himanshunitrr/LaViDa-Pathgen
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The dataset generation failed because of a cast error
Error code: DatasetGenerationCastError
Exception: DatasetGenerationCastError
Message: An error occurred while generating the dataset
All the data files must have the same columns, but at some point there are 4 new columns ({'file_id', 'wsi_id', 'position', 'type'})
This happened while the json dataset builder was generating data using
hf://datasets/himanshunitrr/LaViDa-PathGen-Instruct-and-VQA/pathgen_stage2_data.json (at revision 3d796f1fba73c498cdadf1aad86e59a9cd002528)
Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)
Traceback: Traceback (most recent call last):
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1871, in _prepare_split_single
writer.write_table(table)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/arrow_writer.py", line 643, in write_table
pa_table = table_cast(pa_table, self._schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2293, in table_cast
return cast_table_to_schema(table, schema)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/table.py", line 2241, in cast_table_to_schema
raise CastError(
datasets.table.CastError: Couldn't cast
id: string
image: string
conversations: list<item: struct<from: string, predict: string, value: string>>
child 0, item: struct<from: string, predict: string, value: string>
child 0, from: string
child 1, predict: string
child 2, value: string
type: string
wsi_id: string
file_id: string
position: list<item: string>
child 0, item: string
-- schema metadata --
pandas: '{"index_columns": [], "column_indexes": [], "columns": [{"name":' + 921
to
{'id': Value(dtype='string', id=None), 'image': Value(dtype='string', id=None), 'conversations': [{'from': Value(dtype='string', id=None), 'value': Value(dtype='string', id=None)}]}
because column names don't match
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1436, in compute_config_parquet_and_info_response
parquet_operations = convert_to_parquet(builder)
File "/src/services/worker/src/worker/job_runners/config/parquet_and_info.py", line 1053, in convert_to_parquet
builder.download_and_prepare(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 925, in download_and_prepare
self._download_and_prepare(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1001, in _download_and_prepare
self._prepare_split(split_generator, **prepare_split_kwargs)
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1742, in _prepare_split
for job_id, done, content in self._prepare_split_single(
File "/src/services/worker/.venv/lib/python3.9/site-packages/datasets/builder.py", line 1873, in _prepare_split_single
raise DatasetGenerationCastError.from_cast_error(
datasets.exceptions.DatasetGenerationCastError: An error occurred while generating the dataset
All the data files must have the same columns, but at some point there are 4 new columns ({'file_id', 'wsi_id', 'position', 'type'})
This happened while the json dataset builder was generating data using
hf://datasets/himanshunitrr/LaViDa-PathGen-Instruct-and-VQA/pathgen_stage2_data.json (at revision 3d796f1fba73c498cdadf1aad86e59a9cd002528)
Please either edit the data files to have matching columns, or separate them into different configurations (see docs at https://hf.co/docs/hub/datasets-manual-configuration#multiple-configurations)Need help to make the dataset viewer work? Make sure to review how to configure the dataset viewer, and open a discussion for direct support.
id string | image string | conversations list |
|---|---|---|
000000000 | TCGA-AA-3844-01Z-00-DX1.bf88ce1f-0601-40c8-813e-4e3df51bd2f0_35136_33344.png | [
{
"from": "human",
"value": "<image>\nRelay a brief, clear account of the picture shown."
},
{
"from": "gpt",
"value": "The colon tissue exhibits pleomorphism, hyperchromatic nuclei, and irregular glandular architecture, indicative of a neoplastic process. Stroma shows inflammatory infiltration ... |
000000001 | TCGA-22-5474-01Z-00-DX1.8736FB24-7E65-4ACB-9325-382D7F864F62_41024_35104.png | [
{
"from": "human",
"value": "Share a concise interpretation of the image provided.\n<image>"
},
{
"from": "gpt",
"value": "The tissue image reveals dense cellular infiltration, suggesting inflammation, and cells with large, hyperchromatic nuclei and high nuclear-to-cytoplasmic ratios indicative ... |
000000002 | TCGA-CM-4746-01Z-00-DX1.c83b9795-bf45-4100-9052-a7e485e0f770_84672_36288.png | [
{
"from": "human",
"value": "<image>\nCreate a compact narrative representing the image presented."
},
{
"from": "gpt",
"value": "The tissue section shows epithelial cells with pleomorphism, high nuclear-to-cytoplasmic ratios, hyperchromatic and irregular nuclei, and conspicuous nucleoli. Glandu... |
000000003 | TCGA-55-8621-01Z-00-DX1.7C519007-D59D-432A-BF4D-23D14A1C8BB6_13280_13056.png | [
{
"from": "human",
"value": "Provide a brief description of the given image.\n<image>"
},
{
"from": "gpt",
"value": "The lung tissue image displays myofibroblasts with elongated nuclei and eosinophilic cytoplasm, indicative of collagen-rich fibrosis. Epithelial cells, forming glandular structure... |
000000004 | TCGA-AH-6547-01Z-00-DX1.73040c3e-8219-4d21-88f2-613218d32297_5472_8320.png | [
{
"from": "human",
"value": "Render a clear and concise summary of the photo.\n<image>"
},
{
"from": "gpt",
"value": "The tissue shows irregular, atypical glandular structures indicative of adenocarcinoma, with hyperchromatic nuclei, high nuclear-to-cytoplasmic ratio, and pleomorphism. Desmoplas... |
000000005 | TCGA-BP-4770-01Z-00-DX1.d8a5f4f9-c07d-4465-823f-6c4b3759b4ad_9792_7584.png | [
{
"from": "human",
"value": "<image>\nCreate a compact narrative representing the image presented."
