| # Release 0.32.5 | |
| * TileDB-Py 0.32.5 includes TileDB Embedded [2.26.2](https://github.com/TileDB-Inc/TileDB/releases/tag/2.26.2) | |
| ## Improvements | |
| * Fix GroupMetadata backwards compatibility by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2102 | |
| * Fix typo in API doc for create_bucket by @nickvigilante in https://github.com/TileDB-Inc/TileDB-Py/pull/2101 | |
| * Update enumerations exception message by @shaunrd0 in https://github.com/TileDB-Inc/TileDB-Py/pull/2096 | |
| * Handle removal of 'StorageManager' from stats dumps in 2.27 - Part 2 by @kounelisagis https://github.com/TileDB-Inc/TileDB-Py/pull/2098 | |
| ## Build system changes | |
| * Revert "Do not run CI in PR twice (#2082)" by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2100 | |
| # Release 0.32.4 | |
| TileDB-Py 0.32.4 was inadvertently released against TileDB [2.26.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.26.1). This will be corrected in 0.32.5, but the version delta does not justify yanking 0.32.4 | |
| ## Improvements | |
| * Add `TILEDB_DATETIME_DAY` type support for Arrow by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2002 | |
| * Extend the `GroupMetadata` functionality to support NumPy arrays by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2085 | |
| * Add extra argument to Group::add_member by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2093 | |
| * Handle removal of 'StorageManager' from stats dumps in 2.27 by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2088 | |
| * Make default value for `vfs.s3.region` in test conditional by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2086 | |
| * Make error message for non-existing `Enumeration` in test conditional by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2087 | |
| * Fix randomly failing test `DenseArrayTest::test_open_with_timestamp[False]` by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2090 | |
| * Fix skipif condition for test_cloud by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2084 | |
| * Raise error when sparse=True is passed to `tiledb.from_numpy` by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2080 | |
| * Documentation and CI updates by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2078 | |
| * Move `DenseArrayImpl` to pure Python by @kounelisagis and @nguyenv in https://github.com/TileDB-Inc/TileDB-Py/pull/2071 | |
| * Move `PackedBuffer` and `pack_metadata_val` to pure Python, and wrap `tiledb_datatype_size` with pybind by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2072 | |
| * Move `SparseArrayImpl` to pure Python by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2065 | |
| ## Build system changes | |
| * Add CI to test against the TileDB core library built from source with a custom version by @dudoslav and @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2091 | |
| * Do not run CI in PR twice by @dudoslav in https://github.com/TileDB-Inc/TileDB-Py/pull/2082 | |
| * Disable release for Python 3.8 by @dudoslav in https://github.com/TileDB-Inc/TileDB-Py/pull/2081 | |
| * Re-enable automatic upload to pypi by @dudoslav and @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2034 | |
| * Drop Python 3.8 support by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2079 | |
| # Release 0.32.3 | |
| * TileDB-Py 0.32.3 includes TileDB Embedded [2.26.2](https://github.com/TileDB-Inc/TileDB/releases/tag/2.26.2) | |
| ## Build system changes | |
| * Override tag version in manylinux container by @dudoslav in https://github.com/TileDB-Inc/TileDB-Py/pull/2077 | |
| # Release 0.32.2 | |
| ## Improvements | |
| * Fix object_type return value by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2073 | |
| # Release 0.32.1 | |
| * TileDB-Py 0.32.1 includes TileDB Embedded [2.26.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.26.1) | |
| ## Improvements | |
| * Move vacuum to pure Python by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2067 | |
| * Make dump calls conditional by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2062 | |
| ## Build system changes | |
| * Bump libtiledb version to 2.26.0 for daily tests by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2063 | |
| # Release 0.32.0 | |
| * TileDB-Py 0.32.0 includes TileDB Embedded [2.26.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.26.0) | |
| ## Improvements | |
| * Replace dump() calls with operator<< by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1975 | |
| * Convert config values to strings in VFS init by @gspowley and @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2060 | |
| * Move DomainIndexer, Stats, and Array helper functions from Cython to pybind by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2057 | |
| * Refactor Aggregation from Cython to Pure Python by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2056 | |
| * Move tiledb_object_* API calls from Cython to pybind by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2049 | |
| * Don't check dtype if column_types is not set - from_pandas by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2055 | |
| * Fix serialization test and add command line option by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2052 | |
| * Remove deprecations by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2050 | |
| * Make from_pandas respect column_types for index dimensions by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2046 | |
| * Remove Dask test skips and add Dask as a test dependency by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2047 | |
| * Fix exception when calling label_index on a Query object by @sric0880 and @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2044 | |
| * Improve Query Condition error messages to align with TileDB-SOMA-Py by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2041 | |
| * Fix numpy.ma.fix_invalid issue in NumPy 2.1.0 by replacing with numpy.ma.masked_invalid by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2042 | |
| * Add scope_ctx to doc build by @spencerseale in https://github.com/TileDB-Inc/TileDB-Py/pull/2038 | |
| * Passing Empty List to multirange_index and df should return Empty Results by @nguyenv and @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1412 | |
| * Get rid all BNF lines in QueryCondition docstring by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2028 | |
| * Add tiledb_current_domain_t as type by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2033 | |
| * Add Enumeration in api ref docs by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2026 | |
| * Hide sensitive params shown in Config::__repr__ by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2029 | |
| * Wrap current domain API by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2015 | |
| ## Build system changes | |
| * Bump libtiledb and numpy versions for daily tests / make CurrentDomain and NDRectangle code conditional by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2036 | |
| * Fix compilation warnings by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1940 | |
| * Add packaging as dependency by @dudoslav in https://github.com/TileDB-Inc/TileDB-Py/pull/2032 | |
| * Expose setup.py flag to enable deprecations by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2025 | |
| * Update Cython minimum version to 3 by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2027 | |
| # Release 0.31.1 | |
| ## Improvements | |
| * Fix malformed doc str for tiledb.array_schema.ArraySchema by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2007 | |
| * Fix deprecation and test by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2021 | |
| ## Build system changes | |
| * Add pandas dependency to test group by @dudoslav and @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2022 | |
| * Define TILEDB_REMOVE_DEPRECATIONS macro for cc and remove deprecated code by @kounelisagis and @dudoslav in https://github.com/TileDB-Inc/TileDB-Py/pull/2023 | |
| # Release 0.31.0 | |
| * TileDB-Py 0.31.0 includes TileDB Embedded [2.25.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.25.0) | |
| ## Improvements | |
| * Remove deprecated Array.delete_fragments code path by @teo-tsirpanis and @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2009 | |
| * Fix a typo in an error message by @johnkerl in https://github.com/TileDB-Inc/TileDB-Py/pull/2004 | |
| * Support ctx argument in array_exists by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2003 | |
| * Move fragment list consolidation API to pybind by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1999 | |
| ## Build system changes | |
| * Add version pins for pandas 3.0 by @kounelisagis https://github.com/TileDB-Inc/TileDB-Py/pull/2016 | |
| * Scikit-build-core build system rework by @dudoslav and @ihnorton in https://github.com/TileDB-Inc/TileDB-Py/pull/1988 | |
| * Patches for the build system by @dudoslav, @ihnorton and @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2010, https://github.com/TileDB-Inc/TileDB-Py/pull/2011, https://github.com/TileDB-Inc/TileDB-Py/pull/2013, https://github.com/TileDB-Inc/TileDB-Py/pull/2014, https://github.com/TileDB-Inc/TileDB-Py/pull/2018, https://github.com/TileDB-Inc/TileDB-Py/pull/2019, https://github.com/TileDB-Inc/TileDB-Py/pull/2020 | |
| # Release 0.30.2 | |
| ## Packaging Notes | |
| While we currently plan to maintain support for CentOS 7-compatible systems (GLIBC 2.17) through TileDB 2.31, ecosystem and infrastructure updates following the CentOS 7 end-of-life on 30/Jun/2024 may necessitate dropping support earlier. Please contact us if you still use a CentOS 7 (GLIBC 2.17)-like Linux distribution. | |
| ## Improvements | |
| * Fix OverflowError: Python int too large to convert to C long by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/2000 | |
| * Wrap as_built function by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1994 | |
| * Fix array.query() incorrectly handling nullables by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1998 | |
| * Add offending column when from_pandas -> _get_column_infos fails by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1997 | |
| # Release 0.30.1 | |
| * TileDB-Py 0.30.1 includes TileDB Embedded [2.24.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.24.1) | |
| ## Improvements | |
| * Document Azure, GCS and local support for VFS.ls_recursive by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1980 | |
| * Skip Dask failing test on Windows by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1995 | |
| # Release 0.30.0 | |
| * TileDB-Py 0.30.0 includes TileDB Embedded [2.24.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.24.0) | |
| ## Improvements | |
| * Add test for blob attribute by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1985 | |
| * Deprecate support for [] indexing with floats by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1982 | |
| * Fix Query constructor to return error for dense arrays with return_incomplete=True by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1976 | |
| * Expose WebP enums by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1974 | |
| * Add Array.query in docs and improve docs in general by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1965 | |
