:18][c:17]1[c:11](-[c:10]2[nH:9][c:8]3[cH:7][c:4]([C:5]#[N:6])[cH:3][c:2]([CH3:1])[c:20]3[n:19]2)[c:12](I)[cH:14][cH:15][n:16]1.[ClH:13]>>[CH3:1][c:2]1[cH:3][c:4]([C:5]#[N:6])[cH:7][c:8]2[nH:9][c:10](-[c:11]3[c:12]([Cl:13])[cH:14][cH:15][nH:16][c:17]3=[O:18])[n:19][c:20]12
COc1nccc(I)c1-c1nc2c(C)cc(C#N)cc2[nH]1.Cl
Cc1cc(C#N)cc2[nH]c(-c3c(Cl)cc[nH]c3=O)nc12
null
null
null
Acylation
OtherReaction
e951b62dd313cc815c5edb5634072da74631e71e2f87b3bd3a8160fd520a7e58
e36bd0e1759e0304f05a7d022d4761db897d009399240b55b59d114a1955055a
O=c1[nH]cccc1-c1nc2ccccc2[nH]1
C-[O;H0;D2;+0:1]-[c;H0;D3;+0:2]1:[n;H0;D2;+0:3]:[c:4]:[c:5]:[c;H0;D3;+0:6](-I):[c:7]:1-[c:8](:[#7;a:9]):[#7;a:10].[ClH;D0;+0:11]>>[#7;a:9]:[c:8](-[c:7]1:[c;H0;D3;+0:6](-[Cl;H0;D1;+0:11]):[c:5]:[c:4]:[nH;D2;+0:3]:[c;H0;D3;+0:2]:1=[O;H0;D1;+0:1]):[#7;a:10]
null
[]
80
CELSIUS
null
null
A suspension of 2-(4-iodo-2-methoxy-pyridin-3-yl)-7-methyl-3H-benzimidazole-5-carbonitrile (1.8 g, 4.63 mmol) in 4 M HCl dioxane (40 mL) was heated to 80° C. for 6 h and cooled to room temperature. The precipitate was filtered and dried. The crude product (1.08 g, 82%) was used for the next step without purification. L...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Ether
Aromatic halide
c1ccncc1
c1cccnc1
c1ccc2[nH]cnc2c1.c1cccnc1
HI
null
80
null
COc1nccc(I)c1-c1nc2c(C)cc(C#N)cc2[nH]1.Cl>>Cc1cc(C#N)cc2[nH]c(-c3c(Cl)cc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-272c0a8206af4a4e90ea31603bc4498d
Cc1cc(Br)cc([N+](=O)[O-])c1N>>Cc1cc(Br)cc(N)c1N
BrC1=CC(=C(C(=C1)[N+](=O)[O-])N)C.O.O.[Sn](Cl)(Cl)(Cl)Cl>>BrC1=CC(=C(C(=C1)N)N)C
O=[N+:8]([O-])[c:7]1[cH:6][c:4]([Br:5])[cH:3][c:2]([CH3:1])[c:9]1[NH2:10]>>[CH3:1][c:2]1[cH:3][c:4]([Br:5])[cH:6][c:7]([NH2:8])[c:9]1[NH2:10]
Cc1cc(Br)cc([N+](=O)[O-])c1N
Cc1cc(Br)cc(N)c1N
null
null
C(C)O
Reduction
Reduction of nitro groups to amines
bbc242b150a51e69d3ad1caaa391f4422710431b398dcb880555f476706790be
7b0317532ea57a4fcedc1efc3e3c22eb5238d1c8330da53d4f9801fc2391f567
c1ccccc1
O=[N+;H0;D3:1](-[O-])-[c:2](:[c:3]):[c:4]>>[NH2;D1;+0:1]-[c:2](:[c:3]):[c:4]
59.3
[{"value": 59.0, "product": "BrC1=CC(=C(C(=C1)N)N)C", "details": "PERCENTYIELD", "is_desired": false}, {"value": 59.3, "product": "BrC1=CC(=C(C(=C1)N)N)C", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
null
null
To a suspension of 4-bromo-2-methyl-6-nitro-phenylamine (20 g, 0.086 mol) in ethanol (200 mL) was added tin chloride dihydrate (49.2 g, 0.258 mol). The reaction mixture was heated to reflux for 14 h, cooled to room temperature, and concentrated in vacuo. The residue was diluted with ethyl acetate (150 mL) and treated w...
10.6084/m9.figshare.5104873.v1
null
Nitro group
Primary amine
null
null
c1ccccc1
Other
C(C)O
null
null
Cc1cc(Br)cc([N+](=O)[O-])c1N>C(C)O>Cc1cc(Br)cc(N)c1N
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-4b00853eeb464eee89cdc6d5482df125
COc1nccc(I)c1C=O.Cc1cc(Br)cc(N)c1N>>COc1nccc(I)c1-c1nc2c(C)cc(Br)cc2[nH]1
BrC=1C=C(C(=C(C1)N)N)C.IC1=C(C(=NC=C1)OC)C=O.II>>BrC=1C=C(C2=C(NC(=N2)C=2C(=NC=CC2I)OC)C1)C
O=[CH:10][c:9]1[c:3]([O:2][CH3:1])[n:4][cH:5][cH:6][c:7]1[I:8].[NH2:11][c:12]1[c:13]([CH3:14])[cH:15][c:16]([Br:17])[cH:18][c:19]1[NH2:20]>>[CH3:1][O:2][c:3]1[n:4][cH:5][cH:6][c:7]([I:8])[c:9]1-[c:10]1[n:11][c:12]2[c:13]([CH3:14])[cH:15][c:16]([Br:17])[cH:18][c:19]2[nH:20]1
COc1nccc(I)c1C=O.Cc1cc(Br)cc(N)c1N
COc1nccc(I)c1-c1nc2c(C)cc(Br)cc2[nH]1
null
null
CO
Aromatic Heterocycle Formation
Benzimidazole aldehyde
357211f0cea48f6066cc617c063d8f639b186739754abf69a9bef955d42b7d06
947e8e758a50553bad3d8f39fd1540e5051c4c73055f7a5a9da00894523e8ba0
c1cncc(-c2nc3ccccc3[nH]2)c1
O=[CH;D2;+0:1]-[c;H0;D3;+0:2]1:[c:3](-[#8:4]):[#7;a:5]:[c:6]:[c:7]:[c:8]:1-[I;D1;H0:9].[NH2;D1;+0:10]-[c:11](:[c:12]):[c:13](-[NH2;D1;+0:14]):[c:15]>>[#8:4]-[c:3]1:[#7;a:5]:[c:6]:[c:7]:[c:8](-[I;D1;H0:9]):[c;H0;D3;+0:2]:1-[c;H0;D3;+0:1]1:[n;H0;D2;+0:10]:[c:11](:[c:12]):[c:13](:[c:15]):[nH;D2;+0:14]:1
46
[{"value": 46.0, "product": "BrC=1C=C(C2=C(NC(=N2)C=2C(=NC=CC2I)OC)C1)C", "details": "PERCENTYIELD", "is_desired": false}, {"value": 45.8, "product": "BrC=1C=C(C2=C(NC(=N2)C=2C(=NC=CC2I)OC)C1)C", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
30
MINUTE
To a solution of 5-bromo-3-methyl-1,2-phenylenediamine (4 g, 19.9 mmol) in methanol (80 mL) was added 4-iodo-2-methoxy-pyridine-3-carbaldehyde (5.23 g, 19.9 mmol) in methanol (20 mL) dropwise at 0° C. The resulting slurry was stirred for 30 min at room temperature. Then iodine (2.53 g, 9.95 mmol) in methanol (20 mL) wa...
10.6084/m9.figshare.5104873.v1
null
Aldehyde.Primary amine.Primary amine
null
c1ccccc1
c1ccc2[nH]cnc2c1
c1ccncc1.c1ccc2[nH]cnc2c1
HO-
CO
null
0.5
COc1nccc(I)c1C=O.Cc1cc(Br)cc(N)c1N>CO>COc1nccc(I)c1-c1nc2c(C)cc(Br)cc2[nH]1
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-1e55b6a1c8dc4ba9bdb4fb040e6f8307
COc1nccc(I)c1-c1nc2c(C)cc(Br)cc2[nH]1.Cl>>Cc1cc(Br)cc2[nH]c(-c3c(Cl)cc[nH]c3=O)nc12
BrC=1C=C(C2=C(NC(=N2)C=2C(=NC=CC2I)OC)C1)C.Cl>>BrC=1C=C(C2=C(NC(=N2)C=2C(NC=CC2Cl)=O)C1)C
C[O:17][c:16]1[c:10](-[c:9]2[nH:8][c:7]3[cH:6][c:4]([Br:5])[cH:3][c:2]([CH3:1])[c:19]3[n:18]2)[c:11](I)[cH:13][cH:14][n:15]1.[ClH:12]>>[CH3:1][c:2]1[cH:3][c:4]([Br:5])[cH:6][c:7]2[nH:8][c:9](-[c:10]3[c:11]([Cl:12])[cH:13][cH:14][nH:15][c:16]3=[O:17])[n:18][c:19]12
COc1nccc(I)c1-c1nc2c(C)cc(Br)cc2[nH]1.Cl
Cc1cc(Br)cc2[nH]c(-c3c(Cl)cc[nH]c3=O)nc12
null
null
O1CCOCC1
Acylation
OtherReaction
e951b62dd313cc815c5edb5634072da74631e71e2f87b3bd3a8160fd520a7e58
e36bd0e1759e0304f05a7d022d4761db897d009399240b55b59d114a1955055a
O=c1[nH]cccc1-c1nc2ccccc2[nH]1
C-[O;H0;D2;+0:1]-[c;H0;D3;+0:2]1:[n;H0;D2;+0:3]:[c:4]:[c:5]:[c;H0;D3;+0:6](-I):[c:7]:1-[c:8](:[#7;a:9]):[#7;a:10].[ClH;D0;+0:11]>>[#7;a:9]:[c:8](-[c:7]1:[c;H0;D3;+0:6](-[Cl;H0;D1;+0:11]):[c:5]:[c:4]:[nH;D2;+0:3]:[c;H0;D3;+0:2]:1=[O;H0;D1;+0:1]):[#7;a:10]
100
[{"value": 100.0, "product": "BrC=1C=C(C2=C(NC(=N2)C=2C(NC=CC2Cl)=O)C1)C", "details": "PERCENTYIELD", "is_desired": false}]
80
CELSIUS
null
null
The suspension of 6-bromo-2-(4-iodo-2-methoxy-pyridin-3-yl)-4-methyl-1H-benzimidazole (4 g, 9.03 mmol) and 60 mL of 4 M HCl in dioxane was heated to 80° C. for 6 h and cooled to room temperature. The precipitate was filtered and dried to yield the title compound (3.0 g, 100%) as a brown powder. The crude product was us...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Ether
Aromatic halide
c1ccncc1
c1cccnc1
c1ccc2[nH]cnc2c1.c1cccnc1
HI
O1CCOCC1
80
null
COc1nccc(I)c1-c1nc2c(C)cc(Br)cc2[nH]1.Cl>O1CCOCC1>Cc1cc(Br)cc2[nH]c(-c3c(Cl)cc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-fd1da47032174001bd7f6f2b2c98d939
Cc1cc(Br)cc2[nH]c(-c3c(Cl)cc[nH]c3=O)nc12.N[C@H](CO)Cc1ccccc1>>Cc1cc(Br)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
BrC=1C=C(C2=C(NC(=N2)C=2C(NC=CC2Cl)=O)C1)C.N[C@H](CO)CC1=CC=CC=C1.CN1CCOCC1>>C(C1=CC=CC=C1)[C@@H](CO)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)Br
Cl[c:11]1[c:10](-[c:9]2[nH:8][c:7]3[cH:6][c:4]([Br:5])[cH:3][c:2]([CH3:1])[c:29]3[n:28]2)[c:26](=[O:27])[nH:25][cH:24][cH:23]1.[NH2:12][C@H:13]([CH2:14][OH:15])[CH2:16][c:17]1[cH:18][cH:19][cH:20][cH:21][cH:22]1>>[CH3:1][c:2]1[cH:3][c:4]([Br:5])[cH:6][c:7]2[nH:8][c:9](-[c:10]3[c:11]([NH:12][C@H:13]([CH2:14][OH:15])[CH2...
Cc1cc(Br)cc2[nH]c(-c3c(Cl)cc[nH]c3=O)nc12.N[C@H](CO)Cc1ccccc1
Cc1cc(Br)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
null
null
CN(C)C=O
Heteroatom Alkylation and Arylation
N-arylation (Buchwald-Hartwig/Ullmann-Goldberg)
e72e852090cf7435e97b85905772f4450e91af32c902e1e774d793ceb6479b9b
71a04ae650defc5edd86a92f43c304e981a05f07ff76248da8d4155f3905a29d
O=c1[nH]ccc(NCCc2ccccc2)c1-c1nc2ccccc2[nH]1
Cl-[c;H0;D3;+0:1]1:[c:2]:[c:3]:[#7;a:4]:[c:5](=[O;D1;H0:6]):[c:7]:1-[c:8](:[#7;a:9]):[#7;a:10].[C:11]-[C:12](-[C:13])-[NH2;D1;+0:14]>>[#7;a:9]:[c:8](-[c:7]1:[c:5](=[O;D1;H0:6]):[#7;a:4]:[c:3]:[c:2]:[c;H0;D3;+0:1]:1-[NH;D2;+0:14]-[C:12](-[C:11])-[C:13]):[#7;a:10]
74
[{"value": 74.0, "product": "C(C1=CC=CC=C1)[C@@H](CO)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)Br", "details": "PERCENTYIELD", "is_desired": false}, {"value": 73.5, "product": "C(C1=CC=CC=C1)[C@@H](CO)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)Br", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
80
CELSIUS
null
null
To a solution of 3-(6-bromo-4-methyl-1H-benzimidazol-2-yl)-4-chloro-1H-pyridin-2-one (1.42 g, 3.78 mmol) in DMF (15 mL) were added (S)-(−)-2-amino-3-phenyl-1-propanol (1.43 g, 9.45 mmol) and N-methyl morpholine (1.5 mL). The reaction mixture was heated to 80° C. for 6 h and cooled to room temperature. The solvent was r...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Primary amine
Secondary amine
c1cccnc1
c1cccnc1
c1ccc2[nH]cnc2c1.c1ccccc1.c1cccnc1
HCl
CN(C)C=O
80
null
Cc1cc(Br)cc2[nH]c(-c3c(Cl)cc[nH]c3=O)nc12.N[C@H](CO)Cc1ccccc1>CN(C)C=O>Cc1cc(Br)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-d27feae59ba64f999664ce3ebcec9fe0
Cc1cc(Br)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12.ClC(c1ccccc1)(c1ccccc1)c1ccccc1>>Cc1cc(Br)cc2[nH]c(-c3c(N[C@H](COC(c4ccccc4)(c4ccccc4)c4ccccc4)Cc4ccccc4)cc[nH]c3=O)nc12
C1(=CC=CC=C1)C(C1=CC=CC=C1)(C1=CC=CC=C1)Cl.C(C1=CC=CC=C1)[C@@H](CO)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)Br.C(=O)([O-])[O-].[Cs+].[Cs+]>>C(C1=CC=CC=C1)[C@@H](COC(C1=CC=CC=C1)(C1=CC=CC=C1)C1=CC=CC=C1)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)Br
[CH3:1][c:2]1[cH:3][c:4]([Br:5])[cH:6][c:7]2[nH:8][c:9](-[c:10]3[c:11]([NH:12][C@H:13]([CH2:14][OH:15])[CH2:35][c:36]4[cH:37][cH:38][cH:39][cH:40][cH:41]4)[cH:42][cH:43][nH:44][c:45]3=[O:46])[n:47][c:48]12.Cl[C:16]([c:17]1[cH:18][cH:19][cH:20][cH:21][cH:22]1)([c:23]1[cH:24][cH:25][cH:26][cH:27][cH:28]1)[c:29]1[cH:30][c...
Cc1cc(Br)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12.ClC(c1ccccc1)(c1ccccc1)c1ccccc1
Cc1cc(Br)cc2[nH]c(-c3c(N[C@H](COC(c4ccccc4)(c4ccccc4)c4ccccc4)Cc4ccccc4)cc[nH]c3=O)nc12
null
null
C1CCOC1
Heteroatom Alkylation and Arylation
Williamson Ether Synthesis
fb955127af596450632db904a0236d35e158107f202af7adbe96e225ff5ada1f
5adfb0e9c2ca3c5afac2c4b206fb6fda83b92f44074f2a75e26f913c192bc169
O=c1[nH]ccc(N[C@H](COC(c2ccccc2)(c2ccccc2)c2ccccc2)Cc2ccccc2)c1-c1nc2ccccc2[nH]1
Cl-[C;H0;D4;+0:1](-[c:2](:[c:3]):[c:4])(-[c:5](:[c:6]):[c:7])-[c:8](:[c:9]):[c:10].[C:11]-[C:12]-[OH;D1;+0:13]>>[C:11]-[C:12]-[O;H0;D2;+0:13]-[C;H0;D4;+0:1](-[c:2](:[c:3]):[c:4])(-[c:5](:[c:6]):[c:7])-[c:8](:[c:9]):[c:10]
73
[{"value": 73.0, "product": "C(C1=CC=CC=C1)[C@@H](COC(C1=CC=CC=C1)(C1=CC=CC=C1)C1=CC=CC=C1)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)Br", "details": "PERCENTYIELD", "is_desired": false}, {"value": 72.6, "product": "C(C1=CC=CC=C1)[C@@H](COC(C1=CC=CC=C1)(C1=CC=CC=C1)C1=CC=CC=C1)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)Br", "d...
null
null
null
null
To a solution of (S)-4-(1-benzyl-2-hydroxy-ethylamino)-3-(6-bromo-4-methyl-1H-benzimidazol-2-yl)-1H-pyridin-2-one (0.9 g, 1.98 mmol) in THF (30 mL), was added Cs2CO3 (1.29 g, 3.96 mmol) followed by triphenylmethyl chloride (1.10 g, 3.96 mmol). The reaction mixture was heated to reflux for 14 h under nitrogen and then c...
10.6084/m9.figshare.5104873.v1
null
Tertiary halide.Primary alcohol
Ether
null
null
c1ccc2[nH]cnc2c1.c1ccccc1.c1ccccc1.c1ccccc1.c1ccccc1.c1cccnc1
HCl
C1CCOC1
null
null
Cc1cc(Br)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12.ClC(c1ccccc1)(c1ccccc1)c1ccccc1>C1CCOC1>Cc1cc(Br)cc2[nH]c(-c3c(N[C@H](COC(c4ccccc4)(c4ccccc4)c4ccccc4)Cc4ccccc4)cc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-a84bd83a5a4b41d2a9adea572eb3afa2
CC(=O)N1CCNCC1.Cc1cc(Br)cc([N+](=O)[O-])c1N>>CC(=O)N1CCN(c2cc(C)c(N)c([N+](=O)[O-])c2)CC1
BrC1=CC(=C(C(=C1)[N+](=O)[O-])N)C.C(C)(=O)N1CCNCC1.C(C)(C)(C)P(C(C)(C)C)C(C)(C)C.CC(C)([O-])C.[Na+]>>NC1=C(C=C(C=C1[N+](=O)[O-])N1CCN(CC1)C(C)=O)C
[CH3:1][C:2](=[O:3])[N:4]1[CH2:5][CH2:6][NH:7][CH2:19][CH2:20]1.Br[c:8]1[cH:9][c:10]([CH3:11])[c:12]([NH2:13])[c:14]([N+:15](=[O:16])[O-:17])[cH:18]1>>[CH3:1][C:2](=[O:3])[N:4]1[CH2:5][CH2:6][N:7]([c:8]2[cH:9][c:10]([CH3:11])[c:12]([NH2:13])[c:14]([N+:15](=[O:16])[O-:17])[cH:18]2)[CH2:19][CH2:20]1
CC(=O)N1CCNCC1.Cc1cc(Br)cc([N+](=O)[O-])c1N
CC(=O)N1CCN(c2cc(C)c(N)c([N+](=O)[O-])c2)CC1
null
C(C)(=O)[O-].[Pd+2].C(C)(=O)[O-]
C1(=CC=CC=C1)C.CCOC(=O)C
Heteroatom Alkylation and Arylation
Ullmann-Goldberg Substitution amine
d687b31bdda9f407fdde6ca57e67eee0681e173646c617afef7770c56d05bab9
b6b8e2cdb45054a35f5e8157d624f852c0601a09401556706e166b19536eb7a7
c1ccc(N2CCNCC2)cc1
Br-[c;H0;D3;+0:1](:[c:2]:[c:3]):[c:4]:[c:5].[#7:6]1-[C:7]-[C:8]-[NH;D2;+0:9]-[C:10]-[C:11]-1>>[c:5]:[c:4]:[c;H0;D3;+0:1](-[N;H0;D3;+0:9]1-[C:8]-[C:7]-[#7:6]-[C:11]-[C:10]-1):[c:2]:[c:3]
70
[{"value": 70.0, "product": "NC1=C(C=C(C=C1[N+](=O)[O-])N1CCN(CC1)C(C)=O)C", "details": "PERCENTYIELD", "is_desired": false}, {"value": 69.9, "product": "NC1=C(C=C(C=C1[N+](=O)[O-])N1CCN(CC1)C(C)=O)C", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
100
CELSIUS
null
null
A mixture of 4-bromo-2-methyl-6-nitro-phenylamine (5 g, 21.64 mmol), 1-acetylpiperazine (4.2 g, 32.46 mmol), palladium acetate (244 mg, 1.08 mmol), tri-tert-butylphosphine (440 mg, 2.16 mmol) and sodium tert-butoxide (4.2 g, 43.29 mmol) in toluene (70 mL) was heated to 100° C. for 14 h under nitrogen. The reaction mixt...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Secondary amine
Tertiary amine
C1C[NH]CCN1.c1ccccc1
C1C[NH]CC[NH]1.c1ccccc1
C1C[NH]CC[NH]1.c1ccccc1
HBr
C(C)(=O)[O-].[Pd+2].C(C)(=O)[O-].C1(=CC=CC=C1)C.CCOC(=O)C
100
null
CC(=O)N1CCNCC1.Cc1cc(Br)cc([N+](=O)[O-])c1N>C(C)(=O)[O-].[Pd+2].C(C)(=O)[O-].C1(=CC=CC=C1)C.CCOC(=O)C>CC(=O)N1CCN(c2cc(C)c(N)c([N+](=O)[O-])c2)CC1
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-bed9fbed16c64e1a92b66c057757d180
CC(=O)N1CCN(c2cc(C)c(N)c([N+](=O)[O-])c2)CC1>>CC(=O)N1CCN(c2cc(C)c(N)c(N)c2)CC1
NC1=C(C=C(C=C1[N+](=O)[O-])N1CCN(CC1)C(C)=O)C.CO.[H][H]>>NC=1C=C(C=C(C1N)C)N1CCN(CC1)C(C)=O
O=[N+:15]([O-])[c:14]1[c:12]([NH2:13])[c:10]([CH3:11])[cH:9][c:8]([N:7]2[CH2:6][CH2:5][N:4]([C:2]([CH3:1])=[O:3])[CH2:18][CH2:17]2)[cH:16]1>>[CH3:1][C:2](=[O:3])[N:4]1[CH2:5][CH2:6][N:7]([c:8]2[cH:9][c:10]([CH3:11])[c:12]([NH2:13])[c:14]([NH2:15])[cH:16]2)[CH2:17][CH2:18]1
CC(=O)N1CCN(c2cc(C)c(N)c([N+](=O)[O-])c2)CC1
CC(=O)N1CCN(c2cc(C)c(N)c(N)c2)CC1
null
[Pd]
C(C)(=O)O
Reduction
Reduction of nitro groups to amines
bbc242b150a51e69d3ad1caaa391f4422710431b398dcb880555f476706790be
7b0317532ea57a4fcedc1efc3e3c22eb5238d1c8330da53d4f9801fc2391f567
c1ccc(N2CCNCC2)cc1
O=[N+;H0;D3:1](-[O-])-[c:2](:[c:3]):[c:4]>>[NH2;D1;+0:1]-[c:2](:[c:3]):[c:4]
100
[{"value": 100.0, "product": "NC=1C=C(C=C(C1N)C)N1CCN(CC1)C(C)=O", "details": "PERCENTYIELD", "is_desired": false}, {"value": 99.4, "product": "NC=1C=C(C=C(C1N)C)N1CCN(CC1)C(C)=O", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
null
null
To 1-[4-(4-amino-3-methyl-5-nitro-phenyl)-piperazin-1-yl]-ethanone (4.5 g, 16.2 mmol) and 10% palladium on carbon (400 mg) were added methanol (50 mL) and acetic acid (5 mL) under nitrogen. The reaction mixture was stirred under hydrogen atmosphere (hydrogen balloon) for 14 h. The dark solution was filtered through a p...