},
{
"from": "gpt",
"value": "The tissue section exhibits pleomorphism, hyperchromatic large nuclei, high nucleus-to-cytoplasm ratios, prominent nucleoli, and disorganized architecture. Densely pa... |
000000006 | TCGA-D8-A1JM-01Z-00-DX1.3CD15BC8-08B3-4BEE-9FD7-A8BEED33268E_34336_69120.png | [
{
"from": "human",
"value": "Give a short and clear explanation of the subsequent image.\n<image>"
},
{
"from": "gpt",
"value": "The breast tissue image shows a duct with epithelial cells displaying pleomorphism and hyperchromatic nuclei, suggesting abnormality. Surrounding ducts are infiltrated... |
000000007 | TCGA-H9-A6BY-01Z-00-DX1.304BEB19-3F0A-4676-B077-A4650F5C84A5_9312_15680.png | [
{
"from": "human",
"value": "Create a compact narrative representing the image presented.\n<image>"
},
{
"from": "gpt",
"value": "The microscopic image of the prostate tissue exhibits closely packed cells with variable nuclear size, prominent nucleoli, and moderate cytoplasm. Disrupted architect... |
000000008 | TCGA-CJ-6033-01Z-00-DX1.5DD2C8F4-50E1-47C3-B5D4-058AE04095DD_88704_44960.png | [
{
"from": "human",
"value": "Write a terse but informative summary of the picture.\n<image>"
},
{
"from": "gpt",
"value": "The renal tissue exhibits cells with eosinophilic cytoplasm and varying nuclear features, including hyperchromasia, suggesting cellular atypia. Tubular structures and an exp... |
000000009 | TCGA-HT-8018-01Z-00-DX1.1C1BBFD4-8C4A-4A6F-8D64-70A4F41814AF_12928_6976.png | [
{
"from": "human",
"value": "<image>\nPresent a compact description of the photo’s key features."
},
{
"from": "gpt",
"value": "The brain tissue image shows a homogeneous neuropil, scattered neurons and glial cells, and eosinophilic, possibly inflamed blood vessels with perivascular cuffing. Dar... |
000000010 | TCGA-5C-AAPD-01Z-00-DX1.D64255FC-83A4-497E-AAFC-D8E92966D30A_32064_9792.png | [
{
"from": "human",
"value": "<image>\nPresent a compact description of the photo’s key features."
},
{
"from": "gpt",
"value": "The liver tissue exhibits hepatocyte ballooning degeneration with cellular swelling and multinucleation, eosinophilic intracytoplasmic inclusions, and disrupted archite... |
000000011 | TCGA-K4-A6MB-01Z-00-DX1.4A6009D3-05D9-4E8B-8EB2-4A52B5B6FED8_16512_47104.png | [
{
"from": "human",
"value": "Give a short and clear explanation of the subsequent image.\n<image>"
},
{
"from": "gpt",
"value": "The tissue section displays smooth muscle cells with eosinophilic cytoplasm and elongated nuclei, arranged in bundles with some areas of less density, suggestive of va... |
000000012 | TCGA-MI-A75C-01Z-00-DX1.468BA4AC-A7CB-499C-B98D-C1BEF4AA8867_46144_60960.png | [
{
"from": "human",
"value": "Relay a brief, clear account of the picture shown.\n<image>"
},
{
"from": "gpt",
"value": "The liver tissue exhibits cellular and nuclear pleomorphism in hepatocytes, lipid droplets indicating steatosis, and disrupted architecture suggesting necrosis. Hyperchromatic,... |
000000013 | TCGA-DD-AAC9-01Z-00-DX1.825DEDA1-1E85-4D59-80B6-21F15E9A388C_77408_25344.png | [
{
"from": "human",
"value": "Provide a brief description of the given image.\n<image>"
},
{
"from": "gpt",
"value": "The tissue section likely represents a normal liver parenchyma, showing uniform eosinophilic cytoplasm and basophilic nuclei with potential sinusoidal spaces and supportive connec... |
000000014 | TCGA-BH-A0B8-01Z-00-DX1.380ABAE9-EA83-4E9B-BFB2-6476A86C1ADD_71840_66848.png | [
{
"from": "human",
"value": "Provide a brief description of the given image.\n<image>"
},
{
"from": "gpt",
"value": "The tissue image shows dense, wavy, eosinophilic collagen fibers in parallel arrangements with a herringbone pattern, typical of fibrocystic changes in the breast. It also include... |
000000015 | TCGA-BR-8360-01Z-00-DX1.5250b193-e906-4279-b8cf-aac8f37183be_55296_43392.png | [
{
"from": "human",
"value": "<image>\nRender a clear and concise summary of the photo."
},
{
"from": "gpt",
"value": "The gastric tissue shows extensive damage, loss of mucosal architecture, and acute inflammation with necrosis and eosinophilic debris. Helicobacter pylori bacteria are evident in... |
000000016 | TCGA-CQ-A4C6-01Z-00-DX1.98BDE0C7-81D1-410C-A0AD-1CD98F7DFD87_32928_8416.png | [
{
"from": "human",
"value": "Create a compact narrative representing the image presented.\n<image>"
},
{
"from": "gpt",
"value": "The tissue section shows dense fibrous connective tissue with collagen fibers and spindle cells, suggestive of dermal or deeper layers. Adipose tissue with large adip... |
000000017 | TCGA-W4-A7U4-01Z-00-DX1.7A0B9621-BB43-4A5F-A28E-D97EF25C8714_178656_32064.png | [
{
"from": "human",
"value": "<image>\nCreate a compact narrative representing the image presented."