| * Add support for creating WKB/WKT attributes by @jp-dark in https://github.com/TileDB-Inc/TileDB-Py/pull/1912 | |
| * Add wrapping for ls recursive by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1968 | |
| * Fix compatibility for delete_fragments by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1966 | |
| ## Build system changes | |
| * Fix pinning wrong numpy version by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1989 | |
| * Remove pin to MSVC toolset version in CI by @teo-tsirpanis in https://github.com/TileDB-Inc/TileDB-Py/pull/1991 | |
| * Fix ModuleNotFoundError: No module named 'numpy' on build by @kounelisagis and @ihnorton in https://github.com/TileDB-Inc/TileDB-Py/pull/1979 | |
| * Add support for numpy2 by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1969 | |
| * Fix syntax error in nightly build workflow by @ihnorton in https://github.com/TileDB-Inc/TileDB-Py/pull/1970 | |
| * Set an upper bound for numpy to dodge 2.0 by @sgillies in https://github.com/TileDB-Inc/TileDB-Py/pull/1963 | |
| # Release 0.29.1 | |
| ## Build system changes | |
| * Add numpy upper bound to dodge 2.0 by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1993 | |
| # Release 0.29.0 | |
| * TileDB-Py 0.29.0 includes TileDB Embedded [2.23.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.23.0) | |
| ## Improvements | |
| * Add wrapping for ls_recursive by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1933 | |
| * Migrate away from deprecated TileDB C++ APIs by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1958 | |
| * Pybind11 Config should honor prefix for iter by @Shelnutt2 in https://github.com/TileDB-Inc/TileDB-Py/pull/1962 | |
| * Fix test skipping by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1957 | |
| * Make timestamp overrides optional in tests and add faketime test by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1953 | |
| * Wrap tiledb_array_consolidate_fragments from pybind11 by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1948 | |
| ## Build system changes | |
| * Enable python 3.12 by @dudoslav in https://github.com/TileDB-Inc/TileDB-Py/pull/1959 | |
| * Add .vscode to .gitignore by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1952 | |
| # Release 0.28.0 | |
| ## TileDB Embedded updates | |
| * TileDB-Py 0.28.0 includes TileDB Embedded [2.22.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.22.0) | |
| ## Improvements | |
| * Update type signature for VFS::readinto by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1937 | |
| * Show enumerated value-types in enum-printer by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1936 | |
| * Add wrapping for new consolidation plan API by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1935 | |
| * Add test for Group constructor invalid uri object type by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1941 | |
| * Update doc for tiledb.consolidate by @ihnorton in https://github.com/TileDB-Inc/TileDB-Py/pull/1946 | |
| * Improve documentation of from_numpy function by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1942 | |
| ## Build system changes | |
| * Exclude .pytest_cache and .hypothesis files by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1932 | |
| * Remove modular building option by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1938 | |
| * Fix wrong version number for Python API docs by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1947 | |
| * Remove conditional code for TileDB < 2.16 by @kounelisagis in https://github.com/TileDB-Inc/TileDB-Py/pull/1949 | |
| * Update nightly test target to 2.21 by @ihnorton in https://github.com/TileDB-Inc/TileDB-Py/pull/1950 | |
| # Release 0.27.1 | |
| ## TileDB Embedded updates | |
| * TileDB-Py 0.27.1 includes TileDB Embedded [2.21.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.21.1) | |
| ## Improvements | |
| * Add tests to ensure empty result on query condition for invalid enum. [1882](https://github.com/TileDB-Inc/TileDB-Py/pull/1882) | |
| # Release 0.27.0 | |
| * TileDB-Py 0.27.0 includes TileDB Embedded [2.21.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.21.0) | |
| # Release 0.26.4 | |
| ## Bug Fixes | |
| * Fix VFS `read`, `seek` with numpy integer sizes. [#1927](https://github.com/TileDB-Inc/TileDB-Py/pull/1927) | |
| * Remove erroneous `_ctx` check for GroupMetadata [#1925](https://github.com/TileDB-Inc/TileDB-Py/pull/1925) | |
| # Release 0.26.3 | |
| ## Improvements | |
| * Fix vfs readinto when buff is not bytes. [#1915](https://github.com/TileDB-Inc/TileDB-Py/pull/1915) | |
| * Update daily test builds to use single source of truth for libtiledb target versions. [1910](https://github.com/TileDB-Inc/TileDB-Py/pull/1910) | |
| * Remove Python 3.7 CI jobs. [1916](https://github.com/TileDB-Inc/TileDB-Py/pull/1916) | |
| # Release 0.26.2 | |
| ## Improvements | |
| * Added API support for TileDB aggregates. [#1889](https://github.com/TileDB-Inc/TileDB-Py/pull/1889) | |
| * For compatibility with fsspec and rasterio, `isdir()`, `isfile()`, and `size()` aliases have been added to the `VFS` class. [#1902](https://github.com/TileDB-Inc/TileDB-Py/pull/1902). | |
| # Release 0.26.1 | |
| * TileDB-Py 0.26.1 includes TileDB Embedded [2.20.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.20.1) | |
| # Release 0.26.0 | |
| * TileDB-Py 0.26.0 includes TileDB Embedded [2.20.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.20.0) | |
| ## Bug Fixes | |
| * Add safe `Group.__repr__` [#1890](https://github.com/TileDB-Inc/TileDB-Py/pull/1890) | |
| * Use safe repr if ArraySchema was not properly constructed [#1896](https://github.com/TileDB-Inc/TileDB-Py/pull/1896) | |
| ## Improvements | |
| * Warn when `os.fork()` is used in the presence of a Tiledb context [#1876](https://github.com/TileDB-Inc/TileDB-Py/pull/1876/files). | |
| * Enable GCS in osx-arm64 wheel builds [#1899](https://github.com/TileDB-Inc/TileDB-Py/pull/1899) | |
| # Release 0.25.0 | |
| * TileDB-Py 0.25.0 includes TileDB Embedded [2.19.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.19.0) | |
| ## Improvements | |
| * Fix fill value for complex attributes [1872](https://github.com/TileDB-Inc/TileDB-Py/pull/1872) | |
| * Update current-release nightly target [1873](https://github.com/TileDB-Inc/TileDB-Py/pull/1873) | |
| * Add full check of attribute properties in __eq__ method [1874](https://github.com/TileDB-Inc/TileDB-Py/pull/1874) | |
| * Add all array properties to ArraySchema.__eq__ [1875](https://github.com/TileDB-Inc/TileDB-Py/pull/1875) | |
| * Error out if query condition given empty set [1877](https://github.com/TileDB-Inc/TileDB-Py/pull/1877) | |
| # Release 0.24.0 | |
| * TileDB-Py 0.24.0 includes TileDB Embedded [2.18.2](https://github.com/TileDB-Inc/TileDB/releases/tag/2.18.2) | |
| ## Improvements | |
| * Release the GIL while consolidation. [#1865](https://github.com/TileDB-Inc/TileDB-Py/pull/1864) | |
| * Add Group Metadata Consolidation and Vacuuming. [#1833](https://github.com/TileDB-Inc/TileDB-Py/pull/1833) | |
| * Fix domain equality check. [#1866](https://github.com/TileDB-Inc/TileDB-Py/pull/1866) | |
| * Fix reading DeltaFilter and DoubleDeltaFilter options for FilterList. [#1862](https://github.com/TileDB-Inc/TileDB-Py/pull/1862) | |
| * Do not flush VFS handles on closing. [#1863](https://github.com/TileDB-Inc/TileDB-Py/pull/1863) | |
| * Add context manager before enter `.array_exists`. [#1868](https://github.com/TileDB-Inc/TileDB-Py/pull/1868) (thanks, new contributor `p4perf4ce`!) | |
| # Release 0.23.4 | |
| * TileDB-Py 0.23.4 includes TileDB Embedded [2.17.4](https://github.com/TileDB-Inc/TileDB/releases/tag/2.17.4) | |
| ## Improvements | |
| * Add `COMPRESSION_REINTERPRET_DATATYPE` to allowed `FilterOption` [#1855](https://github.com/TileDB-Inc/TileDB-Py/pull/1855) | |
| * Add `filter_name` to `Filter` class [#1856](https://github.com/TileDB-Inc/TileDB-Py/pull/1856) | |
| ## Bug Fixes | |
| * Do not use `dtype.kind` in enumeration extend type checking [#1853](https://github.com/TileDB-Inc/TileDB-Py/pull/1853) | |
| * Empty enumerations should be casted to the dtype of the enumeration [#1854](https://github.com/TileDB-Inc/TileDB-Py/pull/1854) | |
| * Correct writing nullable string attributes and all nulled data [#1848](https://github.com/TileDB-Inc/TileDB-Py/pull/1848) | |
| * Pandas 2+ fix: use `pa.schema.with_metadata`, replacing passing metadata to `pa.schema` constructor [#1858](https://github.com/TileDB-Inc/TileDB-Py/pull/1858) | |
| # Release 0.23.3 | |
| ## Bug Fixes | |
| * Correct `Enumeration.extend` to handle integers, include Booleans, of different sizes [#1850](https://github.com/TileDB-Inc/TileDB-Py/pull/1850) | |
| # Release 0.23.2 | |
| * TileDB-Py 0.23.2 includes TileDB Embedded [2.17.3](https://github.com/TileDB-Inc/TileDB/releases/tag/2.17.3) | |
| ## Improvements | |
| * Add support for enumeration extension API. [#1847](https://github.com/TileDB-Inc/TileDB-Py/pull/1847) | |
| * Support new set membership query condition. [#1837](https://github.com/TileDB-Inc/TileDB-Py/pull/1837) | |
| * Create `ArraySchemaEvolution` for new operation. [#1839](https://github.com/TileDB-Inc/TileDB-Py/pull/1839) | |
| * Add sparse dimension label example. [#1843](https://github.com/TileDB-Inc/TileDB-Py/pull/1843) | |
| # Release 0.23.1 | |
| * TileDB-Py 0.23.1 includes TileDB Embedded [2.17.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.17.1) | |
| # Release 0.23.0 | |
| * TileDB-Py 0.23.0 includes TileDB Embedded [2.17.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.17.0) | |
| ## Improvements | |
| * Support for "enumerated datatypes" (aka categoricals or factors). [#1790](https://github.com/TileDB-Inc/TileDB-Py/pull/1790) | |
| * Introduce `Array.read_subarray` and `Array.write_subarray` APIs. [#1824](https://github.com/TileDB-Inc/TileDB-Py/pull/1824) | |
| * Avoid importing Pandas until we actually use it. [#1825](https://github.com/TileDB-Inc/TileDB-Py/pull/1825) | |
| * Make VFS accept path-like objects to refer to files. [#1818](https://github.com/TileDB-Inc/TileDB-Py/pull/1818) | |
| ## Bug Fixes | |
| * Use object equality check in buffer conversion, fixes state serialization bug in distributed use-case. [#1822](https://github.com/TileDB-Inc/TileDB-Py/pull/1822) | |
| # Release 0.22.3 | |
| * TileDB-Py 0.22.3 includes TileDB Embedded [2.16.3](https://github.com/TileDB-Inc/TileDB/releases/tag/2.16.3) | |
| ## Improvements | |
| * Wrap Delta filter. [#1710](https://github.com/TileDB-Inc/TileDB-Py/pull/1710) | |
| # Release 0.22.2 | |
| * TileDB-Py 0.22.2 includes TileDB Embedded [2.16.2](https://github.com/TileDB-Inc/TileDB/releases/tag/2.16.2) | |
| # Release 0.22.1 | |
| * TileDB-Py 0.22.1 includes TileDB Embedded [2.16.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.16.1) | |
| # Release 0.22.0 | |
| * TileDB-Py 0.22.0 includes TileDB Embedded [2.16.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.16.0) | |
| ## Improvements | |
| * Added support for variable-length dimension label reads [#1802](https://github.com/TileDB-Inc/TileDB-Py/pull/1802) | |
| ## Bug Fixes | |
