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diff --git a/app.py b/app.py index <HASH>..<HASH> 100644 --- a/app.py +++ b/app.py @@ -11,6 +11,7 @@ import json import base64 import hashlib import sys +import time app_root = Path(__file__).parent @@ -95,6 +96,7 @@ class BaseView(HTTPMethodView): except KeyError: as_json = False ...
Include took_ms in JSON output
py
diff --git a/chassis/services/dependency_injection/__init__.py b/chassis/services/dependency_injection/__init__.py index <HASH>..<HASH> 100644 --- a/chassis/services/dependency_injection/__init__.py +++ b/chassis/services/dependency_injection/__init__.py @@ -33,7 +33,16 @@ def _check_type(name, obj, expected_type): ...
Add additional comment on _import_module to show example __import__ call
py
diff --git a/tools/run_tests/run_microbenchmark.py b/tools/run_tests/run_microbenchmark.py index <HASH>..<HASH> 100755 --- a/tools/run_tests/run_microbenchmark.py +++ b/tools/run_tests/run_microbenchmark.py @@ -199,8 +199,7 @@ argp.add_argument('-c', '--collect', default=sorted(collectors.keys()), ...
Move trickle to the end: it takes a while, and its less important (in the face of failures)
py
diff --git a/kconfiglib.py b/kconfiglib.py index <HASH>..<HASH> 100644 --- a/kconfiglib.py +++ b/kconfiglib.py @@ -5479,7 +5479,12 @@ class Variable(object): class KconfigError(Exception): - "Exception raised for Kconfig-related errors" + """ + Exception raised for Kconfig-related errors. + + KconfigEr...
Clarify that KconfigSyntaxError = KconfigError in the docs KconfigSyntaxError is just an older (bad) name. pydoc generates confusing documentation due to the "KconfigSyntaxError = KconfigError" assignment, so mention it in the docstring.
py
diff --git a/visio2img/visio2img.py b/visio2img/visio2img.py index <HASH>..<HASH> 100644 --- a/visio2img/visio2img.py +++ b/visio2img/visio2img.py @@ -76,7 +76,16 @@ class VisioFile(object): raise OSError(msg) try: - self.app.Documents.Open(visio_pathname) + if hasattr(self...
Use OpenEx when available with visOpenCopy and visOpenRO flags Using OpenEx with visOpenCopy and visOpenRO flags allows visio2img to open a vsd even if another visio instance has the file already opened.
py
diff --git a/tests/cases/item_test.py b/tests/cases/item_test.py index <HASH>..<HASH> 100644 --- a/tests/cases/item_test.py +++ b/tests/cases/item_test.py @@ -621,6 +621,9 @@ class ItemTestCase(base.TestCase): 'text': 'copied_item'}) self.assertStatusOk(resp) self....
Add test to ensure that copyOfItem is correct
py
diff --git a/bulbs/content/serializers.py b/bulbs/content/serializers.py index <HASH>..<HASH> 100644 --- a/bulbs/content/serializers.py +++ b/bulbs/content/serializers.py @@ -1,5 +1,5 @@ from django import forms -from django.contrib.auth.models import User +from django.contrib import auth from rest_framework import s...
Updated bulbs serializers to use custom auth model
py
diff --git a/condoor/protocols/telnet.py b/condoor/protocols/telnet.py index <HASH>..<HASH> 100644 --- a/condoor/protocols/telnet.py +++ b/condoor/protocols/telnet.py @@ -69,7 +69,7 @@ class Telnet(Protocol): logger.debug("EXPECTED_PROMPT={}".format(pattern_to_str(self.device.prompt_re))) # setting ma...
Increasing max_transition to handle ascii art prompts
py
diff --git a/code/png.py b/code/png.py index <HASH>..<HASH> 100755 --- a/code/png.py +++ b/code/png.py @@ -1465,6 +1465,17 @@ class Reader: All the other aspects of the image data (bit depth for example) are not changed. + + .. note:: + + When the source image is greyscale, has bit d...