},
{
"from": "gpt",
"value": "The image depicts a highly variable cell population with hyperchromatic, anaplastic nuclei, prominent nucleoli, and inconsistent cytoplasm. The tissue shows disorgani... |
000000018 | TCGA-CH-5754-01Z-00-DX1.4dae6511-baa2-4472-b625-a41c9c95dec8_46656_15744.png | [
{
"from": "human",
"value": "Describe the image concisely.\n<image>"
},
{
"from": "gpt",
"value": "The prostate tissue exhibits normal morphology with variable cell sizes and shapes, pink to purple cytoplasm, and dark-stained nuclei. Prominent nucleoli indicate active protein synthesis. The stru... |
000000019 | TCGA-ZC-AAAH-01Z-00-DX1.71D7607F-555B-4208-AE17-28E71465423A_56992_27168.png | [
{
"from": "human",
"value": "Give a short and clear explanation of the subsequent image.\n<image>"
},
{
"from": "gpt",
"value": "The microscopic image reveals a neoplastic tissue with high pleomorphism, hyperchromatic nuclei, and prominent nucleoli, set in scant stroma. Cells vary in size and sh... |
000000020 | TCGA-DX-A23T-01Z-00-DX1.AEFA32EC-6E45-471F-A0F9-D891F1B25A22_102240_29280.png | [
{
"from": "human",
"value": "Relay a brief, clear account of the picture shown.\n<image>"
},
{
"from": "gpt",
"value": "The tissue exhibits pleomorphism, enlarged hyperchromatic nuclei, and abundant eosinophilic cytoplasm. Some cells show multinucleation. The stroma contains pink collagen fibers... |
000000021 | TCGA-BF-AAP2-01Z-00-DX1.EFDAA5ED-1360-4D86-8515-BF57CA1E4B5A_21536_23200.png | [
{
"from": "human",
"value": "Share a concise interpretation of the image provided.\n<image>"
},
{
"from": "gpt",
"value": "The image shows pleomorphic cells with hyperchromatic, irregular nuclei, high nuclear-to-cytoplasmic ratios, prominent nucleoli, and active mitosis. The scant cytoplasm and ... |
000000022 | TCGA-ET-A39P-01Z-00-DX1.DB1669F1-194B-45E5-AEE1-256ABCFE1544_56224_29984.png | [
{
"from": "human",
"value": "<image>\nRelay a brief, clear account of the picture shown."
},
{
"from": "gpt",
"value": "The tissue section shows normal thyroid gland histology with follicular epithelial cells lining thyroid follicles, containing colloid. Supporting stroma includes dense connecti... |
000000023 | TCGA-63-A5MV-01Z-00-DX1.72B97C7E-0AE9-468B-9E85-C98BA40CBBCB_12000_7008.png | [
{
"from": "human",
"value": "<image>\nDescribe the image concisely."
},
{
"from": "gpt",
"value": "The tissue image exhibits dense cellular infiltration, hyperchromatic nuclei, high nucleus-to-cytoplasm ratios, and irregular nuclear contours, suggesting neoplastic activity. Glandular structures ... |
000000024 | TCGA-YU-A94I-01Z-00-DX1.CF7FD72C-A39C-48BD-9E93-3EBAAA3457BA_32768_66528.png | [
{
"from": "human",
"value": "<image>\nSummarize the visual content of the image."
},
{
"from": "gpt",
"value": "The tissue sample shows densely packed cells with pleomorphic, hyperchromatic nuclei, scant cytoplasm, and prominent nucleoli, indicative of high proliferation. The disorganized archit... |
000000025 | TCGA-EM-A2CT-01Z-00-DX1.717B3037-9B23-42A2-BB3E-6710FCEF8D58_17440_13312.png | [
{
"from": "human",
"value": "<image>\nWrite a terse but informative summary of the picture."
},
{
"from": "gpt",
"value": "The microscopic image reveals cells with variable sizes and shapes, prominent nuclei, and eosinophilic cytoplasm suggesting protein abundance. Irregular cell packing and int... |
000000026 | TCGA-AO-A12H-01Z-00-DX1.C6CCBD9D-FB41-4F6C-84FB-A43E0A77E696_44064_15200.png | [
{
"from": "human",
"value": "<image>\nCreate a compact narrative representing the image presented."
},
{
"from": "gpt",
"value": "The breast tissue shows dense cellularity with hyperchromatic nuclei and pleomorphism, indicating potential neoplastic activity. The fibrous stroma contains collageno... |
000000027 | TCGA-MP-A4T9-01Z-00-DX1.F7B341C4-EBCD-455F-BE90-3B77AC6B76EC_76480_27104.png | [
{
"from": "human",
"value": "Offer a succinct explanation of the picture presented.\n<image>"
},
{
"from": "gpt",
"value": "The image displays a dense lymphocytic infiltrate in the lung, characterized by small to medium-sized mononuclear cells with clumped chromatin and scant cytoplasm. Backgrou... |
000000028 | TCGA-L3-A524-01Z-00-DX1.F3C6DE3B-C59E-4805-A03F-4A0CA3AB2A5E_88960_37056.png | [
{
"from": "human",
"value": "<image>\nProvide a brief description of the given image."
},
{
"from": "gpt",
"value": "The tissue image exhibits spindle-shaped, hyperchromatic cells in interlacing fascicles, with eosinophilic cytoplasm, suggesting a mesenchymal origin like smooth muscle. The disor... |
000000029 | TCGA-G9-6343-01Z-00-DX1.e5756f91-d1a7-4cb4-8140-e93bb92bf194_55200_65536.png | [
{
"from": "human",
"value": "Summarize the visual content of the image.\n<image>"
},
{
"from": "gpt",
"value": "The tissue image shows elongated, eosinophilic spindle-shaped cells in bundles, consistent with smooth muscle, typical of prostate stroma. Features include uniform, hyperchromatic nucl... |
000000030 | TCGA-CZ-5989-01Z-00-DX1.c6fd2257-4742-4c4e-ade2-995f54f1cfa8_76992_66528.png | [
{
"from": "human",
"value": "Provide a brief description of the given image.\n<image>"
},
{
"from": "gpt",
"value": "The microscopic image reveals spindle-shaped cells with elongated nuclei and eosinophilic cytoplasm, arranged in a wavy pattern, suggesting smooth muscle or fibroblasts. Areas of ... |
000000031 | TCGA-55-A4DF-01Z-00-DX1.C945E1AD-BEF4-403F-BB11-BAC831D24CDA_4768_9568.png | [
{
"from": "human",
"value": "Offer a succinct explanation of the picture presented.\n<image>"
},
{
"from": "gpt",
"value": "The lung tissue image shows extensive necrosis, characterized by loss of cellular architecture and eosinophilic staining. Notably, broad, branching, few-septated hyphae res... |
000000032 | TCGA-CV-6948-01Z-00-DX1.5FBC4FBA-681D-45AB-BE39-3976CED6A550_50112_67488.png | [
{
"from": "human",
"value": "Describe the image concisely.\n<image>"
},
{
"from": "gpt",
"value": "The image shows a histological section of salivary gland tissue, featuring glandular structures with luminal eosinophilic secretions and a central duct. The epithelial lining is columnar or cuboida... |
000000033 | TCGA-AG-3600-01Z-00-DX1.1d506eeb-bb65-4688-bdb2-6ac101fc1dbe_48576_76960.png | [
{
"from": "human",
"value": "<image>\nDescribe the image concisely."