| * Fix online help typo, and clarify. [#1803](https://github.com/TileDB-Inc/TileDB-Py/pull/1803) | |
| * Fix bad memory access for dimension label tile. [#1804](https://github.com/TileDB-Inc/TileDB-Py/pull/1804) | |
| # Release 0.21.6 | |
| ## Bug Fixes | |
| * Fix group.close to work on 2.16. [#1793](https://github.com/TileDB-Inc/TileDB-Py/pull/1793) | |
| * Fix sc-30787, VFS S3 write failure. [#1794](https://github.com/TileDB-Inc/TileDB-Py/pull/1794) | |
| # Release 0.21.5 | |
| ## TileDB Embedded updates | |
| * TileDB-Py 0.21.5 includes TileDB Embedded [2.15.4](https://github.com/TileDB-Inc/TileDB/releases/tag/2.15.4) | |
| ## Bug Fixes | |
| * Handle empty string passed to Query condition [#1774](https://github.com/TileDB-Inc/TileDB-Py/pull/1774) | |
| # Release 0.21.4 | |
| ## TileDB Embedded updates | |
| * TileDB-Py 0.21.4 includes TileDB Embedded [2.15.3](https://github.com/TileDB-Inc/TileDB/releases/tag/2.15.3) | |
| # Release 0.21.3 | |
| ## TileDB Embedded updates | |
| * TileDB-Py 0.21.3 includes TileDB Embedded [2.15.2](https://github.com/TileDB-Inc/TileDB/releases/tag/2.15.2) | |
| ## Improvements | |
| * Add support for Group.delete; fixes sc-28030. [#1754](https://github.com/TileDB-Inc/TileDB-Py/pull/1754) | |
| ## Bug Fixes | |
| * Fix sc-27374: default order mapping fallback. [#1736](https://github.com/TileDB-Inc/TileDB-Py/pull/1736) | |
| * Fix for array_exists hiding errors; fixes SC-27849. [#1754](https://github.com/TileDB-Inc/TileDB-Py/pull/1754) | |
| # Release 0.21.2 | |
| ## TileDB Embedded updates | |
| * TileDB-Py 0.21.2 includes TileDB Embedded [2.15.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.15.1) | |
| ## Improvements | |
| * Addition of `Group(config=...)` and `Group.set_config` [#1715](https://github.com/TileDB-Inc/TileDB-Py/pull/1715) | |
| # Release 0.21.1 | |
| *0.21.0 tag was invalid and thus deleted before PyPI release.* | |
| ## TileDB Embedded updates | |
| * TileDB-Py 0.21.0 includes TileDB Embedded [2.15.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.15.0) | |
| ## Improvements | |
| * Move `ArraySchema` from Cython to pure Python [#1340](https://github.com/TileDB-Inc/TileDB-Py/pull/1340) | |
| ## Bug Fixes | |
| * Correct `Attr.fill` for UTF-8 [#1594](https://github.com/TileDB-Inc/TileDB-Py/pull/1594) | |
| # Release 0.20.0 | |
| ## TileDB Embedded updates | |
| * TileDB-Py 0.20.0 includes TileDB Embedded [TileDB 2.14.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.14.0) | |
| ## Bug Fixes | |
| * Introduce safe repr for classes for `Filter`, `FilterList`, `Dim`, `Domain`, and `Attr`. [#1545](https://github.com/TileDB-Inc/TileDB-Py/pull/1545), [#1555](https://github.com/TileDB-Inc/TileDB-Py/pull/1555) | |
| # Release 0.19.1 | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.19.1 includes TileDB Embedded [TileDB 2.13.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.13.1) | |
| ## Improvements | |
| * Move `Dim` and `Domain` from Cython to pure Python [#1327](https://github.com/TileDB-Inc/TileDB-Py/pull/1327) | |
| ## Bug Fixes | |
| * Ensure NumPy array matches array schema dimensions for dense writes [#1514](https://github.com/TileDB-Inc/TileDB-Py/pull/1514) | |
| # Release 0.19.0 | |
| ## Packaging Notes | |
| * Added support for Python 3.11 | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.19.0 includes TileDB Embedded [TileDB 2.13.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.13.0) | |
| ## Deprecations | |
| * `FragmentInfoList.non_empty_domain` deprecated for `FragmentInfoList.nonempty_domain` | |
| * `FragmentInfoList.to_vacuum_num` deprecated for `len(FragmentInfoList.to_vacuum)` | |
| * `FragmentInfoList.to_vacuum_uri` deprecated for `FragmentInfoList.to_vacuum` | |
| * `FragmentInfoList.dense` deprecated for `not FragmentInfoList.dense` | |
| * `FragmentInfo.non_empty_domain` deprecated for `FragmentInfo.nonempty_domain` | |
| * `FragmentInfo.to_vacuum_num` deprecated for `len(FragmentInfo.to_vacuum)` | |
| * `FragmentInfo.to_vacuum_uri` deprecated for `FragmentInfo.to_vacuum` | |
| * `FragmentInfo.dense` deprecated for `not FragmentInfo.dense` | |
| * `FragmentsInfo` deprecated for `FragmentInfoList` | |
| * `tiledb.delete_fragments` deprecated for `Array.delete_fragments` | |
| * `Array.timestamp` deprecated for `Array.timestamp_range` | |
| * `Array.coords_dtype` deprecated with no replacement; combined coords have been removed from libtiledb | |
| * `Array.timestamp` deprecated for `Array.timestamp_range` | |
| * `Array.query(attr_cond=...)` deprecated for `Array.query(cond=...)` | |
| * `Array.query(cond=tiledb.QueryCondition('expression'))` deprecated for `Array.query(cond='expression')` | |
| ## API Changes | |
| * Add support for `WebpFilter` [#1395](https://github.com/TileDB-Inc/TileDB-Py/pull/1395) | |
| * Support Boolean types for query conditions [#1432](https://github.com/TileDB-Inc/TileDB-Py/pull/1432) | |
| * Support for partial consolidation using a list of fragment URIs [#1431](https://github.com/TileDB-Inc/TileDB-Py/pull/1431) | |
| * Addition of `ArraySchemaEvolution.timestamp` [#1480](https://github.com/TileDB-Inc/TileDB-Py/pull/1480) | |
| * Addition of `ArraySchema.has_dim` [#1430](https://github.com/TileDB-Inc/TileDB-Py/pull/1430) | |
| * Addition of `Array.delete_array` [#1428](https://github.com/TileDB-Inc/TileDB-Py/pull/1428) | |
| ## Bug Fixes | |
| * Fix issue where queries in delete mode error out on arrays with string dimensions [#1473](https://github.com/TileDB-Inc/TileDB-Py/pull/1473) | |
| * Fix representation of nullable integers in dataframe when using PyArrow path [#1439](https://github.com/TileDB-Inc/TileDB-Py/pull/1439) | |
| * Check for uninitialized query state after submit and error out if uninitialized [#1483](https://github.com/TileDB-Inc/TileDB-Py/pull/1483) | |
| # Release 0.18.3 | |
| ## Packaging Notes | |
| * Linux wheels now built on `manylinux2014`; previously built on `manylinux2010` | |
| * Windows wheels NOT AVAILABLE for this release | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.18.3 includes TileDB Embedded [TileDB 2.12.3](https://github.com/TileDB-Inc/TileDB/releases/tag/2.12.3) | |
| ## Improvements | |
| * Move `from_numpy` out of Cython into pure Python [#1436](https://github.com/TileDB-Inc/TileDB-Py/pull/1436) | |
| ## Bug Fixes | |
| * Fix `.df` and `.multi_index` always returning attributes applied in query conditions [#1433](https://github.com/TileDB-Inc/TileDB-Py/pull/1433) | |
| # Release 0.18.2 | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.18.2 includes TileDB Embedded [TileDB 2.12.2](https://github.com/TileDB-Inc/TileDB/releases/tag/2.12.2) | |
| # Release 0.18.1 | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.18.1 includes TileDB Embedded [TileDB 2.12.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.12.1) | |
| ## Improvements | |
| * Reintroduce moving `Attr` from Cython to pure Python [#1411](https://github.com/TileDB-Inc/TileDB-Py/pull/1411) | |
| ## Bug Fixes | |
| * Properly handle whitespaces in a query condition [#1398](https://github.com/TileDB-Inc/TileDB-Py/pull/1398) | |
| # Release 0.18.0 | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.18.0 includes TileDB Embedded [TileDB 2.12.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.12.0) | |
| ## API Changes | |
| * Changes to query conditions [#1341](https://github.com/TileDB-Inc/TileDB-Py/pull/1341) | |
| * Support query conditions on sparse dimensions | |
| * Deprecate `attr_cond` in favor of `cond` | |
| * Deprecate passing `tiledb.QueryCondition` to `cond` in favor of passing string directly | |
| * Add support for `XORFilter` [#1294](https://github.com/TileDB-Inc/TileDB-Py/pull/1294) | |
| * Addition of `Array.delete_fragments`; deprecate `tiledb.delete_fragments` [#1329](https://github.com/TileDB-Inc/TileDB-Py/pull/1329) | |
| * Array and Group metadata now store bytes as `TILEDB_BLOB` [#1384](https://github.com/TileDB-Inc/TileDB-Py/pull/1384) | |
| * Addition of `{Array,Group}.metadata.dump()` [#1384](https://github.com/TileDB-Inc/TileDB-Py/pull/1384) | |
| * Addition of `Group.is_relative` to check if the URI component of a group member is relative [#1386](https://github.com/TileDB-Inc/TileDB-Py/pull/1386) | |
| * Addition of query deletes to delete data that satisifies a given query condition [#1309](https://github.com/TileDB-Inc/TileDB-Py/pull/1309) | |
| * Addition of `FileIO.readinto` [#1389](https://github.com/TileDB-Inc/TileDB-Py/pull/1389) | |
| ## Improvements | |
| * Addition of Utility Function `get_last_ctx_err_str()` for C API [#1351](https://github.com/TileDB-Inc/TileDB-Py/pull/1351) | |
| * Move `Context` and `Config` from Cython to pure Python [#1379](https://github.com/TileDB-Inc/TileDB-Py/pull/1379) | |
| # TileDB-Py 0.17.6 Release Notes | |
| ## Bug Fixes | |
| * Correct writing empty/null strings to array. `tiledb.main.array_to_buffer` needs to resize data buffer at the end of `convert_unicode`; otherwise, last cell will be store with trailing nulls chars [#1339](https://github.com/TileDB-Inc/TileDB-Py/pull/1339) | |
| * Revert [#1326](https://github.com/TileDB-Inc/TileDB-Py/pull/1326) due to issues with `Context` lifetime with in multiprocess settings [#1372](https://github.com/TileDB-Inc/TileDB-Py/pull/1372) | |
| # TileDB-Py 0.17.5 Release Notes | |
| ## Improvements | |
| * Move `Attr` from Cython to pure Python [#1326](https://github.com/TileDB-Inc/TileDB-Py/pull/1326) | |
| * Move `Domain` and `Dim` from Cython to pure Python [#1327](https://github.com/TileDB-Inc/TileDB-Py/pull/1327) | |
| ## API Changes | |
| * Permit true-ASCII attributes in non-from-pandas dataframes [#1337](https://github.com/TileDB-Inc/TileDB-Py/pull/1337) | |
| * Addition of `Array.upgrade_version` to upgrade array to latest version [#1334](https://github.com/TileDB-Inc/TileDB-Py/pull/1334) | |
| * Attributes in query conditions no longer need to be passed to `Array.query`'s `attr` arg [#1333](https://github.com/TileDB-Inc/TileDB-Py/pull/1333) | |
| * `ArraySchemaEvolution` checks context's last error for error message [#1335](https://github.com/TileDB-Inc/TileDB-Py/pull/1335) | |
| # TileDB-Py 0.17.4 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.17.4 includes TileDB Embedded [TileDB 2.11.3](https://github.com/TileDB-Inc/TileDB/releases/tag/2.11.3) | |
| ## API Changes | |
| * Addition of `FloatScaleFilter` [#1195](https://github.com/TileDB-Inc/TileDB-Py/pull/1195) | |
| * Addition of `d` mode for arrays to delete data that satisfies a given query condition [#1309](https://github.com/TileDB-Inc/TileDB-Py/pull/1309) | |
| ## Misc Updates | |
| * Wheels are minimally supported for macOS 10.15 Catalina [#1275](https://github.com/TileDB-Inc/TileDB-Py/pull/1275) | |
| # TileDB-Py 0.17.3 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.17.3 includes TileDB Embedded [TileDB 2.11.2](https://github.com/TileDB-Inc/TileDB/releases/tag/2.11.2) | |
| ## API Changes | |
| * Add ability to pass shape tuple to empty_like [#1316](https://github.com/TileDB-Inc/TileDB-Py/pull/1316) | |
| * Support retrieving MBRs of var-sized dimensions [#1311](https://github.com/TileDB-Inc/TileDB-Py/pull/1311) | |
| ## Misc Updates | |
| * Wheels will no longer be supported for macOS 10.15 Catalina; the minimum supported macOS version is now 11 Big Sur [#1300](https://github.com/TileDB-Inc/TileDB-Py/pull/1300) | |