Added note to asDirect and fixed bug in pngsuite_image. git-svn-id: <URL>
py
diff --git a/tests/test_generators.py b/tests/test_generators.py index <HASH>..<HASH> 100644 --- a/tests/test_generators.py +++ b/tests/test_generators.py @@ -176,7 +176,9 @@ class TestGenerators(unittest.TestCase): test_file_reshaped = test_file.reshape( int(test_file.shape[0]), int(test_file.sha...
chg: [test] trying assert_allclose instead of assert_array_equal.
py
diff --git a/sqlparse/tokens.py b/sqlparse/tokens.py index <HASH>..<HASH> 100644 --- a/sqlparse/tokens.py +++ b/sqlparse/tokens.py @@ -13,15 +13,6 @@ class _TokenType(tuple): parent = None - def split(self): - buf = [] - node = self - while node is not None: - buf.append(node)...
Remove unused code from tokens.py
py
diff --git a/squad/plugins/__init__.py b/squad/plugins/__init__.py index <HASH>..<HASH> 100644 --- a/squad/plugins/__init__.py +++ b/squad/plugins/__init__.py @@ -111,6 +111,24 @@ class Plugin(object): """ pass + def notify_patch_build_created(self, build): + """ + This method is ca...
plugins: add API for patch source notifications This will be called to trigger notifications about build status to Gerrit/Github/etc.
py
diff --git a/src/scs_core/sys/node.py b/src/scs_core/sys/node.py index <HASH>..<HASH> 100644 --- a/src/scs_core/sys/node.py +++ b/src/scs_core/sys/node.py @@ -59,7 +59,7 @@ class Node(ABC): @staticmethod - def ping(host, timeout=1): + def ping(host, timeout=1.0): p = Popen(['ping', '-q', '-c', '...
Added server_ipv4_address to Host
py
diff --git a/pyte/screens.py b/pyte/screens.py index <HASH>..<HASH> 100644 --- a/pyte/screens.py +++ b/pyte/screens.py @@ -999,6 +999,8 @@ class HistoryScreen(DiffScreen): self.ensure_width() + self.dirty = set(range(self.lines)) + def next_page(self): """Moves the screen page ...
Fixed a bug in `HistoryScreen` -- DiffScreen.dirty attribute wasn't updated
py
diff --git a/tests/test_s3_calling_format.py b/tests/test_s3_calling_format.py index <HASH>..<HASH> 100644 --- a/tests/test_s3_calling_format.py +++ b/tests/test_s3_calling_format.py @@ -288,4 +288,5 @@ def test_cipher_suites(): # harmlessly, but do the simple thing and insist on an exact match # for now. ...
Allow new ECDHE cipher suite in test
py
diff --git a/ricecooker/__main__.py b/ricecooker/__main__.py index <HASH>..<HASH> 100644 --- a/ricecooker/__main__.py +++ b/ricecooker/__main__.py @@ -83,7 +83,7 @@ if __name__ == '__main__': compress=arguments['--compress'], **kwargs) except Exception as e: - c...
Remote logs via websockets: renaming critical stage from ERROR to FAILURE.
py
diff --git a/spade/container.py b/spade/container.py index <HASH>..<HASH> 100644 --- a/spade/container.py +++ b/spade/container.py @@ -14,7 +14,7 @@ from .message import Message logger = logging.getLogger("SPADE") # check if python is 3.6 or higher -if sys.version_info < (3, 7) and sys.platform == "win32": +if sys....
make last check being >=<I>
py
diff --git a/salt/auth/pam.py b/salt/auth/pam.py index <HASH>..<HASH> 100644 --- a/salt/auth/pam.py +++ b/salt/auth/pam.py @@ -19,6 +19,8 @@ authenticated against. This defaults to `login` auth.pam.service: login +.. note:: Solaris-like (SmartOS, OmniOS, ...) systems may need ``auth.pam.service`` set to ``oth...
update salt.auth.pam documentation in relation to Solaris #<I>
py
diff --git a/cassandra/cluster.py b/cassandra/cluster.py index <HASH>..<HASH> 100644 --- a/cassandra/cluster.py +++ b/cassandra/cluster.py @@ -68,7 +68,7 @@ class ResponseFuture(object): # off if send_request() is called multiple times for host in self.query_plan: req_id = self._query(hos...
Correctly handle request IDs of 0
py
diff --git a/cacheback/base.py b/cacheback/base.py index <HASH>..<HASH> 100644 --- a/cacheback/base.py +++ b/cacheback/base.py @@ -5,6 +5,7 @@ import time from django.conf import settings from django.core.cache import DEFAULT_CACHE_ALIAS +from django.db.models import Model as DjangoModel from django.utils import s...