},
{
"from": "gpt",
"value": "The rectal tissue image reveals a columnar epithelium with basally located nuclei and infiltration of inflammatory cells in the lamina propria, suggesting inflammation. Glandular structures vary in... |
000000034 | TCGA-D8-A1JB-01Z-00-DX1.6CF48257-066C-4B8C-91AA-30A6B4AD4307_61792_29280.png | [
{
"from": "human",
"value": "Provide a brief description of the given image.\n<image>"
},
{
"from": "gpt",
"value": "The breast tissue section exhibits cellular atypia with hyperchromatic nuclei, lymphocyte infiltration in the stroma, and disrupted architecture. The fibrous, spindle-shaped strom... |
000000035 | TCGA-GN-A269-01Z-00-DX1.8DEB7375-C896-48F9-903F-5BA1384B10D7_93024_34688.png | [
{
"from": "human",
"value": "Share a concise interpretation of the image provided.\n<image>"
},
{
"from": "gpt",
"value": "The tissue sample shows a dense infiltration of inflammatory cells with high nucleus-to-cytoplasm ratios, stained with H&E, indicative of active inflammation. Neutrophils, l... |
000000036 | TCGA-F5-6702-01Z-00-DX1.6f9c3c37-a762-4847-a3c6-44ea50b34eec_103712_48416.png | [
{
"from": "human",
"value": "Summarize the visual content of the image.\n<image>"
},
{
"from": "gpt",
"value": "The rectal tissue sample exhibits a normal gastrointestinal mucosal layer with columnar epithelial cells, basally located nuclei, and eosinophilic cytoplasm. A diverse lamina propria w... |
000000037 | TCGA-IG-A3Y9-01Z-00-DX1.830A7D80-F4B1-4A78-B559-92F4461688E1_18720_41216.png | [
{
"from": "human",
"value": "Describe the image concisely.\n<image>"
},
{
"from": "gpt",
"value": "The tissue image shows disorganized, pleomorphic stratified squamous epithelial cells without normal maturation. Cells display hyperchromatic, variably sized nuclei, increased nuclear-to-cytoplasmi... |
000000038 | TCGA-D1-A1O5-01Z-00-DX1.A825C5EE-A9BD-43D0-90F0-3FFD980E8446_91616_60160.png | [
{
"from": "human",
"value": "<image>\nCreate a compact narrative representing the image presented."
},
{
"from": "gpt",
"value": "The microscopic image displays spindle-shaped cells in interlacing fascicles with elongated, wavy nuclei and eosinophilic cytoplasm, typical of smooth muscle tissue. ... |
000000039 | TCGA-KN-8422-01Z-00-DX1.26F9BF86-6D2C-4C99-BFEB-A3708AD48734_23552_43808.png | [
{
"from": "human",
"value": "Present a compact description of the photo’s key features.\n<image>"
},
{
"from": "gpt",
"value": "The renal tissue image shows a nested architecture and eosinophilic cytoplasm in cells with round to oval, variably sized nuclei suggesting atypia. Some cells display c... |
000000040 | TCGA-49-6767-01Z-00-DX1.53459c0e-b8ec-4893-9910-87b63c503134_41984_70048.png | [
{
"from": "human",
"value": "<image>\nDescribe the image concisely."
},
{
"from": "gpt",
"value": "The lung tissue image shows a congested vessel surrounded by red blood cells, suggesting hemorrhage. Alveolar spaces are visible, separated by thin septa, with intact walls but unclear detail. The ... |
000000041 | TCGA-VS-A8EG-01Z-00-DX1.B7697DF5-A36B-43A3-B043-A0CC174AFA78_36448_31744.png | [
{
"from": "human",
"value": "Provide a brief description of the given image.\n<image>"
},
{
"from": "gpt",
"value": "The tissue sample exhibits pleomorphism, hyperchromatic nuclei, increased nuclear-to-cytoplasmic ratios, and visible nucleoli, indicative of high cellular activity. Disorganized a... |
000000042 | TCGA-3C-AALK-01Z-00-DX1.4E6EB156-BB19-410F-878F-FC0EA7BD0B53_55584_54784.png | [
{
"from": "human",
"value": "<image>\nWrite a terse but informative summary of the picture."
},
{
"from": "gpt",
"value": "The tissue shows a layer of atypical, cuboidal to columnar cells with large, hyperchromatic, pleomorphic nuclei and prominent nucleoli. The eosinophilic cytoplasm is abundan... |
000000043 | TCGA-CV-7440-01Z-00-DX1.ABC0027C-EBB2-4BDF-9AE7-116D4F38DD70_27904_16256.png | [
{
"from": "human",
"value": "Describe the image concisely.\n<image>"
},
{
"from": "gpt",
"value": "The histological section displays well-preserved, encapsulated glandular structures, likely eccrine sweat glands, featuring uniform, secretory cells. The surrounding stroma is dense and fibrous wit... |
000000044 | TCGA-EJ-5497-01Z-00-DX1.59c034ce-0c62-4b41-bd14-5e50d1584ae0_56352_60704.png | [
{
"from": "human",
"value": "Give a short and clear explanation of the subsequent image.\n<image>"
},
{
"from": "gpt",
"value": "The prostate tissue exhibits glands with a papillary or cribriform pattern, lined by epithelial cells with moderate cytoplasm and round nuclei. The stroma is connectiv... |
000000045 | TCGA-DD-A1EL-01Z-00-DX1.D9ED1914-414E-4864-8ACF-4FFA2791129E_59712_34048.png | [
{
"from": "human",
"value": "<image>\nRelay a brief, clear account of the picture shown."
},
{
"from": "gpt",
"value": "The liver tissue image reveals hepatocyte disruption, degeneration, and swelling indicative of injury. Eosinophilic Mallory-Denk bodies and increased inflammatory cells in sinu... |
000000046 | TCGA-22-1016-01Z-00-DX1.807510FD-222D-4E65-B261-3EB0815F8A50_53824_13760.png | [
{
"from": "human",
"value": "<image>\nPresent a compact description of the photo’s key features."