| * Wheels will no longer supported for Python 3.6 [#1300](https://github.com/TileDB-Inc/TileDB-Py/pull/1300) | |
| # TileDB-Py 0.17.2 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.17.2 includes TileDB Embedded [TileDB 2.11.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.11.1) | |
| ## Bug Fixes | |
| * Fix issue where querying an array with a Boolean type when `arrow=True`, but is unselected in `.query(attr=...)`, results in an error `pyarrow.lib.ArrowInvalid: Invalid column index to set field.` [#1291](https://github.com/TileDB-Inc/TileDB-Py/pull/1291) | |
| * Use Arrow type fixed-width binary ("w:") for non-variable TILEDB_CHAR [#1286](https://github.com/TileDB-Inc/TileDB-Py/pull/1286) | |
| # TileDB-Py 0.17.1 Release Notes | |
| ## API Changes | |
| * Support `datetime64` for `QueryCondition` [#1279](https://github.com/TileDB-Inc/TileDB-Py/pull/1279) | |
| # TileDB-Py 0.17.0 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.17.0 includes TileDB Embedded [TileDB 2.11.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.11.0) | |
| # TileDB-Py 0.16.5 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.16.5 includes TileDB Embedded [TileDB 2.10.4](https://github.com/TileDB-Inc/TileDB/releases/tag/2.10.4) | |
| # TileDB-Py 0.16.4 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.16.4 includes TileDB Embedded [TileDB 2.10.3](https://github.com/TileDB-Inc/TileDB/releases/tag/2.10.3) | |
| ## Improvements | |
| * `setup.py` revert back to retrieving core version by using `ctypes` by parsing `tiledb_version.h`; the tiledb shared object lib now returns back a full path [#1226](https://github.com/TileDB-Inc/TileDB-Py/pull/1226) | |
| * Update minimum required cmake version to =>3.23; required for building `libtiledb` [#1260](https://github.com/TileDB-Inc/TileDB-Py/pull/1260) | |
| ## API Changes | |
| * Addition of `in` operator for `QueryCondition` [#1214](https://github.com/TileDB-Inc/TileDB-Py/pull/1214) | |
| * Revert the regular indexer `[:]` to return entire array rather than nonempty domain in order to maintain NumPy semantics [#1261](https://github.com/TileDB-Inc/TileDB-Py/pull/1261) | |
| ## Bug Fixes | |
| * Deprecate `Filestore.import_uri` in lieu of `Filestore.copy_from` [#1226](https://github.com/TileDB-Inc/TileDB-Py/pull/1226) | |
| # TileDB-Py 0.16.3 Release Notes | |
| ## Packaging Notes | |
| * This removes `import tkinter` from `test_libtiledb.py` which was preventing the conda package from building properly | |
| # TileDB-Py 0.16.2 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.16.2 includes TileDB Embedded [TileDB 2.10.2](https://github.com/TileDB-Inc/TileDB/releases/tag/2.10.2) | |
| ## Improvements | |
| * `setup.py` retrieves core version by using `ctypes` to call `tiledb_version` rather than parsing `tiledb_version.h` [#1191](https://github.com/TileDB-Inc/TileDB-Py/pull/1191) | |
| ## Bug Fixes | |
| * Set nonempty domain to `(None, None)` for empty string [#1182](https://github.com/TileDB-Inc/TileDB-Py/pull/1182) | |
| ## API Changes | |
| * Support `QueryCondition` for dense arrays [#1198](https://github.com/TileDB-Inc/TileDB-Py/pull/1198) | |
| * Querying dense array with `[:]` returns shape that matches nonempty domain, consistent with `.df[:]` and `.multi_index[:]` [#1199](https://github.com/TileDB-Inc/TileDB-Py/pull/1199) | |
| * Addition of `from_numpy` support for `mode={ingest,schema_only,append}` [#1185](https://github.com/TileDB-Inc/TileDB-Py/pull/1185) | |
| # TileDB-Py 0.16.1 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.16.1 includes TileDB Embedded [TileDB 2.10.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.10.1) | |
| # TileDB-Py 0.16.0 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.16.0 includes TileDB Embedded [TileDB 2.10.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.10.0) | |
| ## API Changes | |
| * Addition of `Filestore` API [#1070](https://github.com/TileDB-Inc/TileDB-Py/pull/1070) | |
| * Use `bool` instead of `uint8` for Boolean dtype in `dataframe_.py` [#1154](https://github.com/TileDB-Inc/TileDB-Py/pull/1154) | |
| * Support `QueryCondition` OR operator [#1146](https://github.com/TileDB-Inc/TileDB-Py/pull/1146) | |
| # TileDB-Py 0.15.6 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.15.6 includes TileDB Embedded [TileDB 2.9.5](https://github.com/TileDB-Inc/TileDB/releases/tag/2.9.5) | |
| # TileDB-Py 0.15.5 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.15.5 includes TileDB Embedded [TileDB 2.9.4](https://github.com/TileDB-Inc/TileDB/releases/tag/2.9.4) | |
| ## API Changes | |
| * Support `TILEDB_BLOB` dtype [#1159](https://github.com/TileDB-Inc/TileDB-Py/pull/1159) | |
| ## Bug Fixes | |
| * Fix error where passing a `Context` to `Group` would segfault intermittenly [#1165](https://github.com/TileDB-Inc/TileDB-Py/pull/1165) | |
| * Correct Boolean values when `use_arrow=True` [#1167](https://github.com/TileDB-Inc/TileDB-Py/pull/1167) | |
| # TileDB-Py 0.15.4 Release Notes | |
| ## Packaging Notes | |
| * Due to a packaging error, the wheels for 0.15.4 should not be used. | |
| # TileDB-Py 0.15.3 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.15.3 includes TileDB Embedded [TileDB 2.9.3](https://github.com/TileDB-Inc/TileDB/releases/tag/2.9.3) | |
| # TileDB-Py 0.15.2 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.15.2 includes TileDB Embedded [TileDB 2.9.2](https://github.com/TileDB-Inc/TileDB/releases/tag/2.9.2) | |
| ## Improvements | |
| * Refactor `MultiRangeIndexer` & `DataFrameIndexer`: addition of ABC `_BaseIndexer` with virtual method `_run_query` and generator `_BaseIndexer.__iter__`; remove `_iter_state`; and fix bugs related to incomplete queries [#1134](https://github.com/TileDB-Inc/TileDB-Py/pull/1134) | |
| ## Bug Fixes | |
| * Fix race condition in `{Dense,Sparse}Array.__new__` [#1096](https://github.com/TileDB-Inc/TileDB-Py/pull/1096) | |
| * Correcting `stats_dump` issues: Python stats now also in JSON form if `json=True`, resolve name mangling of `json` argument and `json` module, and pulling "timer" and "counter" stats from `stats_json_core` for `libtiledb`>=2.3 [#1140](https://github.com/TileDB-Inc/TileDB-Py/pull/1140) | |
| ## API Changes | |
| * Addition of `tiledb.DictionaryFilter` [#1074](https://github.com/TileDB-Inc/TileDB-Py/pull/1074) | |
| * Add support for `Datatype::TILEDB_BOOL` [#1110](https://github.com/TileDB-Inc/TileDB-Py/pull/1110) | |
| * Addition of `Group.__contains__` to check if member with given name is in Group [#1125](https://github.com/TileDB-Inc/TileDB-Py/pull/1125) | |
| * Support with-statement for `Group`s [#1124](https://github.com/TileDB-Inc/TileDB-Py/pull/1124) | |
| * Addition of `keys`, `values`, and `items` to `Group.meta` [#1123](https://github.com/TileDB-Inc/TileDB-Py/pull/1123) | |
| * `Group.member` also returns name if given [#1141](https://github.com/TileDB-Inc/TileDB-Py/pull/1141) | |
| # TileDB-Py 0.15.1 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.15.1 includes TileDB Embedded [TileDB 2.9.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.9.1) | |
| # TileDB-Py 0.15.0 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.15.0 includes TileDB Embedded [TileDB 2.9.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.9.0) | |
| ## Misc Updates | |
| * Wheels will no longer be supported for macOS 10.14 Mojave; the minimum supported macOS version is now 10.15 Catalina [#1080](https://github.com/TileDB-Inc/TileDB-Py/pull/1080) | |
| # TileDB-Py 0.14.5 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.14.5 includes TileDB Embedded [TileDB 2.8.3](https://github.com/TileDB-Inc/TileDB/releases/tag/2.8.3) | |
| # TileDB-Py 0.14.4 Release Notes | |
| ## Misc Updates | |
| * Update `MACOSX_DEPLOYMENT_TARGET` from 10.14 to 10.15 [#1080](https://github.com/TileDB-Inc/TileDB-Py/pull/1080) | |
| ## Bug Fixes | |
| * Correct handling of Arrow cell count with all empty result [#1082](https://github.com/TileDB-Inc/TileDB-Py/pull/1082) | |
| # TileDB-Py 0.14.3 Release Notes | |
| ## Improvements | |
| * Refactor display of TileDB objects in Jupyter notebooks to be more readable [#1049](https://github.com/TileDB-Inc/TileDB-Py/pull/1049) | |
| * Improve documentation for `Filter`, `FilterList`, `VFS`, `FileIO`, `Group`, and `QueryCondition` [#1043](https://github.com/TileDB-Inc/TileDB-Py/pull/1043), [#1058](https://github.com/TileDB-Inc/TileDB-Py/pull/1058) | |
| ## Bug Fixes | |
| * `Dim.shape` correctly errors out if type is not integer or datetime [#1055](https://github.com/TileDB-Inc/TileDB-Py/pull/1055) | |
| * Correctly check dtypes in `from_pandas` for supported versions of NumPy <1.20 [#1054](https://github.com/TileDB-Inc/TileDB-Py/pull/1054) | |
| * Fix Arrow Table lifetime issues when using`.query(return_arrow=True)` [#1056](https://github.com/TileDB-Inc/TileDB-Py/pull/1056) | |
| # TileDB-Py 0.14.2 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.14.2 includes TileDB Embedded [TileDB 2.8.2](https://github.com/TileDB-Inc/TileDB/releases/tag/2.8.2) | |
| ## Improvements | |
| * Add `Group` and `Object` to docs [#1040](https://github.com/TileDB-Inc/TileDB-Py/pull/1040) | |
| ## Bug Fixes | |
| * Correct `Group.__repr__` to call correct `_dump` function [#1040](https://github.com/TileDB-Inc/TileDB-Py/pull/1040) | |
| * Check type of `ctx` in `from_pandas` and `from_csv` [#1042](https://github.com/TileDB-Inc/TileDB-Py/pull/1042) | |
| * Only allow use of `.df` indexer for `.query(return_arrow=True)`; error out with meaningful error message otherwise [#1045](https://github.com/TileDB-Inc/TileDB-Py/pull/1045) | |
| # TileDB-Py 0.14.1 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.14.1 includes TileDB Embedded [TileDB 2.8.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.8.1) | |
| # TileDB-Py 0.14.0 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.14.0 includes TileDB Embedded [TileDB 2.8.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.8.0) | |
| ## API Changes | |
| * Addition of `Group` and `Object` classes to support improved groups [#1022](https://github.com/TileDB-Inc/TileDB-Py/pull/1022) | |
| # TileDB-Py 0.13.3 Release Notes | |
| ## TileDB Embedded updates: | |
| * The Python 3.10 / manylinux2014 wheels for TileDB-Py 0.13.3 include TileDB Embedded [TileDB 2.7.2](https://github.com/TileDB-Inc/TileDB/releases/tag/2.7.2) built with GCS support | |
| ## Improvements | |
| * Move `VFS`, `FileIO`, and `FileHandle` classes from Cython to Pybind11 [#934](https://github.com/TileDB-Inc/TileDB-Py/pull/934) | |
| # TileDB-Py 0.13.2 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.13.2 includes TileDB Embedded [TileDB 2.7.2](https://github.com/TileDB-Inc/TileDB/releases/tag/2.7.2) | |
| ## Improvements | |
| * Move `FilterList` and `Filter` classes from Cython to Pybind11 [#921](https://github.com/TileDB-Inc/TileDB-Py/pull/921) | |
| ## Bug Fixes | |
| * Fix default validity for write to nullable attribute [#994](https://github.com/TileDB-Inc/TileDB-Py/pull/994) | |
| * Reduce query time for dense var-length arrays by including extra offset element in initial buffer allocation [#1005](https://github.com/TileDB-Inc/TileDB-Py/pull/1005) | |