10.6084/m9.figshare.5104873.v1
null
Nitro group
Primary amine
null
null
C1C[NH]CC[NH]1.c1ccccc1
Other
[Pd].C(C)(=O)O
null
null
CC(=O)N1CCN(c2cc(C)c(N)c([N+](=O)[O-])c2)CC1>[Pd].C(C)(=O)O>CC(=O)N1CCN(c2cc(C)c(N)c(N)c2)CC1
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-345fd5f6485d4d448ab744a28d2fce9f
CC(=O)N1CCN(c2cc(C)c(N)c(N)c2)CC1.COc1nccc(I)c1C=O>>COc1nccc(I)c1-c1nc2c(C)cc(N3CCN(C(C)=O)CC3)cc2[nH]1
NC=1C=C(C=C(C1N)C)N1CCN(CC1)C(C)=O.IC1=C(C(=NC=C1)OC)C=O>>IC1=C(C(=NC=C1)OC)C=1NC2=C(N1)C(=CC(=C2)N2CCN(CC2)C(C)=O)C
[NH2:11][c:12]1[c:13]([CH3:14])[cH:15][c:16]([N:17]2[CH2:18][CH2:19][N:20]([C:21]([CH3:22])=[O:23])[CH2:24][CH2:25]2)[cH:26][c:27]1[NH2:28].O=[CH:10][c:9]1[c:3]([O:2][CH3:1])[n:4][cH:5][cH:6][c:7]1[I:8]>>[CH3:1][O:2][c:3]1[n:4][cH:5][cH:6][c:7]([I:8])[c:9]1-[c:10]1[n:11][c:12]2[c:13]([CH3:14])[cH:15][c:16]([N:17]3[CH2:...
CC(=O)N1CCN(c2cc(C)c(N)c(N)c2)CC1.COc1nccc(I)c1C=O
COc1nccc(I)c1-c1nc2c(C)cc(N3CCN(C(C)=O)CC3)cc2[nH]1
null
null
CO
Aromatic Heterocycle Formation
Benzimidazole aldehyde
357211f0cea48f6066cc617c063d8f639b186739754abf69a9bef955d42b7d06
947e8e758a50553bad3d8f39fd1540e5051c4c73055f7a5a9da00894523e8ba0
c1cncc(-c2nc3ccc(N4CCNCC4)cc3[nH]2)c1
O=[CH;D2;+0:1]-[c;H0;D3;+0:2]1:[c:3](-[#8:4]):[#7;a:5]:[c:6]:[c:7]:[c:8]:1-[I;D1;H0:9].[NH2;D1;+0:10]-[c:11](:[c:12]):[c:13](-[NH2;D1;+0:14]):[c:15]>>[#8:4]-[c:3]1:[#7;a:5]:[c:6]:[c:7]:[c:8](-[I;D1;H0:9]):[c;H0;D3;+0:2]:1-[c;H0;D3;+0:1]1:[n;H0;D2;+0:10]:[c:11](:[c:12]):[c:13](:[c:15]):[nH;D2;+0:14]:1
66
[{"value": 66.0, "product": "IC1=C(C(=NC=C1)OC)C=1NC2=C(N1)C(=CC(=C2)N2CCN(CC2)C(C)=O)C", "details": "PERCENTYIELD", "is_desired": false}, {"value": 66.0, "product": "IC1=C(C(=NC=C1)OC)C=1NC2=C(N1)C(=CC(=C2)N2CCN(CC2)C(C)=O)C", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
14
HOUR
To a solution of 1-[4-(3,4-diamino-5-methyl-phenyl)-piperazin-1-yl]-ethanone (4.00 g, 16.18 mmol) in methanol (100 mL) was added 4-iodo-2-methoxy-pyridine-3-carbaldehyde (4.25 g, 16.18 mmol). The reaction mixture was stirred at room temperature for 14 h. After concentration, the residue was purified by flash column chr...
10.6084/m9.figshare.5104873.v1
null
Aldehyde.Primary amine.Primary amine
null
c1ccccc1
c1ccc2[nH]cnc2c1
c1ccncc1.c1ccc2[nH]cnc2c1.C1C[NH]CC[NH]1
HO-
CO
null
14
CC(=O)N1CCN(c2cc(C)c(N)c(N)c2)CC1.COc1nccc(I)c1C=O>CO>COc1nccc(I)c1-c1nc2c(C)cc(N3CCN(C(C)=O)CC3)cc2[nH]1
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-93c4cc724c774189a107cfeb372b15b6
COc1nccc(I)c1-c1nc2c(C)cc(N3CCN(C(C)=O)CC3)cc2[nH]1.Cl>>CC(=O)N1CCN(c2cc(C)c3nc(-c4c(Cl)cc[nH]c4=O)[nH]c3c2)CC1
IC1=C(C(=NC=C1)OC)C=1NC2=C(N1)C(=CC(=C2)N2CCN(CC2)C(C)=O)C.O.Cl>>C(C)(=O)N1CCN(CC1)C=1C=C(C2=C(NC(=N2)C=2C(NC=CC2Cl)=O)C1)C
C[O:22][c:21]1[c:15](-[c:14]2[n:13][c:12]3[c:10]([CH3:11])[cH:9][c:8]([N:7]4[CH2:6][CH2:5][N:4]([C:2]([CH3:1])=[O:3])[CH2:27][CH2:26]4)[cH:25][c:24]3[nH:23]2)[c:16](I)[cH:18][cH:19][n:20]1.[ClH:17]>>[CH3:1][C:2](=[O:3])[N:4]1[CH2:5][CH2:6][N:7]([c:8]2[cH:9][c:10]([CH3:11])[c:12]3[n:13][c:14](-[c:15]4[c:16]([Cl:17])[cH:...
COc1nccc(I)c1-c1nc2c(C)cc(N3CCN(C(C)=O)CC3)cc2[nH]1.Cl
CC(=O)N1CCN(c2cc(C)c3nc(-c4c(Cl)cc[nH]c4=O)[nH]c3c2)CC1
null
null
O1CCOCC1
Acylation
OtherReaction
e951b62dd313cc815c5edb5634072da74631e71e2f87b3bd3a8160fd520a7e58
e36bd0e1759e0304f05a7d022d4761db897d009399240b55b59d114a1955055a
O=c1[nH]cccc1-c1nc2ccc(N3CCNCC3)cc2[nH]1
C-[O;H0;D2;+0:1]-[c;H0;D3;+0:2]1:[n;H0;D2;+0:3]:[c:4]:[c:5]:[c;H0;D3;+0:6](-I):[c:7]:1-[c:8](:[#7;a:9]):[#7;a:10].[ClH;D0;+0:11]>>[#7;a:9]:[c:8](-[c:7]1:[c;H0;D3;+0:6](-[Cl;H0;D1;+0:11]):[c:5]:[c:4]:[nH;D2;+0:3]:[c;H0;D3;+0:2]:1=[O;H0;D1;+0:1]):[#7;a:10]
100
[{"value": 100.0, "product": "C(C)(=O)N1CCN(CC1)C=1C=C(C2=C(NC(=N2)C=2C(NC=CC2Cl)=O)C1)C", "details": "PERCENTYIELD", "is_desired": false}]
null
null
14
HOUR
To a solution of 1-{4-[2-(4-Iodo-2-methoxy-pyridin-3-yl)-7-methyl-3H-benzimidazol-5-yl]-piperazin-1-yl}-ethanone (5.2 g, 10.6 mmol) in 4 M HCl in dioxane (60 mL) was added water (5 mL). The reaction mixture was stirred at room temperature for 14 h. Concentration of the reaction mixture gave the title compound (4.02 g, ...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Ether
Aromatic halide
c1ccncc1
c1cccnc1
C1C[NH]CC[NH]1.c1ccc2[nH]cnc2c1.c1cccnc1
HI
O1CCOCC1
null
14
COc1nccc(I)c1-c1nc2c(C)cc(N3CCN(C(C)=O)CC3)cc2[nH]1.Cl>O1CCOCC1>CC(=O)N1CCN(c2cc(C)c3nc(-c4c(Cl)cc[nH]c4=O)[nH]c3c2)CC1
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-da0b643c52044c48bbae7a61052bcc6d
CC(=O)N1CCN(c2cc(C)c3nc(-c4c(Cl)cc[nH]c4=O)[nH]c3c2)CC1.N[C@H](CO)Cc1ccccc1>>CC(=O)N1CCN(c2cc(C)c3nc(-c4c(N[C@H](CO)Cc5ccccc5)cc[nH]c4=O)[nH]c3c2)CC1
C(C)(=O)N1CCN(CC1)C=1C=C(C2=C(NC(=N2)C=2C(NC=CC2Cl)=O)C1)C.N[C@H](CO)CC1=CC=CC=C1.CN1CCOCC1>>C(C)(=O)N1CCN(CC1)C=1C=C(C2=C(NC(=N2)C=2C(NC=CC2N[C@@H](CC2=CC=CC=C2)CO)=O)C1)C
Cl[c:16]1[c:15](-[c:14]2[n:13][c:12]3[c:10]([CH3:11])[cH:9][c:8]([N:7]4[CH2:6][CH2:5][N:4]([C:2]([CH3:1])=[O:3])[CH2:37][CH2:36]4)[cH:35][c:34]3[nH:33]2)[c:31](=[O:32])[nH:30][cH:29][cH:28]1.[NH2:17][C@H:18]([CH2:19][OH:20])[CH2:21][c:22]1[cH:23][cH:24][cH:25][cH:26][cH:27]1>>[CH3:1][C:2](=[O:3])[N:4]1[CH2:5][CH2:6][N:...
CC(=O)N1CCN(c2cc(C)c3nc(-c4c(Cl)cc[nH]c4=O)[nH]c3c2)CC1.N[C@H](CO)Cc1ccccc1
CC(=O)N1CCN(c2cc(C)c3nc(-c4c(N[C@H](CO)Cc5ccccc5)cc[nH]c4=O)[nH]c3c2)CC1
null
null
CN(C)C=O
Heteroatom Alkylation and Arylation
N-arylation (Buchwald-Hartwig/Ullmann-Goldberg)
e72e852090cf7435e97b85905772f4450e91af32c902e1e774d793ceb6479b9b
71a04ae650defc5edd86a92f43c304e981a05f07ff76248da8d4155f3905a29d
O=c1[nH]ccc(NCCc2ccccc2)c1-c1nc2ccc(N3CCNCC3)cc2[nH]1
Cl-[c;H0;D3;+0:1]1:[c:2]:[c:3]:[#7;a:4]:[c:5](=[O;D1;H0:6]):[c:7]:1-[c:8](:[#7;a:9]):[#7;a:10].[C:11]-[C:12](-[C:13])-[NH2;D1;+0:14]>>[#7;a:9]:[c:8](-[c:7]1:[c:5](=[O;D1;H0:6]):[#7;a:4]:[c:3]:[c:2]:[c;H0;D3;+0:1]:1-[NH;D2;+0:14]-[C:12](-[C:11])-[C:13]):[#7;a:10]
69.1
[{"value": 69.0, "product": "C(C)(=O)N1CCN(CC1)C=1C=C(C2=C(NC(=N2)C=2C(NC=CC2N[C@@H](CC2=CC=CC=C2)CO)=O)C1)C", "details": "PERCENTYIELD", "is_desired": false}, {"value": 69.1, "product": "C(C)(=O)N1CCN(CC1)C=1C=C(C2=C(NC(=N2)C=2C(NC=CC2N[C@@H](CC2=CC=CC=C2)CO)=O)C1)C", "details": "CALCULATEDPERCENTYIELD", "is_desired":...
80
CELSIUS
null
null
To a solution of 3-[6-(4-acetyl-piperazin-1-yl)-4-methyl-1H-benzimidazol-2-yl]-4-chloro-1 H-pyridin-2-one (1 g, 2.6 mmol) in DMF (10 mL) was added (S)-(−)-2-amino-3-phenyl-propanol (0.78 mg, 5.2 mmol) and N-methyl morpholine (2 mL). The reaction mixture was heated to 80° C. for 12 h, cooled to room temperature and conc...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Primary amine
Secondary amine
c1cccnc1
c1cccnc1
C1C[NH]CC[NH]1.c1ccc2[nH]cnc2c1.c1ccccc1.c1cccnc1
HCl
CN(C)C=O
80
null
CC(=O)N1CCN(c2cc(C)c3nc(-c4c(Cl)cc[nH]c4=O)[nH]c3c2)CC1.N[C@H](CO)Cc1ccccc1>CN(C)C=O>CC(=O)N1CCN(c2cc(C)c3nc(-c4c(N[C@H](CO)Cc5ccccc5)cc[nH]c4=O)[nH]c3c2)CC1
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-e2f19c51f51d48769083a354c2fbc81b
CC(=O)N1CCN(c2cc(C)c3nc(-c4c(N[C@H](CO)Cc5ccccc5)cc[nH]c4=O)[nH]c3c2)CC1>>Cc1cc(N2CCNCC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
C(C)(=O)N1CCN(CC1)C=1C=C(C2=C(NC(=N2)C=2C(NC=CC2N[C@@H](CC2=CC=CC=C2)CO)=O)C1)C.O>>OC[C@H](CC1=CC=CC=C1)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCNCC2
CC(=O)[N:8]1[CH2:7][CH2:6][N:5]([c:4]2[cH:3][c:2]([CH3:1])[c:34]3[c:12]([cH:11]2)[nH:13][c:14](-[c:15]2[c:16]([NH:17][C@H:18]([CH2:19][OH:20])[CH2:21][c:22]4[cH:23][cH:24][cH:25][cH:26][cH:27]4)[cH:28][cH:29][nH:30][c:31]2=[O:32])[n:33]3)[CH2:10][CH2:9]1>>[CH3:1][c:2]1[cH:3][c:4]([N:5]2[CH2:6][CH2:7][NH:8][CH2:9][CH2:1...
CC(=O)N1CCN(c2cc(C)c3nc(-c4c(N[C@H](CO)Cc5ccccc5)cc[nH]c4=O)[nH]c3c2)CC1
Cc1cc(N2CCNCC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
null
null
Cl.O1CCOCC1
Reduction
Hydrogenolysis of tertiary amines
75fd52c1630f43905d9d003b1db222148a2e7ad2503b4cc3182af52baaf356d3
62cf08a8ae6315067a063b5b3495125ccbdaff6b2340ce1d3e1c7b6cde962ae4
O=c1[nH]ccc(NCCc2ccccc2)c1-c1nc2ccc(N3CCNCC3)cc2[nH]1
C-C(=O)-[N;H0;D3;+0:1]1-[C:2]-[C:3]-[#7:4]-[C:5]-[C:6]-1>>[#7:4]1-[C:5]-[C:6]-[NH;D2;+0:1]-[C:2]-[C:3]-1
100
[{"value": 100.0, "product": "OC[C@H](CC1=CC=CC=C1)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCNCC2", "details": "PERCENTYIELD", "is_desired": false}, {"value": 10.1, "product": "OC[C@H](CC1=CC=CC=C1)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCNCC2", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
80
CELSIUS
null
null
To a solution of (S)-3-[6-(4-acetyl-piperazin-1-yl)-4-methyl-1H-benzimidazol-2-yl]-4-(1-hydroxymethyl-2-phenyl-ethylamino)-1H-pyridin-2-one (900 mg, 18 mmol) in 4 M HCl in dioxane (10 mL) was added water (1 mL). The reaction mixture was heated to 80° C. for 14 h and cooled to room temperature. Concentration with high v...
10.6084/m9.figshare.5104873.v1
null
Tertiary amide
Secondary amine
C1C[NH]CC[NH]1
C1C[NH]CCN1
C1C[NH]CCN1.c1ccc2[nH]cnc2c1.c1ccccc1.c1cccnc1
HO-
Cl.O1CCOCC1
80
null
CC(=O)N1CCN(c2cc(C)c3nc(-c4c(N[C@H](CO)Cc5ccccc5)cc[nH]c4=O)[nH]c3c2)CC1>Cl.O1CCOCC1>Cc1cc(N2CCNCC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-2fb724584d8e4136acef0b1feedd5538
Cc1cc(-n2ccnc2)cc(N)c1N.O=Cc1c(Cl)ncnc1Cl>>Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(Cl)ncnc3Cl)nc12
N1(C=NC=C1)C1=CC(=C(C(=C1)N)N)C.ClC1=NC=NC(=C1C=O)Cl>>ClC1=NC=NC(=C1C1=NC2=C(N1)C=C(C=C2C)N2C=NC=C2)Cl
[CH3:1][c:2]1[cH:3][c:4](-[n:5]2[cH:6][cH:7][n:8][cH:9]2)[cH:10][c:11]([NH2:12])[c:23]1[NH2:22].O=[CH:13][c:14]1[c:15]([Cl:16])[n:17][cH:18][n:19][c:20]1[Cl:21]>>[CH3:1][c:2]1[cH:3][c:4](-[n:5]2[cH:6][cH:7][n:8][cH:9]2)[cH:10][c:11]2[nH:12][c:13](-[c:14]3[c:15]([Cl:16])[n:17][cH:18][n:19][c:20]3[Cl:21])[n:22][c:23]12
Cc1cc(-n2ccnc2)cc(N)c1N.O=Cc1c(Cl)ncnc1Cl
Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(Cl)ncnc3Cl)nc12
null
null
CO
Aromatic Heterocycle Formation
Benzimidazole aldehyde
357211f0cea48f6066cc617c063d8f639b186739754abf69a9bef955d42b7d06
947e8e758a50553bad3d8f39fd1540e5051c4c73055f7a5a9da00894523e8ba0
c1cn(-c2ccc3nc(-c4cncnc4)[nH]c3c2)cn1
O=[CH;D2;+0:1]-[c;H0;D3;+0:2]1:[c:3](-[Cl;D1;H0:4]):[#7;a:5]:[c:6]:[#7;a:7]:[c:8]:1-[Cl;D1;H0:9].[NH2;D1;+0:10]-[c:11](:[c:12]):[c:13](-[NH2;D1;+0:14]):[c:15]>>[Cl;D1;H0:4]-[c:3]1:[#7;a:5]:[c:6]:[#7;a:7]:[c:8](-[Cl;D1;H0:9]):[c;H0;D3;+0:2]:1-[c;H0;D3;+0:1]1:[n;H0;D2;+0:14]:[c:13](:[c:15]):[c:11](:[c:12]):[nH;D2;+0:10]:...
55
[{"value": 55.0, "product": "ClC1=NC=NC(=C1C1=NC2=C(N1)C=C(C=C2C)N2C=NC=C2)Cl", "details": "PERCENTYIELD", "is_desired": false}, {"value": 54.3, "product": "ClC1=NC=NC(=C1C1=NC2=C(N1)C=C(C=C2C)N2C=NC=C2)Cl", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
14
HOUR
To a solution of 5-imidazol-1-yl-3-methyl-benzene-1,2-diamine (180 mg, 0.96 mmol) in methanol (4 mL) was added a solution of 4,6-dichloro-pyrimidine-5-carbaldehyde (183 mg, 0.96 mmol) in methanol (1 mL). The reaction mixture was stirred at room temperature for 14 h. After concentration, the residue was purified by flas...
10.6084/m9.figshare.5104873.v1
null
Aldehyde.Primary amine.Primary amine
null
c1ccccc1
c1ccc2[nH]cnc2c1
c1c[nH]cn1.c1ccc2[nH]cnc2c1.c1cncnc1
HO-
CO
null
14
Cc1cc(-n2ccnc2)cc(N)c1N.O=Cc1c(Cl)ncnc1Cl>CO>Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(Cl)ncnc3Cl)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-3ac54f15ce3d4d5b9b9fb46aa1c6e147
CC(C)(C)OC(=O)CC(=O)OC(C)(C)C.O=[N+]([O-])c1c(F)cc(F)cc1F>>CC(C)(C)OC(=O)C(C(=O)OC(C)(C)C)c1cc(F)cc(F)c1[N+](=O)[O-]
FC1=C(C(=CC(=C1)F)F)[N+](=O)[O-].[H-].[Na+].C(CC(=O)OC(C)(C)C)(=O)OC(C)(C)C>>C(C)(C)(C)OC(C(C(=O)OC(C)(C)C)C1=C(C(=CC(=C1)F)F)[N+](=O)[O-])=O
[CH3:1][C:2]([CH3:3])([CH3:4])[O:5][C:6](=[O:7])[CH2:8][C:9](=[O:10])[O:11][C:12]([CH3:13])([CH3:14])[CH3:15].F[c:16]1[cH:17][c:18]([F:19])[cH:20][c:21]([F:22])[c:23]1[N+:24](=[O:25])[O-:26]>>[CH3:1][C:2]([CH3:3])([CH3:4])[O:5][C:6](=[O:7])[CH:8]([C:9](=[O:10])[O:11][C:12]([CH3:13])([CH3:14])[CH3:15])[c:16]1[cH:17][c:1...
CC(C)(C)OC(=O)CC(=O)OC(C)(C)C.O=[N+]([O-])c1c(F)cc(F)cc1F
CC(C)(C)OC(=O)C(C(=O)OC(C)(C)C)c1cc(F)cc(F)c1[N+](=O)[O-]
null
null
CN(C)C=O
C-C Coupling
OtherReaction
5a1171068c2a10d196160f01101b1c97354196d6923cfc455c6b686284d6c6f2
c0fb657475d92a5e1ab643a3f03921ebe4d047c8d805f98b012a5df3f9fb1f6c
c1ccccc1
F-[c;H0;D3;+0:1](:[c:2]:[c:3]):[c:4](-[#7;+:5]):[c:6].[C;D1;H3:7]-[C:8](-[C;D1;H3:9])(-[C;D1;H3:10])-[#8:11]-[C:12](=[O;D1;H0:13])-[CH2;D2;+0:14]-[C:15](=[O;D1;H0:16])-[#8:17]-[C:18](-[C;D1;H3:19])(-[C;D1;H3:20])-[C;D1;H3:21]>>[#7;+:5]-[c:4](:[c:6]):[c;H0;D3;+0:1](-[CH;D3;+0:14](-[C:15](=[O;D1;H0:16])-[#8:17]-[C:18](-[...
null
[]
null
null
30
MINUTE
To a suspension of NaH (54.6 g, 60%, 1.365 mol) in 600 mL of DMF was added di-t-Butyl malonate (118 g, 0.546 mol) at 0° C. and stirred for 30 min. 2,4,6 trifluoronitrobenzene was added as a solution in 400 mL of DMF (75 g, 0.42 mol) over 3 hours and the solution stirred at ambient temperature for 12 hours. The reaction...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Ester.Ester
Ester.Ester
c1ccccc1
c1ccccc1
c1ccccc1
HF
CN(C)C=O
null
0.5
CC(C)(C)OC(=O)CC(=O)OC(C)(C)C.O=[N+]([O-])c1c(F)cc(F)cc1F>CN(C)C=O>CC(C)(C)OC(=O)C(C(=O)OC(C)(C)C)c1cc(F)cc(F)c1[N+](=O)[O-]
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-c906666b77984af38ebc24c91eac38d1
CC(C)(C)OC(=O)C(C(=O)OC(C)(C)C)c1cc(F)cc(F)c1[N+](=O)[O-].N>>CC(C)(C)OC(=O)C(C(=O)OC(C)(C)C)c1cc(F)cc(N)c1[N+](=O)[O-]
C(C)(C)(C)OC(C(C(=O)OC(C)(C)C)C1=C(C(=CC(=C1)F)F)[N+](=O)[O-])=O.N>>C(C)(C)(C)OC(C(C(=O)OC(C)(C)C)C1=C(C(=CC(=C1)F)N)[N+](=O)[O-])=O
F[c:21]1[cH:20][c:18]([F:19])[cH:17][c:16]([CH:8]([C:6]([O:5][C:2]([CH3:1])([CH3:3])[CH3:4])=[O:7])[C:9](=[O:10])[O:11][C:12]([CH3:13])([CH3:14])[CH3:15])[c:23]1[N+:24](=[O:25])[O-:26].[NH3:22]>>[CH3:1][C:2]([CH3:3])([CH3:4])[O:5][C:6](=[O:7])[CH:8]([C:9](=[O:10])[O:11][C:12]([CH3:13])([CH3:14])[CH3:15])[c:16]1[cH:17][...