Refs #<I> - added handling of Django Model instances out of the box
py
diff --git a/thingstance/stores/mongodb.py b/thingstance/stores/mongodb.py index <HASH>..<HASH> 100644 --- a/thingstance/stores/mongodb.py +++ b/thingstance/stores/mongodb.py @@ -14,15 +14,15 @@ class MongoStore(Store): client = MongoClient() db = client[database] self.db = db - ...
Refactored mongo collection name
py
diff --git a/tests/test_library.py b/tests/test_library.py index <HASH>..<HASH> 100644 --- a/tests/test_library.py +++ b/tests/test_library.py @@ -28,10 +28,30 @@ def test_recently_added(): assert items[0].title == "TRON: Legacy" assert items[0].year == 2010 + assert items[0].director.tag == "Joseph Kosi...
Extended recently_added() "movie" test
py
diff --git a/Lib/fontParts/base/glyph.py b/Lib/fontParts/base/glyph.py index <HASH>..<HASH> 100644 --- a/Lib/fontParts/base/glyph.py +++ b/Lib/fontParts/base/glyph.py @@ -13,6 +13,10 @@ from fontParts.base.color import Color class BaseGlyph(BaseObject, TransformationMixin): + """ + Glyph object. + """...
Token checkin for glyph docs There is a tonne of documentation here already!?
py
diff --git a/noseprogressive/tests/test_utils.py b/noseprogressive/tests/test_utils.py index <HASH>..<HASH> 100644 --- a/noseprogressive/tests/test_utils.py +++ b/noseprogressive/tests/test_utils.py @@ -17,6 +17,7 @@ class UtilsTests(TestCase): def test_frame_of_test_null_file(self): """Make sure frame_of...
Bring test_frame_of_test_null_file up to date with new signature of frame_of_test().
py
diff --git a/dcompiler.py b/dcompiler.py index <HASH>..<HASH> 100755 --- a/dcompiler.py +++ b/dcompiler.py @@ -679,12 +679,13 @@ class DMDDCompiler(DCompiler): return '' def library_dir_option(self, dir): - self.warn("Don't know how to set library search path for DMD.") - #raise Distut...
add dmd library_dir support
py
diff --git a/deepdish/io/hdf5io.py b/deepdish/io/hdf5io.py index <HASH>..<HASH> 100644 --- a/deepdish/io/hdf5io.py +++ b/deepdish/io/hdf5io.py @@ -12,7 +12,7 @@ except ImportError: from deepdish import six -IO_VERSION = 6 +IO_VERSION = 7 DEEPDISH_IO_VERSION_STR = 'DEEPDISH_IO_VERSION' # Types that should be sa...
Updated IO version after adding pandas support
py
diff --git a/pypeerassets/main.py b/pypeerassets/main.py index <HASH>..<HASH> 100644 --- a/pypeerassets/main.py +++ b/pypeerassets/main.py @@ -98,7 +98,7 @@ def find_card_transfers(provider, deck: Deck) -> list: '''find all <deck> card transfers''' cards = [] - card_transfers = (provider.getrawtransactio...
find_card_transfers fix that small bug.
py
diff --git a/spockbot/plugins/helpers/chat.py b/spockbot/plugins/helpers/chat.py index <HASH>..<HASH> 100644 --- a/spockbot/plugins/helpers/chat.py +++ b/spockbot/plugins/helpers/chat.py @@ -130,7 +130,10 @@ class ChatPlugin(PluginBase): # sender UUID try: # always at the same place if present - ...
Fixed uuid grabber in some cases the uuid may not be at the beginning of the string, so I added a splitter to find it correctly.
py
diff --git a/internetarchive/config.py b/internetarchive/config.py index <HASH>..<HASH> 100644 --- a/internetarchive/config.py +++ b/internetarchive/config.py @@ -103,11 +103,9 @@ def parse_config_file(config_file=None): config = configparser.RawConfigParser() if not config_file: - config_dir = os.pa...
Read from ~/.config/ia.ini with fallback to ~/.ia regardless of the existence of ~/.config
py
diff --git a/discord/message.py b/discord/message.py index <HASH>..<HASH> 100644 --- a/discord/message.py +++ b/discord/message.py @@ -53,9 +53,9 @@ class Attachment: size: :class:`int` The attachment size in bytes. height: Optional[:class:`int`] - The attachment's height, in pixels. Only appl...