| * Fix round-trippable repr for dimension tile [#998](https://github.com/TileDB-Inc/TileDB-Py/pull/998) | |
| ## API Changes | |
| * Addition of `ArraySchema.version` to get version of array schema [#949](https://github.com/TileDB-Inc/TileDB-Py/pull/949) | |
| * Deprecate `coords_filters` from `ArraySchema` [#993](https://github.com/TileDB-Inc/TileDB-Py/pull/993) | |
| * Allow setting `ascii` in `column_type` for `from_pandas`/`from_csv` [#999](https://github.com/TileDB-Inc/TileDB-Py/pull/999) | |
| # TileDB-Py 0.13.1 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.13.1 includes TileDB Embedded [TileDB 2.7.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.7.1) | |
| # TileDB-Py 0.13.0 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.13.0 includes TileDB Embedded [TileDB 2.7.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.7.0) | |
| ## API Changes | |
| * Deprecate partial vacuuming [#930](https://github.com/TileDB-Inc/TileDB-Py/pull/930) | |
| * Default `from_csv` to use `filter=ZstdFilter()` if not specified for `Attr` or `Dim` [#937](https://github.com/TileDB-Inc/TileDB-Py/pull/937) | |
| # TileDB-Py 0.12.4 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.12.4 includes TileDB Embedded [TileDB 2.6.4](https://github.com/TileDB-Inc/TileDB/releases/tag/2.6.4) | |
| # TileDB-Py 0.12.3 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.12.3 includes TileDB Embedded [TileDB 2.6.3](https://github.com/TileDB-Inc/TileDB/releases/tag/2.6.3) | |
| ## Bug Fixes | |
| * Properly initalize query in order to retrieve estimate results [#920](https://github.com/TileDB-Inc/TileDB-Py/pull/920) | |
| * Enable building with serialization disabled [#924](https://github.com/TileDB-Inc/TileDB-Py/pull/924) | |
| * Do not print out `FragmentInfo_frags` for `repr` [#925](https://github.com/TileDB-Inc/TileDB-Py/pull/925) | |
| * Error out with `IndexError` when attempting to use a step in the regular indexer [#911](https://github.com/TileDB-Inc/TileDB-Py/pull/911) | |
| # TileDB-Py 0.12.2 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.12.2 includes TileDB Embedded [TileDB 2.6.2](https://github.com/TileDB-Inc/TileDB/releases/tag/2.6.2) | |
| ## API Changes | |
| * Addition of `ArraySchema.validity_filters` [#898](https://github.com/TileDB-Inc/TileDB-Py/pull/898) | |
| # TileDB-Py 0.12.1 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.12.1 includes TileDB Embedded [TileDB 2.6.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.6.1) | |
| ## Bug fixes | |
| * Cast 'dim`'s dtype in `Domain` to `str` prior to applying `html.escape` [#883](https://github.com/TileDB-Inc/TileDB-Py/pull/883) | |
| * Support attributes with spaces in `QueryCondition` by casting with attr(); values may be casted with val() [#886](https://github.com/TileDB-Inc/TileDB-Py/pull/886) | |
| # TileDB-Py 0.12.0 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.12.0 includes TileDB Embedded [TileDB 2.6.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.6.0) | |
| ## API Changes | |
| * Allow writing to dimension-only array (zero attributes) by using assignment to `None`, for example: `A[coords] = None` (given `A: tiledb.Array`) [#854](https://github.com/TileDB-Inc/TileDB-Py/pull/854) | |
| * Remove repeating header names for `attr` when displaying `ArraySchema` in Jupyter Notebooks [#856](https://github.com/TileDB-Inc/TileDB-Py/pull/856) | |
| * `tiledb.VFS.open` returns `FileIO` object; no longer returns `FileHandle` [#802](https://github.com/TileDB-Inc/TileDB-Py/pull/802) | |
| * Addition of `tiledb.copy_fragments_to_existing_array` [#864](https://github.com/TileDB-Inc/TileDB-Py/pull/864) | |
| ## Bug fixes | |
| * HTML escape strings for `Dim` and `Attr`'s `name` and `dtype` [#856](https://github.com/TileDB-Inc/TileDB-Py/pull/856) | |
| * Fix attribute view for multi-indexer [#866](https://github.com/TileDB-Inc/TileDB-Py/pull/866) | |
| ## Improvements | |
| * Metadata-related API calls are now 'nogil' [#867](https://github.com/TileDB-Inc/TileDB-Py/pull/867) | |
| # TileDB-Py 0.11.5 Release Notes | |
| * Added missing dependency on [`packaging`](https://pypi.org/project/packaging/) in requirements.txt [#852](https://github.com/TileDB-Inc/TileDB-Py/pull/852) | |
| # TileDB-Py 0.11.4 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.11.4 includes TileDB Embedded [TileDB 2.5.3](https://github.com/TileDB-Inc/TileDB/releases/tag/2.5.3) | |
| ## API Changes | |
| * Add rich display for TileDB objects in Jupyter notebooks [#824](https://github.com/TileDB-Inc/TileDB-Py/pull/824) | |
| * Support `TILEDB_STRING_ASCII` for array metadata [#828](https://github.com/TileDB-Inc/TileDB-Py/pull/828) | |
| # TileDB-Py 0.11.3 Release Notes | |
| ## Impovements | |
| * Support for Python 3.10 [#808](https://github.com/TileDB-Inc/TileDB-Py/pull/808) | |
| ## API Changes | |
| * Addition of `tiledb.version()` to return version as a tuple [#801](https://github.com/TileDB-Inc/TileDB-Py/pull/801) | |
| * `Query.get_stats` and `Ctx.get_stats` changed function signature; automatically `print_out` stats and add option to output as `json` [#809](https://github.com/TileDB-Inc/TileDB-Py/pull/809) | |
| ## Bug fixes | |
| * `tiledb.delete_fragments` removes unused schemas [#813](https://github.com/TileDB-Inc/TileDB-Py/pull/813) | |
| # TileDB-Py 0.11.2 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.11.2 includes TileDB Embedded [TileDB 2.5.2](https://github.com/TileDB-Inc/TileDB/releases/tag/2.5.2) | |
| ## Bug fixes | |
| * Support dict parameter for 'config' argument to VFS constructor [#805](https://github.com/TileDB-Inc/TileDB-Py/pull/805) | |
| # TileDB-Py 0.11.1 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.11.1 includes TileDB Embedded [TileDB 2.5.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.5.1) | |
| ## Bug fixes | |
| * Support dict parameter for 'config' argument to VFS constructor [#805](https://github.com/TileDB-Inc/TileDB-Py/pull/805) | |
| * Correct libtiledb version checking for Fragment Info API getters' MBRs and array schema name [#784](https://github.com/TileDB-Inc/TileDB-Py/pull/784) | |
| # TileDB-Py 0.11.0 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.11.0 includes TileDB Embedded [TileDB 2.5.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.5.0) | |
| ## API Changes | |
| * Addition of MBRs to `FragmentInfo` API [#760](https://github.com/TileDB-Inc/TileDB-Py/pull/760) | |
| * Addition of `array_schema_name` to `FragmentInfo` API [#777](https://github.com/TileDB-Inc/TileDB-Py/pull/777) | |
| * Addition of `tiledb.create_array_from_fragments` to copy fragments within a given timestamp range to a new array [#777](https://github.com/TileDB-Inc/TileDB-Py/pull/777) | |
| # TileDB-Py 0.10.5 Release Notes | |
| ## API Changes | |
| * Addition of `tiledb.delete_fragments` to remove fragments within a given timestamp range [#774](https://github.com/TileDB-Inc/TileDB-Py/pull/774) | |
| # TileDB-Py 0.10.4 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.10.4 includes TileDB Embedded [TileDB 2.4.3](https://github.com/TileDB-Inc/TileDB/releases/tag/2.4.3) | |
| ## Bug fixes | |
| * Error out when applying `QueryCondition` to dense arrays; this feature will be implemented in TileDB Embedded 2.5 [#753](https://github.com/TileDB-Inc/TileDB-Py/pull/753) | |
| * Ensure that indexer, multi-indexer, and .df return the same results when applying `QueryCondition` [#753](https://github.com/TileDB-Inc/TileDB-Py/pull/753) | |
| * Fix error when using .df with PyArrow 6 due to incorrect metadata field in exported schema [#764](https://github.com/TileDB-Inc/TileDB-Py/pull/764) | |
| * Fix [#755](https://github.com/TileDB-Inc/TileDB-Py/issues/755): `from_pandas` to correctly round-trip unnamed Index [#761](https://github.com/TileDB-Inc/TileDB-Py/pull/761) | |
| * Fix .df indexer bug with empty result set [#744](https://github.com/TileDB-Inc/TileDB-Py/pull/744) | |
| ## API Changes | |
| * Close the `PyFragmentInfo` object in the `FragmentInfoList` constructor to reflect changes in the `FragmentInfo` API in TileDB Embedded 2.5 [#752](https://github.com/TileDB-Inc/TileDB-Py/pull/752) | |
| * Make `ctx` argument optional for `ArraySchemaEvolution` [#743](https://github.com/TileDB-Inc/TileDB-Py/pull/743) | |
| * Remove `coords_filters` from `ArraySchema` for dense arrays [#762](https://github.com/TileDB-Inc/TileDB-Py/pull/762) | |
| # TileDB-Py 0.10.3 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.10.3 includes TileDB Embedded [TileDB 2.4.2](https://github.com/TileDB-Inc/TileDB/releases/tag/2.4.2) | |
| - Note that 2.4.1 was skipped due to accidental tagging of the 2.4.1 git tag during CI testing | |
| ## API Changes | |
| * Addition of `overwrite` parameter to `Array.create` [#713](https://github.com/TileDB-Inc/TileDB-Py/pull/713) | |
| * Addition of `"ascii"` dtype for `Dim`s [#720](https://github.com/TileDB-Inc/TileDB-Py/pull/720) | |
| ## Bug fixes | |
| * Pass `Ctx` to `ArraySchema.load` in `from_pandas` [#709](https://github.com/TileDB-Inc/TileDB-Py/pull/709) | |
| * Give clear error message when attempting to apply `QueryCondition` on dimensions [#722](https://github.com/TileDB-Inc/TileDB-Py/pull/722) | |
| * Do not add string range when querying empty array [#721](https://github.com/TileDB-Inc/TileDB-Py/pull/721) | |
| ## Improvements | |
| * String dimension default fix in core [#2436](https://github.com/TileDB-Inc/TileDB/pull/2436) reverts a previous change in which the nonempty domain was passed the to multi-range indexer if unspecified [#712](https://github.com/TileDB-Inc/TileDB-Py/pull/712) | |
| # TileDB-Py 0.10.2 Release Notes | |
| ## API Changes | |
| * Deprecate sparse writes to dense arrays [#681](https://github.com/TileDB-Inc/TileDB-Py/pull/681) | |
| * Addition of `Attr.isascii` [#681](https://github.com/TileDB-Inc/TileDB-Py/pull/681) | |
| * Addition of `Ctx.get_stats` and `Query.get_stats` [#698](https://github.com/TileDB-Inc/TileDB-Py/pull/698) | |
| ## Improvements | |
| * Added support for `timestamp` argument in `tiledb.from_numpy` [#699](https://github.com/TileDB-Inc/TileDB-Py/pull/699) | |
| # TileDB-Py 0.10.1 Release Notes | |
| ## API Changes | |
| * Do not require `domain=(None, None)` for string dimensions [#662](https://github.com/TileDB-Inc/TileDB-Py/pull/662) | |
| ## Improvements | |
| * Print a warning about ContextVar bug when running under ipykernel < 6.0. [#665](https://github.com/TileDB-Inc/TileDB-Py/pull/665) | |
| Please see https://github.com/TileDB-Inc/TileDB-Py/issues/667 for more information. | |
| * `tiledb.Dim` representation now displays `var=True` for dimensions with `bytes` datatype, consistent with `tiledb.Attr` [#669](https://github.com/TileDB-Inc/TileDB-Py/pull/669) | |
| ## Bug fixes | |
| * Fix concurrent use of `Array.multi_index` and `.df` by using new instance for each invocation [#672](https://github.com/TileDB-Inc/TileDB-Py/pull/672) | |
| * For attributes, if `var=False` but the bytestring is fixed-width or if `var=True` but the bytestring is variable length, error out [#663](https://github.com/TileDB-Inc/TileDB-Py/pull/663) | |
| # TileDB-Py 0.10.0 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.10.0 includes TileDB Embedded [TileDB 2.4.0](https://github.com/TileDB-Inc/TileDB/releases/tag/2.4.0) with a number of | |