CC(C)(C)OC(=O)C(C(=O)OC(C)(C)C)c1cc(F)cc(F)c1[N+](=O)[O-].N
CC(C)(C)OC(=O)C(C(=O)OC(C)(C)C)c1cc(F)cc(N)c1[N+](=O)[O-]
null
null
CO
Heteroatom Alkylation and Arylation
OtherReaction
5cea7b75c7f95cc50fd74029efa1cddce51f01200160afa4aaecfa45e52a1621
c5668f64a1395fa45312378ed819baaeafc354cdb673b20226ea2853ed14db5d
c1ccccc1
F-[c;H0;D3;+0:1](:[c:2]:[c:3]):[c:4](-[#7;+:5]):[c:6].[NH3;D0;+0:7]>>[#7;+:5]-[c:4](:[c:6]):[c;H0;D3;+0:1](-[NH2;D1;+0:7]):[c:2]:[c:3]
null
[]
85
CELSIUS
null
null
To the crude 2-(3,5-Difluoro-2-nitro-phenyl)-malonic acid di-tert-butyl ester (62 g, 0.42 mol) was added 700 mL of 2M ammonia in methanol in a pressure bottle. The vessel was sealed and heated to 85° C. for 18 hours. The reaction mixture was cooled and the vessel opened carefully and the methanol solution concentrated ...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide
Primary amine
c1ccccc1
c1ccccc1
c1ccccc1
HF
CO
85
null
CC(C)(C)OC(=O)C(C(=O)OC(C)(C)C)c1cc(F)cc(F)c1[N+](=O)[O-].N>CO>CC(C)(C)OC(=O)C(C(=O)OC(C)(C)C)c1cc(F)cc(N)c1[N+](=O)[O-]
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-ae98883c29bc486cb8fa1214b299bb7a
CC(C)(C)OC(=O)C(C(=O)OC(C)(C)C)c1cc(F)cc(N)c1[N+](=O)[O-]>>Nc1cc(F)cc(CC(=O)O)c1[N+](=O)[O-]
C(C)(C)(C)OC(C(C(=O)OC(C)(C)C)C1=C(C(=CC(=C1)F)N)[N+](=O)[O-])=O.O>>NC=1C(=C(C=C(C1)F)CC(=O)O)[N+](=O)[O-]
CC(C)(C)OC(=O)[CH:8]([c:7]1[cH:6][c:4]([F:5])[cH:3][c:2]([NH2:1])[c:12]1[N+:13](=[O:14])[O-:15])[C:9](=[O:10])[O:11]C(C)(C)C>>[NH2:1][c:2]1[cH:3][c:4]([F:5])[cH:6][c:7]([CH2:8][C:9](=[O:10])[OH:11])[c:12]1[N+:13](=[O:14])[O-:15]
CC(C)(C)OC(=O)C(C(=O)OC(C)(C)C)c1cc(F)cc(N)c1[N+](=O)[O-]
Nc1cc(F)cc(CC(=O)O)c1[N+](=O)[O-]
null
null
Cl.O1CCOCC1
Reduction
OtherReaction
73d165f371e7be9e7ac8a17da558f54492bf9b0746a90d7cc3220d78efbe0c09
60f3a79f391ea73b07965c28fa39ab5eb6558d5e98c32a693ba93254730088b7
c1ccccc1
C-C(-C)(-C)-O-C(=O)-[CH;D3;+0:1](-[C:2](=[O;D1;H0:3])-[O;H0;D2;+0:4]-C(-C)(-C)-C)-[c:5](:[c:6]):[c:7]>>[O;D1;H0:3]=[C:2](-[OH;D1;+0:4])-[CH2;D2;+0:1]-[c:5](:[c:6]):[c:7]
null
[]
40
CELSIUS
null
null
To the 2-(3-Amino-5-fluoro-2-nitro-phenyl)-malonic acid di-tert-butyl ester (140 g) in 500 mL of 4N HCl in dioxane was added 50 mL of water and heated to 40° C. for 2 days. The solution was extracted with ethyl acetate (3×'s) and the ethyl acetate washed with water (3×'s) and brine. The organic fraction was dried over ...
10.6084/m9.figshare.5104873.v1
null
Ester.Ester.Boc.Boc
Carboxylic acid
null
null
c1ccccc1
HO-
Cl.O1CCOCC1
40
null
CC(C)(C)OC(=O)C(C(=O)OC(C)(C)C)c1cc(F)cc(N)c1[N+](=O)[O-]>Cl.O1CCOCC1>Nc1cc(F)cc(CC(=O)O)c1[N+](=O)[O-]
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-0e1d92b6b2bb4884b6c3f6b0a7867493
Nc1cc(F)cc(CC(=O)O)c1[N+](=O)[O-]>>Cc1cc(F)cc(N)c1[N+](=O)[O-]
NC=1C(=C(C=C(C1)F)CC(=O)O)[N+](=O)[O-].CO>>NC1=C(C(=CC(=C1)F)C)[N+](=O)[O-]
O=C(O)[CH2:1][c:2]1[cH:3][c:4]([F:5])[cH:6][c:7]([NH2:8])[c:9]1[N+:10](=[O:11])[O-:12]>>[CH3:1][c:2]1[cH:3][c:4]([F:5])[cH:6][c:7]([NH2:8])[c:9]1[N+:10](=[O:11])[O-:12]
Nc1cc(F)cc(CC(=O)O)c1[N+](=O)[O-]
Cc1cc(F)cc(N)c1[N+](=O)[O-]
null
null
C(C)#N
Reduction
OtherReaction
1dcdb0afd061fc08423f0103da81d9d30c22c6dc8004c40ee82cae1f931e4d18
292164ffdf89eeb341ee9424f24084b252a703a26bb77721b558b0f8a8528c45
c1ccccc1
O-C(=O)-[CH2;D2;+0:1]-[c:2](:[c:3]):[c:4]>>[CH3;D1;+0:1]-[c:2](:[c:3]):[c:4]
103.2
[{"value": 103.2, "product": "NC1=C(C(=CC(=C1)F)C)[N+](=O)[O-]", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
null
null
To the crude 3-Amino-5-fluoro-2-nitro phenyl acetic acid (3.6 g, 16.8 mmol) was added Cu2O (10.1 g, 70.6 mmol) in 120 mL of acetonitrile along with 50 uL of methanol and the suspension was refluxed for 12 hours. The reaction mixture was filtered through Celite and the Celite pad washed with water and ethyl acetate. The...
10.6084/m9.figshare.5104873.v1
null
Carboxylic acid
null
null
null
c1ccccc1
Other
C(C)#N
null
null
Nc1cc(F)cc(CC(=O)O)c1[N+](=O)[O-]>C(C)#N>Cc1cc(F)cc(N)c1[N+](=O)[O-]
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-9a2fc936f9594840b92354ee9937ee3d
C1COCCN1.Cc1cc(Br)cc([N+](=O)[O-])c1N>>Cc1cc(N2CCOCC2)cc([N+](=O)[O-])c1N
BrC1=CC(=C(N)C(=C1)[N+](=O)[O-])C.N1CCOCC1.C(C)(C)(C)P(C1=C(C=CC=C1)C1=CC=CC=C1)C(C)(C)C.CC(C)([O-])C.[Na+]>>CC1=C(C(=CC(=C1)N1CCOCC1)[N+](=O)[O-])N
[NH:5]1[CH2:6][CH2:7][O:8][CH2:9][CH2:10]1.Br[c:4]1[cH:3][c:2]([CH3:1])[c:16]([NH2:17])[c:12]([N+:13](=[O:14])[O-:15])[cH:11]1>>[CH3:1][c:2]1[cH:3][c:4]([N:5]2[CH2:6][CH2:7][O:8][CH2:9][CH2:10]2)[cH:11][c:12]([N+:13](=[O:14])[O-:15])[c:16]1[NH2:17]
C1COCCN1.Cc1cc(Br)cc([N+](=O)[O-])c1N
Cc1cc(N2CCOCC2)cc([N+](=O)[O-])c1N
null
C=1C=CC(=CC1)/C=C/C(=O)/C=C/C2=CC=CC=C2.C=1C=CC(=CC1)/C=C/C(=O)/C=C/C2=CC=CC=C2.C=1C=CC(=CC1)/C=C/C(=O)/C=C/C2=CC=CC=C2.[Pd].[Pd]
C1CCOC1
Heteroatom Alkylation and Arylation
Ullmann-Goldberg Substitution amine
a47b7d43ef99c1989f39629bd45f903079b03ac5a9d702fdbffdae93a63a79cd
b6b8e2cdb45054a35f5e8157d624f852c0601a09401556706e166b19536eb7a7
c1ccc(N2CCOCC2)cc1
Br-[c;H0;D3;+0:1](:[c:2]:[c:3]):[c:4]:[c:5].[#8:6]1-[C:7]-[C:8]-[NH;D2;+0:9]-[C:10]-[C:11]-1>>[c:3]:[c:2]:[c;H0;D3;+0:1](-[N;H0;D3;+0:9]1-[C:10]-[C:11]-[#8:6]-[C:7]-[C:8]-1):[c:4]:[c:5]
null
[]
85
CELSIUS
3
DAY
To a 800 ml pressure flask was added Tris(dibenzylideneacetone)dipalladium (2.64 g, 2.88 mmol), 2-(Di-t-butylphosphino)biphenyl (1.42 g, 4.75 mmol) and sodium tert-butoxide (17.5 g, 182 mmol). Then dry THF (500 mL), 4-bromo-2-methyl-6-nitroaniline (30.0 g, 130 mmol) and morpholine (34 ml, 390 mmol) were added. Argon wa...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Secondary amine
Tertiary amine
C1COCCN1.c1ccccc1
c1ccccc1.C1COCC[NH]1
c1ccccc1.C1COCC[NH]1
HBr
C=1C=CC(=CC1)/C=C/C(=O)/C=C/C2=CC=CC=C2.C=1C=CC(=CC1)/C=C/C(=O)/C=C/C2=CC=CC=C2.C=1C=CC(=CC1)/C=C/C(=O)/C=C/C2=CC=CC=C2.[Pd].[Pd].C1CCOC1
85
72
C1COCCN1.Cc1cc(Br)cc([N+](=O)[O-])c1N>C=1C=CC(=CC1)/C=C/C(=O)/C=C/C2=CC=CC=C2.C=1C=CC(=CC1)/C=C/C(=O)/C=C/C2=CC=CC=C2.C=1C=CC(=CC1)/C=C/C(=O)/C=C/C2=CC=CC=C2.[Pd].[Pd].C1CCOC1>Cc1cc(N2CCOCC2)cc([N+](=O)[O-])c1N
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-8941fe6b357b4ce0a624b54fdaa3df7f
COc1nccc(I)c1C=O.Cc1cc(N2CCOCC2)cc([N+](=O)[O-])c1N>>COc1nccc(I)c1-c1nc2c(C)cc(N3CCOCC3)cc2[nH]1
IC1=C(C(=NC=C1)OC)C=O.CC1=C(C(=CC(=C1)N1CCOCC1)[N+](=O)[O-])N.[H][H]>>IC1=C(C(=NC=C1)OC)C1=NC2=C(N1)C=C(C=C2C)N2CCOCC2
O=[CH:10][c:9]1[c:3]([O:2][CH3:1])[n:4][cH:5][cH:6][c:7]1[I:8].O=[N+:25]([O-])[c:24]1[c:12]([NH2:11])[c:13]([CH3:14])[cH:15][c:16]([N:17]2[CH2:18][CH2:19][O:20][CH2:21][CH2:22]2)[cH:23]1>>[CH3:1][O:2][c:3]1[n:4][cH:5][cH:6][c:7]([I:8])[c:9]1-[c:10]1[n:11][c:12]2[c:13]([CH3:14])[cH:15][c:16]([N:17]3[CH2:18][CH2:19][O:20...
COc1nccc(I)c1C=O.Cc1cc(N2CCOCC2)cc([N+](=O)[O-])c1N
COc1nccc(I)c1-c1nc2c(C)cc(N3CCOCC3)cc2[nH]1
null
[Pd]
CO
Aromatic Heterocycle Formation
OtherReaction
6161308e092fb05dde676728d8c9bfcf96275c4c41363553beada2b38c1d58af
46498ab5071aa0a2ab021e592d13610349d3200939c6e7581494a316286b7467
c1cncc(-c2nc3ccc(N4CCOCC4)cc3[nH]2)c1
O=[CH;D2;+0:1]-[c;H0;D3;+0:2]1:[c:3](-[#8:4]):[#7;a:5]:[c:6]:[c:7]:[c:8]:1-[I;D1;H0:9].O=[N+;H0;D3:10](-[O-])-[c:11](:[c:12]):[c:13](-[NH2;D1;+0:14]):[c:15]>>[#8:4]-[c:3]1:[#7;a:5]:[c:6]:[c:7]:[c:8](-[I;D1;H0:9]):[c;H0;D3;+0:2]:1-[c;H0;D3;+0:1]1:[n;H0;D2;+0:14]:[c:13](:[c:15]):[c:11](:[c:12]):[nH;D2;+0:10]:1
51
[{"value": 51.0, "product": null, "details": "PERCENTYIELD", "is_desired": false}]
0
CELSIUS
null
null
2-Methyl-4-morpholin-4-yl-6-nitro-phenylamine (15.2 g, 64 mmol) was suspended in methanol (200 ml) in a PARR flask. Palladium on carbon (1.0 g, 10% Pd) was added and the suspension shaken under 60 psi of hydrogen overnight. The mixture was filtered through a pad of celite (under argon) into a 3-neck flask, the celite r...
10.6084/m9.figshare.5104873.v1
null
Aldehyde.Nitro group.Primary amine
null
c1ccccc1
c1ccc2[nH]cnc2c1
c1ccncc1.c1ccc2[nH]cnc2c1.C1COCC[NH]1
HO-
[Pd].CO
0
null
COc1nccc(I)c1C=O.Cc1cc(N2CCOCC2)cc([N+](=O)[O-])c1N>[Pd].CO>COc1nccc(I)c1-c1nc2c(C)cc(N3CCOCC3)cc2[nH]1
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-288035b9ce3f40df81acfcf242399ce5
CC(C)(C)OC(=O)N1CCNCC1.Cc1cc(F)cc(N)c1[N+](=O)[O-]>>Cc1cc(N2CCN(C(=O)OC(C)(C)C)CC2)cc(N)c1[N+](=O)[O-]
FC=1C=C(C(=C(C1)N)[N+](=O)[O-])C.C(=O)(OC(C)(C)C)N1CCNCC1.CN1CCOCC1>>C(C)(C)(C)OC(=O)N1CCN(CC1)C1=CC(=C(C(=C1)C)[N+](=O)[O-])N
[NH:5]1[CH2:6][CH2:7][N:8]([C:9](=[O:10])[O:11][C:12]([CH3:13])([CH3:14])[CH3:15])[CH2:16][CH2:17]1.F[c:4]1[cH:3][c:2]([CH3:1])[c:21]([N+:22](=[O:23])[O-:24])[c:19]([NH2:20])[cH:18]1>>[CH3:1][c:2]1[cH:3][c:4]([N:5]2[CH2:6][CH2:7][N:8]([C:9](=[O:10])[O:11][C:12]([CH3:13])([CH3:14])[CH3:15])[CH2:16][CH2:17]2)[cH:18][c:19...
CC(C)(C)OC(=O)N1CCNCC1.Cc1cc(F)cc(N)c1[N+](=O)[O-]
Cc1cc(N2CCN(C(=O)OC(C)(C)C)CC2)cc(N)c1[N+](=O)[O-]
null
null
C(C)(=O)OCC.CN1CCCC1=O
Heteroatom Alkylation and Arylation
Buchwald-Hartwig/Ullmann-Goldberg/N-arylation secondary amine
75de53007ec0cb91435746fdefbf3b121f745fc71ddebd19c6e45a5212b3f56a
b6b8e2cdb45054a35f5e8157d624f852c0601a09401556706e166b19536eb7a7
c1ccc(N2CCNCC2)cc1
F-[c;H0;D3;+0:1](:[c:2]:[c:3]):[c:4]:[c:5].[#7:6]1-[C:7]-[C:8]-[NH;D2;+0:9]-[C:10]-[C:11]-1>>[c:3]:[c:2]:[c;H0;D3;+0:1](-[N;H0;D3;+0:9]1-[C:8]-[C:7]-[#7:6]-[C:11]-[C:10]-1):[c:4]:[c:5]
83
[{"value": 83.0, "product": "C(C)(C)(C)OC(=O)N1CCN(CC1)C1=CC(=C(C(=C1)C)[N+](=O)[O-])N", "details": "PERCENTYIELD", "is_desired": false}, {"value": 82.4, "product": "C(C)(C)(C)OC(=O)N1CCN(CC1)C1=CC(=C(C(=C1)C)[N+](=O)[O-])N", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
8
HOUR
To a stirred solution of 3-fluoro-5-amino-6-nitrotoluene (10 g, 58.79 mmol) in anhydrous NMP (160 mL) under nitrogen was added BOC-piperazine (39 g, 209.4 mmol) and 4-methylmorpholine (25.9 mL). The resulting dark solution was heated to reflux for 72 h, cooled to room temperature and diluted with ethyl acetate (4000 mL...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Secondary amine
Tertiary amine
C1CNCC[NH]1.c1ccccc1
c1ccccc1.C1C[NH]CC[NH]1
c1ccccc1.C1C[NH]CC[NH]1
HF
C(C)(=O)OCC.CN1CCCC1=O
null
8
CC(C)(C)OC(=O)N1CCNCC1.Cc1cc(F)cc(N)c1[N+](=O)[O-]>C(C)(=O)OCC.CN1CCCC1=O>Cc1cc(N2CCN(C(=O)OC(C)(C)C)CC2)cc(N)c1[N+](=O)[O-]
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-2f0509400de4444ab9a8454d2b905f7f
Cc1cc(N2CCN(C(=O)OC(C)(C)C)CC2)cc(N)c1[N+](=O)[O-]>>Cc1cc(N2CCN(C(=O)OC(C)(C)C)CC2)cc(N)c1N
C(C)(C)(C)OC(=O)N1CCN(CC1)C1=CC(=C(C(=C1)C)[N+](=O)[O-])N>>C(C)(C)(C)OC(=O)N1CCN(CC1)C1=CC(=C(C(=C1)C)N)N
O=[N+:22]([O-])[c:21]1[c:2]([CH3:1])[cH:3][c:4]([N:5]2[CH2:6][CH2:7][N:8]([C:9](=[O:10])[O:11][C:12]([CH3:13])([CH3:14])[CH3:15])[CH2:16][CH2:17]2)[cH:18][c:19]1[NH2:20]>>[CH3:1][c:2]1[cH:3][c:4]([N:5]2[CH2:6][CH2:7][N:8]([C:9](=[O:10])[O:11][C:12]([CH3:13])([CH3:14])[CH3:15])[CH2:16][CH2:17]2)[cH:18][c:19]([NH2:20])[c...
Cc1cc(N2CCN(C(=O)OC(C)(C)C)CC2)cc(N)c1[N+](=O)[O-]
Cc1cc(N2CCN(C(=O)OC(C)(C)C)CC2)cc(N)c1N
null
[OH-].[OH-].[Pd+2]
CO
Reduction
Reduction of nitro groups to amines
bbc242b150a51e69d3ad1caaa391f4422710431b398dcb880555f476706790be
7b0317532ea57a4fcedc1efc3e3c22eb5238d1c8330da53d4f9801fc2391f567
c1ccc(N2CCNCC2)cc1
O=[N+;H0;D3:1](-[O-])-[c:2](:[c:3]):[c:4]>>[NH2;D1;+0:1]-[c:2](:[c:3]):[c:4]
null
[]
null
null
8
HOUR
To a stirred solution of 4-(3-Amino-5-methyl-4-nitro-phenyl)-piperazine-1-carboxylic acid tert-butyl ester (15 g, 44.6 mmol) in methanol (2200 mL) was added 20% Pd(OH)2/C (1.6 g) and the suspension flushed well with nitrogen, followed by hydrogen. The resulting suspension was stirred overnight at room temperature under...
10.6084/m9.figshare.5104873.v1
null
Nitro group
Primary amine
null
null
c1ccccc1.C1C[NH]CC[NH]1
Other
[OH-].[OH-].[Pd+2].CO
null
8
Cc1cc(N2CCN(C(=O)OC(C)(C)C)CC2)cc(N)c1[N+](=O)[O-]>[OH-].[OH-].[Pd+2].CO>Cc1cc(N2CCN(C(=O)OC(C)(C)C)CC2)cc(N)c1N
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-94d85650d7304a0aa776d5e084ec41e8
COc1nccc(I)c1C=O.Cc1cc(N2CCN(C(=O)OC(C)(C)C)CC2)cc(N)c1N>>COc1nccc(I)c1-c1nc2c(C)cc(N3CCN(C(=O)OC(C)(C)C)CC3)cc2[nH]1
C(C)(C)(C)OC(=O)N1CCN(CC1)C1=CC(=C(C(=C1)C)N)N.IC1=C(C(=NC=C1)OC)C=O>>C(C)(C)(C)OC(=O)N1CCN(CC1)C1=CC2=C(N=C(N2)C=2C(=NC=CC2I)OC)C(=C1)C
O=[CH:10][c:9]1[c:3]([O:2][CH3:1])[n:4][cH:5][cH:6][c:7]1[I:8].[NH2:11][c:12]1[c:13]([CH3:14])[cH:15][c:16]([N:17]2[CH2:18][CH2:19][N:20]([C:21](=[O:22])[O:23][C:24]([CH3:25])([CH3:26])[CH3:27])[CH2:28][CH2:29]2)[cH:30][c:31]1[NH2:32]>>[CH3:1][O:2][c:3]1[n:4][cH:5][cH:6][c:7]([I:8])[c:9]1-[c:10]1[n:11][c:12]2[c:13]([CH...
COc1nccc(I)c1C=O.Cc1cc(N2CCN(C(=O)OC(C)(C)C)CC2)cc(N)c1N
COc1nccc(I)c1-c1nc2c(C)cc(N3CCN(C(=O)OC(C)(C)C)CC3)cc2[nH]1
null
null
CO
Aromatic Heterocycle Formation
Benzimidazole aldehyde
357211f0cea48f6066cc617c063d8f639b186739754abf69a9bef955d42b7d06
947e8e758a50553bad3d8f39fd1540e5051c4c73055f7a5a9da00894523e8ba0
c1cncc(-c2nc3ccc(N4CCNCC4)cc3[nH]2)c1
O=[CH;D2;+0:1]-[c;H0;D3;+0:2]1:[c:3](-[#8:4]):[#7;a:5]:[c:6]:[c:7]:[c:8]:1-[I;D1;H0:9].[NH2;D1;+0:10]-[c:11](:[c:12]):[c:13](-[NH2;D1;+0:14]):[c:15]>>[#8:4]-[c:3]1:[#7;a:5]:[c:6]:[c:7]:[c:8](-[I;D1;H0:9]):[c;H0;D3;+0:2]:1-[c;H0;D3;+0:1]1:[n;H0;D2;+0:10]:[c:11](:[c:12]):[c:13](:[c:15]):[nH;D2;+0:14]:1
null
[]
0
CELSIUS
30
MINUTE
To a stirred solution of 4-(3,4-Diamino-5-methyl-phenyl)-piperazine-1-carboxylic acid tert-butyl ester (44.6 mmol—assuming 100% conversion in previous step) in methanol (ca 2700 mL) at 0° C under a nitrogen atmosphere was slowly added (2 h) via addition funnel, a solution of 4-iodo-2-methoxy-pyridine-3-carbaldehyde (15...
10.6084/m9.figshare.5104873.v1
null
Aldehyde.Primary amine.Primary amine
null
c1ccccc1
c1ccc2[nH]cnc2c1
c1ccncc1.c1ccc2[nH]cnc2c1.C1C[NH]CC[NH]1
HO-
CO
0
0.5
COc1nccc(I)c1C=O.Cc1cc(N2CCN(C(=O)OC(C)(C)C)CC2)cc(N)c1N>CO>COc1nccc(I)c1-c1nc2c(C)cc(N3CCN(C(=O)OC(C)(C)C)CC3)cc2[nH]1
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-ff01f46f643c444d89ba3edcdaef3be8
COc1nccc(I)c1-c1nc2c(C)cc(N3CCN(C(=O)OC(C)(C)C)CC3)cc2[nH]1>>Cc1cc(N2CCNCC2)cc2[nH]c(-c3c(I)cc[nH]c3=O)nc12
C(C)(C)(C)OC(=O)N1CCN(CC1)C1=CC2=C(N=C(N2)C=2C(=NC=CC2I)OC)C(=C1)C.Cl>>IC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCNCC2
CC(C)(C)OC(=O)[N:8]1[CH2:7][CH2:6][N:5]([c:4]2[cH:3][c:2]([CH3:1])[c:24]3[c:12]([cH:11]2)[nH:13][c:14](-[c:15]2[c:16]([I:17])[cH:18][cH:19][n:20][c:21]2[O:22]C)[n:23]3)[CH2:10][CH2:9]1>>[CH3:1][c:2]1[cH:3][c:4]([N:5]2[CH2:6][CH2:7][NH:8][CH2:9][CH2:10]2)[cH:11][c:12]2[nH:13][c:14](-[c:15]3[c:16]([I:17])[cH:18][cH:19][n...
COc1nccc(I)c1-c1nc2c(C)cc(N3CCN(C(=O)OC(C)(C)C)CC3)cc2[nH]1
Cc1cc(N2CCNCC2)cc2[nH]c(-c3c(I)cc[nH]c3=O)nc12
null
null
O1CCOCC1
Functional Group Interconversion
OtherReaction
438071654f502827dd43c25cca1177deb9ce031069f2d425f7eae572276ce1b7
9b5a00614c71e118fcd337401ca701336e66758b207ecdcc06f62c72fe79cd65
O=c1[nH]cccc1-c1nc2ccc(N3CCNCC3)cc2[nH]1
C-C(-C)(-C)-O-C(=O)-[N;H0;D3;+0:1]1-[C:2]-[C:3]-[#7:4]-[C:5]-[C:6]-1.C-[O;H0;D2;+0:7]-[c;H0;D3;+0:8]1:[n;H0;D2;+0:9]:[c:10]:[c:11]:[c:12]:[c:13]:1-[c:14](:[#7;a:15]):[#7;a:16]>>[#7;a:15]:[c:14](-[c:13]1:[c:12]:[c:11]:[c:10]:[nH;D2;+0:9]:[c;H0;D3;+0:8]:1=[O;H0;D1;+0:7]):[#7;a:16].[#7:4]1-[C:5]-[C:6]-[NH;D2;+0:1]-[C:2]-[...