},
{
"from": "gpt",
"value": "The lung tissue features prominent hemorrhage with dense red blood cells, accompanied by an active inflammatory response indicated by neutrophils, lymphocytes, and macr... |
000000047 | TCGA-KL-8336-01Z-00-DX1.bfba9373-efa8-4573-8ee6-8ac961f0b65a_82688_6944.png | [
{
"from": "human",
"value": "<image>\nPresent a compact description of the photo’s key features."
},
{
"from": "gpt",
"value": "The microscopic renal tissue image displays clear cytoplasm in cells, indicative of clear cell renal cell carcinoma (RCC). Features include round to oval nuclei, anisok... |
000000048 | TCGA-A8-A075-01Z-00-DX1.8E06AF51-951F-48E8-934E-42A455F65E5F_25696_19200.png | [
{
"from": "human",
"value": "<image>\nWrite a terse but informative summary of the picture."
},
{
"from": "gpt",
"value": "Microscopic analysis reveals tissue with high cell density and pleomorphism, hyperchromatic nuclei, and prominent nucleoli, indicating increased activity. The tissue archite... |
000000049 | TCGA-AR-A24X-01Z-00-DX1.304BF142-B01A-4AE9-B98C-FB3DE3BEAE57_39520_5184.png | [
{
"from": "human",
"value": "<image>\nOffer a succinct explanation of the picture presented."
},
{
"from": "gpt",
"value": "The breast tissue image shows a dense, eosinophilic stroma rich in collagen, with irregular, variably sized duct-like structures lined by uniform epithelial cells. No high-... |
000000050 | TCGA-BP-4162-01Z-00-DX1.cb017dff-4a35-4e33-92a7-2006973ad6bf_78400_59584.png | [
{
"from": "human",
"value": "<image>\nGive a short and clear explanation of the subsequent image."
},
{
"from": "gpt",
"value": "The renal tissue section displays renal tubules containing pink-staining material, indicating potential tubular damage or protein reabsorption. The interstitial space ... |
000000051 | TCGA-FD-A5BT-01Z-00-DX1.2A4716E6-A5C0-4C69-82FD-E771ABB3B28D_44896_39456.png | [
{
"from": "human",
"value": "Give a short and clear explanation of the subsequent image.\n<image>"
},
{
"from": "gpt",
"value": "The image reveals a central vessel with a thickened wall and an occlusive thrombus, indicative of thrombosis. Infiltration by inflammatory cells within the vessel wall... |
000000052 | TCGA-23-1121-01Z-00-DX1.E2F25441-32C3-46BF-A845-CB4FA787E8CB_30112_52320.png | [
{
"from": "human",
"value": "Render a clear and concise summary of the photo.\n<image>"
},
{
"from": "gpt",
"value": "The tissue section likely from the ovary's stroma displays varied cells, some with large nuclei and visible nucleoli, suggesting activity. Smaller, dark-staining nuclei indicate ... |
000000053 | TCGA-DU-A5TS-01Z-00-DX1.FD62A1B8-0B55-4441-B650-9A8C7AEC8859_11456_3776.png | [
{
"from": "human",
"value": "<image>\nWrite a terse but informative summary of the picture."
},
{
"from": "gpt",
"value": "The brain tissue section, stained with H&E, displays well-preserved cellular architecture with no evident abnormalities. Features include neurons with central nuclei, densel... |
000000054 | TCGA-DD-A4NA-01Z-00-DX1.A193ECEA-57FB-4313-9D45-47509B1B502E_49568_35968.png | [
{
"from": "human",
"value": "<image>\nShare a concise interpretation of the image provided."
},
{
"from": "gpt",
"value": "The liver tissue displays a dense infiltrate of medium to large cells with irregular nuclei, prominent nucleoli, and moderate cytoplasm, suggesting a lymphoproliferative dis... |
000000055 | TCGA-HC-7741-01Z-00-DX1.77D97B8B-ECAB-4BB3-97F3-67BFE05E7F54_30688_16800.png | [
{
"from": "human",
"value": "<image>\nProvide a brief description of the given image."
},
{
"from": "gpt",
"value": "The prostate tissue image displays glandular structures with epithelial atypia amidst fibromuscular stroma, typical of prostate glands. No signs of invasive malignancy are evident... |
000000056 | TCGA-A7-A3IY-01Z-00-DX1.B4E75265-3B2A-456C-996A-F95B5A645BF8_29408_14272.png | [
{
"from": "human",
"value": "Write a terse but informative summary of the picture.\n<image>"
},
{
"from": "gpt",
"value": "The tissue shows vascular channels with \"hobnail\" endothelial cells and blood-filled lumens. The surrounding myxoid stroma contains hyperchromatic, possibly neoplastic cel... |
000000057 | TCGA-GU-A767-01Z-00-DX1.A8B13490-D25A-45E1-A2D8-02125DB3A6B2_45984_62048.png | [
{
"from": "human",
"value": "Relay a brief, clear account of the picture shown.\n<image>"
},
{
"from": "gpt",
"value": "The image shows a section of tissue with disorganized, elongated, spindle-shaped cells resembling smooth muscle or myofibroblasts. Features include eosinophilic cytoplasm, a co... |
000000058 | TCGA-DU-7009-01Z-00-DX1.EAAC2D49-EFA4-48B1-97D9-5387C25155C4_20608_19424.png | [
{
"from": "human",
"value": "Provide a brief description of the given image.\n<image>"
},
{
"from": "gpt",
"value": "The brain tissue section exhibits normal morphology with well-preserved architecture, showing differentiated neurons with prominent nuclei and supportive glial cells. No pathologi... |
000000059 | TCGA-A3-A6NN-01Z-00-DX1.4769C9A7-02D2-4080-8AA1-CD34F11CB344_33056_10208.png | [
{
"from": "human",
"value": "<image>\nRender a clear and concise summary of the photo."