| new features and improvements, including: | |
| - new platform support: Apple M1 | |
| - support for ArraySchema evolution (adding and removing attributes) | |
| - support for Azure SAS (shared access signature) tokens | |
| ## API Changes | |
| * When using `Array.multi_index`, an empty result is returned if the nonempty domain is empty [#656](https://github.com/TileDB-Inc/TileDB-Py/pull/656) | |
| * Addition of `Array.set_query` to read array using a serialized query [#651](https://github.com/TileDB-Inc/TileDB-Py/pull/651) | |
| ## Improvements | |
| * Support numeric column names in `from_pandas` by casting to str dtype [#652](https://github.com/TileDB-Inc/TileDB-Py/pull/652) | |
| * New `tiledb.ArraySchemaEvolution` API to add and drop attributes from an existing array [#657](https://github.com/TileDB-Inc/TileDB-Py/pull/657) | |
| ## Bug Fixes | |
| * Correct listing of consolidated fragments to vacuum in the Fragment Info API by deprecating `FragmentInfoList.to_vacuum_uri`, `FragmentInfoList.to_vacuum_num`, `FragmentInfo.to_vacuum_uri`, and `FragmentInfo.to_vacuum_num` and replacing with `FragmentInfoList.to_vacuum` [#650](https://github.com/TileDB-Inc/TileDB-Py/pull/650) | |
| * Correct issue where appending `None` to `FilterList` causes segfault by checking the `filter` argument [#653](https://github.com/TileDB-Inc/TileDB-Py/pull/653) | |
| # TileDB-Py 0.9.5 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.9.5 includes TileDB Embedded [TileDB 2.3.3](https://github.com/TileDB-Inc/TileDB/releases/tag/2.3.3) | |
| ## Improvements | |
| * Consolidate `_nonempty_domain_var` into `nonempty_domain` [#632](https://github.com/TileDB-Inc/TileDB-Py/pull/632) | |
| * Support more valid Python syntax for `QueryCondition` statements [#636](https://github.com/TileDB-Inc/TileDB-Py/pull/636) | |
| * Addition of `ascii` dtype to `Attr` allows `QueryCondition` to support var-length strings [#637](https://github.com/TileDB-Inc/TileDB-Py/pull/637) | |
| # TileDB-Py 0.9.4 Release Notes | |
| ## Improvements | |
| * Support pickling for arrays in write-mode [#626](https://github.com/TileDB-Inc/TileDB-Py/pull/626) | |
| ## Bug Fixes | |
| * Fixed multi-range indexer to default to explicitly pass in the non-empty domain if dimensions are unspecified [#630](https://github.com/TileDB-Inc/TileDB-Py/pull/630) | |
| # TileDB-Py 0.9.3 Release Notes | |
| ## Packaging Notes | |
| * Due to a packaging issue released with 0.9.3 (NumPy ABI compatibility with NumPy < 1.20 for Python 3.8), this section is intentionally left blank. | |
| # TileDB-Py 0.9.2 Release Notes | |
| ## Packaging Notes | |
| * Fixed release builder ordering issue which led to CRLF line endings in 0.9.1 source distribution. | |
| ## API Changes | |
| * Deprecate `Array.timestamp` and replace with `Array.timestamp_range` [#616](https://github.com/TileDB-Inc/TileDB-Py/pull/616) | |
| ## Improvements | |
| * Set `ArraySchema.tile_order=None` for Hilbert-ordered arrays [#609](https://github.com/TileDB-Inc/TileDB-Py/pull/609) | |
| * Use CIBW to build release wheels on Linux [#613](https://github.com/TileDB-Inc/TileDB-Py/pull/613) | |
| * Addition of Pickling functionality for `SparseArray` [#618](https://github.com/TileDB-Inc/TileDB-Py/pull/618) | |
| # TileDB-Py 0.9.1 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.9.1 includes TileDB Embedded [TileDB 2.3.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.3.1) | |
| ## Improvements | |
| * Support passing a timestamp range for consolidation and vacuuming [#603](https://github.com/TileDB-Inc/TileDB-Py/pull/603) | |
| ## Bug Fixes | |
| * FragmentInfo API's to_vacuum_uri() function corrected to iterate through `to_vacuum_num` rather than `fragment_num`[#603](https://github.com/TileDB-Inc/TileDB-Py/pull/603) | |
| * Return "NA" For ArraySchema.tile_order if "Hilbert" [#605](https://github.com/TileDB-Inc/TileDB-Py/pull/605) | |
| # TileDB-Py 0.9.0 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.9.0 includes TileDB Embedded [TileDB 2.3](https://github.com/TileDB-Inc/TileDB/releases/tag/2.3) with a significant | |
| number of new features and improvements. | |
| ## Packaging Notes | |
| * Windows wheels are now built with TileDB Cloud REST support enabled [#541](https://github.com/TileDB-Inc/TileDB-Py/pull/541) | |
| ## Improvements | |
| * Addition of `QueryCondition` API to filter query on attributes [#576](https://github.com/TileDB-Inc/TileDB-Py/pull/576) | |
| ## Bug Fixes | |
| * Fixed `from_pandas` append error for sparse arrayse: no need to specify 'row_start_idx' [#593](https://github.com/TileDB-Inc/TileDB-Py/pull/593) | |
| * Fixed 'index_dims' kwarg handling for `from_pandas` [#590](https://github.com/TileDB-Inc/TileDB-Py/pull/590) | |
| ## API Changes | |
| * `from_dataframe` function has been removed; deprecated in TileDB-Py 0.6 and replaced by `from_pandas`. | |
| --- | |
| # TileDB-Py 0.8.11 Release Notes | |
| ## Bug fixes | |
| * Fixed incorrect NumPy ABI target in Linux wheels [#590](https://github.com/TileDB-Inc/TileDB-Py/pull/590) | |
| * QueryCondition API will cast condition values to the datatype of the corresponding attribute [#589](https://github.com/TileDB-Inc/TileDB-Py/pull/589) | |
| * QueryCondition API errors out when there are mismatched attributes to `query`'s `attr_cond` and `attrs` arguments [#589](https://github.com/TileDB-Inc/TileDB-Py/pull/589) | |
| * QueryCondition API can now parse negative numbers [#589](https://github.com/TileDB-Inc/TileDB-Py/pull/589) | |
| # TileDB-Py 0.8.10 Release Notes | |
| ## Improvements | |
| * Disabled libtiledb Werror compilation argument for from-source builds via setup.py [#574](https://github.com/TileDB-Inc/TileDB-Py/pull/574) | |
| * Relaxed NumPy version requirements for from-source builds via setup.py [#575](https://github.com/TileDB-Inc/TileDB-Py/pull/575) | |
| ## Bug fixes | |
| * Fixed FragmentInfoList where context was not being passed to ArraySchema [#573](https://github.com/TileDB-Inc/TileDB-Py/pull/573) | |
| * Fixed FragmentInfoList where context was not being passed to ArraySchema [#578](https://github.com/TileDB-Inc/TileDB-Py/pull/578) | |
| * Fixed read bug due to large estimated result size [#579](https://github.com/TileDB-Inc/TileDB-Py/pull/579) | |
| * Fixed bug reading nullable attributes due to missing buffer resize [#581](https://github.com/TileDB-Inc/TileDB-Py/pull/581) | |
| * Fixed Python output for `tiledb.stats_dump` [#586](https://github.com/TileDB-Inc/TileDB-Py/pull/586) | |
| # TileDB-Py 0.8.9 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.8.9 includes TileDB Embedded [TileDB 2.2.9](https://github.com/TileDB-Inc/TileDB/releases/tag/2.2.9) | |
| ## Improvements | |
| * Support for iterating over incomplete query results [#548](https://github.com/TileDB-Inc/TileDB-Py/pull/548) | |
| - This feature provides the capability to consume partial query results with a fixed maximum buffer size | |
| rather than the the default behavior of resizing buffers and resubmitting to completion. | |
| Usage example: `examples/incomplete_iteration.py` | |
| (along with test in: `test_libtiledb.py:test_incomplete_return`) | |
| * Rename FragmentsInfo to FragmentInfoList [#551](https://github.com/TileDB-Inc/TileDB-Py/pull/551) | |
| * Dataframe creation uses Zstd default compression level (-1) [#552](https://github.com/TileDB-Inc/TileDB-Py/pull/552) | |
| * Rename Fragment Info API's `non_empty_domain` attribute to `nonempty_domain` [#553](https://github.com/TileDB-Inc/TileDB-Py/pull/553) | |
| * Added configuration option `py.alloc_max_bytes` to control maximum initial buffer allocation [#557](https://github.com/TileDB-Inc/TileDB-Py/pull/557) | |
| ## Bug fixes | |
| * Fixed incorrected error raised in .df[] indexer when pyarrow not installed [#554](https://github.com/TileDB-Inc/TileDB-Py/pull/554) | |
| * Fixed `from_pandas(attr_filters=None, dim_filters=None)` (previously used internal defaults) [#564](https://github.com/TileDB-Inc/TileDB-Py/pull/554) | |
| * Fixed `from_pandas` write bug due to incorrect classification of str/bytes columns [#562](https://github.com/TileDB-Inc/TileDB-Py/pull/562) | |
| * Fix segfault due to mismatched validity num and data buffer sizes [#567](https://github.com/TileDB-Inc/TileDB-Py/pull/567) | |
| # TileDB-Py 0.8.8 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.8.8 includes TileDB Embedded [TileDB 2.2.8](https://github.com/TileDB-Inc/TileDB/releases/tag/2.2.8) | |
| # TileDB-Py 0.8.7 Release Notes | |
| ## Improvements | |
| * ArraySchema support for `cell_order="hilbert"` [#535](https://github.com/TileDB-Inc/TileDB-Py/pull/535) | |
| ## Bug fixes | |
| * Fixed regression in `from_pandas` with string-valued index dimensions [#526](https://github.com/TileDB-Inc/TileDB-Py/pull/526) | |
| * Fixed GC lifetime bug in string buffer conversion [#525](https://github.com/TileDB-Inc/TileDB-Py/pull/526) | |
| * Fixed `FilterList`'s `repr()` method [#528](https://github.com/TileDB-Inc/TileDB-Py/pull/528) | |
| # TileDB-Py 0.8.6 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.8.6 includes TileDB Embedded [TileDB 2.2.7](https://github.com/TileDB-Inc/TileDB/releases/tag/2.2.7) | |
| ## Improvements | |
| * Addition of `VFS()` functions `copy_file()` and `copy_dir()` [#507](https://github.com/TileDB-Inc/TileDB-Py/pull/507) | |
| * Add support in `from_pandas` for storing Pandas extension types as variable-length attributes [#515](https://github.com/TileDB-Inc/TileDB-Py/pull/515) | |
| * Add support for sparse writes to dense arrays [#521](https://github.com/TileDB-Inc/TileDB-Py/pull/521) | |
| ## Bug fixes | |
| * Multi-length attributes, regardless of fixed or var-length, do not work query properly with PyArrow enabled due to lack of Arrow List support. When using `.df[]` with PyArrow enabled, we are returning a clear message to the user to use `query(use_pyarrow=False)` [#513](https://github.com/TileDB-Inc/TileDB-Py/pull/513) | |
| # TileDB-Py 0.8.5 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.8.5 includes TileDB Embedded [TileDB 2.2.6](https://github.com/TileDB-Inc/TileDB/releases/tag/2.2.6) | |
| ## Documentation Updates | |
| * Added example reading/writing RGB (multi-component) array [#487](https://github.com/TileDB-Inc/TileDB-Py/pull/487) | |
| ## Improvements | |
| * Restore `tiledb.stats_dump` default to `verbose=True` [#491](https://github.com/TileDB-Inc/TileDB-Py/pull/491) | |
| * Remove `non_empty_domain_var()` Fragment Info PyBind11 Function and only use `get_non_empty_domain()` for both fixed and var-length domains [#505](https://github.com/TileDB-Inc/TileDB-Py/pull/505) | |
| # TileDB-Py 0.8.4 Release Notes | |
| ## Improvements | |
| * Addition of high-level function `array_fragments()` that returns a `FragmentsInfo` object [#488](https://github.com/TileDB-Inc/TileDB-Py/pull/488) | |
| * Added support for `from_pandas`/`df[]` round-trip of Pandas nullable integer and bool types [#480](https://github.com/TileDB-Inc/TileDB-Py/pull/480) | |
| * Fragment info API example usage now provided at `examples/fragment_info.py` [#479](https://github.com/TileDB-Inc/TileDB-Py/pull/479) | |