93.1
[{"value": 93.0, "product": "IC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCNCC2", "details": "PERCENTYIELD", "is_desired": false}, {"value": 93.1, "product": "IC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCNCC2", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
75
CELSIUS
null
null
To a stirred solution of 4-[2-(4-Iodo-2-methoxy-pyridin-3-yl)-7-methyl-3H-benzoimidazol-5-yl]-piperazine-1-carboxylic acid tert-butyl ester (24 g, 43.7 mmol) was added 1,4-dioxane (750 mL) and 6 N aqueous HCl (30 mL) and the mixture was heated to 75° C. overnight. The solution was cooled to room temperature, the supern...
10.6084/m9.figshare.5104873.v1
null
Carbamic ester.Ether.Ether.Boc
Secondary amine
C1C[NH]CC[NH]1.c1ccncc1
C1C[NH]CCN1.c1cccnc1
C1C[NH]CCN1.c1ccc2[nH]cnc2c1.c1cccnc1
HO-
O1CCOCC1
75
null
COc1nccc(I)c1-c1nc2c(C)cc(N3CCN(C(=O)OC(C)(C)C)CC3)cc2[nH]1>O1CCOCC1>Cc1cc(N2CCNCC2)cc2[nH]c(-c3c(I)cc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-fe2414a2165344779d576d356e6081a9
CC(C)(C)OC(=O)NC1CCNCC1.Cc1cc(F)cc(N)c1[N+](=O)[O-]>>Cc1cc(N2CCC(NC(=O)OC(C)(C)C)CC2)cc(N)c1[N+](=O)[O-]
FC=1C=C(C(=C(C1)N)[N+](=O)[O-])C.CC(C)(C)OC(=O)NC1CCNCC1.C(=O)(O)[O-].[Na+]>>C(C)(C)(C)OC(NC1CCN(CC1)C1=CC(=C(C(=C1)C)[N+](=O)[O-])N)=O
[NH:5]1[CH2:6][CH2:7][CH:8]([NH:9][C:10](=[O:11])[O:12][C:13]([CH3:14])([CH3:15])[CH3:16])[CH2:17][CH2:18]1.F[c:4]1[cH:3][c:2]([CH3:1])[c:22]([N+:23](=[O:24])[O-:25])[c:20]([NH2:21])[cH:19]1>>[CH3:1][c:2]1[cH:3][c:4]([N:5]2[CH2:6][CH2:7][CH:8]([NH:9][C:10](=[O:11])[O:12][C:13]([CH3:14])([CH3:15])[CH3:16])[CH2:17][CH2:1...
CC(C)(C)OC(=O)NC1CCNCC1.Cc1cc(F)cc(N)c1[N+](=O)[O-]
Cc1cc(N2CCC(NC(=O)OC(C)(C)C)CC2)cc(N)c1[N+](=O)[O-]
null
null
CS(=O)C
Heteroatom Alkylation and Arylation
Buchwald-Hartwig/Ullmann-Goldberg/N-arylation secondary amine
ad5ec9c4592e4dee5877fc4f1309a503a378773e18ebc21adf780b709f6e28c5
b6b8e2cdb45054a35f5e8157d624f852c0601a09401556706e166b19536eb7a7
c1ccc(N2CCCCC2)cc1
F-[c;H0;D3;+0:1](:[c:2]:[c:3]):[c:4]:[c:5].[C:6]-[C:7]-[NH;D2;+0:8]-[C:9]-[C:10]>>[C:6]-[C:7]-[N;H0;D3;+0:8](-[c;H0;D3;+0:1](:[c:2]:[c:3]):[c:4]:[c:5])-[C:9]-[C:10]
null
[]
85
CELSIUS
3
HOUR
5-Fluoro-3-methyl-2-nitro-phenylamine (0.97 g, 5.7 mmol), 4-N-BOC-aminopiperidine (1.60 g, 8.0 mmol), diusopropylethylamine (2.5 ml, 14 mmol) and DMSO (10 ml) are combined and stirred at 85° C. for 3 hours. The reaction mixture was poured on saturated aqueous NaHCO3 solution and extracted with ethyl acetate. The organi...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Secondary amine
Tertiary amine
C1CCNCC1.c1ccccc1
c1ccccc1.C1CC[NH]CC1
c1ccccc1.C1CC[NH]CC1
HF
CS(=O)C
85
3
CC(C)(C)OC(=O)NC1CCNCC1.Cc1cc(F)cc(N)c1[N+](=O)[O-]>CS(=O)C>Cc1cc(N2CCC(NC(=O)OC(C)(C)C)CC2)cc(N)c1[N+](=O)[O-]
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-c00c9a603aee440dbcf4d3a14095b221
COc1nccc(I)c1C=O.Cc1cc(N2CCC(NC(=O)OC(C)(C)C)CC2)cc(N)c1[N+](=O)[O-]>>COc1nccc(I)c1-c1nc2c(C)cc(N3CCC(NC(=O)OC(C)(C)C)CC3)cc2[nH]1
C(C)(C)(C)OC(NC1CCN(CC1)C1=CC(=C(C(=C1)C)[N+](=O)[O-])N)=O.[H][H].IC1=C(C(=NC=C1)OC)C=O>>C(C)(C)(C)OC(NC1CCN(CC1)C1=CC2=C(N=C(N2)C=2C(=NC=CC2I)OC)C(=C1)C)=O
O=[CH:10][c:9]1[c:3]([O:2][CH3:1])[n:4][cH:5][cH:6][c:7]1[I:8].O=[N+:11]([O-])[c:12]1[c:13]([CH3:14])[cH:15][c:16]([N:17]2[CH2:18][CH2:19][CH:20]([NH:21][C:22](=[O:23])[O:24][C:25]([CH3:26])([CH3:27])[CH3:28])[CH2:29][CH2:30]2)[cH:31][c:32]1[NH2:33]>>[CH3:1][O:2][c:3]1[n:4][cH:5][cH:6][c:7]([I:8])[c:9]1-[c:10]1[n:11][c...
COc1nccc(I)c1C=O.Cc1cc(N2CCC(NC(=O)OC(C)(C)C)CC2)cc(N)c1[N+](=O)[O-]
COc1nccc(I)c1-c1nc2c(C)cc(N3CCC(NC(=O)OC(C)(C)C)CC3)cc2[nH]1
null
[Pd]
CO
Aromatic Heterocycle Formation
OtherReaction
6161308e092fb05dde676728d8c9bfcf96275c4c41363553beada2b38c1d58af
46498ab5071aa0a2ab021e592d13610349d3200939c6e7581494a316286b7467
c1cncc(-c2nc3ccc(N4CCCCC4)cc3[nH]2)c1
O=[CH;D2;+0:1]-[c;H0;D3;+0:2]1:[c:3](-[#8:4]):[#7;a:5]:[c:6]:[c:7]:[c:8]:1-[I;D1;H0:9].O=[N+;H0;D3:10](-[O-])-[c:11](:[c:12]):[c:13](-[NH2;D1;+0:14]):[c:15]>>[#8:4]-[c:3]1:[#7;a:5]:[c:6]:[c:7]:[c:8](-[I;D1;H0:9]):[c;H0;D3;+0:2]:1-[c;H0;D3;+0:1]1:[n;H0;D2;+0:10]:[c:11](:[c:12]):[c:13](:[c:15]):[nH;D2;+0:14]:1
null
[]
0
CELSIUS
8
HOUR
[1-(3-Amino-5-methyl-4-nitro-phenyl)-piperidin-4-yl]-carbamic acid tert-butyl ester (1.54 g, 4.4 mmol) was dissolved in methanol (100 ml). Palladium on carbon (0.3 g, 10% Pd) was added and the suspension stirred vigorously under a balloon pressure of hydrogen overnight. The mixture was filtered through a pad of celite ...
10.6084/m9.figshare.5104873.v1
null
Aldehyde.Nitro group.Primary amine
null
c1ccccc1
c1ccc2[nH]cnc2c1
c1ccncc1.c1ccc2[nH]cnc2c1.C1CC[NH]CC1
HO-
[Pd].CO
0
8
COc1nccc(I)c1C=O.Cc1cc(N2CCC(NC(=O)OC(C)(C)C)CC2)cc(N)c1[N+](=O)[O-]>[Pd].CO>COc1nccc(I)c1-c1nc2c(C)cc(N3CCC(NC(=O)OC(C)(C)C)CC3)cc2[nH]1
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-8899647ae100409b9ed8d63a864996ee
N#Cc1cc(Br)c2nc(-c3c(NC[C@@H](O)c4cccc(Cl)c4)cc[nH]c3=O)[nH]c2c1.O>>O=Cc1cc(Br)c2nc(-c3c(NC[C@@H](O)c4cccc(Cl)c4)cc[nH]c3=O)[nH]c2c1
O.CCOC(=O)C.BrC1=CC(=CC2=C1N=C(N2)C=2C(NC=CC2NC[C@@H](O)C2=CC(=CC=C2)Cl)=O)C#N.CC(C)C[AlH]CC(C)C>>BrC1=CC(=CC2=C1N=C(N2)C=2C(NC=CC2NC[C@@H](O)C2=CC(=CC=C2)Cl)=O)C=O
N#[C:2][c:3]1[cH:4][c:5]([Br:6])[c:7]2[n:8][c:9](-[c:10]3[c:11]([NH:12][CH2:13][C@@H:14]([OH:15])[c:16]4[cH:17][cH:18][cH:19][c:20]([Cl:21])[cH:22]4)[cH:23][cH:24][nH:25][c:26]3=[O:27])[nH:28][c:29]2[cH:30]1.[OH2:1]>>[O:1]=[CH:2][c:3]1[cH:4][c:5]([Br:6])[c:7]2[n:8][c:9](-[c:10]3[c:11]([NH:12][CH2:13][C@@H:14]([OH:15])[...
N#Cc1cc(Br)c2nc(-c3c(NC[C@@H](O)c4cccc(Cl)c4)cc[nH]c3=O)[nH]c2c1.O
O=Cc1cc(Br)c2nc(-c3c(NC[C@@H](O)c4cccc(Cl)c4)cc[nH]c3=O)[nH]c2c1
null
null
C1CCOC1
Heteroatom Alkylation and Arylation
OtherReaction
26082e4725cd2a7c1eb6362fc44981286c2087c015aba2f1b570103659ffb41e
e783d65987caa6ceae095ff666413e4c8d25ead96c003eb4f99d66fc68c0b0bb
O=c1[nH]ccc(NCCc2ccccc2)c1-c1nc2ccccc2[nH]1
N#[C;H0;D2;+0:1]-[c:2](:[c:3]):[c:4]:[c:5]:[#7;a:6].[OH2;D0;+0:7]>>[#7;a:6]:[c:5]:[c:4]:[c:2](-[CH;D2;+0:1]=[O;H0;D1;+0:7]):[c:3]
43
[{"value": 43.0, "product": "BrC1=CC(=CC2=C1N=C(N2)C=2C(NC=CC2NC[C@@H](O)C2=CC(=CC=C2)Cl)=O)C=O", "details": "PERCENTYIELD", "is_desired": false}]
-40
CELSIUS
10
HOUR
To a solution of (S)-7-Bromo-2-{4-[2-(3-chloro-phenyl)-2-hydroxy-ethylamino]-2-oxo-1,2-dihydro-pyridin-3-yl}-3H-benzimidazole-5-carbonitrile (150 mg, 0.31 mmol) in THF (50 mL) was added DIBAL-H (1 M toluene solution, 1.55 mL, 1.55 mmol) at −78° C. The reaction mixture was stirred at −40° C. for 10 h and cooled to −78° ...
10.6084/m9.figshare.5104873.v1
null
Nitrile
Aldehyde
null
null
c1ccc2[nH]cnc2c1.c1ccccc1.c1cccnc1
Other
C1CCOC1
-40
10
N#Cc1cc(Br)c2nc(-c3c(NC[C@@H](O)c4cccc(Cl)c4)cc[nH]c3=O)[nH]c2c1.O>C1CCOC1>O=Cc1cc(Br)c2nc(-c3c(NC[C@@H](O)c4cccc(Cl)c4)cc[nH]c3=O)[nH]c2c1
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-d952351fe42b4cd2974808a923bc8333
C1=NCCCN1.Cc1cc(F)cc(N)c1[N+](=O)[O-]>>Cc1cc(N2C=NCCC2)cc(N)c1[N+](=O)[O-]
FC=1C=C(C(=C(N)C1)[N+](=O)[O-])C.N1C=NCCC1.C([O-])([O-])=O.[K+].[K+]>>N1(C=NCCC1)C=1C=C(C(=C(N)C1)[N+](=O)[O-])C
[NH:5]1[CH:6]=[N:7][CH2:8][CH2:9][CH2:10]1.F[c:4]1[cH:3][c:2]([CH3:1])[c:14]([N+:15](=[O:16])[O-:17])[c:12]([NH2:13])[cH:11]1>>[CH3:1][c:2]1[cH:3][c:4]([N:5]2[CH:6]=[N:7][CH2:8][CH2:9][CH2:10]2)[cH:11][c:12]([NH2:13])[c:14]1[N+:15](=[O:16])[O-:17]
C1=NCCCN1.Cc1cc(F)cc(N)c1[N+](=O)[O-]
Cc1cc(N2C=NCCC2)cc(N)c1[N+](=O)[O-]
null
null
O.CS(=O)C
Heteroatom Alkylation and Arylation
Buchwald-Hartwig/Ullmann-Goldberg/N-arylation secondary amine
8058200d0361ca02ecc2569507c9154b237ced21167142f7233da50f542344bf
b6b8e2cdb45054a35f5e8157d624f852c0601a09401556706e166b19536eb7a7
C1=NCCCN1c1ccccc1
F-[c;H0;D3;+0:1](:[c:2]:[c:3]):[c:4]:[c:5].[#7:6]1=[C:7]-[NH;D2;+0:8]-[C:9]-[C:10]-[C:11]-1>>[c:3]:[c:2]:[c;H0;D3;+0:1](-[N;H0;D3;+0:8]1-[C:9]-[C:10]-[C:11]-[#7:6]=[C:7]-1):[c:4]:[c:5]
67.2
[{"value": 67.0, "product": "N1(C=NCCC1)C=1C=C(C(=C(N)C1)[N+](=O)[O-])C", "details": "PERCENTYIELD", "is_desired": false}, {"value": 67.2, "product": "N1(C=NCCC1)C=1C=C(C(=C(N)C1)[N+](=O)[O-])C", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
100
CELSIUS
null
null
To a stirred solution of 2.0 g (11.76 mmol) of the 5-Flouro-3-methyl-2-nitro aniline in 10 mL of DMSO was added 1.2 g (14.11 mmol) of 1,4,5,6-Tetrahydropyrimidine, and 2.43 g (17.64 mmol) of potassium carbonate, and the mixture was heated at 100° C. for 10 hrs, cooled, diluted with water, and extracted with Ethylacetat...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Secondary amine
Tertiary amine
C1=NCCCN1.c1ccccc1
c1ccccc1.C1=NCCC[NH]1
c1ccccc1.C1=NCCC[NH]1
HF
O.CS(=O)C
100
null
C1=NCCCN1.Cc1cc(F)cc(N)c1[N+](=O)[O-]>O.CS(=O)C>Cc1cc(N2C=NCCC2)cc(N)c1[N+](=O)[O-]
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-c7e6494fa8f7460c91b889ba606e119f
CCOC(=O)CNC(=O)Cc1nc2c(C)cc(N3CCOCC3)cc2n1C(=O)OC(C)(C)C>>Cc1cc(N2CCOCC2)cc2c1nc(C1=C(O)CNC1=O)n2C(=O)OC(C)(C)C
[Cl-].[NH4+].[H-].[Na+].C(C)OC(CNC(CC1=NC2=C(N1C(=O)OC(C)(C)C)C=C(C=C2C)N2CCOCC2)=O)=O.C(C)(=O)OCC>>OC1=C(C(NC1)=O)C1=NC2=C(N1C(=O)OC(C)(C)C)C=C(C=C2C)N2CCOCC2
CCO[C:17](=[O:18])[CH2:19][NH:20][C:21]([CH2:16][c:15]1[n:14][c:13]2[c:2]([CH3:1])[cH:3][c:4]([N:5]3[CH2:6][CH2:7][O:8][CH2:9][CH2:10]3)[cH:11][c:12]2[n:23]1[C:24](=[O:25])[O:26][C:27]([CH3:28])([CH3:29])[CH3:30])=[O:22]>>[CH3:1][c:2]1[cH:3][c:4]([N:5]2[CH2:6][CH2:7][O:8][CH2:9][CH2:10]2)[cH:11][c:12]2[c:13]1[n:14][c:1...
CCOC(=O)CNC(=O)Cc1nc2c(C)cc(N3CCOCC3)cc2n1C(=O)OC(C)(C)C
Cc1cc(N2CCOCC2)cc2c1nc(C1=C(O)CNC1=O)n2C(=O)OC(C)(C)C
null
null
O1CCCC1.C1(=CC=CC=C1)C
Functional Group Interconversion
OtherReaction
2a6ece8886ad883f7558adcc6d9b0042824d924f877e287882f270a1578f5b9a
0659373f3fa6d9cff47a4c1440102215d90e61b9fd30b7cb63f622f6bc940def
O=C1NCC=C1c1nc2ccc(N3CCOCC3)cc2[nH]1
C-C-O-[C;H0;D3;+0:1](=[O;H0;D1;+0:2])-[C:3]-[#7:4]-[C:5](=[O;D1;H0:6])-[CH2;D2;+0:7]-[c:8]1:[#7;a:9]:[c:10]:[c:11]:[#7;a:12]:1-[C:13](-[#8:14])=[O;D1;H0:15]>>[#8:14]-[C:13](=[O;D1;H0:15])-[#7;a:12]1:[c:11]:[c:10]:[#7;a:9]:[c:8]:1-[C;H0;D3;+0:7]1=[C;H0;D3;+0:1](-[OH;D1;+0:2])-[C:3]-[#7:4]-[C:5]-1=[O;D1;H0:6]
59.3
[{"value": 59.0, "product": "OC1=C(C(NC1)=O)C1=NC2=C(N1C(=O)OC(C)(C)C)C=C(C=C2C)N2CCOCC2", "details": "PERCENTYIELD", "is_desired": false}, {"value": 59.3, "product": "OC1=C(C(NC1)=O)C1=NC2=C(N1C(=O)OC(C)(C)C)C=C(C=C2C)N2CCOCC2", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
0
CELSIUS
2.5
HOUR
To a stirred suspension of sodium hydride (60% in oil, 0.014 g, 0.352 mmol) in toluene (5 mL) was added [2-(1-tert-butyloxycarbonyl-4-methyl-6-morpholin-4-yl-1H-benzoimidazol-2-yl)-acetylamino]-acetic acid ethyl ester (0.135 g, 0.293 mmol) in tetrahydrofuran (5 mL) over 5 minutes. The mixture was stirred at 90–100° C. ...
10.6084/m9.figshare.5104873.v1
null
Ester
Enol
null
C1=CCNC1
C1COCC[NH]1.c1ccc2[nH]cnc2c1.C1=CCNC1
HO-
O1CCCC1.C1(=CC=CC=C1)C
0
2.5
CCOC(=O)CNC(=O)Cc1nc2c(C)cc(N3CCOCC3)cc2n1C(=O)OC(C)(C)C>O1CCCC1.C1(=CC=CC=C1)C>Cc1cc(N2CCOCC2)cc2c1nc(C1=C(O)CNC1=O)n2C(=O)OC(C)(C)C
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-fdb229fb52504c7c865515f1f76e0f50
CCOC(=O)CNC(=O)Cc1nc2c(C)cc(N3CCOCC3)cc2n1C(=O)OC(C)(C)C>>Cc1cc(N2CCOCC2)cc2[nH]c(C3=C(O)CNC3=O)nc12
Cl.[H-].[Na+].C(C)OC(CNC(CC1=NC2=C(N1C(=O)OC(C)(C)C)C=C(C=C2C)N2CCOCC2)=O)=O.C(C)(=O)OCC>>OC1=C(C(NC1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCOCC2
CCO[C:16](=[O:17])[CH2:18][NH:19][C:20]([CH2:15][c:14]1[n:13](C(=O)OC(C)(C)C)[c:12]2[cH:11][c:4]([N:5]3[CH2:6][CH2:7][O:8][CH2:9][CH2:10]3)[cH:3][c:2]([CH3:1])[c:23]2[n:22]1)=[O:21]>>[CH3:1][c:2]1[cH:3][c:4]([N:5]2[CH2:6][CH2:7][O:8][CH2:9][CH2:10]2)[cH:11][c:12]2[nH:13][c:14]([C:15]3=[C:16]([OH:17])[CH2:18][NH:19][C:2...
CCOC(=O)CNC(=O)Cc1nc2c(C)cc(N3CCOCC3)cc2n1C(=O)OC(C)(C)C
Cc1cc(N2CCOCC2)cc2[nH]c(C3=C(O)CNC3=O)nc12
null
null
O1CCCC1.C1(=CC=CC=C1)C
Functional Group Interconversion
OtherReaction
8db06172dbb34aa0e1e2ef5fa4b1974ae30ad05d61dcbdc6732e881989252889
fa217a357031eb0909b8083e1a82e4044635db92e294ecf44cb04195dc70c434
O=C1NCC=C1c1nc2ccc(N3CCOCC3)cc2[nH]1
C-C-O-[C;H0;D3;+0:1](=[O;H0;D1;+0:2])-[C:3]-[#7:4]-[C:5](=[O;D1;H0:6])-[CH2;D2;+0:7]-[c:8]1:[#7;a:9]:[c:10](:[c:11]):[c:12](:[c:13]):[n;H0;D3;+0:14]:1-C(=O)-O-C(-C)(-C)-C>>[O;D1;H0:6]=[C:5]1-[#7:4]-[C:3]-[C;H0;D3;+0:1](-[OH;D1;+0:2])=[C;H0;D3;+0:7]-1-[c:8]1:[#7;a:9]:[c:10](:[c:11]):[c:12](:[c:13]):[nH;D2;+0:14]:1
69
[{"value": 69.0, "product": "OC1=C(C(NC1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCOCC2", "details": "PERCENTYIELD", "is_desired": false}, {"value": 8.7, "product": "OC1=C(C(NC1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCOCC2", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
0
CELSIUS
5
HOUR
To a stirred suspension of sodium hydride (60% in oil, 0.003 g, 0.044 mmol) in toluene (1 mL) was added [2-(1-tert-butyloxycarbonyl-4-methyl-6-morpholin-4-yl-1H-benzoimidazol-2-yl)-acetylamino]-acetic acid ethyl ester (0.135 g, 0.293 mmol) in tetrahydrofuran (2 mL) over 5 minutes. The mixture was stirred at 90–100° C. ...
10.6084/m9.figshare.5104873.v1
null
Ester.Ether.Boc
Enol
c1ccc2nc[nH]c2c1
c1ccc2[nH]cnc2c1.C1=CCNC1
C1COCC[NH]1.c1ccc2[nH]cnc2c1.C1=CCNC1
HO-
O1CCCC1.C1(=CC=CC=C1)C
0
5
CCOC(=O)CNC(=O)Cc1nc2c(C)cc(N3CCOCC3)cc2n1C(=O)OC(C)(C)C>O1CCCC1.C1(=CC=CC=C1)C>Cc1cc(N2CCOCC2)cc2[nH]c(C3=C(O)CNC3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-4f8344c2ce4648658b0b21935e1e0164
Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(I)cc[nH]c3=O)nc12.N[C@H](CO)c1ccccc1>>Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(N[C@H](CO)c4ccccc4)cc[nH]c3=O)nc12
N1(C=NC=C1)C=1C=C(C2=C(NC(=N2)C=2C(NC=CC2I)=O)C1)C.C1(=CC=CC=C1)[C@H](N)CO.CN1CCOCC1>>OC[C@H](C1=CC=CC=C1)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2C=NC=C2
I[c:15]1[c:14](-[c:13]2[nH:12][c:11]3[cH:10][c:4](-[n:5]4[cH:6][cH:7][n:8][cH:9]4)[cH:3][c:2]([CH3:1])[c:32]3[n:31]2)[c:29](=[O:30])[nH:28][cH:27][cH:26]1.[NH2:16][C@H:17]([CH2:18][OH:19])[c:20]1[cH:21][cH:22][cH:23][cH:24][cH:25]1>>[CH3:1][c:2]1[cH:3][c:4](-[n:5]2[cH:6][cH:7][n:8][cH:9]2)[cH:10][c:11]2[nH:12][c:13](-[...
Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(I)cc[nH]c3=O)nc12.N[C@H](CO)c1ccccc1
Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(N[C@H](CO)c4ccccc4)cc[nH]c3=O)nc12
null
null
CN(C)C=O
Heteroatom Alkylation and Arylation
N-arylation (Buchwald-Hartwig/Ullmann-Goldberg)
e72e852090cf7435e97b85905772f4450e91af32c902e1e774d793ceb6479b9b
71a04ae650defc5edd86a92f43c304e981a05f07ff76248da8d4155f3905a29d
O=c1[nH]ccc(NCc2ccccc2)c1-c1nc2ccc(-n3ccnc3)cc2[nH]1
I-[c;H0;D3;+0:1]1:[c:2]:[c:3]:[#7;a:4]:[c:5](=[O;D1;H0:6]):[c:7]:1-[c:8](:[#7;a:9]):[#7;a:10].[C:11]-[C:12](-[NH2;D1;+0:13])-[c:14]>>[#7;a:9]:[c:8](-[c:7]1:[c:5](=[O;D1;H0:6]):[#7;a:4]:[c:3]:[c:2]:[c;H0;D3;+0:1]:1-[NH;D2;+0:13]-[C:12](-[C:11])-[c:14]):[#7;a:10]
52.1
[{"value": 52.0, "product": "OC[C@H](C1=CC=CC=C1)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2C=NC=C2", "details": "PERCENTYIELD", "is_desired": false}, {"value": 52.1, "product": "OC[C@H](C1=CC=CC=C1)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2C=NC=C2", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
80
CELSIUS
null
null
To a solution of 3-(6-imidazol-1-yl-4-methyl-1H-benzimidazol-2-yl)-4-iodo-1H-pyridin-2-one (30 mg, 0.072 mmol) in DMF (1 mL) were added (S)-(−)-2-phenylglycinol (26 mg, 0.18 mmol) and N-methylmorpholine (0.1 mL). The reaction mixture was heated to 80° C. for 6 h and cooled to room temperature. The solvent was removed u...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Primary amine
Secondary amine
c1cccnc1
c1cccnc1
c1c[nH]cn1.c1ccc2[nH]cnc2c1.c1ccccc1.c1cccnc1
HI
CN(C)C=O
80
null
Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(I)cc[nH]c3=O)nc12.N[C@H](CO)c1ccccc1>CN(C)C=O>Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(N[C@H](CO)c4ccccc4)cc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-6f8cf0098830427dbd7603dfff6765ca
CO.Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(I)cc[nH]c3=O)nc12.c1ccncc1>>Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(OCc4ccccn4)cc[nH]c3=O)nc12
N1(C=NC=C1)C=1C=C(C2=C(NC(=N2)C=2C(NC=CC2I)=O)C1)C.CO.N1=CC=CC=C1.[F-].[Cs+]>>N1(C=NC=C1)C=1C=C(C2=C(NC(=N2)C=2C(NC=CC2OCC2=NC=CC=C2)=O)C1)C
[OH:16][CH3:17].I[c:15]1[c:14](-[c:13]2[nH:12][c:11]3[cH:10][c:4](-[n:5]4[cH:6][cH:7][n:8][cH:9]4)[cH:3][c:2]([CH3:1])[c:30]3[n:29]2)[c:27](=[O:28])[nH:26][cH:25][cH:24]1.[cH:18]1[cH:19][cH:21][cH:20][cH:22][n:23]1>>[CH3:1][c:2]1[cH:3][c:4](-[n:5]2[cH:6][cH:7][n:8][cH:9]2)[cH:10][c:11]2[nH:12][c:13](-[c:14]3[c:15]([O:1...
CO.Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(I)cc[nH]c3=O)nc12.c1ccncc1
Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(OCc4ccccn4)cc[nH]c3=O)nc12
null
null
CN(C)C=O
Heteroatom Alkylation and Arylation
OtherReaction
4bd4daeaae3d60d4e661cfa318109d3052f11b8772d8b92f15df5d6cd5788cf9
23dafde907f7a74dc1d4cc65967b00a9b318897fe61a3d3c4a9fddf320485f17
O=c1[nH]ccc(OCc2ccccn2)c1-c1nc2ccc(-n3ccnc3)cc2[nH]1
I-[c;H0;D3;+0:1]1:[c:2]:[c:3]:[#7;a:4]:[c:5](=[O;D1;H0:6]):[c:7]:1-[c:8](:[#7;a:9]):[#7;a:10].[#7;a:11]1:[cH;D2;+0:12]:[cH;D2;+0:13]:[cH;D2;+0:14]:[cH;D2;+0:15]:[cH;D2;+0:16]:1.[CH3;D1;+0:17]-[OH;D1;+0:18]>>[#7;a:9]:[c:8](-[c:7]1:[c:5](=[O;D1;H0:6]):[#7;a:4]:[c:3]:[c:2]:[c;H0;D3;+0:1]:1-[O;H0;D2;+0:18]-[CH2;D2;+0:17]-[...
34.3
[{"value": 34.0, "product": "N1(C=NC=C1)C=1C=C(C2=C(NC(=N2)C=2C(NC=CC2OCC2=NC=CC=C2)=O)C1)C", "details": "PERCENTYIELD", "is_desired": false}, {"value": 34.3, "product": "N1(C=NC=C1)C=1C=C(C2=C(NC(=N2)C=2C(NC=CC2OCC2=NC=CC=C2)=O)C1)C", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
130
CELSIUS
null
null
To a solution of 3-(6-imidazol-1-yl-4-methyl-1H-benzimidazol-2-yl)-4-iodo-1H-pyridin-2-one (25 mg, 0.06 mmol) in DMF (2 mL) were added pyridine carbinol (26 mg, 0.24 mmol) and cesium fluoride (36 mg, 0.24 mmol). The reaction mixture was heated to 130° C. for 14 h and cooled to room temperature. After concentration in v...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Methanol
Ether
c1cccnc1.c1ccncc1
c1ccncc1.c1cccnc1
c1c[nH]cn1.c1ccc2[nH]cnc2c1.c1ccncc1.c1cccnc1
HI
CN(C)C=O
130
null
CO.Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(I)cc[nH]c3=O)nc12.c1ccncc1>CN(C)C=O>Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(OCc4ccccn4)cc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-33537aaeca9247a58458ddeff6ad7439
Cc1cc(C#N)cc2[nH]c(-c3c(Cl)cc[nH]c3=O)nc12.N[C@H](CO)Cc1ccccc1>>Cc1cc(C#N)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
ClC1=C(C(NC=C1)=O)C=1NC2=C(N1)C(=CC(=C2)C#N)C.CN1CCOCC1.N[C@H](CO)CC1=CC=CC=C1>>OC[C@H](CC1=CC=CC=C1)NC1=C(C(NC=C1)=O)C=1NC2=C(N1)C(=CC(=C2)C#N)C
Cl[c:12]1[c:11](-[c:10]2[nH:9][c:8]3[cH:7][c:4]([C:5]#[N:6])[cH:3][c:2]([CH3:1])[c:30]3[n:29]2)[c:27](=[O:28])[nH:26][cH:25][cH:24]1.[NH2:13][C@H:14]([CH2:15][OH:16])[CH2:17][c:18]1[cH:19][cH:20][cH:21][cH:22][cH:23]1>>[CH3:1][c:2]1[cH:3][c:4]([C:5]#[N:6])[cH:7][c:8]2[nH:9][c:10](-[c:11]3[c:12]([NH:13][C@H:14]([CH2:15]...
Cc1cc(C#N)cc2[nH]c(-c3c(Cl)cc[nH]c3=O)nc12.N[C@H](CO)Cc1ccccc1
Cc1cc(C#N)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
null
null
CN(C)C=O
Heteroatom Alkylation and Arylation
N-arylation (Buchwald-Hartwig/Ullmann-Goldberg)
e72e852090cf7435e97b85905772f4450e91af32c902e1e774d793ceb6479b9b
71a04ae650defc5edd86a92f43c304e981a05f07ff76248da8d4155f3905a29d
O=c1[nH]ccc(NCCc2ccccc2)c1-c1nc2ccccc2[nH]1
Cl-[c;H0;D3;+0:1]1:[c:2]:[c:3]:[#7;a:4]:[c:5](=[O;D1;H0:6]):[c:7]:1-[c:8](:[#7;a:9]):[#7;a:10].[C:11]-[C:12](-[C:13])-[NH2;D1;+0:14]>>[#7;a:9]:[c:8](-[c:7]1:[c:5](=[O;D1;H0:6]):[#7;a:4]:[c:3]:[c:2]:[c;H0;D3;+0:1]:1-[NH;D2;+0:14]-[C:12](-[C:11])-[C:13]):[#7;a:10]
68
[{"value": 68.0, "product": "OC[C@H](CC1=CC=CC=C1)NC1=C(C(NC=C1)=O)C=1NC2=C(N1)C(=CC(=C2)C#N)C", "details": "PERCENTYIELD", "is_desired": false}, {"value": 67.4, "product": "OC[C@H](CC1=CC=CC=C1)NC1=C(C(NC=C1)=O)C=1NC2=C(N1)C(=CC(=C2)C#N)C", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
80
CELSIUS
null
null
To a solution of 2-(4-chloro-2-oxo-1,2-dihydro-pyridin-3-yl)-7-methyl-3H-benzimidazole-5-carbonitrile (0.7 g, 2.19 mmol) in DMF (15 mL) were added N-methylmorpholine (0.66 g, 6.57 mmol) and (S)-(−)-2-amino-3-phenyl-1-propanol (0.40 g, 2.63 mmol). The reaction mixture was heated to 80° C. for 6 h and then cooled to room...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Primary amine
Secondary amine
c1cccnc1
c1cccnc1
c1ccc2[nH]cnc2c1.c1ccccc1.c1cccnc1
HCl
CN(C)C=O
80
null
Cc1cc(C#N)cc2[nH]c(-c3c(Cl)cc[nH]c3=O)nc12.N[C@H](CO)Cc1ccccc1>CN(C)C=O>Cc1cc(C#N)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-edc45fb5b48a4647b0c6da69f1550dcb
CO.Cc1cc(N2CCNCC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12>>Cc1cc(N2CCN(C(=O)c3ccccc3)CC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
OC[C@H](CC1=CC=CC=C1)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCNCC2.CO>>OC[C@H](CC1=CC=CC=C1)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCN(CC2)C(=O)C2=CC=CC=C2
[CH3:9][OH:10].[CH3:1][c:2]1[cH:3][c:4]([N:5]2[CH2:6][CH2:7][NH:8][CH2:17][CH2:18]2)[cH:19][c:20]2[nH:21][c:22](-[c:23]3[c:24]([NH:25][C@H:26]([CH2:27][OH:28])[CH2:29][c:30]4[cH:11][cH:15][cH:14][cH:13][cH:12]4)[cH:36][cH:37][nH:38][c:39]3=[O:40])[n:41][c:42]12>>[CH3:1][c:2]1[cH:3][c:4]([N:5]2[CH2:6][CH2:7][N:8]([C:9](...
CO.Cc1cc(N2CCNCC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
Cc1cc(N2CCN(C(=O)c3ccccc3)CC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
null
C(C1=CC=CC=C1)(=O)Cl
null
Aromatic Heterocycle Formation
OtherReaction
3d14998485e7ab3bf7be7d1955355ae5d042e5f0ef1052734609e4c495073893
8d86c688d267df2efa5d22f910acf32ce98e069bb28f67fb21d39c7d03924239
O=C(c1ccccc1)N1CCN(c2ccc3nc(-c4c(NCCc5ccccc5)cc[nH]c4=O)[nH]c3c2)CC1
[#7:1]1-[C:2]-[C:3]-[NH;D2;+0:4]-[C:5]-[C:6]-1.[C:7]-[C:8]-[c;H0;D3;+0:9]1:[cH;D2;+0:10]:[cH;D2;+0:11]:[c:12]:[c:13]:[cH;D2;+0:14]:1.[CH3;D1;+0:15]-[OH;D1;+0:16]>>[C:7]-[C:8]-[c;H0;D3;+0:9](:[c:17]:[c:18]):[c:19]:[c:20].[O;H0;D1;+0:16]=[C;H0;D3;+0:15](-[N;H0;D3;+0:4]1-[C:3]-[C:2]-[#7:1]-[C:6]-[C:5]-1)-[c;H0;D3;+0:10]1:...
33
[{"value": 33.0, "product": "OC[C@H](CC1=CC=CC=C1)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCN(CC2)C(=O)C2=CC=CC=C2", "details": "PERCENTYIELD", "is_desired": false}]
null
null
5
MINUTE
To a solution of (S)-4-(1-hydroxymethyl-2-phenyl-ethylamino)-3-(4-methyl-6-piperazin-1-yl-1H-benzimidazol-2-yl)-1H-pyridin-2-one (30 mg, 0.063 mmol) in methanol (2 mL) was added benzoyl chloride (1 drop). The reaction mixture was stirred for 5 min. and concentrated. The residue was purified by prep. HPLC to yield the t...
10.6084/m9.figshare.5104873.v1
null
Secondary amine.Methanol
Tertiary amide
C1C[NH]CCN1.c1ccccc1
C1C[NH]CC[NH]1.c1ccccc1.c1ccccc1
C1C[NH]CC[NH]1.c1ccccc1.c1ccc2[nH]cnc2c1.c1ccccc1.c1cccnc1
Other
C(C1=CC=CC=C1)(=O)Cl
null
0.083333
CO.Cc1cc(N2CCNCC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12>C(C1=CC=CC=C1)(=O)Cl>Cc1cc(N2CCN(C(=O)c3ccccc3)CC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-a1499889cbbf4dbcb9bcba9dc3b39e9f
CC(C)=O.Cc1cc(N2CCNCC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12>>Cc1cc(N2CCN(C(C)C)CC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
OC[C@H](CC1=CC=CC=C1)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCNCC2.CC(=O)C.C1CCOC1.[BH3-]C#N.[Na+]>>OC[C@H](CC1=CC=CC=C1)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCN(CC2)C(C)C
O=[C:9]([CH3:10])[CH3:11].[CH3:1][c:2]1[cH:3][c:4]([N:5]2[CH2:6][CH2:7][NH:8][CH2:12][CH2:13]2)[cH:14][c:15]2[nH:16][c:17](-[c:18]3[c:19]([NH:20][C@H:21]([CH2:22][OH:23])[CH2:24][c:25]4[cH:26][cH:27][cH:28][cH:29][cH:30]4)[cH:31][cH:32][nH:33][c:34]3=[O:35])[n:36][c:37]12>>[CH3:1][c:2]1[cH:3][c:4]([N:5]2[CH2:6][CH2:7][...
CC(C)=O.Cc1cc(N2CCNCC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
Cc1cc(N2CCN(C(C)C)CC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
null
null
CO
Heteroatom Alkylation and Arylation
reductive amination
854fe88b501608b5d4145f9e8c3d87d2513f8a01d07d6ef74b399fc089a3703b
99acf13bfcfe579f51ccb82c65e4ca039ee7ca9b6fcd2747a3d9a292a88e564e
O=c1[nH]ccc(NCCc2ccccc2)c1-c1nc2ccc(N3CCNCC3)cc2[nH]1
O=[C;H0;D3;+0:1](-[C;D1;H3:2])-[C;D1;H3:3].[#7:4]1-[C:5]-[C:6]-[NH;D2;+0:7]-[C:8]-[C:9]-1>>[C;D1;H3:2]-[CH;D3;+0:1](-[C;D1;H3:3])-[N;H0;D3;+0:7]1-[C:6]-[C:5]-[#7:4]-[C:9]-[C:8]-1
44
[{"value": 44.0, "product": "OC[C@H](CC1=CC=CC=C1)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCN(CC2)C(C)C", "details": "PERCENTYIELD", "is_desired": false}]
null
null
1
HOUR
To a solution of (S)-4-(1-hydroxymethyl-2-phenyl-ethylamino)-3-(4-methyl-6-piperazin-1-yl-1H-benzimidazol-2-yl)-1H-pyridin-2-one (25 mg, 0.054 mmol) in methanol (0.5 mL) was added acetone (0.25 mL) and 1 M THF solution of NaCNBH3 (0.2 mL). The reaction mixture was stirred at room temperature for 1 h and concentrated in...
10.6084/m9.figshare.5104873.v1
null
Ketone.Secondary amine
Tertiary amine
C1C[NH]CCN1
C1C[NH]CC[NH]1
C1C[NH]CC[NH]1.c1ccc2[nH]cnc2c1.c1ccccc1.c1cccnc1
Other
CO
null
1
CC(C)=O.Cc1cc(N2CCNCC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12>CO>Cc1cc(N2CCN(C(C)C)CC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-562fc9192226499b93ae0748e29277b4
Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(Cl)ncnc3Cl)nc12.N[C@H](CO)Cc1ccccc1>>Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(Cl)ncnc3N[C@H](CO)Cc3ccccc3)nc12
ClC1=NC=NC(=C1C1=NC2=C(N1)C=C(C=C2C)N2C=NC=C2)Cl.N[C@H](CO)CC1=CC=CC=C1.C(C)N(CC)CC>>ClC1=C(C(=NC=N1)N[C@H](CO)CC1=CC=CC=C1)C1=NC2=C(N1)C=C(C=C2C)N2C=NC=C2
Cl[c:20]1[c:14](-[c:13]2[nH:12][c:11]3[cH:10][c:4](-[n:5]4[cH:6][cH:7][n:8][cH:9]4)[cH:3][c:2]([CH3:1])[c:33]3[n:32]2)[c:15]([Cl:16])[n:17][cH:18][n:19]1.[NH2:21][C@H:22]([CH2:23][OH:24])[CH2:25][c:26]1[cH:27][cH:28][cH:29][cH:30][cH:31]1>>[CH3:1][c:2]1[cH:3][c:4](-[n:5]2[cH:6][cH:7][n:8][cH:9]2)[cH:10][c:11]2[nH:12][c...
Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(Cl)ncnc3Cl)nc12.N[C@H](CO)Cc1ccccc1
Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(Cl)ncnc3N[C@H](CO)Cc3ccccc3)nc12
null
null
C(C)(C)O
Heteroatom Alkylation and Arylation
N-arylation (Buchwald-Hartwig/Ullmann-Goldberg)
c38b7155556ff28144ae37859ff6668b20d59da60c705d26b158542b6d8385da
71a04ae650defc5edd86a92f43c304e981a05f07ff76248da8d4155f3905a29d
c1ccc(CCNc2ncncc2-c2nc3ccc(-n4ccnc4)cc3[nH]2)cc1
Cl-[c;H0;D3;+0:1]1:[#7;a:2]:[c:3]:[#7;a:4]:[c:5](-[Cl;D1;H0:6]):[c:7]:1-[c:8](:[#7;a:9]):[#7;a:10].[C:11]-[C:12](-[C:13])-[NH2;D1;+0:14]>>[#7;a:9]:[c:8](-[c:7]1:[c:5](-[Cl;D1;H0:6]):[#7;a:4]:[c:3]:[#7;a:2]:[c;H0;D3;+0:1]:1-[NH;D2;+0:14]-[C:12](-[C:11])-[C:13]):[#7;a:10]
null
[]
80
CELSIUS
null
null
To a solution of 2-(4,6-dichloro-pyrimidin-5-yl)-6-imidazol-1-yl-4-methyl-1H-benzimidazole (40 mg, 0.16 mmol) in isopropanol (5 mL) was added (S)-(−)-2-amino-3-phenyl-propanol (35 mg, 0.23 mmol) and triethylamine (0.5 mL). The reaction mixture was heated to 80° C. for 4 h, cooled to room temperature and concentrated wi...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Primary amine
Secondary amine
c1cncnc1
c1cncnc1
c1c[nH]cn1.c1ccc2[nH]cnc2c1.c1cncnc1.c1ccccc1
HCl
C(C)(C)O
80
null
Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(Cl)ncnc3Cl)nc12.N[C@H](CO)Cc1ccccc1>C(C)(C)O>Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(Cl)ncnc3N[C@H](CO)Cc3ccccc3)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-cc542426718546258840318a9ecddafe
CC(=O)O.Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(Cl)ncnc3N[C@H](CO)Cc3ccccc3)nc12>>Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)nc[nH]c3=O)nc12
ClC1=C(C(=NC=N1)N[C@H](CO)CC1=CC=CC=C1)C1=NC2=C(N1)C=C(C=C2C)N2C=NC=C2.C(C)(=O)O.N>>OC[C@H](CC1=CC=CC=C1)NC1=C(C(NC=N1)=O)C1=NC2=C(N1)C=C(C=C2C)N2C=NC=C2
CC(O)=[O:31].Cl[c:30]1[c:14](-[c:13]2[nH:12][c:11]3[cH:10][c:4](-[n:5]4[cH:6][cH:7][n:8][cH:9]4)[cH:3][c:2]([CH3:1])[c:33]3[n:32]2)[c:15]([NH:16][C@H:17]([CH2:18][OH:19])[CH2:20][c:21]2[cH:22][cH:23][cH:24][cH:25][cH:26]2)[n:27][cH:28][n:29]1>>[CH3:1][c:2]1[cH:3][c:4](-[n:5]2[cH:6][cH:7][n:8][cH:9]2)[cH:10][c:11]2[nH:1...
CC(=O)O.Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(Cl)ncnc3N[C@H](CO)Cc3ccccc3)nc12
Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)nc[nH]c3=O)nc12
null
O
Cl.CO
Miscellaneous
OtherReaction
427b6563884bf6ecad006f18b561981182d366777c7ccaba473cc0c61768fa05
3fbb180061815c1a91daf750f59d95354663c01e4c6076719644d5369bdccd52
O=c1[nH]cnc(NCCc2ccccc2)c1-c1nc2ccc(-n3ccnc3)cc2[nH]1
C-C(-O)=[O;H0;D1;+0:1].Cl-[c;H0;D3;+0:2]1:[n;H0;D2;+0:3]:[c:4]:[#7;a:5]:[c:6](-[#7:7]):[c:8]:1-[c:9](:[#7;a:10]):[#7;a:11]>>[#7:7]-[c:6]1:[#7;a:5]:[c:4]:[nH;D2;+0:3]:[c;H0;D3;+0:2](=[O;H0;D1;+0:1]):[c:8]:1-[c:9](:[#7;a:10]):[#7;a:11]
37
[{"value": 37.0, "product": "OC[C@H](CC1=CC=CC=C1)NC1=C(C(NC=N1)=O)C1=NC2=C(N1)C=C(C=C2C)N2C=NC=C2", "details": "PERCENTYIELD", "is_desired": false}]
100
CELSIUS
null
null
To a solution of (S)-2-[6-chloro-5-(6-imidazol-1-yl-4-methyl-1H-benzimidazol-2-yl)-pyrimidin-4-ylamino]-3-phenyl-propan-1-ol in 4 N HCl (0.5 mL) and acetic acid (0.5 mL) was added two drops of water. The reaction mixture was heated to 100° C. for 8 h, cooled to room temperature, and neutralized with ammonia in methanol...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Carboxylic acid
null
c1cncnc1
c1cncnc1
c1c[nH]cn1.c1ccc2[nH]cnc2c1.c1ccccc1.c1cncnc1
HCl
O.Cl.CO
100
null
CC(=O)O.Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(Cl)ncnc3N[C@H](CO)Cc3ccccc3)nc12>O.Cl.CO>Cc1cc(-n2ccnc2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)nc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-338637abc7114f259ff64c6c0c320f6e
CNC(=N)c1cc(C)c2nc(-c3c(NCC(OC)c4ccc(OC)c(Cl)c4)cc[nH]c3=O)[nH]c2c1>>CNC(=N)c1cc(C)c2nc(-c3c(NCC(O)c4ccc(OC)c(Cl)c4)cc[nH]c3=O)[nH]c2c1
ClC=1C=C(C=CC1OC)C(CNC1=C(C(NC=C1)=O)C=1NC2=C(N1)C(=CC(=C2)C(=N)NC)C)OC.[OH-].[Na+]>>ClC=1C=C(C=CC1OC)C(CNC1=C(C(NC=C1)=O)C=1NC2=C(N1)C(=CC(=C2)C(=N)NC)C)O
C[O:17][CH:16]([CH2:15][NH:14][c:13]1[c:12](-[c:11]2[n:10][c:9]3[c:7]([CH3:8])[cH:6][c:5]([C:3]([NH:2][CH3:1])=[NH:4])[cH:34][c:33]3[nH:32]2)[c:30](=[O:31])[nH:29][cH:28][cH:27]1)[c:18]1[cH:19][cH:20][c:21]([O:22][CH3:23])[c:24]([Cl:25])[cH:26]1>>[CH3:1][NH:2][C:3](=[NH:4])[c:5]1[cH:6][c:7]([CH3:8])[c:9]2[n:10][c:11](-...
CNC(=N)c1cc(C)c2nc(-c3c(NCC(OC)c4ccc(OC)c(Cl)c4)cc[nH]c3=O)[nH]c2c1
CNC(=N)c1cc(C)c2nc(-c3c(NCC(O)c4ccc(OC)c(Cl)c4)cc[nH]c3=O)[nH]c2c1
null
null
CO
Deprotection
Cleavage of methoxy ethers to alcohols
dcaefb482d0d4070854ae2f21edb78f004963f26f985f41a9781ad20aca44e4e
32e9a9ca3191eb6608eee26da72fef0d2c2afd087eefdbcc65ce4c46772064f8
O=c1[nH]ccc(NCCc2ccccc2)c1-c1nc2ccccc2[nH]1
C-[O;H0;D2;+0:1]-[C:2](-[C:3])-[c:4]>>[C:3]-[C:2](-[OH;D1;+0:1])-[c:4]
19
[{"value": 19.0, "product": "ClC=1C=C(C=CC1OC)C(CNC1=C(C(NC=C1)=O)C=1NC2=C(N1)C(=CC(=C2)C(=N)NC)C)O", "details": "PERCENTYIELD", "is_desired": false}, {"value": 18.7, "product": "ClC=1C=C(C=CC1OC)C(CNC1=C(C(NC=C1)=O)C=1NC2=C(N1)C(=CC(=C2)C(=N)NC)C)O", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
14
HOUR
To a solution of 2-{4-[2-(3-chloro-4-methoxy-phenyl)-2-methoxy-ethylamino]-2-oxo-1,2-dihydro-pyridin-3-yl}-7,N-dimethyl-3H-benzimidazole-5-carboxamidine (40 mg, 0.08 mmol) in methanol (5 mL) was added 2 N NaOH (0.5 mL) and the reaction mixture was stirred at room temperature for 14 h. After concentration in vacuo, the ...