},
{
"from": "gpt",
"value": "The renal tissue image displays a renal tubule with epithelial lining, and significant extracellular pigmentation in the interstitium, suggesting a pathological deposition. Varia... |
000000060 | TCGA-A6-5666-01Z-00-DX1.6f2cf971-edcb-415d-9709-feb7422cddc4_4128_39712.png | [
{
"from": "human",
"value": "Present a compact description of the photo’s key features.\n<image>"
},
{
"from": "gpt",
"value": "The colon tissue image displays glandular epithelial dysplasia, characterized by pleomorphic, hyperchromatic nuclei, prominent nucleoli, and disrupted glandular archite... |
000000061 | TCGA-44-6148-01Z-00-DX1.94c29c83-1085-458f-a0c9-3ffa8592cb98_64096_27584.png | [
{
"from": "human",
"value": "Relay a brief, clear account of the picture shown.\n<image>"
},
{
"from": "gpt",
"value": "The lung tissue image reveals multiple blood vessels with red blood cells, surrounded by alveolar spaces and septa with pneumocytes. Notable interstitial thickening suggests po... |
000000062 | TCGA-GU-AATQ-01Z-00-DX1.6D436809-1238-44CA-9CFC-03DC2277C192_10464_52960.png | [
{
"from": "human",
"value": "Present a compact description of the photo’s key features.\n<image>"
},
{
"from": "gpt",
"value": "The tissue section shows eosinophilic material, likely connective tissue or muscle, interspersed with variably sized nucleated cells, suggesting epithelial or inflammat... |
000000063 | TCGA-78-7148-01Z-00-DX1.aac94f79-77f2-45e6-b0c3-0b103fecbb22_80544_66112.png | [
{
"from": "human",
"value": "Summarize the visual content of the image.\n<image>"
},
{
"from": "gpt",
"value": "The lung tissue exhibits irregular alveolar spaces lined by reactive pneumocytes with increased cytoplasm, suggesting a response to stimuli like inflammation or infection. Interstitial... |
000000064 | TCGA-B0-5713-01Z-00-DX1.afdee2d7-be99-4a3f-addf-b4942b891e7a_62496_6848.png | [
{
"from": "human",
"value": "Present a compact description of the photo’s key features.\n<image>"
},
{
"from": "gpt",
"value": "The image features a renal glomerulus with capillaries displaying thin endothelial walls. Red blood cells are visible within these capillaries. The surrounding fibrous ... |
000000065 | TCGA-GV-A3JX-01Z-00-DX1.36A00B8A-662D-43EE-AB52-CBBBF373BCFF_54880_45120.png | [
{
"from": "human",
"value": "<image>\nRender a clear and concise summary of the photo."
},
{
"from": "gpt",
"value": "The tissue image displays pleomorphism, hyperchromatic nuclei, high nuclear-to-cytoplasmic ratio, and prominent nucleoli, with disorganized architecture and densely packed cells.... |
000000066 | TCGA-AA-A01K-01Z-00-DX1.2E147232-BC3C-48CC-B75E-43E6AA4A0BF8_5472_35200.png | [
{
"from": "human",
"value": "<image>\nShare a concise interpretation of the image provided."
},
{
"from": "gpt",
"value": "The colon tissue image reveals glandular structures with columnar epithelial cells and basal nuclei. There is an inflammatory mononuclear cell infiltrate in the lamina propr... |
000000067 | TCGA-AN-A046-01Z-00-DX1.C529B94F-AFE3-4701-BC98-5D6EDF7B82C0_18752_18944.png | [
{
"from": "human",
"value": "<image>\nRender a clear and concise summary of the photo."
},
{
"from": "gpt",
"value": "The breast tissue image displays disrupted architecture with dense, atypical cells having large, hyperchromatic nuclei, high nuclear-to-cytoplasmic ratios, and scattered collagen... |
000000068 | TCGA-V1-A9O7-01Z-00-DX1.FED3BDE1-B135-47B5-8B39-54F27C228804_65568_44736.png | [
{
"from": "human",
"value": "<image>\nWrite a terse but informative summary of the picture."
},
{
"from": "gpt",
"value": "The prostate tissue image shows well-differentiated glandular structures with typical variability in size and shape. Glands are lined by epithelial cells with prominent nucl... |
000000069 | TCGA-HC-7745-01Z-00-DX1.50e87666-fdf5-4a68-a679-6fb3c770513e_47104_21280.png | [
{
"from": "human",
"value": "<image>\nProvide a brief description of the given image."
},
{
"from": "gpt",
"value": "The prostate tissue displays glandular structures with irregular shapes and epithelial cells showing prominent nucleoli, indicative of prostatic adenocarcinoma. Features include c... |
000000070 | TCGA-Z7-A8R6-01Z-00-DX1.CE4ED818-D762-4324-9DEA-2ACB38B9B0B9_72224_39584.png | [
{
"from": "human",
"value": "Create a compact narrative representing the image presented.\n<image>"
},
{
"from": "gpt",
"value": "The tissue section exhibits pleomorphic cells with hyperchromatic, enlarged nuclei and prominent nucleoli, indicating high mitotic activity. The absence of normal duc... |
000000071 | TCGA-39-5031-01Z-00-DX1.f9264b3b-9fdf-4fb7-8752-2d3ffd3de3ea_6048_30464.png | [
{
"from": "human",
"value": "<image>\nCreate a compact narrative representing the image presented."
},
{
"from": "gpt",
"value": "The lung tissue exhibits disrupted architecture with lost alveolar structure and fibrin deposition, indicating acute inflammation. Numerous darkly stained nuclei sugg... |
000000072 | TCGA-AA-3542-01Z-00-DX1.db284d9a-bde5-471c-ac37-5f3216d0f077_8000_14048.png | [
{
"from": "human",
"value": "Provide a brief description of the given image.\n<image>"
},
{
"from": "gpt",
"value": "The colon tissue exhibits glandular structures with epithelial nuclear atypia, including varied nuclear size and prominent nucleoli. Gland crowding and architectural complexity su... |
000000073 | TCGA-FG-A6IZ-01Z-00-DX1.4E27D4BA-5E6C-4E51-97F4-5EE6148A4F29_30048_33696.png | [
{
"from": "human",
"value": "<image>\nCreate a compact narrative representing the image presented."