| * Fragment info API parameters have been rearranged to match the rest of the TileDB Python API such that the `uri` is provided first and `context`, an optional parameter that defaults to `tiledb.default_ctx()`, is provided second [#479](https://github.com/TileDB-Inc/TileDB-Py/pull/479) | |
| ## Bug fixes | |
| * Fix bug in `Attr` to ensure that all Unicode strings are automatically set to `var=True` [#495]https://github.com/TileDB-Inc/TileDB-Py/pull/495 | |
| * Fix bug in Array.multi_index slicing bug for sparse array with dimension range including 0 [#482](https://github.com/TileDB-Inc/TileDB-Py/pull/482) | |
| # TileDB-Py 0.8.3 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.8.3 includes TileDB Embedded [TileDB 2.2.4](https://github.com/TileDB-Inc/TileDB/releases/tag/2.2.4) | |
| ## Improvements | |
| * Added `nullable` keyword argument to `Attr` constructor [#474](https://github.com/TileDB-Inc/TileDB-Py/pull/474) | |
| ## Bug fixes | |
| * Fix bug in Array.multi_index with slice range including 0 (incorrectly used the nonempty domain as endpoint) [#473](https://github.com/TileDB-Inc/TileDB-Py/pull/473) | |
| # TileDB-Py 0.8.2 Release Notes | |
| ## Packaging Notes | |
| * This is a version bump to fix numpy compatibility pinning in the wheel build system. | |
| # TileDB-Py 0.8.1 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.8.1 includes TileDB Embedded [TileDB 2.2.3](https://github.com/TileDB-Inc/TileDB/releases/tag/2.2.3) | |
| ## Packaging Notes | |
| * TileDB-Py 0.8 does not support Python 2. | |
| # TileDB-Py 0.8.0 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.8.0 includes TileDB Embedded 2.2.2 featuring a number of significant | |
| improvements in core storage engine functionality. See release notes for | |
| [TileDB 2.2.1](https://github.com/TileDB-Inc/TileDB/releases/tag/2.2.1) and | |
| [TileDB 2.2.2](https://github.com/TileDB-Inc/TileDB/releases/tag/2.2.2). | |
| ## Packaging Notes | |
| * TileDB-Py 0.8 does not support Python 2. | |
| ## Improvements | |
| * Add initial `tiledb.from_parquet` functionality (beta) [[a90d5d9b1b](https://github.com/TileDB-Inc/TileDB-Py/commit/a90d5d9b1b6a39b48090592297fe98a7f33338fb)] | |
| * Preload metadata in .df query path to reduce read latency for remote arrays [[79ab12fcf0](https://github.com/TileDB-Inc/TileDB-Py/commit/79ab12fcf0ede0cbac822392a30ee7640595e93c)] | |
| ## Bug fixes | |
| * Update py::dtype usage for compatibility with pybind11 2.6.2 [[9d3d3d3c43](https://github.com/TileDB-Inc/TileDB-Py/commit/9d3d3d3c430fbc058d04773f03ddc63bd47f79e3)] | |
| # TileDB-Py 0.7.7 Release Notes | |
| ## Bug fixes | |
| * Cherry-pick commit 9d3d3d3c43 to ix runtime bug in conda packages built against pybind11 2.6.2 [9d3d3d3c430f](https://github.com/TileDB-Inc/TileDB-Py/commit/9d3d3d3c430fbc058d04773f03ddc63bd47f79e3) | |
| # TileDB-Py 0.7.6 Release Notes | |
| ## Packaging Notes | |
| * TileDB-Py 0.7.x will be the last version of TileDB-Py supporting Python 2. | |
| ## Bug fixes | |
| * Fix read compatibility for empty strings written with 2.1 or 2.2 [#462](https://github.com/TileDB-Inc/TileDB-Py/pull/462) | |
| * Fix #457: make sure to fit automatic tile extent to dim range for date type [#464](https://github.com/TileDB-Inc/TileDB-Py/pull/464) | |
| # TileDB-Py 0.7.5 Release Notes | |
| ## Packaging Notes | |
| * TileDB-Py 0.7.x will be the last version of TileDB-Py supporting Python 2. | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.7.5 includes [TileDB Embedded 2.1.6](https://github.com/TileDB-Inc/TileDB/releases/tag/2.1.6) | |
| ## Improvements | |
| * FragmentInfo API by default returns information from all fragments and dimensions [#444](https://github.com/TileDB-Inc/TileDB-Py/pull/444) | |
| * Add integer multi-indexing for NumPy datetime64 dimensions [#447](https://github.com/TileDB-Inc/TileDB-Py/pull/447) | |
| * Add `from_csv/pandas` support for `timestamp` keyword argument to specify write timestamp [#450](https://github.com/TileDB-Inc/TileDB-Py/pull/450) | |
| * Add verbosity option to `stats_dump()` [#452](https://github.com/TileDB-Inc/TileDB-Py/pull/452) | |
| * Add `unique_dim_values()` to return unique dimension values for a given `SparseArray` [#454](https://github.com/TileDB-Inc/TileDB-Py/pull/454) | |
| * Add support to `query()` for returning subsets of specified dimensions [#458](https://github.com/TileDB-Inc/TileDB-Py/pull/458) | |
| * Optimize string array writes [#459](https://github.com/TileDB-Inc/TileDB-Py/pull/459) | |
| ## Bug fixes | |
| * Fix `Dim.shape` for dense array with datetime dimension [#448](https://github.com/TileDB-Inc/TileDB-Py/pull/448) | |
| # TileDB-Py 0.7.4 Release Notes | |
| ## Improvements | |
| * Support selecting subset of dimensions in Array.query via new keyword argument `dims: List[String]`. The `coords=True` kwarg is still supported for compatibility, and continues to return all dimensions [#433](https://github.com/TileDB-Inc/TileDB-Py/pull/433) | |
| * Support Dim(filters=FilterList) keyword argument to set filters on a per-Dim basis [#434](https://github.com/TileDB-Inc/TileDB-Py/pull/434) | |
| * Support tiledb.from_csv setting attribute and dimension filters by dictionary of {name: filter} [#434](https://github.com/TileDB-Inc/TileDB-Py/pull/434) | |
| * Add ArraySchema.check wrapping `tiledb_array_schema_check` [#435](https://github.com/TileDB-Inc/TileDB-Py/pull/435) | |
| * Add support for attribute fill values `tiledb.Attr(fill=...)` and `Attr.fill` getter [#437](https://github.com/TileDB-Inc/TileDB-Py/pull/437) | |
| ## API Changes | |
| * tiledb.from_csv keyword arg `attrs_filters` renamed to `attr_filters` [#434](https://github.com/TileDB-Inc/TileDB-Py/pull/434) | |
| ## Bug fixes | |
| * Fix bug in `multi_index` slicing of dense arrays [#438](https://github.com/TileDB-Inc/TileDB-Py/pull/438) | |
| # TileDB-Py 0.7.3 Release Notes | |
| ## Improvements | |
| * The default result layout for indexing/querying sparse arrays is now TILEDB_UNORDERED [#428](https://github.com/TileDB-Inc/TileDB-Py/pull/428), [#431](https://github.com/TileDB-Inc/TileDB-Py/pull/431) | |
| * Added documentation for all TileDB-Py configuration parameters [#430](https://github.com/TileDB-Inc/TileDB-Py/pull/430) | |
| * Fixed documentation rendering for `Array.query` [#430](https://github.com/TileDB-Inc/TileDB-Py/pull/430) | |
| ## Bug fixes | |
| * Fix sparse dimension type selection when array type is not specified to from_pandas [#429](https://github.com/TileDB-Inc/TileDB-Py/pull/429) | |
| * Don't pass allows_duplicates=True to dense array constructor (tiledb.from_csv) [#428](https://github.com/TileDB-Inc/TileDB-Py/pull/428) | |
| # TileDB-Py 0.7.2 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.7.2 includes [TileDB Embedded 2.1.3](https://github.com/TileDB-Inc/TileDB/releases/tag/2.1.3) | |
| Including a fix for issue [#409](https://github.com/TileDB-Inc/TileDB-Py/issues/409). | |
| ## Changes | |
| * The default array type for `from_pandas` and `from_csv` is now dense, if unspecified, except when passing a dataframe with string indexes to `from_pandas` [#424](https://github.com/TileDB-Inc/TileDB-Py/pull/408) | |
| ## Improvements | |
| * Automatically determine column to dimension mapping for `tiledb.from_csv` append mode [#408](https://github.com/TileDB-Inc/TileDB-Py/pull/408) | |
| ## Bug fixes | |
| * Fixed `tiledb.from_csv/dataframe` error when ingesting single-row/index datasets [#422]() | |
| * Fixed intermittent `csv_sparse_col_to_dims` failure due to duplicate result ordering [#423](https://github.com/TileDB-Inc/TileDB-Py/pull/423) | |
| # TileDB-Py 0.7.1 Release Notes | |
| ## Improvements | |
| * Added support for `df[]` indexing via `tiledb.Array.query` [#411](https://github.com/TileDB-Inc/TileDB-Py/pull/411) | |
| * Modified `stats_dump` to return internal stats as string, allowing for output in Jupyter notebooks [#403](https://github.com/TileDB-Inc/TileDB-Py/pull/403) | |
| * Added `__repr__` to `Array` and `Ctx` [#413](https://github.com/TileDB-Inc/TileDB-Py/pull/413) | |
| * `tiledb.open` now supports `timestamp` keyword argument [#419](https://github.com/TileDB-Inc/TileDB-Py/pull/419) | |
| * `tiledb.Domain` now supports passing a list of `Dim`s without unpacking [#419](https://github.com/TileDB-Inc/TileDB-Py/pull/419) | |
| ## Bug fixes | |
| * Fixed PyPI wheels load error on newer macOS due to overlinkage against system libraries in build process (curl -> libintl) [#418](https://github.com/TileDB-Inc/TileDB-Py/pull/418) | |
| * Fixed PyPI wheels load error on Windows due to building against TBB [#419](https://github.com/TileDB-Inc/TileDB-Py/pull/419) | |
| * Fixed indexing of attribute named 'coords' [#414](https://github.com/TileDB-Inc/TileDB-Py/pull/414) | |
| * `open_dataframe` now uses the underlying Array's `nonempty_domain` to avoid errors opening unlimited domain arrays [#409](https://github.com/TileDB-Inc/TileDB-Py/pull/409) | |
| # TileDB-Py 0.7.0 Release Notes | |
| ## TileDB Embedded updates: | |
| * TileDB-Py 0.7.0 includes [TileDB Embedded 2.1.2](https://github.com/TileDB-Inc/TileDB/releases/tag/2.1.2) | |
| featuring a number of significant improvements, with major highlights including: | |
| - no longer uses Intel TBB for parallelization by default. Along with many benefits to TileDB Embedded, this | |
| significantly reduces complications and bugs with python multiprocessing fork mode. | |
| - Support coalescing subarray ranges to give major performance boosts. | |
| ## Packaging Notes | |
| * TileDB-Py 0.7 packages on PyPI support macOS 10.13+ and manylinux10-compatible Linux distributions only. | |
| For now, wheels could be produced supporting older systems but without Google Cloud Support; if needed, | |
| please contact us to discuss. | |
| ## Improvements | |
| * Added ".df[]" indexer tiledb.Array: directly returns a Pandas dataframe from a query (uses `multi_index` indexing behavior) [#390](https://github.com/TileDB-Inc/TileDB-Py/pull/389) | |
| * Added parallel CSV ingestion example using Python multiprocessing with `tiledb.from_csv` [#397](https://github.com/TileDB-Inc/TileDB-Py/pull/397) | |
| * Added wrapping and support for TileDB checksumming filters: `ChecksumMD5Filter` and `ChecksumSHA256Filter` [#389](https://github.com/TileDB-Inc/TileDB-Py/pull/389) | |
| * Removed TBB install from default setup.py, corresponding to TileDB Embedded changes [#389](https://github.com/TileDB-Inc/TileDB-Py/pull/389) | |
| * Add support for 'capacity' kwarg to `from_csv`/`from_pandas` [#391](https://github.com/TileDB-Inc/TileDB-Py/pull/391) | |
| * Add support for 'tile' kwarg to `from_csv`/`from_pandas` to customize Dim tile extent [#391](https://github.com/TileDB-Inc/TileDB-Py/pull/391) | |
| * Added '--release-symbols' option for building in release optimization with debug symbols [#402](https://github.com/TileDB-Inc/TileDB-Py/pull/402) | |
| * Changed `allows_duplicates` default to `True` for `from_csv/from_pandas` [#394](https://github.com/TileDB-Inc/TileDB-Py/pull/394) | |
| ## Bug fixes | |
| * Fixed bug indexing anonymous attributes of sparse arrays using `A[]` (did not affect dense or multi_index) [#404](https://github.com/TileDB-Inc/TileDB-Py/pull/404) | |
| * Fixed rendering of column name in mixed dtype exception [#382](https://github.com/TileDB-Inc/TileDB-Py/pull/382) | |