10.6084/m9.figshare.5104873.v1
null
Ether
Secondary alcohol
null
null
c1ccc2[nH]cnc2c1.c1ccccc1.c1cccnc1
Other
CO
null
14
CNC(=N)c1cc(C)c2nc(-c3c(NCC(OC)c4ccc(OC)c(Cl)c4)cc[nH]c3=O)[nH]c2c1>CO>CNC(=N)c1cc(C)c2nc(-c3c(NCC(O)c4ccc(OC)c(Cl)c4)cc[nH]c3=O)[nH]c2c1
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-7e74e704a8844e3eaad4c028ece33304
Cc1cc(C(=O)N2CCN(C(=O)OC(C)(C)C)CC2)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12>>Cc1cc(C(=O)N2CCNCC2)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12
C(C)(C)(C)OC(=O)N1CCN(CC1)C(=O)C1=CC2=C(N=C(N2)C=2C(NC=CC2NCC(O)C2=CC(=CC=C2)Cl)=O)C(=C1)C.O1CCOCC1.Cl>>ClC=1C=C(C=CC1)C(CNC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)C(=O)N2CCNCC2)O
CC(C)(C)OC(=O)[N:10]1[CH2:9][CH2:8][N:7]([C:5]([c:4]2[cH:3][c:2]([CH3:1])[c:36]3[c:14]([cH:13]2)[nH:15][c:16](-[c:17]2[c:18]([NH:19][CH2:20][CH:21]([OH:22])[c:23]4[cH:24][cH:25][cH:26][c:27]([Cl:28])[cH:29]4)[cH:30][cH:31][nH:32][c:33]2=[O:34])[n:35]3)=[O:6])[CH2:12][CH2:11]1>>[CH3:1][c:2]1[cH:3][c:4]([C:5](=[O:6])[N:7...
Cc1cc(C(=O)N2CCN(C(=O)OC(C)(C)C)CC2)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12
Cc1cc(C(=O)N2CCNCC2)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12
null
null
CO
Reduction
Boc amine deprotection
2c25e19aee181a3c5131cfdfda27035fd54d4379a11d745dfb75d386bacfd500
a94b29c7264c852156fc1cdd4a0951a4fc26c06d0edc9e50c743825dbf79e3fd
O=C(c1ccc2nc(-c3c(NCCc4ccccc4)cc[nH]c3=O)[nH]c2c1)N1CCNCC1
C-C(-C)(-C)-O-C(=O)-[N;H0;D3;+0:1]1-[C:2]-[C:3]-[#7:4]-[C:5]-[C:6]-1>>[#7:4]1-[C:3]-[C:2]-[NH;D2;+0:1]-[C:6]-[C:5]-1
63
[{"value": 63.0, "product": "ClC=1C=C(C=CC1)C(CNC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)C(=O)N2CCNCC2)O", "details": "PERCENTYIELD", "is_desired": false}, {"value": 52.6, "product": "ClC=1C=C(C=CC1)C(CNC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)C(=O)N2CCNCC2)O", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
14
HOUR
To a solution of (±)-4-[1-(2-{4-[2-(3-chloro-phenyl)-2-hydroxy-ethylamino]-2-oxo-1,2-dihydro-pyridin-3-yl}-7-methyl-3H-benzimidazol-5-yl)-methanoyl]-piperazine-1-carboxylic acid tert-butyl ester (40 mg, 0.06 mmol) in methanol (5 mL) was added 4.0 M HCl dioxane solution (0.1 mL, excess). The reaction mixture was stirred...
10.6084/m9.figshare.5104873.v1
null
Carbamic ester.Ether.Boc
Secondary amine
C1C[NH]CC[NH]1
C1C[NH]CCN1
C1C[NH]CCN1.c1ccc2[nH]cnc2c1.c1ccccc1.c1cccnc1
HO-
CO
null
14
Cc1cc(C(=O)N2CCN(C(=O)OC(C)(C)C)CC2)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12>CO>Cc1cc(C(=O)N2CCNCC2)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-206e81d9f3434b4fa34c3bb75a51c123
Cc1cc(C#N)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12.NCCS>>Cc1cc(C2=NCCS2)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12
ClC=1C=C(C=CC1)C(CNC1=C(C(NC=C1)=O)C=1NC2=C(N1)C(=CC(=C2)C#N)C)O.Cl.NCCS.C(C)N(CC)CC>>ClC=1C=C(C=CC1)C(CNC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)C=2SCCN2)O
N#[C:5][c:4]1[cH:3][c:2]([CH3:1])[c:33]2[c:11]([cH:10]1)[nH:12][c:13](-[c:14]1[c:15]([NH:16][CH2:17][CH:18]([OH:19])[c:20]3[cH:21][cH:22][cH:23][c:24]([Cl:25])[cH:26]3)[cH:27][cH:28][nH:29][c:30]1=[O:31])[n:32]2.[NH2:6][CH2:7][CH2:8][SH:9]>>[CH3:1][c:2]1[cH:3][c:4]([C:5]2=[N:6][CH2:7][CH2:8][S:9]2)[cH:10][c:11]2[nH:12]...
Cc1cc(C#N)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12.NCCS
Cc1cc(C2=NCCS2)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12
null
null
CO
Heteroatom Alkylation and Arylation
OtherReaction
8bfbb26c81f477c00edcdc859f846785b4e9291c5091b005d109f7dc24702a58
3c08085a6d1a63d4de2eb84f83da9f89152a7592be88f0cad516baac8a24ffab
O=c1[nH]ccc(NCCc2ccccc2)c1-c1nc2ccc(C3=NCCS3)cc2[nH]1
N#[C;H0;D2;+0:1]-[c:2](:[c:3]):[c:4]:[c:5]:[#7;a:6].[NH2;D1;+0:7]-[C:8]-[C:9]-[SH;D1;+0:10]>>[#7;a:6]:[c:5]:[c:4]:[c:2](-[C;H0;D3;+0:1]1=[N;H0;D2;+0:7]-[C:8]-[C:9]-[S;H0;D2;+0:10]-1):[c:3]
66
[{"value": 66.0, "product": "ClC=1C=C(C=CC1)C(CNC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)C=2SCCN2)O", "details": "PERCENTYIELD", "is_desired": false}, {"value": 66.0, "product": "ClC=1C=C(C=CC1)C(CNC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)C=2SCCN2)O", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
null
null
To a solution of (±)-2-{4-[2-(3-chloro-phenyl)-2-hydroxy-ethylamino]-2-oxo-1,2-dihydro-pyridin-3-yl}-7-methyl-3H-benzimidazole-5-carbonitrile (100 mg, 0.24 mmol) in methanol (20 mL) was added 2-aminoethanethiol hydrochloride (41 mg, 0.36 mmol) and triethylamine (0.1 mL, excess). The reaction mixture was heated to reflu...
10.6084/m9.figshare.5104873.v1
null
Nitrile.Primary amine.Aliphatic thiol
Monosulfide
null
C1=NCCS1
C1=NCCS1.c1ccc2[nH]cnc2c1.c1ccccc1.c1cccnc1
Other
CO
null
null
Cc1cc(C#N)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12.NCCS>CO>Cc1cc(C2=NCCS2)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-d307fd90bd6d49408d0461f8c4eec9d0
Cc1cc(C#N)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12.O>>Cc1cc(C=O)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12
O.C(C(C)C)[Al]CC(C)C.ClC=1C=C(C=CC1)C(CNC1=C(C(NC=C1)=O)C=1NC2=C(N1)C(=CC(=C2)C#N)C)O.C(C)(=O)OCC>>ClC=1C=C(C=CC1)C(CNC1=C(C(NC=C1)=O)C=1NC2=C(N1)C(=CC(=C2)C=O)C)O
N#[C:5][c:4]1[cH:3][c:2]([CH3:1])[c:30]2[c:8]([cH:7]1)[nH:9][c:10](-[c:11]1[c:12]([NH:13][CH2:14][CH:15]([OH:16])[c:17]3[cH:18][cH:19][cH:20][c:21]([Cl:22])[cH:23]3)[cH:24][cH:25][nH:26][c:27]1=[O:28])[n:29]2.[OH2:6]>>[CH3:1][c:2]1[cH:3][c:4]([CH:5]=[O:6])[cH:7][c:8]2[nH:9][c:10](-[c:11]3[c:12]([NH:13][CH2:14][CH:15]([...
Cc1cc(C#N)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12.O
Cc1cc(C=O)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12
null
null
C1(=CC=CC=C1)C
Heteroatom Alkylation and Arylation
OtherReaction
26082e4725cd2a7c1eb6362fc44981286c2087c015aba2f1b570103659ffb41e
e783d65987caa6ceae095ff666413e4c8d25ead96c003eb4f99d66fc68c0b0bb
O=c1[nH]ccc(NCCc2ccccc2)c1-c1nc2ccccc2[nH]1
N#[C;H0;D2;+0:1]-[c:2](:[c:3]):[c:4]:[c:5]:[#7;a:6].[OH2;D0;+0:7]>>[#7;a:6]:[c:5]:[c:4]:[c:2](-[CH;D2;+0:1]=[O;H0;D1;+0:7]):[c:3]
2.5
[{"value": 2.5, "product": "ClC=1C=C(C=CC1)C(CNC1=C(C(NC=C1)=O)C=1NC2=C(N1)C(=CC(=C2)C=O)C)O", "details": "PERCENTYIELD", "is_desired": false}]
null
null
6
HOUR
To a suspension of (±)-2-{4-[2-(3-chloro-phenyl)-2-hydroxy-ethylamino]-2-oxo-1,2-dihydro-pyridin-3-yl }-7-methyl-3H-benzimidazole-5-carbonitrile (76 mg, 0.18 mmol) in toluene (anhydrous, 20 mL) was added diisobutylaluminium (1.4 M toluene solution) (0.65 mL, 0.97 mmol) at −78° C. under nitrogen. The mixture was stirred...
10.6084/m9.figshare.5104873.v1
null
Nitrile
Aldehyde
null
null
c1ccc2[nH]cnc2c1.c1ccccc1.c1cccnc1
Other
C1(=CC=CC=C1)C
null
6
Cc1cc(C#N)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12.O>C1(=CC=CC=C1)C>Cc1cc(C=O)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-eb2391b5125742e28ea0f4edae1dc953
Cc1cc(C(N)=O)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12>>Cc1cc(CN)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12
ClC=1C=C(C=CC1)C(CNC1=C(C(NC=C1)=O)C=1NC2=C(N1)C(=CC(=C2)C(=O)N)C)O>>NCC=1C=C(C2=C(NC(=N2)C=2C(NC=CC2NCC(O)C2=CC(=CC=C2)Cl)=O)C1)C
O=[C:5]([c:4]1[cH:3][c:2]([CH3:1])[c:30]2[c:8]([cH:7]1)[nH:9][c:10](-[c:11]1[c:12]([NH:13][CH2:14][CH:15]([OH:16])[c:17]3[cH:18][cH:19][cH:20][c:21]([Cl:22])[cH:23]3)[cH:24][cH:25][nH:26][c:27]1=[O:28])[n:29]2)[NH2:6]>>[CH3:1][c:2]1[cH:3][c:4]([CH2:5][NH2:6])[cH:7][c:8]2[nH:9][c:10](-[c:11]3[c:12]([NH:13][CH2:14][CH:15...
Cc1cc(C(N)=O)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12
Cc1cc(CN)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12
null
null
C1CCOC1
Reduction
Reduction of primary amides to amines
71f4ab6e4ff9fd6ad8fb6a6879cdc6c258d35bb85b9b40ad2783b874bf909ba4
8776a0c3e2f32dafe87200a597cd55df0b01414bf133bdc9f8f7e1171014bfad
O=c1[nH]ccc(NCCc2ccccc2)c1-c1nc2ccccc2[nH]1
O=[C;H0;D3;+0:1](-[N;D1;H2:2])-[c:3](:[c:4]):[c:5]:[c:6]:[#7;a:7]>>[#7;a:7]:[c:6]:[c:5]:[c:3](-[CH2;D2;+0:1]-[N;D1;H2:2]):[c:4]
60
[{"value": 60.0, "product": "NCC=1C=C(C2=C(NC(=N2)C=2C(NC=CC2NCC(O)C2=CC(=CC=C2)Cl)=O)C1)C", "details": "PERCENTYIELD", "is_desired": false}, {"value": 59.0, "product": "NCC=1C=C(C2=C(NC(=N2)C=2C(NC=CC2NCC(O)C2=CC(=CC=C2)Cl)=O)C1)C", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
10
HOUR
To a solution of (±)-2-{4-[2-(3-Chloro-phenyl)-2-hydroxyethyl amino]-2-oxo-1,2-dihydro-pyridin-3-yl}-7-methyl-3H-benzimidazole-5-carboxylic acid amide (20 mg, 0.046 mmol) in THF (1 mL) was added borane-tetrahydrofuran complex (1 M solution) (0.45 mL, 0.45 mmol). The reaction mixture was stirred at room temperature for ...
10.6084/m9.figshare.5104873.v1
null
Primary amide
null
null
null
c1ccc2[nH]cnc2c1.c1ccccc1.c1cccnc1
Other
C1CCOC1
null
10
Cc1cc(C(N)=O)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12>C1CCOC1>Cc1cc(CN)cc2[nH]c(-c3c(NCC(O)c4cccc(Cl)c4)cc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-4ae23718e7aa4596a65986ea647e0ce5
Cc1cc(Br)cc2[nH]c(-c3c(N[C@H](COC(c4ccccc4)(c4ccccc4)c4ccccc4)Cc4ccccc4)cc[nH]c3=O)nc12.OB(O)c1ccccc1>>Cc1cc(-c2ccccc2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
C(C1=CC=CC=C1)[C@@H](COC(C1=CC=CC=C1)(C1=CC=CC=C1)C1=CC=CC=C1)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)Br.C1(=CC=CC=C1)B(O)O.C(=O)([O-])[O-].[K+].[K+]>>C(C1=CC=CC=C1)[C@@H](CO)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)C2=CC=CC=C2
Br[c:4]1[cH:3][c:2]([CH3:1])[c:34]2[c:12]([cH:11]1)[nH:13][c:14](-[c:15]1[c:16]([NH:17][C@H:18]([CH2:19][O:20]C(c3ccccc3)(c3ccccc3)c3ccccc3)[CH2:21][c:22]3[cH:23][cH:24][cH:25][cH:26][cH:27]3)[cH:28][cH:29][nH:30][c:31]1=[O:32])[n:33]2.OB(O)[c:5]1[cH:6][cH:7][cH:8][cH:9][cH:10]1>>[CH3:1][c:2]1[cH:3][c:4](-[c:5]2[cH:6][...
Cc1cc(Br)cc2[nH]c(-c3c(N[C@H](COC(c4ccccc4)(c4ccccc4)c4ccccc4)Cc4ccccc4)cc[nH]c3=O)nc12.OB(O)c1ccccc1
Cc1cc(-c2ccccc2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
null
C=1C=CC(=CC1)[P](C=2C=CC=CC2)(C=3C=CC=CC3)[Pd]([P](C=4C=CC=CC4)(C=5C=CC=CC5)C=6C=CC=CC6)([P](C=7C=CC=CC7)(C=8C=CC=CC8)C=9C=CC=CC9)[P](C=1C=CC=CC1)(C=1C=CC=CC1)C=1C=CC=CC1
C(Cl)Cl.C1CCOC1
C-C Coupling
OtherReaction
afa2967cd6cfa90907cacc9db0b4020ddf2593fff80fec2a65bfcf628dc90103
9813dfd61e5b23fc207abc2f1b5b582107ee9cff82209022f6e85dc6d65f6dc2
O=c1[nH]ccc(NCCc2ccccc2)c1-c1nc2ccc(-c3ccccc3)cc2[nH]1
Br-[c;H0;D3;+0:1]1:[c:2]:[c:3]2:[#7;a:4]:[c:5]:[#7;a:6]:[c:7]:2:[c:8]:[c:9]:1.[C:10]-[C:11]-[O;H0;D2;+0:12]-C(-c1:c:c:c:c:c:1)(-c1:c:c:c:c:c:1)-c1:c:c:c:c:c:1.O-B(-O)-[c;H0;D3;+0:13](:[c:14]:[c:15]):[c:16]:[c:17]>>[C:10]-[C:11]-[OH;D1;+0:12].[c:17]:[c:16]:[c;H0;D3;+0:13](-[c;H0;D3;+0:1]1:[c:2]:[c:3]2:[#7;a:4]:[c:5]:[#7...
52.4
[{"value": 34.0, "product": "C(C1=CC=CC=C1)[C@@H](CO)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)C2=CC=CC=C2", "details": "PERCENTYIELD", "is_desired": false}, {"value": 52.4, "product": "C(C1=CC=CC=C1)[C@@H](CO)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)C2=CC=CC=C2", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
null
null
To a solution of (S)-4-(1-benzyl-2-trityloxy-ethylamino)-3-[6-bromo-4-methyl-1H-benzimidazole-2-yl]-1H-pyridin-2-one (50 mg, 0.072 mmol), phenylboronic acid (13 mg, 0.11 mmol), and 2 M K2CO3 (0.108 mL, 0.22 mmol) in THF (5 mL) was added Pd(PPh3)4 (8.3 mg, 0.007 mmol). The mixture was heated to reflux 14 h. Upon cooling...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Ether.Boronic acid
Primary alcohol
c1ccc2[nH]cnc2c1.c1ccccc1.c1ccccc1.c1ccccc1.c1ccccc1
c1ccccc1.c1ccc2[nH]cnc2c1
c1ccccc1.c1ccc2[nH]cnc2c1.c1ccccc1.c1cccnc1
HBr.B
C=1C=CC(=CC1)[P](C=2C=CC=CC2)(C=3C=CC=CC3)[Pd]([P](C=4C=CC=CC4)(C=5C=CC=CC5)C=6C=CC=CC6)([P](C=7C=CC=CC7)(C=8C=CC=CC8)C=9C=CC=CC9)[P](C=1C=CC=CC1)(C=1C=CC=CC1)C=1C=CC=CC1.C(Cl)Cl.C1CCOC1
null
null
Cc1cc(Br)cc2[nH]c(-c3c(N[C@H](COC(c4ccccc4)(c4ccccc4)c4ccccc4)Cc4ccccc4)cc[nH]c3=O)nc12.OB(O)c1ccccc1>C=1C=CC(=CC1)[P](C=2C=CC=CC2)(C=3C=CC=CC3)[Pd]([P](C=4C=CC=CC4)(C=5C=CC=CC5)C=6C=CC=CC6)([P](C=7C=CC=CC7)(C=8C=CC=CC8)C=9C=CC=CC9)[P](C=1C=CC=CC1)(C=1C=CC=CC1)C=1C=CC=CC1.C(Cl)Cl.C1CCOC1>Cc1cc(-c2ccccc2)cc2[nH]c(-c3c(N...
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-68323d92230442dfaae55347f4251932
C1COCCN1.Cc1cc(Br)cc2[nH]c(-c3c(N[C@H](COC(c4ccccc4)(c4ccccc4)c4ccccc4)Cc4ccccc4)cc[nH]c3=O)nc12>>Cc1cc(N2CCOCC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
C(C1=CC=CC=C1)[C@@H](COC(C1=CC=CC=C1)(C1=CC=CC=C1)C1=CC=CC=C1)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)Br.N1CCOCC1.C(C)(C)(C)P(C(C)(C)C)C(C)(C)C.CC(C)([O-])C.[Na+].O1CCOCC1.Cl>>C(C1=CC=CC=C1)[C@@H](CO)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCOCC2
[NH:5]1[CH2:6][CH2:7][O:8][CH2:9][CH2:10]1.Br[c:4]1[cH:3][c:2]([CH3:1])[c:34]2[c:12]([cH:11]1)[nH:13][c:14](-[c:15]1[c:16]([NH:17][C@H:18]([CH2:19][O:20]C(c3ccccc3)(c3ccccc3)c3ccccc3)[CH2:21][c:22]3[cH:23][cH:24][cH:25][cH:26][cH:27]3)[cH:28][cH:29][nH:30][c:31]1=[O:32])[n:33]2>>[CH3:1][c:2]1[cH:3][c:4]([N:5]2[CH2:6][C...
C1COCCN1.Cc1cc(Br)cc2[nH]c(-c3c(N[C@H](COC(c4ccccc4)(c4ccccc4)c4ccccc4)Cc4ccccc4)cc[nH]c3=O)nc12
Cc1cc(N2CCOCC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
null
C(C)(=O)[O-].[Pd+2].C(C)(=O)[O-]
C1(=CC=CC=C1)C.CCOC(=O)C
Heteroatom Alkylation and Arylation
OtherReaction
28ca84ddeb7904ab5e67d3ac0fe92f6e14d4f0a6629e67633a41e0c1a4a94893
642417fb39951d82c019f2a0f9132eeb9588d3fabe5b026a631b7cc9431a9073
O=c1[nH]ccc(NCCc2ccccc2)c1-c1nc2ccc(N3CCOCC3)cc2[nH]1
Br-[c;H0;D3;+0:1]1:[c:2]:[c:3]2:[#7;a:4]:[c:5]:[#7;a:6]:[c:7]:2:[c:8]:[c:9]:1.[C:10]-[C:11]-[O;H0;D2;+0:12]-C(-c1:c:c:c:c:c:1)(-c1:c:c:c:c:c:1)-c1:c:c:c:c:c:1.[#8:13]1-[C:14]-[C:15]-[NH;D2;+0:16]-[C:17]-[C:18]-1>>[#7;a:4]1:[c:5]:[#7;a:6]:[c:7]2:[c:8]:[c:9]:[c;H0;D3;+0:1](-[N;H0;D3;+0:16]3-[C:17]-[C:18]-[#8:13]-[C:14]-[...
18.1
[{"value": 18.0, "product": "C(C1=CC=CC=C1)[C@@H](CO)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCOCC2", "details": "PERCENTYIELD", "is_desired": false}, {"value": 18.1, "product": "C(C1=CC=CC=C1)[C@@H](CO)NC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCOCC2", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
100
CELSIUS
null
null
A mixture of (S)-4-(1-benzyl-2-trityloxy-ethylamino)-3-[6-bromo-4-methyl-1H-benzimidazol-2-yl]-1H-pyridin-2-one (150 mg, 0.216 mmol), morpholine (28.2 mg, 0.324 mmol), palladium acetate (2.4 mg, 0.01 mmol), tri-tert-buylphosphine (4.4 mg, 0.02 mmol), and sodium tert-butoxide (104 mg, 1.08 mmol) in toluene (5 mL) was he...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Ether.Secondary amine
Primary alcohol.Tertiary amine
C1COCCN1.c1ccc2[nH]cnc2c1.c1ccccc1.c1ccccc1.c1ccccc1
C1COCC[NH]1.c1ccc2[nH]cnc2c1
C1COCC[NH]1.c1ccc2[nH]cnc2c1.c1ccccc1.c1cccnc1
HBr
C(C)(=O)[O-].[Pd+2].C(C)(=O)[O-].C1(=CC=CC=C1)C.CCOC(=O)C
100
null
C1COCCN1.Cc1cc(Br)cc2[nH]c(-c3c(N[C@H](COC(c4ccccc4)(c4ccccc4)c4ccccc4)Cc4ccccc4)cc[nH]c3=O)nc12>C(C)(=O)[O-].[Pd+2].C(C)(=O)[O-].C1(=CC=CC=C1)C.CCOC(=O)C>Cc1cc(N2CCOCC2)cc2[nH]c(-c3c(N[C@H](CO)Cc4ccccc4)cc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-33034dc610184844a7c12e8c1cd62ff1
NC(=O)Cl.NC1CCNCC1>>NC(=O)C1CCN(N)CC1
NC1CCNCC1.CCN(C(C)C)C(C)C.C(N)(=O)Cl>>C(N)(=O)C1CCN(CC1)N
Cl[C:2]([NH2:1])=[O:3].[CH:4]1([NH2:8])[CH2:5][CH2:6][NH:7][CH2:9][CH2:10]1>>[NH2:1][C:2](=[O:3])[CH:4]1[CH2:5][CH2:6][N:7]([NH2:8])[CH2:9][CH2:10]1
NC(=O)Cl.NC1CCNCC1
NC(=O)C1CCN(N)CC1
null
null
CO
C-C Coupling
OtherReaction
19dab72856335101e04553fa3203adf6758f5225a3027c8737bbc69f4c776089
8af179218b5e47386544b64b515e8e793746d3aa61eaa2708c1a752575ae95e7
C1CCNCC1
Cl-[C;H0;D3;+0:1](-[N;D1;H2:2])=[O;D1;H0:3].[NH2;D1;+0:4]-[CH;D3;+0:5]1-[C:6]-[C:7]-[NH;D2;+0:8]-[C:9]-[C:10]-1>>[N;D1;H2:2]-[C;H0;D3;+0:1](=[O;D1;H0:3])-[CH;D3;+0:5]1-[C:6]-[C:7]-[N;H0;D3;+0:8](-[NH2;D1;+0:4])-[C:9]-[C:10]-1
null
[]
null
null
8
HOUR
A solution of the 4-amino-piperidine compound (˜50–100 umol) in 5 ml MeOH is cooled to 0° C. Then 10 equivalent of Huenigs base and ˜3 equivalent of carbamoyl chloride are added. The vial is shaken once and allowed to stand at ambient temperature overnight. Evaporation of volatiles and purification by prep. HPLC gives ...