},
{
"from": "gpt",
"value": "The tissue section shows a high nucleus-to-cytoplasm ratio, prominent nucleoli, cellular and nuclear pleomorphism, and pink-staining neuropil, indicating brain tissue... |
000000074 | TCGA-A8-A09G-01Z-00-DX1.B834728C-DAC5-4463-961D-7E3B220905C1_51136_20352.png | [
{
"from": "human",
"value": "Give a short and clear explanation of the subsequent image.\n<image>"
},
{
"from": "gpt",
"value": "The microscopic image shows a section of tissue with spindle-shaped cells and elongated nuclei, arranged in a disorganized pattern within a collagen-rich stroma. The v... |
000000075 | TCGA-W5-AA2O-01Z-00-DX1.2A089837-4C85-492B-8EB3-F7C51B8ADF55_82048_62208.png | [
{
"from": "human",
"value": "<image>\nCreate a compact narrative representing the image presented."
},
{
"from": "gpt",
"value": "The microscopic image reveals cells with pleomorphism, varying in size and shape, having hyperchromatic and enlarged nuclei with prominent nucleoli, and a disrupted d... |
000000076 | TCGA-BJ-A0YZ-01Z-00-DX1.FFDC24FB-D8A1-40F8-89CD-DDB0ED010870_52960_62752.png | [
{
"from": "human",
"value": "Offer a succinct explanation of the picture presented.\n<image>"
},
{
"from": "gpt",
"value": "The tissue image displays healthy skeletal muscle with well-organized, elongated muscle fibers showing peripheral nuclei and prominent striations indicative of sarcomeres. ... |
000000077 | TCGA-AY-6197-01Z-00-DX1.AD42F96E-6583-4AB8-A6BD-C8334EA9DE14_102880_46624.png | [
{
"from": "human",
"value": "Present a compact description of the photo’s key features.\n<image>"
},
{
"from": "gpt",
"value": "The tissue section exhibits glandular dysplasia with high nuclear to cytoplasmic ratios, hyperchromatic and stratified nuclei, and disrupted glandular architecture. Gla... |
000000078 | TCGA-53-7813-01Z-00-DX1.97c5eff3-ceeb-499b-b2e1-bcd3cd60c5e7_21504_27968.png | [
{
"from": "human",
"value": "<image>\nRender a clear and concise summary of the photo."
},
{
"from": "gpt",
"value": "The tissue section shows hyperchromatic, pleomorphic nuclei with a high nuclear-to-cytoplasmic ratio, and eosinophilic cytoplasm. Lack of normal lung tissue architecture and vari... |
000000079 | TCGA-55-7910-01Z-00-DX1.041e15d5-4852-49f6-85d9-74b510497651_60800_60224.png | [
{
"from": "human",
"value": "<image>\nPresent a compact description of the photo’s key features."
},
{
"from": "gpt",
"value": "The lung tissue exhibits hyperchromatic, pleomorphic nuclei, eosinophilic cytoplasm, and dense cellular packing. Alveolar spaces are irregular, lined by atypical cells,... |
000000080 | TCGA-G3-AAV4-01Z-00-DX1.D62F997C-F97A-47FB-BE0D-1A2B18E861A0_28064_40192.png | [
{
"from": "human",
"value": "Provide a brief description of the given image.\n<image>"
},
{
"from": "gpt",
"value": "The tissue image displays spindle-shaped cells with elongated nuclei and moderate eosinophilic cytoplasm, arranged in a fascicular pattern typical of mesenchymal origin, possibly ... |
000000081 | TCGA-05-4430-01Z-00-DX1.95659bbb-3091-4370-bc1d-6c6c1baa7b3d_27328_27264.png | [
{
"from": "human",
"value": "Share a concise interpretation of the image provided.\n<image>"
},
{
"from": "gpt",
"value": "The lung tissue section shows hyaline membranes in alveoli, indicating acute lung injury. Alveolar walls are thickened with pneumocyte hyperplasia, suggestive of repair effo... |
000000082 | TCGA-B9-A5W8-01Z-00-DX1.4AF63260-F90E-4F41-83E6-BC5FBC7F71ED_158912_10880.png | [
{
"from": "human",
"value": "Offer a succinct explanation of the picture presented.\n<image>"
},
{
"from": "gpt",
"value": "The renal tissue section displays severe pleomorphism, hyperchromatic and irregular nuclei, giant cells, prominent nucleoli, and eosinophilic cytoplasm. Disrupted architect... |
000000083 | TCGA-FD-A6TK-01Z-00-DX1.B685DA87-72A6-4C38-8AA1-40B6E543383C_96640_63008.png | [
{
"from": "human",
"value": "Render a clear and concise summary of the photo.\n<image>"
},
{
"from": "gpt",
"value": "The tissue image shows well-organized, elongated, spindle-shaped smooth muscle cells in bundles typical of the bladder's detrusor muscle. Cells feature centrally or peripherally ... |
000000084 | TCGA-43-2581-01Z-00-DX1.0d1203cf-9ac9-49a2-8bd0-063ceae7b1d3_7040_19776.png | [
{
"from": "human",
"value": "<image>\nOffer a succinct explanation of the picture presented."
},
{
"from": "gpt",
"value": "The image reveals a cluster of cohesive, neoplastic cells with high nucleus-to-cytoplasm ratios, prominent nucleoli, and eosinophilic cytoplasm. These cells exhibit basophi... |
000000085 | TCGA-ET-A2N1-01Z-00-DX1.309AAE0C-349D-43C7-8EE2-1B9D0E8104DB_8224_18944.png | [
{
"from": "human",
"value": "Render a clear and concise summary of the photo.\n<image>"
},
{
"from": "gpt",
"value": "The tissue section shows pleomorphic, hyperchromatic nuclei with high nuclear-to-cytoplasmic ratios, and prominent nucleoli, indicating a neoplastic process. The absence of norma... |
000000086 | TCGA-AO-A1KR-01Z-00-DX1.BFB2E69B-E23C-4542-9CBF-EDD040B985AC_19584_17472.png | [
{
"from": "human",
"value": "Create a compact narrative representing the image presented.\n<image>"
},
{
"from": "gpt",
"value": "The microscopic breast tissue image reveals densely packed cells with a high nucleus-to-cytoplasm ratio, nuclear pleomorphism, and hyperchromasia, surrounded by react... |
000000087 | TCGA-21-5782-01Z-00-DX1.E0C856C0-9055-4437-9393-695D699E4F57_34528_59680.png | [
{
"from": "human",
"value": "<image>\nProvide a brief description of the given image."