| * Fixed forwarding of 'ctx' kwarg to from_csv/from_pandas [#383](https://github.com/TileDB-Inc/TileDB-Py/pull/383) | |
| * Fixed type of return values for empty results when indexing a sparse array [#384](https://github.com/TileDB-Inc/TileDB-Py/pull/384) | |
| ## Misc Updates | |
| * Added round-trip tests for all filter `repr` objects [#389](https://github.com/TileDB-Inc/TileDB-Py/pull/389) | |
| # TileDB-Py 0.6.6 Release Notes | |
| **Note that we will be removing wheel support for macOS 10.9-10.12 in TileDB-Py 0.7 (planned for release in August 2020).** This change is due to upstream (AWS SDK) minimum version requirements. The minimum supported version for macOS wheels on PyPI will be macOS 10.13. | |
| **Note that we will be removing support for [manylinux1](https://github.com/pypa/manylinux/tree/manylinux1) wheels in TileDB-Py 0.7 (planned for release in August 2020).** manylinux1 is based on CentOS5, which has been unsupported for several years. We now provide wheels built with [manylinux2010](https://www.python.org/dev/peps/pep-0571/), which is based on CentOS6 / glibc 2.12. | |
| ## Improvements | |
| * Bump release target to [TileDB 2.0.7](https://github.com/TileDB-Inc/TileDB/releases/tag/2.0.7) | |
| # TileDB-Py 0.6.5 Release Notes | |
| We have added manylinux2010 wheels, corresponding to CentOS6 / glibc 2.12. | |
| We are deprecating support for manylinux1 (CentOS5 / glibc 2.0.7), which is not supported by | |
| the Google Cloud Storage SDK. We are planning to remove manylinux1 wheel support in the | |
| TileDB-Py 0.7 release. | |
| ## Improvements | |
| * Enabled Google Cloud Storage support in macOS and linux (manylinux2010) wheels on PyPI ([#364](https://github.com/TileDB-Inc/TileDB-Py/pull/364)) | |
| # TileDB-Py 0.6.4 Release Notes | |
| ## API notes | |
| * Deprecated `initialize_ctx` in favor of `default_ctx(config: tiledb.Config)` [#351](https://github.com/TileDB-Inc/TileDB-Py/pull/351) | |
| ## Improvements | |
| * Bump release target to [TileDB 2.0.6](https://github.com/TileDB-Inc/TileDB/releases/tag/2.0.6) | |
| * Improved error reporting for input data type mismatches [#359](https://github.com/TileDB-Inc/TileDB-Py/pull/359) | |
| * Added `tiledb.VFS.dir_size` [#343](https://github.com/TileDB-Inc/TileDB-Py/pull/343) | |
| * Added read and buffer conversion statistics for python to `tiledb.stats_dump` [#354](https://github.com/TileDB-Inc/TileDB-Py/pull/354) | |
| * Implemented string deduplication to reduce conversion time for string arrays [#357](https://github.com/TileDB-Inc/TileDB-Py/pull/357) | |
| ## Bug fixes | |
| * Fixed argument order for `Array.consolidate` with a Config override parameter [#344](https://github.com/TileDB-Inc/TileDB-Py/pull/344) | |
| # TileDB-Py 0.6.3 Release Notes | |
| ## Improvements | |
| * Bump release target to [TileDB 2.0.5](https://github.com/TileDB-Inc/TileDB/releases/tag/2.0.5) | |
| ## Bug fixes | |
| * Fix unnecessary implicit ordering requirement for multi-attribute assignment. [#328](https://github.com/TileDB-Inc/TileDB-Py/pull/328) | |
| # TileDB-Py 0.6.2 Release Notes | |
| ## Bug fixes | |
| * Fix `nonempty_domain` with heterogeneous non-string dimensions ([#320](https://github.com/TileDB-Inc/TileDB-Py/pull/320)) | |
| ## Improvements | |
| * Add doctest for `tiledb.vacuum` ([#319](https://github.com/TileDB-Inc/TileDB-Py/pull/320)) | |
| # TileDB-Py 0.6.1 Release Notes | |
| ## Bug fixes | |
| * Fix assignment order for `nonempty_domain` with string dimensions ([#308](https://github.com/TileDB-Inc/TileDB-Py/pull/308)) (test in [#311](https://github.com/TileDB-Inc/TileDB-Py/commit/35e5ff64ccfe7bf8f30a5900bfbe67c46cd1f97d)) | |
| * Fix bug in string attribute handling for var-length attributes ([#307](https://github.com/TileDB-Inc/TileDB-Py/issues/307)) | |
| * Fix regression reading anonymous attributes from TileDB 1.7 arrays ([#311](https://github.com/TileDB-Inc/TileDB-Py/pull/311)) | |
| * Fix incorrect `multi_index` error when string attribute results are empty ([#311](https://github.com/TileDB-Inc/TileDB-Py/pull/311)) | |
| # TileDB-Py 0.6.0 Release Notes | |
| ## Improvements | |
| * Target TileDB version 2.0 | |
| - Added support for heterogeneous and string-typed dimensions [#304](https://github.com/TileDB-Inc/TileDB-Py/pull/304) | |
| - Added support for `tiledb_array_vacuum` for cleaning up consolidated fragments | |
| * Added Windows wheels for Python 3.7 and 3.8 on PyPI | |
| # TileDB-Py 0.5.9 Release Notes | |
| * Bump release target to [TileDB 1.7.7](https://github.com/TileDB-Inc/TileDB/releases/tag/1.7.7) | |
| # TileDB-Py 0.5.8 Release Notes | |
| * Rebuild/release due to wheel build error on linux for 0.5.7. | |
| # TileDB-Py 0.5.7 Release Notes | |
| * Bump release target to [TileDB 1.7.6](https://github.com/TileDB-Inc/TileDB/releases/tag/1.7.6) | |
| # TileDB-Py 0.5.6 Release Notes | |
| * Bump release target to [TileDB 1.7.5](https://github.com/TileDB-Inc/TileDB/releases/tag/1.7.5) | |
| # TileDB-Py 0.5.5 Release Notes | |
| * Bump release target to [TileDB 1.7.4](https://github.com/TileDB-Inc/TileDB/releases/tag/1.7.4) | |
| ## Improvements | |
| - Return coordinates by default for dense `multi_index` queries [#259]( | |
| https://github.com/TileDB-Inc/TileDB-Py/pull/259) | |
| # TileDB-Py 0.5.4 Release Notes | |
| * Bump release target to [TileDB 1.7.3](https://github.com/TileDB-Inc/TileDB/releases/tag/1.7.3) | |
| ## Improvements | |
| - macOS wheels are now available on PyPI [#258](https://github.com/TileDB-Inc/TileDB-Py/pull/258) | |
| - Delay default ctx initialization, allows per-process global config options to be controlled by user [#256](https://github.com/TileDB-Inc/TileDB-Py/pull/256) | |
| # TileDB-Py 0.5.3 Release Notes | |
| PyPI packages: https://pypi.org/project/tiledb/0.5.3/ | |
| ## Improvements | |
| - Reduce i/o overhead of `tiledb.open` and array constructors. [#239](https://github.com/TileDB-Inc/TileDB-Py/pull/239), [#240](https://github.com/TileDB-Inc/TileDB-Py/pull/240) | |
| - Internal support for retrying incomplete queries in all array indexing modes. [#238](https://github.com/TileDB-Inc/TileDB-Py/pull/238), [#252](https://github.com/TileDB-Inc/TileDB-Py/pull/252) | |
| - Eliminate reference cycles to improve Ctx cleanup. [#249](https://github.com/TileDB-Inc/TileDB-Py/pull/249) | |
| - Support for retrieving compressor level from filter. [#234](https://github.com/TileDB-Inc/TileDB-Py/pull/234) | |
| ## Bug fixes | |
| - Fix variable-length indexing error. [#236](https://github.com/TileDB-Inc/TileDB-Py/pull/236) | |
| - Fix race condition initializing `tiledb.cloud` mixin from thread pool. [#246](https://github.com/TileDB-Inc/TileDB-Py/pull/246) | |
| # TileDB-Py 0.5.2 Release Notes | |
| ## Bug fixes | |
| - Fix bug in multi_index result buffer calculation [#232](https://github.com/TileDB-Inc/TileDB-Py/pull/232) | |
| # TileDB-Py 0.5.1 Release Notes | |
| ## Bug fixes | |
| - [Fix current buffer size calculation](https://github.com/TileDB-Inc/TileDB-Py/commit/3af75b5911b2195ceb66a41d582d9ffa9aa227b6) | |
| - [Fix incorrect query_free in multi-range dense path](https://github.com/TileDB-Inc/TileDB-Py/commit/dbec665da3ebd0e0b5a341d22e47b25ede05cd7d) | |
| ## Other | |
| - [Support '--tiledb=source' option for setup.py to ensure build from source](https://github.com/TileDB-Inc/TileDB-Py/commit/67e7c5c490caf97c5351352cb720116a1c5e1a0d) | |
| # TileDB-Py 0.5.0 Release Notes | |
| ## New features | |
| - add support for multi-range queries [#219](https://github.com/TileDB-Inc/TileDB-Py/pull/219) | |
| - add support for TileDB array metadata [#213](https://github.com/TileDB-Inc/TileDB-Py/pull/213) | |
| - add support for TILEDB_DATETIME_* attributes, domains, and slicing [#211](https://github.com/TileDB-Inc/TileDB-Py/pull/211) | |
| - add support for retrieving list of fragments written by the most recent write to an array [#207](https://github.com/TileDB-Inc/TileDB-Py/pull/207) | |
| ## Bug fixes | |
| - fix read error with multi-attribute sparse arrays [#214](https://github.com/TileDB-Inc/TileDB-Py/pull/214) | |
| # TileDB-Py 0.4.4 Release Notes | |
| * Bump release target to [TileDB 1.6.3](https://github.com/TileDB-Inc/TileDB/releases/tag/1.6.3) | |
| ## New features | |
| - add `dim_type` keyword argument to `from_numpy` in order to override inferred Dimension dtype [#194](https://github.com/TileDB-Inc/TileDB-Py/pull/194) | |
| - add `Array.domain_index`: slice over any range within the domain bounds, including negative slices [#202](https://github.com/TileDB-Inc/TileDB-Py/pull/202) | |
| # TileDB-Py 0.4.3 Release Notes | |
| * Bump release target to [TileDB 1.6.0](https://github.com/TileDB-Inc/TileDB/releases/tag/1.6.0) | |
| ## New features | |
| - allow `tiledb.open` and `Array.create` to take an optional Ctx to override schema [#162](https://github.com/TileDB-Inc/TileDB-Py/pull/162) | |
| - add `tiledb.array_exists` [#167](https://github.com/TileDB-Inc/TileDB-Py/pull/167) | |
| ## Bug fixes | |
| - wrap query_submits into try / finally blocks correctly propagate KeyboardInterrupt errors while cleaning up resources [#155](https://github.com/TileDB-Inc/TileDB-Py/pull/155) | |
| - fixed OOB access in exception handling path [#159](https://github.com/TileDB-Inc/TileDB-Py/pull/159) | |
| - raise an error when trying to consolidate an open readonly array [#172](https://github.com/TileDB-Inc/TileDB-Py/pull/172) | |
| # TileDB-Py 0.4.2 Release Notes | |
| TileDB-Py 0.4.2 contains several improvements as well as bug-fixes associated with the TileDB 1.5.1 release. | |
| ## New features | |
| - support for NumPy complex types ([#142](https://github.com/TileDB-Inc/TileDB-Py/pull/142)) | |
| ## Bug fixes | |
| - fixed query buffer memory leak ([#151](https://github.com/TileDB-Inc/TileDB-Py/pull/151)) | |
| - fixed segfault during consolidation ([TileDB #1213](https://github.com/TileDB-Inc/TileDB/pull/1213)) | |
| - *note: to receive this fix, conda and source builds should be updated to TileDB 1.5.1. TileDB-Py 0.4.2 binaries on PyPI bundle the updated TileDB 1.5.1 library.* | |
| - fixed indexing with array dtype different from the platform default ([#146](https://github.com/TileDB-Inc/TileDB-Py/pull/146)) | |
| - fixed `VFS.is_bucket` when VFS is initialized with a Ctx object ([#148](https://github.com/TileDB-Inc/TileDB-Py/pull/148)) | |
| - fixed `schema_like` to correctly forward a Ctx keyword arg ([#148](https://github.com/TileDB-Inc/TileDB-Py/pull/148)) | |
| # TileDB-Py 0.4.1 Release Notes | |
| ## New Features: | |
| * several high-level API additions (tiledb.open, .save, .empty_like, .schema_like), and serialization improvements including pickling support for DenseArray objects (#129) | |
| * manylinux1 wheels for Python 2.7, 3.5, 3.6, and 3.7 are available on PyPI: https://pypi.org/project/tiledb | |
| # TileDB-Py 0.4.0 Release Notes | |
| This release builds TileDB-Py against TileDB 1.5 | |
| ## New Features: | |
| * support for variable-length arrays (#120) | |
| ## Breaking changes: | |
| * the Ctx argument is now a keyword argument, simplifying API use in the common case (#122) | |
| for example: `tiledb.DenseArray(ctx, uri, ...)` becomes: tiledb.DenseArray(uri, ...) | |
| or optionally `tiledb.DenseArray(uri, ..., ctx=ctx)` | |