10.6084/m9.figshare.5104873.v1
null
Acyl halide.Primary amide.Primary amine.Secondary amine
Hydrazine.Primary amide
C1CCNCC1
C1CC[NH]CC1
C1CC[NH]CC1
HCl
CO
null
8
NC(=O)Cl.NC1CCNCC1>CO>NC(=O)C1CCN(N)CC1
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-9de6242fa83b44d2bf38ec6206d1b02c
C1COCCN1.O=Cc1cc(Br)c2nc(-c3c(NC[C@@H](O)c4cccc(Cl)c4)cc[nH]c3=O)[nH]c2c1>>O=c1[nH]ccc(NC[C@@H](O)c2cccc(Cl)c2)c1-c1nc2c(Br)cc(CN3CCOCC3)cc2[nH]1
[BH3-]C#N.[Na+].BrC1=CC(=CC2=C1N=C(N2)C=2C(NC=CC2NC[C@@H](O)C2=CC(=CC=C2)Cl)=O)C=O.N1CCOCC1>>BrC1=CC(=CC=2NC(=NC21)C=2C(NC=CC2NC[C@@H](O)C2=CC(=CC=C2)Cl)=O)CN2CCOCC2
[NH:27]1[CH2:28][CH2:29][O:30][CH2:31][CH2:32]1.O=[CH:26][c:25]1[cH:24][c:22]([Br:23])[c:21]2[n:20][c:19](-[c:18]3[c:2](=[O:1])[nH:3][cH:4][cH:5][c:6]3[NH:7][CH2:8][C@@H:9]([OH:10])[c:11]3[cH:12][cH:13][cH:14][c:15]([Cl:16])[cH:17]3)[nH:35][c:34]2[cH:33]1>>[O:1]=[c:2]1[nH:3][cH:4][cH:5][c:6]([NH:7][CH2:8][C@@H:9]([OH:1...
C1COCCN1.O=Cc1cc(Br)c2nc(-c3c(NC[C@@H](O)c4cccc(Cl)c4)cc[nH]c3=O)[nH]c2c1
O=c1[nH]ccc(NC[C@@H](O)c2cccc(Cl)c2)c1-c1nc2c(Br)cc(CN3CCOCC3)cc2[nH]1
null
null
CO
Heteroatom Alkylation and Arylation
reductive amination
073d98e7dcd77aafeef71a76da7e61b2751c934600f6fff04db700a08f3e4453
2d03f38884b1fbb0c0d6e6f2de31afb25102fec87f347c3a123e064c1bfef0ad
O=c1[nH]ccc(NCCc2ccccc2)c1-c1nc2ccc(CN3CCOCC3)cc2[nH]1
O=[CH;D2;+0:1]-[c:2](:[c:3]):[c:4]:[c:5]:[#7;a:6].[#8:7]1-[C:8]-[C:9]-[NH;D2;+0:10]-[C:11]-[C:12]-1>>[#7;a:6]:[c:5]:[c:4]:[c:2](-[CH2;D2;+0:1]-[N;H0;D3;+0:10]1-[C:9]-[C:8]-[#8:7]-[C:12]-[C:11]-1):[c:3]
45
[{"value": 45.0, "product": "BrC1=CC(=CC=2NC(=NC21)C=2C(NC=CC2NC[C@@H](O)C2=CC(=CC=C2)Cl)=O)CN2CCOCC2", "details": "PERCENTYIELD", "is_desired": false}]
null
null
1
HOUR
To a solution of (S)-7-Bromo-2-{4-[2-(3-chloro-phenyl)-2-hydroxy-ethylamino]-2-oxo-1,2-dihydro-pyridin-3-yl}-3H-benzimidazole-5-carbaldehyde (130 mg, 0.27 mmol) in methanol (60 mL) was added morpholine (0.2 mL, excess). The reaction mixture was stirred 1 h at room temperature. Then NaCNBH3 (1M THF solution, 1.35 mL, 1....
10.6084/m9.figshare.5104873.v1
null
Aldehyde.Secondary amine
Tertiary amine
C1COCCN1
C1COCC[NH]1
c1cccnc1.c1ccccc1.c1ccc2[nH]cnc2c1.C1COCC[NH]1
Other
CO
null
1
C1COCCN1.O=Cc1cc(Br)c2nc(-c3c(NC[C@@H](O)c4cccc(Cl)c4)cc[nH]c3=O)[nH]c2c1>CO>O=c1[nH]ccc(NC[C@@H](O)c2cccc(Cl)c2)c1-c1nc2c(Br)cc(CN3CCOCC3)cc2[nH]1
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-25e7603e3e8f415fab1e2c2360534542
CN1CCN(Cc2cc(Br)c3nc(-c4c(NC[C@@H](O)c5cccc(Cl)c5)cc[nH]c4=O)[nH]c3c2)CC1.[CH3][Sn]([CH3])([CH3])[CH3]>>Cc1cc(CN2CCN(C)CC2)cc2[nH]c(-c3c(NC[C@@H](O)c4cccc(Cl)c4)cc[nH]c3=O)nc12
BrC1=CC(=CC=2NC(=NC21)C=2C(NC=CC2NC[C@@H](O)C2=CC(=CC=C2)Cl)=O)CN2CCN(CC2)C.C[Sn](C)(C)C.[F-].[K+]>>ClC=1C=C(C=CC1)[C@@H](CNC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)CN2CCN(CC2)C)O
Br[c:2]1[cH:3][c:4]([CH2:5][N:6]2[CH2:7][CH2:8][N:9]([CH3:10])[CH2:11][CH2:12]2)[cH:13][c:14]2[nH:15][c:16](-[c:17]3[c:18]([NH:19][CH2:20][C@@H:21]([OH:22])[c:23]4[cH:24][cH:25][cH:26][c:27]([Cl:28])[cH:29]4)[cH:30][cH:31][nH:32][c:33]3=[O:34])[n:35][c:36]12.[CH3][Sn]([CH3])([CH3])[CH3:1]>>[CH3:1][c:2]1[cH:3][c:4]([CH2...
CN1CCN(Cc2cc(Br)c3nc(-c4c(NC[C@@H](O)c5cccc(Cl)c5)cc[nH]c4=O)[nH]c3c2)CC1.[CH3][Sn]([CH3])([CH3])[CH3]
Cc1cc(CN2CCN(C)CC2)cc2[nH]c(-c3c(NC[C@@H](O)c4cccc(Cl)c4)cc[nH]c3=O)nc12
null
null
CN(C)C=O
C-C Coupling
Stille reaction_other
67cae9395236f76d71cd1c9cfc6def0d0c8bc8fcb4fc867ab6b50d5f00aa9211
db27eeefac0475c6d74fa10b3167e95a61caaae74e8bbafd45892452c0c3d4d6
O=c1[nH]ccc(NCCc2ccccc2)c1-c1nc2ccc(CN3CCNCC3)cc2[nH]1
Br-[c;H0;D3;+0:1]1:[c:2]:[c:3]:[c:4]:[c:5]2:[#7;a:6]:[c:7]:[#7;a:8]:[c:9]:2:1.[CH3;D1;+0:10]-[Sn](-[CH3])(-[CH3])-[CH3]>>[CH3;D1;+0:10]-[c;H0;D3;+0:1]1:[c:2]:[c:3]:[c:4]:[c:5]2:[#7;a:6]:[c:7]:[#7;a:8]:[c:9]:2:1
48
[{"value": 48.0, "product": "ClC=1C=C(C=CC1)[C@@H](CNC1=C(C(NC=C1)=O)C1=NC2=C(N1)C=C(C=C2C)CN2CCN(CC2)C)O", "details": "PERCENTYIELD", "is_desired": false}]
100
CELSIUS
null
null
Through a mixture of (S)-3-[4-Bromo-6-(4-methyl-piperazin-1-ylmethyl)-1H-benzimidazol-2-yl]-4-[2-(3-chloro-phenyl)-2-hydroxy-ethylamino]-1H-pyridin-2-one (80 mg, 0.14 mmol), tetramethyl tin (2.5 mL, excess), PdCl2 (PPh3)4 (10 mg, 0.014 mmol), and KF (40 mg, 0.7 mmol) in DMF (2 mL) in a vial was bubbled nitrogen, sealed...
10.6084/m9.figshare.5104873.v1
null
Aromatic halide.Tin
null
c1ccc2[nH]cnc2c1
c1ccc2[nH]cnc2c1
C1C[NH]CC[NH]1.c1ccc2[nH]cnc2c1.c1ccccc1.c1cccnc1
HBr.Sn
CN(C)C=O
100
null
CN1CCN(Cc2cc(Br)c3nc(-c4c(NC[C@@H](O)c5cccc(Cl)c5)cc[nH]c4=O)[nH]c3c2)CC1.[CH3][Sn]([CH3])([CH3])[CH3]>CN(C)C=O>Cc1cc(CN2CCN(C)CC2)cc2[nH]c(-c3c(NC[C@@H](O)c4cccc(Cl)c4)cc[nH]c3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-726b6a0725b1421a8ba3f63c4b0f73c4
Cc1cc(N2CCOCC2)cc2c1nc(C1=C(NC[C@@H](O)c3cccc(Cl)c3)CN(S(=O)(=O)C(F)(F)F)C1=O)n2C(=O)OC(C)(C)C.Cc1cc(N2CCOCC2)cc2c1nc(C1=C(O)CNC1=O)n2C(=O)OC(C)(C)C>>COc1ccc(C(O)CNC2=C(c3nc4c(C)cc(N5CCOCC5)cc4n3C(=O)OC(C)(C)C)C(=O)N(S(=O)(=O)C(F)(F)F)C2)cc1Cl
OC1=C(C(NC1)=O)C1=NC2=C(N1C(=O)OC(C)(C)C)C=C(C=C2C)N2CCOCC2.ClC=1C=C(C=CC1)[C@@H](CNC1=C(C(N(C1)S(=O)(=O)C(F)(F)F)=O)C1=NC2=C(N1C(=O)OC(C)(C)C)C=C(C=C2C)N2CCOCC2)O>>ClC=1C=C(C=CC1OC)C(CNC1=C(C(N(C1)S(=O)(=O)C(F)(F)F)=O)C1=NC2=C(N1C(=O)OC(C)(C)C)C=C(C=C2C)N2CCOCC2)O
[cH:3]1[cH:4][cH:5][c:6]([C@H:7]([OH:8])[CH2:9][NH:10][C:11]2=[C:12]([c:13]3[n:14][c:15]4[c:16]([CH3:17])[cH:18][c:19]([N:20]5[CH2:21][CH2:22][O:23][CH2:24][CH2:25]5)[cH:26][c:27]4[n:28]3[C:29](=[O:30])[O:31][C:32]([CH3:33])([CH3:34])[CH3:35])[C:36](=[O:37])[N:38]([S:39](=[O:40])(=[O:41])[C:42]([F:43])([F:44])[F:45])[C...
Cc1cc(N2CCOCC2)cc2c1nc(C1=C(NC[C@@H](O)c3cccc(Cl)c3)CN(S(=O)(=O)C(F)(F)F)C1=O)n2C(=O)OC(C)(C)C.Cc1cc(N2CCOCC2)cc2c1nc(C1=C(O)CNC1=O)n2C(=O)OC(C)(C)C
COc1ccc(C(O)CNC2=C(c3nc4c(C)cc(N5CCOCC5)cc4n3C(=O)OC(C)(C)C)C(=O)N(S(=O)(=O)C(F)(F)F)C2)cc1Cl
null
null
C(C)#N
Heteroatom Alkylation and Arylation
OtherReaction
4515a50e14267aca11ea1959a285f9440c16001837a98e5f78bf1b63e016508a
8cf563015e64cb43f3591e9989d682e9691b3ada12c6d21e1870366f30219534
O=C1NCC(NCCc2ccccc2)=C1c1nc2ccc(N3CCOCC3)cc2[nH]1
C-c1:c:c(-N2-C-C-O-C-C-2):c:c2:c:1:n:c(-C1=[C;H0;D3;+0:1](-[OH;D1;+0:2])-C-N-C-1=O):n:2-C(=O)-O-C(-C)(-C)-C.[Cl;D1;H0:3]-[c:4](:[c:5]):[cH;D2;+0:6]:[c:7]:[c:8]>>[CH3;D1;+0:1]-[O;H0;D2;+0:2]-[c;H0;D3;+0:6](:[c:7]:[c:8]):[c:4](-[Cl;D1;H0:3]):[c:5]
35
[{"value": 35.0, "product": "ClC=1C=C(C=CC1OC)C(CNC1=C(C(N(C1)S(=O)(=O)C(F)(F)F)=O)C1=NC2=C(N1C(=O)OC(C)(C)C)C=C(C=C2C)N2CCOCC2)O", "details": "PERCENTYIELD", "is_desired": false}]
null
null
null
null
4-Hydroxy-3-(1-tert-butyloxycarbonyl-4-methyl-6-morpholin-4-yl-1H-benzoimidazol-2-yl)-1,5-dihydro-pyrrol-2-one (0.032 g, 0.059 mmol) was reacted as described in the procedure used to synthesize (S)-4-[2-(3-chloro-phenyl)-2-hydroxy-ethylamino]-3-(1-tert-butyloxycarbonyl-4-methyl-6-morpholin-4-yl-1H-benzoimidazol-2-yl)-1...
10.6084/m9.figshare.5104873.v1
null
Ether.Ether.Secondary amide.Enol.Tertiary amine.Boc
Ether
c1ccccc1.C1COCCN1.c1ccc2[nH]cnc2c1.C1=CCNC1
c1ccccc1
c1ccccc1.c1ccc2[nH]cnc2c1.C1COCC[NH]1.C1=CC[NH]C1
HO-
C(C)#N
null
null
Cc1cc(N2CCOCC2)cc2c1nc(C1=C(NC[C@@H](O)c3cccc(Cl)c3)CN(S(=O)(=O)C(F)(F)F)C1=O)n2C(=O)OC(C)(C)C.Cc1cc(N2CCOCC2)cc2c1nc(C1=C(O)CNC1=O)n2C(=O)OC(C)(C)C>C(C)#N>COc1ccc(C(O)CNC2=C(c3nc4c(C)cc(N5CCOCC5)cc4n3C(=O)OC(C)(C)C)C(=O)N(S(=O)(=O)C(F)(F)F)C2)cc1Cl
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-8bc663c636c34e30b341ffef7a30b772
COc1ccc(C(O)CNC2=C(c3nc4c(C)cc(N5CCOCC5)cc4n3C(=O)OC(C)(C)C)C(=O)N(S(=O)(=O)C(F)(F)F)C2)cc1Cl>>COc1ccc(C(O)CNC2=C(c3nc4c(C)cc(N5CCOCC5)cc4[nH]3)C(=O)NC2)cc1Cl
ClC=1C=C(C=CC1OC)C(CNC1=C(C(N(C1)S(=O)(=O)C(F)(F)F)=O)C1=NC2=C(N1C(=O)OC(C)(C)C)C=C(C=C2C)N2CCOCC2)O.ClC=1C=C(C=CC1)[C@@H](CNC1=C(C(NC1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCOCC2)O>>ClC=1C=C(C=CC1OC)C(CNC1=C(C(NC1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCOCC2)O
CC(C)(C)OC(=O)[n:28]1[c:13]([C:12]2=[C:11]([NH:10][CH2:9][CH:7]([c:6]3[cH:5][cH:4][c:3]([O:2][CH3:1])[c:34]([Cl:35])[cH:33]3)[OH:8])[CH2:32][N:31](S(=O)(=O)C(F)(F)F)[C:29]2=[O:30])[n:14][c:15]2[c:16]([CH3:17])[cH:18][c:19]([N:20]3[CH2:21][CH2:22][O:23][CH2:24][CH2:25]3)[cH:26][c:27]21>>[CH3:1][O:2][c:3]1[cH:4][cH:5][c:...
COc1ccc(C(O)CNC2=C(c3nc4c(C)cc(N5CCOCC5)cc4n3C(=O)OC(C)(C)C)C(=O)N(S(=O)(=O)C(F)(F)F)C2)cc1Cl
COc1ccc(C(O)CNC2=C(c3nc4c(C)cc(N5CCOCC5)cc4[nH]3)C(=O)NC2)cc1Cl
null
null
null
Reduction
OtherReaction
2f11a948f4e357206835e0387eaef9d4eff33ee011003551d4339449b953a4e0
3c18ba9ff13d6939ae55af454539aa1d409cfd52b5cc70c0158f2cca2d3a298a
O=C1NCC(NCCc2ccccc2)=C1c1nc2ccc(N3CCOCC3)cc2[nH]1
C-C(-C)(-C)-O-C(=O)-[n;H0;D3;+0:1]1:[c:2](-[C:3]2=[C:4](-[#7:5])-[C:6]-[N;H0;D3;+0:7](-S(=O)(=O)-C(-F)(-F)-F)-[C:8]-2=[O;D1;H0:9]):[#7;a:10]:[c:11](:[c:12]):[c:13]:1:[c:14]>>[#7:5]-[C:4]1=[C:3](-[c:2]2:[#7;a:10]:[c:11](:[c:12]):[c:13](:[c:14]):[nH;D2;+0:1]:2)-[C:8](=[O;D1;H0:9])-[NH;D2;+0:7]-[C:6]-1
60.2
[{"value": 59.0, "product": "ClC=1C=C(C=CC1OC)C(CNC1=C(C(NC1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCOCC2)O", "details": "PERCENTYIELD", "is_desired": false}, {"value": 60.2, "product": "ClC=1C=C(C=CC1OC)C(CNC1=C(C(NC1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCOCC2)O", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
null
null
4-[2-(3-Chloro-4-methoxy-phenyl)-2-hydroxy-ethylamino]-3-(1-tert-butyloxycarbonyl-4-methyl-6-morpholin-4-yl-1H-benzoimidazol-2-yl)-1-trifluoromethanesulfonyl-1,5-dihydro-pyrrol-2-one (0.017 g, 0.023 mmol) was reacted according to the procedure used to synthesize (S)-4-[2-(3-chloro-phenyl)-2-hydroxy-ethylamino]-3-(4-met...
10.6084/m9.figshare.5104873.v1
null
Tertiary halide.Tertiary halide.Tertiary halide.Ether.Tertiary amide.Boc
Secondary amide
C1=CC[NH]C1.c1ccc2nc[nH]c2c1
c1ccc2[nH]cnc2c1.C1=CCNC1
c1ccccc1.c1ccc2[nH]cnc2c1.C1COCC[NH]1.C1=CCNC1
HF
null
null
null
COc1ccc(C(O)CNC2=C(c3nc4c(C)cc(N5CCOCC5)cc4n3C(=O)OC(C)(C)C)C(=O)N(S(=O)(=O)C(F)(F)F)C2)cc1Cl>>COc1ccc(C(O)CNC2=C(c3nc4c(C)cc(N5CCOCC5)cc4[nH]3)C(=O)NC2)cc1Cl
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-70e0ffd8e5a940b28702b704dfc02679
COc1ccc(C(O)CNC2=C(c3nc4c(C)cc(N5CCOCC5)cc4n3C(=O)OC(C)(C)C)C(=O)N(S(=O)(=O)C(F)(F)F)C2)cc1Br>>COc1ccc(C(O)CNC2=C(c3nc4c(C)cc(N5CCOCC5)cc4[nH]3)C(=O)NC2)cc1Br
BrC=1C=C(C=CC1OC)C(CNC1=C(C(N(C1)S(=O)(=O)C(F)(F)F)=O)C1=NC2=C(N1C(=O)OC(C)(C)C)C=C(C=C2C)N2CCOCC2)O.ClC=1C=C(C=CC1)[C@@H](CNC1=C(C(NC1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCOCC2)O>>BrC=1C=C(C=CC1OC)C(CNC1=C(C(NC1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCOCC2)O
CC(C)(C)OC(=O)[n:28]1[c:13]([C:12]2=[C:11]([NH:10][CH2:9][CH:7]([c:6]3[cH:5][cH:4][c:3]([O:2][CH3:1])[c:34]([Br:35])[cH:33]3)[OH:8])[CH2:32][N:31](S(=O)(=O)C(F)(F)F)[C:29]2=[O:30])[n:14][c:15]2[c:16]([CH3:17])[cH:18][c:19]([N:20]3[CH2:21][CH2:22][O:23][CH2:24][CH2:25]3)[cH:26][c:27]21>>[CH3:1][O:2][c:3]1[cH:4][cH:5][c:...
COc1ccc(C(O)CNC2=C(c3nc4c(C)cc(N5CCOCC5)cc4n3C(=O)OC(C)(C)C)C(=O)N(S(=O)(=O)C(F)(F)F)C2)cc1Br
COc1ccc(C(O)CNC2=C(c3nc4c(C)cc(N5CCOCC5)cc4[nH]3)C(=O)NC2)cc1Br
null
null
null
Reduction
OtherReaction
2f11a948f4e357206835e0387eaef9d4eff33ee011003551d4339449b953a4e0
3c18ba9ff13d6939ae55af454539aa1d409cfd52b5cc70c0158f2cca2d3a298a
O=C1NCC(NCCc2ccccc2)=C1c1nc2ccc(N3CCOCC3)cc2[nH]1
C-C(-C)(-C)-O-C(=O)-[n;H0;D3;+0:1]1:[c:2](-[C:3]2=[C:4](-[#7:5])-[C:6]-[N;H0;D3;+0:7](-S(=O)(=O)-C(-F)(-F)-F)-[C:8]-2=[O;D1;H0:9]):[#7;a:10]:[c:11](:[c:12]):[c:13]:1:[c:14]>>[#7:5]-[C:4]1=[C:3](-[c:2]2:[#7;a:10]:[c:11](:[c:12]):[c:13](:[c:14]):[nH;D2;+0:1]:2)-[C:8](=[O;D1;H0:9])-[NH;D2;+0:7]-[C:6]-1
54.5
[{"value": 54.0, "product": "BrC=1C=C(C=CC1OC)C(CNC1=C(C(NC1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCOCC2)O", "details": "PERCENTYIELD", "is_desired": false}, {"value": 54.5, "product": "BrC=1C=C(C=CC1OC)C(CNC1=C(C(NC1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCOCC2)O", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
null
null
4-[2-(3-Bromo-4-methoxy-phenyl)-2-hydroxy-ethylamino]-3-(1-tert-butyloxycarbonyl-4-methyl-6-morpholin-4-yl-1H-benzoimidazol-2-yl)-1-trifluoromethanesulfonyl-1,5-dihydro-pyrrol-2-one (0.018 g, 0.023 mmol) was reacted according to the procedure used to synthesize (S)-4-[2-(3-chloro-phenyl)-2-hydroxy-ethylamino]-3-(4-meth...
10.6084/m9.figshare.5104873.v1
null
Tertiary halide.Tertiary halide.Tertiary halide.Ether.Tertiary amide.Boc
Secondary amide
C1=CC[NH]C1.c1ccc2nc[nH]c2c1
c1ccc2[nH]cnc2c1.C1=CCNC1
c1ccccc1.c1ccc2[nH]cnc2c1.C1COCC[NH]1.C1=CCNC1
HF
null
null
null
COc1ccc(C(O)CNC2=C(c3nc4c(C)cc(N5CCOCC5)cc4n3C(=O)OC(C)(C)C)C(=O)N(S(=O)(=O)C(F)(F)F)C2)cc1Br>>COc1ccc(C(O)CNC2=C(c3nc4c(C)cc(N5CCOCC5)cc4[nH]3)C(=O)NC2)cc1Br
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-d863f6bcdd0446a9923caa55a7dc45dc
Cc1cc(N2CCOCC2)cc2c1nc(C1=C(NC[C@@H](O)c3cccc(Cl)c3)CN(S(=O)(=O)C(F)(F)F)C1=O)n2C(=O)OC(C)(C)C>>Cc1cc(N2CCOCC2)cc2[nH]c(C3=C(NC[C@@H](O)c4cccc(Cl)c4)CNC3=O)nc12
Cl.ClC=1C=C(C=CC1)[C@@H](CNC1=C(C(N(C1)S(=O)(=O)C(F)(F)F)=O)C1=NC2=C(N1C(=O)OC(C)(C)C)C=C(C=C2C)N2CCOCC2)O.O.ClCCl>>ClC=1C=C(C=CC1)[C@@H](CNC1=C(C(NC1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCOCC2)O
CC(C)(C)OC(=O)[n:13]1[c:12]2[cH:11][c:4]([N:5]3[CH2:6][CH2:7][O:8][CH2:9][CH2:10]3)[cH:3][c:2]([CH3:1])[c:33]2[n:32][c:14]1[C:15]1=[C:16]([NH:17][CH2:18][C@@H:19]([OH:20])[c:21]2[cH:22][cH:23][cH:24][c:25]([Cl:26])[cH:27]2)[CH2:28][N:29](S(=O)(=O)C(F)(F)F)[C:30]1=[O:31]>>[CH3:1][c:2]1[cH:3][c:4]([N:5]2[CH2:6][CH2:7][O:...