},
{
"from": "gpt",
"value": "The lung tissue exhibits alveolar atelectasis with collapsed airspaces, thin alveolar walls lined by flattened pneumocytes, and interstitial inflammation suggesting a pathological... |
000000088 | TCGA-86-8278-01Z-00-DX1.6500afef-f0f0-4e7c-a6c0-60da81993641_43968_15232.png | [
{
"from": "human",
"value": "Present a compact description of the photo’s key features.\n<image>"
},
{
"from": "gpt",
"value": "The lung biopsy reveals spindle-shaped cells with elongated nuclei and moderate eosinophilic cytoplasm, arranged in a fascicular pattern within a collagenous stroma, in... |
000000089 | TCGA-EW-A6S9-01Z-00-DX1.4A8CD2D4-D528-465C-82DC-9CAE35DD424B_89728_64576.png | [
{
"from": "human",
"value": "Provide a brief description of the given image.\n<image>"
},
{
"from": "gpt",
"value": "The microscopic image of breast tissue shows a normal vascular structure surrounded by concentric layers of fibrous connective tissue, typical of a perivascular arrangement. The v... |
000000090 | TCGA-6D-AA2E-01Z-00-DX1.81E7420E-9C8B-4076-A604-F2B2AD3340D5_23520_28192.png | [
{
"from": "human",
"value": "Share a concise interpretation of the image provided.\n<image>"
},
{
"from": "gpt",
"value": "The tissue exhibits dense, disorganized cells with high nuclear-to-cytoplasmic ratios and hyperchromatic nuclei, minimal visible cytoplasm, and indistinct borders. Tightly p... |
000000091 | TCGA-DJ-A3VF-01Z-00-DX1.96025060-08FB-457A-838B-008C081AA90C_17600_39232.png | [
{
"from": "human",
"value": "Share a concise interpretation of the image provided.\n<image>"
},
{
"from": "gpt",
"value": "The tissue image displays dense, pink-staining collagen suggestive of fibrosis, interspersed with dark-staining nuclei indicative of inflammatory cells, likely lymphocytes o... |
000000092 | TCGA-VS-A952-01Z-00-DX1.3C30EAEB-6231-4913-B63D-A06954BB717F_19392_5152.png | [
{
"from": "human",
"value": "<image>\nProvide a brief description of the given image."
},
{
"from": "gpt",
"value": "The tissue section shows densely packed cells with hyperchromatic, pleomorphic nuclei and a high nuclear-to-cytoplasmic ratio, arranged in glandular/papillary structures. An infla... |
000000093 | TCGA-FB-AAQ0-01Z-00-DX1.8F17745D-098C-4D3A-95A1-16A3AC437CD8_23648_17728.png | [
{
"from": "human",
"value": "Write a terse but informative summary of the picture.\n<image>"
},
{
"from": "gpt",
"value": "The microscopic image of pancreatic tissue shows a pink-staining connective tissue matrix with fibroblasts and potential inflammatory cells. The irregular architecture and d... |
000000094 | TCGA-EW-A1P1-01Z-00-DX1.4B670029-4B3B-4D76-8EA4-F4F29EEF9E37_49088_23936.png | [
{
"from": "human",
"value": "Provide a brief description of the given image.\n<image>"
},
{
"from": "gpt",
"value": "The breast tissue image shows pleomorphic cells with high nuclear-to-cytoplasmic ratios, hyperchromatic and irregular nuclei, prominent nucleoli, and disorganized structure, sugge... |
000000095 | TCGA-56-8623-01Z-00-DX1.119C11E2-16E4-48A9-B8BD-6F1E8CBFEBA1_56896_48608.png | [
{
"from": "human",
"value": "<image>\nGive a short and clear explanation of the subsequent image."
},
{
"from": "gpt",
"value": "The tissue image exhibits elongated, spindle-shaped cells with elongated nuclei, typical of smooth muscle cells or myofibroblasts, in interlacing bundles. There is a p... |
000000096 | TCGA-AR-A2LN-01Z-00-DX1.3EF43524-28B8-4326-9356-6BCBC63A1DA8_18272_32160.png | [
{
"from": "human",
"value": "Render a clear and concise summary of the photo.\n<image>"
},
{
"from": "gpt",
"value": "The tissue image displays clusters of cells with a high nuclear-to-cytoplasmic ratio and pleomorphic, hyperchromatic nuclei with visible nucleoli, indicating malignancy. The cell... |
000000097 | TCGA-XK-AAJ3-01Z-00-DX1.48C36FDF-232A-49BC-AAB5-4B8BFB215743_91584_19616.png | [
{
"from": "human",
"value": "<image>\nGive a short and clear explanation of the subsequent image."
},
{
"from": "gpt",
"value": "The microscopic image reveals cells with pleomorphism, enlarged, hyperchromatic nuclei, and prominent nucleoli, suggesting increased nuclear to cytoplasmic ratios. The... |
000000098 | TCGA-EJ-5517-01Z-00-DX1.7df66a54-404a-4b7d-a316-4ae6383c3afd_109760_32192.png | [
{
"from": "human",
"value": "Summarize the visual content of the image.\n<image>"
},
{
"from": "gpt",
"value": "The microscopic image depicts benign prostatic tissue with glandular epithelium featuring columnar to cuboidal cells with basally located, round to oval nuclei. The cytoplasm is eosino... |
000000099 | TCGA-FG-6691-01Z-00-DX1.d5e614cf-985b-4ca1-9ded-4ff57e938df1_111232_60608.png | [
{
"from": "human",
"value": "<image>\nDescribe the image concisely."
},
{
"from": "gpt",
"value": "The brain tissue exhibits high-grade glioma characteristics, including hyperchromatic, pleomorphic nuclei, prominent nucleoli, and disrupted tissue architecture. The H&E stain highlights an irregul... |
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