Cc1cc(N2CCOCC2)cc2c1nc(C1=C(NC[C@@H](O)c3cccc(Cl)c3)CN(S(=O)(=O)C(F)(F)F)C1=O)n2C(=O)OC(C)(C)C
Cc1cc(N2CCOCC2)cc2[nH]c(C3=C(NC[C@@H](O)c4cccc(Cl)c4)CNC3=O)nc12
null
C([O-])(O)=O.[Na+]
CN(C=O)C
Reduction
OtherReaction
2f11a948f4e357206835e0387eaef9d4eff33ee011003551d4339449b953a4e0
3c18ba9ff13d6939ae55af454539aa1d409cfd52b5cc70c0158f2cca2d3a298a
O=C1NCC(NCCc2ccccc2)=C1c1nc2ccc(N3CCOCC3)cc2[nH]1
C-C(-C)(-C)-O-C(=O)-[n;H0;D3;+0:1]1:[c:2](:[c:3]):[c:4](:[c:5]):[#7;a:6]:[c:7]:1-[C:8]1=[C:9](-[#7:10])-[C:11]-[N;H0;D3;+0:12](-S(=O)(=O)-C(-F)(-F)-F)-[C:13]-1=[O;D1;H0:14]>>[#7:10]-[C:9]1=[C:8](-[c:7]2:[#7;a:6]:[c:4](:[c:5]):[c:2](:[c:3]):[nH;D2;+0:1]:2)-[C:13](=[O;D1;H0:14])-[NH;D2;+0:12]-[C:11]-1
138.9
[{"value": 138.9, "product": "ClC=1C=C(C=CC1)[C@@H](CNC1=C(C(NC1)=O)C1=NC2=C(N1)C=C(C=C2C)N2CCOCC2)O", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
80
CELSIUS
2
HOUR
To a stirred solution of (S)-4-[2-(3-chloro-phenyl)-2-hydroxy-ethylamino]-3-(1-tert-butyloxycarbonyl-4-methyl-6-morpholin-4-yl-1H-benzoimidazol-2-yl)-1-trifluoromethanesulfonyl-1,5-dihydro-pyrrol-2-one (0.014 g, 0.020 mmol) in N,N-dimethylformamide (2 mL) was added saturated sodium bicarbonate (10 drops) and this was h...
10.6084/m9.figshare.5104873.v1
null
Tertiary halide.Tertiary halide.Tertiary halide.Ether.Tertiary amide.Boc
Secondary amide
c1ccc2nc[nH]c2c1.C1=CC[NH]C1
c1ccc2[nH]cnc2c1.C1=CCNC1
C1COCC[NH]1.c1ccc2[nH]cnc2c1.c1ccccc1.C1=CCNC1
HF
C([O-])(O)=O.[Na+].CN(C=O)C
80
2
Cc1cc(N2CCOCC2)cc2c1nc(C1=C(NC[C@@H](O)c3cccc(Cl)c3)CN(S(=O)(=O)C(F)(F)F)C1=O)n2C(=O)OC(C)(C)C>C([O-])(O)=O.[Na+].CN(C=O)C>Cc1cc(N2CCOCC2)cc2[nH]c(C3=C(NC[C@@H](O)c4cccc(Cl)c4)CNC3=O)nc12
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-07f9970c50e64af1ab131f98a6014d5c
C1COCCN1.O=C(O)c1cccc(O)c1>>C1COCC[NH2+]1.O=C([O-])c1cccc(O)c1
N1CCOCC1.OC=1C=C(C(=O)O)C=CC1.N1CCOCC1>>OC=1C=C(C(=O)[O-])C=CC1.[NH2+]1CCOCC1
[CH2:1]1[CH2:2][O:3][CH2:4][CH2:5][NH:6]1.[O:7]=[C:8]([OH:9])[c:10]1[cH:11][cH:12][cH:13][c:14]([OH:15])[cH:16]1>>[CH2:1]1[CH2:2][O:3][CH2:4][CH2:5][NH2+:6]1.[O:7]=[C:8]([O-:9])[c:10]1[cH:11][cH:12][cH:13][c:14]([OH:15])[cH:16]1
C1COCCN1.O=C(O)c1cccc(O)c1
C1COCC[NH2+]1.O=C([O-])c1cccc(O)c1
null
null
C(C)O
Functional Group Interconversion
OtherReaction
a814cc1a011593e2c68585e2731f099af1d517de1fcd3feca16c306f99ada8f5
02cc035f718d8b0360e817e412bd90c19b45bf9577e942246522aa40ca6fc5a8
C1COCC[NH2+]1.c1ccccc1
[#8:1]1-[C:2]-[C:3]-[NH;D2;+0:4]-[C:5]-[C:6]-1.[O;D1;H0:7]=[C:8](-[OH;D1;+0:9])-[c:10]>>[#8:1]1-[C:2]-[C:3]-[NH2+;D2:4]-[C:5]-[C:6]-1.[O-;H0;D1:9]-[C:8](=[O;D1;H0:7])-[c:10]
70
[{"value": 70.0, "product": "OC=1C=C(C(=O)[O-])C=CC1.[NH2+]1CCOCC1", "details": "PERCENTYIELD", "is_desired": false}]
null
null
null
null
In a conical flask, cold absolute ethanol (ca. 40 ml) was added to 99% pure 3-hydroxybenzoic acid (1.8495 g; 13.39 mmol). Dissolution of the acid was achieved at room temperature by constant stirring. Morpholine (1.1653 g, 13.39 mmol) was added dropwise to the acid solution. The reaction was exothermic and some white f...
10.6084/m9.figshare.5104873.v1
null
Carboxylic acid.Secondary amine
null
C1COCCN1
C1COCC[NH+]1
C1COCC[NH+]1.c1ccccc1
null
C(C)O
null
null
C1COCCN1.O=C(O)c1cccc(O)c1>C(C)O>C1COCC[NH2+]1.O=C([O-])c1cccc(O)c1
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-40e5334c84874430bb136034050caaff
COc1ccc(C(CC(N)=O)N2C(=O)c3cc4ccccc4cc3C2=O)cc1OC1CCCC1>>COc1ccc(C(CC(N)=O)N2C(=O)c3ccccc3C2=O)cc1OC1CCCC1
O=C1N(C(C=2C=C3C(=CC12)C=CC=C3)=O)C(CC(=O)N)C3=CC(=C(C=C3)OC)OC3CCCC3.C(CC)(=O)N.C(CC)(=O)N.O=C1N(C(C=2C=C3C(=CC12)C=CC=C3)=O)C(CC(=O)N)C3=CC(=C(C=C3)OC3CCCCC3)OCC.C(CC)(=O)N.O=C1N(C(C=2C=C3C(=CC12)C=CC=C3)=O)C(CC(=O)N)C3=CC(=C(C=C3)OC3CCCC3)OCC.C(CC)(=O)N.O=C1N(C(C=2C=C3C(=CC12)C=CC=C3)=O)C(CC(=O)N)C3=CC(=C(C=C3)OCC)O...
c1c2c(c[c:20]3[c:15]1[C:13](=[O:14])[N:12]([CH:7]([c:6]1[cH:5][cH:4][c:3]([O:2][CH3:1])[c:24]([O:25][CH:26]4[CH2:27][CH2:28][CH2:29][CH2:30]4)[cH:23]1)[CH2:8][C:9]([NH2:10])=[O:11])[C:21]3=[O:22])[cH:19][cH:18][cH:17][cH:16]2>>[CH3:1][O:2][c:3]1[cH:4][cH:5][c:6]([CH:7]([CH2:8][C:9]([NH2:10])=[O:11])[N:12]2[C:13](=[O:14...
COc1ccc(C(CC(N)=O)N2C(=O)c3cc4ccccc4cc3C2=O)cc1OC1CCCC1
COc1ccc(C(CC(N)=O)N2C(=O)c3ccccc3C2=O)cc1OC1CCCC1
null
null
null
Miscellaneous
OtherReaction
10fe611be61ee72097578a5d4ed1558302454ebef747e299e4f22b2923657470
56ebed4a8b3cebec83c37a71d68f0c87d1e404ab05a9ce792691e4e18a2379dd
O=C1c2ccccc2C(=O)N1Cc1cccc(OC2CCCC2)c1
[C:1]-[#7:2]1-[C:3](=[O;D1;H0:4])-[c;H0;D3;+0:5]2:c:c3:[cH;D2;+0:6]:[c:7]:[c:8]:[cH;D2;+0:9]:c:3:c:[c;H0;D3;+0:10]:2-[C:11]-1=[O;D1;H0:12]>>[C:1]-[#7:2]1-[C:3](=[O;D1;H0:4])-[c;H0;D3;+0:5]2:[cH;D2;+0:6]:[c:7]:[c:8]:[cH;D2;+0:9]:[c;H0;D3;+0:10]:2-[C:11]-1=[O;D1;H0:12]
null
[]
null
null
null
null
Similarly from equivalent amounts of 3-(1,3-dioxobenzo[f]isoindolin-2-yl)-3-(3-cyclopentyloxy-4-methoxyphenyl)propionic acid, 3-(1,3-dioxo-4-azaindolin-2-yl)-3-(3-cyclopentyloxy-4-methoxyphenyl)propionic acid, 3-(1,3-dioxo-5-azaindolin-2-yl)-3-(3-cyclopentyloxy-4-methoxyphenyl)propionic acid, 3-(1,3-dioxobenzo[f]isoind...
10.6084/m9.figshare.5104873.v1
null
null
null
c1ccc2cc3c(cc2c1)C[NH]C3
c1ccc2c(c1)C[NH]C2
c1ccccc1.c1ccc2c(c1)C[NH]C2.C1CCCC1
Other
null
null
null
COc1ccc(C(CC(N)=O)N2C(=O)c3cc4ccccc4cc3C2=O)cc1OC1CCCC1>>COc1ccc(C(CC(N)=O)N2C(=O)c3ccccc3C2=O)cc1OC1CCCC1
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-c42df188bae344b0b40a7326cdfc01b4
CCOc1cc(C(CC#N)N2C(=O)c3cc4ccccc4cc3C2=O)ccc1OC1CCCCC1.CCOc1ccc(C(CC#N)N2C(=O)c3cc4ccccc4cc3C2=O)cc1OC1CCCC1.COc1cc(C(CC#N)N2C(=O)c3cc4ccccc4cc3C2=O)ccc1OC1CCCCC1>>CCOc1ccc(C(CC#N)N2C(=O)c3ccccc3C2=O)cc1OCC
O=C1N(C(C=2C=C3C(=CC12)C=CC=C3)=O)C(CC#N)C3=CC(=C(C=C3)OC)OC3CCCC3.C(CC)#N.C(CC)#N.O=C1N(C(C=2C=C3C(=CC12)C=CC=C3)=O)C(CC#N)C3=CC(=C(C=C3)OC3CCCCC3)OCC.C(CC)#N.O=C1N(C(C=2C=C3C(=CC12)C=CC=C3)=O)C(CC#N)C3=CC(=C(C=C3)OC3CCCC3)OCC.C(CC)#N.O=C1N(C(C=2C=C3C(=CC12)C=CC=C3)=O)C(CC#N)C3=CC(=C(C=C3)OCC)OC3CCCC3.C(CC)#N.O=C1N(C(...
N#CCC(c1ccc(OC2CCCCC2)c(O[CH2:26][CH3:27])c1)N1C(=O)c2cc3ccccc3cc2C1=O.c1ccc2c(c1)c[c:20]1[c:15]([cH:16]2)[C:13](=[O:14])[N:12]([CH:8]([c:7]2[cH:6][cH:5][c:4]([O:3][CH2:2][CH3:1])[c:24]([O:25]C3CCCC3)[cH:23]2)[CH2:9][C:10]#[N:11])[C:21]1=[O:22].COc1cc(C(CC#N)N2C(=O)c3cc4c[cH:17][cH:18][cH:19]c4cc3C2=O)ccc1OC1CCCCC1>>[C...
CCOc1cc(C(CC#N)N2C(=O)c3cc4ccccc4cc3C2=O)ccc1OC1CCCCC1.CCOc1ccc(C(CC#N)N2C(=O)c3cc4ccccc4cc3C2=O)cc1OC1CCCC1.COc1cc(C(CC#N)N2C(=O)c3cc4ccccc4cc3C2=O)ccc1OC1CCCCC1
CCOc1ccc(C(CC#N)N2C(=O)c3ccccc3C2=O)cc1OCC
null
null
null
Heteroatom Alkylation and Arylation
OtherReaction
adaa67294eb78ea68a7fc4765fca71212b1bd5e899888e9a3e6d29f88097d446
84975d4bc70f363124ea54454eaaa83f471369b28468215e592bc4b99012ea98
O=C1c2ccccc2C(=O)N1Cc1ccccc1
C-O-c1:c:c(-C(-C-C#N)-N2-C(=O)-c3:c:c4:[cH;D2;+0:1]:[c:2]:[cH;D2;+0:3]:c:c:4:c:c:3-C-2=O):c:c:c:1-O-C1-C-C-C-C-C-1.N#C-C-C(-N1-C(=O)-c2:c:c3:c:c:c:c:c:3:c:c:2-C-1=O)-c1:c:c:c(-O-C2-C-C-C-C-C-2):c(-O-[CH2;D2;+0:4]-[C;D1;H3:5]):c:1.[C:6]-[#7:7]1-[C:8](=[O;D1;H0:9])-[c:10]2:[cH;D2;+0:11]:c3:c:c:c:c:c:3:c:[c;H0;D3;+0:12]:2...
null
[]
null
null
null
null
Similarly obtained from 3-(1,3-dioxobenzo[f] isoindolin-2-yl)-3-(3-cyclopentyloxy-4-methoxyphenyl)propionamide, 3-(1,3-dioxo-4-azaindolin-2-yl)-3-(3-cyclopentyloxy-4-methoxyphenyl)propionamide, 3-(1,3-dioxo-5-azaindolin-2-yl)-3-(3-cyclopentyloxy-4-methoxyphenyl)propionamide, 3-(1,3-dioxobenzo[f]isoindolin-2-yl)-3-(3-et...
10.6084/m9.figshare.5104873.v1
null
Ether.Ether.Ether.Ether.Ether.Substituted dicarboximide.Substituted dicarboximide.Nitrile.Nitrile
Ether
c1ccccc1.C1CCCCC1.c1ccc2cc3c(cc2c1)CNC3.c1ccc2cc3c(cc2c1)C[NH]C3.C1CCCC1.c1ccccc1.c1ccc2cc3c(cc2c1)CNC3.C1CCCCC1
c1ccc2c(c1)C[NH]C2
c1ccccc1.c1ccc2c(c1)C[NH]C2
HO-
null
null
null
CCOc1cc(C(CC#N)N2C(=O)c3cc4ccccc4cc3C2=O)ccc1OC1CCCCC1.CCOc1ccc(C(CC#N)N2C(=O)c3cc4ccccc4cc3C2=O)cc1OC1CCCC1.COc1cc(C(CC#N)N2C(=O)c3cc4ccccc4cc3C2=O)ccc1OC1CCCCC1>>CCOc1ccc(C(CC#N)N2C(=O)c3ccccc3C2=O)cc1OCC
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-09886d22a7e74f5ea13173d30ce9b9e8
COc1ccc(C(CC(N)=O)N2C(=O)c3ccccc3C2=O)cc1OC>>COc1ccc(C(CC#N)N2C(=O)c3ccccc3C2=O)cc1OC
C1(C=2C(C(N1C(CC(=O)N)C1=CC(=C(C=C1)OC)OC)=O)=CC=CC2)=O.CN1CCOCC1.S(=O)(Cl)Cl>>C1(C=2C(C(N1C(CC#N)C1=CC(=C(C=C1)OC)OC)=O)=CC=CC2)=O
O=[C:9]([CH2:8][CH:7]([c:6]1[cH:5][cH:4][c:3]([O:2][CH3:1])[c:23]([O:24][CH3:25])[cH:22]1)[N:11]1[C:12](=[O:13])[c:14]2[cH:15][cH:16][cH:17][cH:18][c:19]2[C:20]1=[O:21])[NH2:10]>>[CH3:1][O:2][c:3]1[cH:4][cH:5][c:6]([CH:7]([CH2:8][C:9]#[N:10])[N:11]2[C:12](=[O:13])[c:14]3[cH:15][cH:16][cH:17][cH:18][c:19]3[C:20]2=[O:21]...
COc1ccc(C(CC(N)=O)N2C(=O)c3ccccc3C2=O)cc1OC
COc1ccc(C(CC#N)N2C(=O)c3ccccc3C2=O)cc1OC
null
null
CN(C=O)C
Miscellaneous
OtherReaction
5094e9d814705bbdc421edbf7e9198e499e70e93916e2cec6eefbc82d1ba5440
32b9893bcb5223559a9d02852f8392cf6473aacfb044a52ba4e9cb9c29edb170
O=C1c2ccccc2C(=O)N1Cc1ccccc1
O=[C;H0;D3;+0:1](-[NH2;D1;+0:2])-[C:3]-[C:4]>>[C:4]-[C:3]-[C;H0;D2;+0:1]#[N;H0;D1;+0:2]
79
[{"value": 79.0, "product": "C1(C=2C(C(N1C(CC#N)C1=CC(=C(C=C1)OC)OC)=O)=CC=CC2)=O", "details": "PERCENTYIELD", "is_desired": false}, {"value": 78.5, "product": "C1(C=2C(C(N1C(CC#N)C1=CC(=C(C=C1)OC)OC)=O)=CC=CC2)=O", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
30
MINUTE
To an ice bath cooled stirred suspension of 3-phthalimido-3-(3,4-dimethoxyphenyl)propionamide (1.77 g, 5.00 mmol) and 4-methylmorpholine (1.3 mL, 12 mmol) in dimethyformamide (17 mL) under nitrogen, was added thionyl chloride (0.7 mL, 9.6 mmol) dropwise via a syringe. There was a slight exotherm and after 30 minutes, t...
10.6084/m9.figshare.5104873.v1
null
Primary amide
Nitrile
null
null
c1ccccc1.c1ccc2c(c1)C[NH]C2
HO-
CN(C=O)C
null
0.5
COc1ccc(C(CC(N)=O)N2C(=O)c3ccccc3C2=O)cc1OC>CN(C=O)C>COc1ccc(C(CC#N)N2C(=O)c3ccccc3C2=O)cc1OC
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-5592d5b86ad447fe92d882c35b63be43
NC(CC(=O)O)c1ccccc1.O=C1OC(=O)[C@@H]2CCCC[C@H]12>>O=C(O)CC(c1ccccc1)N1C(=O)[C@H]2CCCC[C@H]2C1=O
NC(CC(=O)O)C1=CC=CC=C1.[C@@H]12[C@@H](CCCC1)C(=O)OC2=O>>C1([C@H]2[C@@H](C(N1C(CC(=O)O)C1=CC=CC=C1)=O)CCCC2)=O
[O:1]=[C:2]([OH:3])[CH2:4][CH:5]([c:6]1[cH:7][cH:8][cH:9][cH:10][cH:11]1)[NH2:12].O1[C:13](=[O:14])[C@@H:15]2[CH2:16][CH2:17][CH2:18][CH2:19][C@@H:20]2[C:21]1=[O:22]>>[O:1]=[C:2]([OH:3])[CH2:4][CH:5]([c:6]1[cH:7][cH:8][cH:9][cH:10][cH:11]1)[N:12]1[C:13](=[O:14])[C@H:15]2[CH2:16][CH2:17][CH2:18][CH2:19][C@H:20]2[C:21]1=...
NC(CC(=O)O)c1ccccc1.O=C1OC(=O)[C@@H]2CCCC[C@H]12
O=C(O)CC(c1ccccc1)N1C(=O)[C@H]2CCCC[C@H]2C1=O
null
null
C(C)(=O)O
Acylation
OtherReaction
e31ab6bc2910da58d432cb5913ab0c5fdac34539ca9cc021c162ad6628b3e161
2a4a20e639c386292668b0b265a8e1b50d707d5f0576437dc5ade3e7fd444d29
O=C1[C@H]2CCCC[C@H]2C(=O)N1Cc1ccccc1
[C:1]-[C:2]1-[C:3](-[C:4])-[C;H0;D3;+0:5](=[O;D1;H0:6])-O-[C;H0;D3;+0:7]-1=[O;D1;H0:8].[NH2;D1;+0:9]-[C:10](-[c:11])-[C:12]-[C:13](=[O;D1;H0:14])-[O;D1;H1:15]>>[C:1]-[C:2]1-[C:3](-[C:4])-[C;H0;D3;+0:5](=[O;D1;H0:6])-[N;H0;D3;+0:9](-[C:10](-[c:11])-[C:12]-[C:13](=[O;D1;H0:14])-[O;D1;H1:15])-[C;H0;D3;+0:7]-1=[O;D1;H0:8]
58
[{"value": 58.0, "product": "C1([C@H]2[C@@H](C(N1C(CC(=O)O)C1=CC=CC=C1)=O)CCCC2)=O", "details": "PERCENTYIELD", "is_desired": false}]
null
null
null
null
A stirred mixture 3-amino-3-phenylpropionic acid and cis-1,2-cyclohexanedicarboxylic anhydride in 10 mL of acetic acid under nitrogen was heated to reflux for 4 h and then allowed to cool to room temperature. The resulting mixture was concentrated to an orange yellow oil. This oil was crystallized from a 1/1 mixture of...
10.6084/m9.figshare.5104873.v1
null
Anhydride.Primary amine
Substituted dicarboximide
C1CC[C@H]2COC[C@H]2C1
C1CC[C@H]2C[NH]C[C@H]2C1
c1ccccc1.C1CC[C@H]2C[NH]C[C@H]2C1
HO-
C(C)(=O)O
null
null
NC(CC(=O)O)c1ccccc1.O=C1OC(=O)[C@@H]2CCCC[C@H]12>C(C)(=O)O>O=C(O)CC(c1ccccc1)N1C(=O)[C@H]2CCCC[C@H]2C1=O
ord_dataset-c3a75813d0b24864aa4f7cd526efd6aa
ord-9086107146894d009a71b526bc30e351
O=C(O)CC(c1ccccc1)N1C(=O)[C@H]2CCCC[C@H]2C1=O.[NH4+]>>NC(=O)CC(c1ccccc1)N1C(=O)[C@H]2CCCC[C@H]2C1=O
C1([C@H]2[C@@H](C(N1C(CC(=O)O)C1=CC=CC=C1)=O)CCCC2)=O.C(=O)(N1C=NC=C1)N1C=NC=C1.[OH-].[NH4+]>>C1([C@H]2[C@@H](C(N1C(CC(=O)N)C1=CC=CC=C1)=O)CCCC2)=O
O[C:2](=[O:3])[CH2:4][CH:5]([c:6]1[cH:7][cH:8][cH:9][cH:10][cH:11]1)[N:12]1[C:13](=[O:14])[C@H:15]2[CH2:16][CH2:17][CH2:18][CH2:19][C@H:20]2[C:21]1=[O:22].[NH4+:1]>>[NH2:1][C:2](=[O:3])[CH2:4][CH:5]([c:6]1[cH:7][cH:8][cH:9][cH:10][cH:11]1)[N:12]1[C:13](=[O:14])[C@H:15]2[CH2:16][CH2:17][CH2:18][CH2:19][C@H:20]2[C:21]1=[...
O=C(O)CC(c1ccccc1)N1C(=O)[C@H]2CCCC[C@H]2C1=O.[NH4+]
NC(=O)CC(c1ccccc1)N1C(=O)[C@H]2CCCC[C@H]2C1=O
null
null
O1CCCC1
Acylation
Carboxylic acid to amide conversion
1283aef55d7ee699f097a8e5267689198c76ba671644401547f902657820236d
cb0a71c3fb37a76e96fbd81aae6f95a28398a03d1ad2c8e877085e735efb98f1
O=C1[C@H]2CCCC[C@H]2C(=O)N1Cc1ccccc1
O-[C;H0;D3;+0:1](=[O;D1;H0:2])-[C:3]-[C:4].[NH4+;D0:5]>>[C:4]-[C:3]-[C;H0;D3;+0:1](-[NH2;D1;+0:5])=[O;D1;H0:2]
23.3
[{"value": 23.3, "product": "C1([C@H]2[C@@H](C(N1C(CC(=O)N)C1=CC=CC=C1)=O)CCCC2)=O", "details": "CALCULATEDPERCENTYIELD", "is_desired": false}]
null
null
1
HOUR
A mixture of 3-(cis-hexahydrophthalimido)-3-phenylpropionic acid (0.903 g, 3.00 mmol) and carbonyldiimidazole (0.525 g, 3.75 mmol) in 13 mL of anhydrous tetrahydrofuran under nitrogen was stirred for 1 hour, then 0.25 mL of concentrated ammonium hydroxide was added to the reaction solution. After 20 minutes, the reacti...
10.6084/m9.figshare.5104873.v1
null
Carboxylic acid
Primary amide
null
null
c1ccccc1.C1CC[C@H]2C[NH]C[C@H]2C1
HO-
O1CCCC1
null
1
O=C(O)CC(c1ccccc1)N1C(=O)[C@H]2CCCC[C@H]2C1=O.[NH4+]>O1CCCC1>NC(=O)CC(c1ccccc1)N1C(=O)[C@H]2CCCC[C@H]2C1=O