Update attachment documentation for width/height applying to videos too
py
diff --git a/source/rafcon/mvc/controllers/graphical_editor_gaphas.py b/source/rafcon/mvc/controllers/graphical_editor_gaphas.py index <HASH>..<HASH> 100644 --- a/source/rafcon/mvc/controllers/graphical_editor_gaphas.py +++ b/source/rafcon/mvc/controllers/graphical_editor_gaphas.py @@ -172,8 +172,12 @@ class GraphicalE...
Perform canvas update before pasting a state
py
diff --git a/jsonextended/utils.py b/jsonextended/utils.py index <HASH>..<HASH> 100644 --- a/jsonextended/utils.py +++ b/jsonextended/utils.py @@ -252,6 +252,10 @@ class MockPath(object): def is_dir(self): return self._is_dir + @property + def parent(self): + return MockPath(os.path.dirname...
added standard parent and str access to MockPath
py
diff --git a/mwreverts/about.py b/mwreverts/about.py index <HASH>..<HASH> 100644 --- a/mwreverts/about.py +++ b/mwreverts/about.py @@ -1,5 +1,5 @@ __name__ = "mwreverts" -__version__ = "0.1.2" +__version__ = "0.1.3" __author__ = "Aaron Halfaker" __author_email__ = "aaron.halfaker@gmail.com" __description__ = "A set...
Increments version to <I>
py
diff --git a/ReText/window.py b/ReText/window.py index <HASH>..<HASH> 100644 --- a/ReText/window.py +++ b/ReText/window.py @@ -55,7 +55,11 @@ class ReTextWindow(QMainWindow): def __init__(self, parent=None): QMainWindow.__init__(self, parent) self.resize(950, 700) - screenRect = self.screen().geometry() + qAp...
Use fallback code to obtain screen size for Qt < <I>
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -7,7 +7,7 @@ except ImportError: setup( name='django-userlog', - version='0.2', + version='0.2.1', description='A django apps to record user log in ip addresses and user agent', author='Tamas Szabo', ...
Bumps version number to <I>.
py
diff --git a/python/herald/remote/herald_jsonrpc.py b/python/herald/remote/herald_jsonrpc.py index <HASH>..<HASH> 100644 --- a/python/herald/remote/herald_jsonrpc.py +++ b/python/herald/remote/herald_jsonrpc.py @@ -1,7 +1,8 @@ #!/usr/bin/env python # -- Content-Encoding: UTF-8 -- """ -Pelix remote services implement...
Code reformated according to PEP8
py
diff --git a/staticjinja/__init__.py b/staticjinja/__init__.py index <HASH>..<HASH> 100644 --- a/staticjinja/__init__.py +++ b/staticjinja/__init__.py @@ -3,4 +3,4 @@ from __future__ import absolute_import -from .staticjinja import Reloader, Renderer +from .staticjinja import Reloader, Renderer, make_renderer
We also need import staticjinja to expose make_renderer
py
diff --git a/tests/test_simulated_annealing.py b/tests/test_simulated_annealing.py index <HASH>..<HASH> 100644 --- a/tests/test_simulated_annealing.py +++ b/tests/test_simulated_annealing.py @@ -18,6 +18,7 @@ import time import unittest import contextlib from concurrent.futures import ThreadPoolExecutor, wait +from ...
Isolate problems in concurrency test runs
py
diff --git a/models.py b/models.py index <HASH>..<HASH> 100644 --- a/models.py +++ b/models.py @@ -547,7 +547,9 @@ class Sample(object): # if path is not specified, use default: # prj.paths.submission_dir + sample_name + yaml if path is None: - path = _os.path.join(self.prj.paths.submission_subdir, self.samp...
implemented yaml_file as Sample attribute; atac/chip-seq pipelines now require that to be passed as argument
py
diff --git a/setuptools/tests/test_develop.py b/setuptools/tests/test_develop.py index <HASH>..<HASH> 100644 --- a/setuptools/tests/test_develop.py +++ b/setuptools/tests/test_develop.py @@ -160,6 +160,19 @@ class TestNamespaces: tmpl = '__import__("site").addsitedir({target_str!r})' sc.write_text(tmp...
pip can't accept -e and -t
py
diff --git a/nodeconductor/server/admin/menu.py b/nodeconductor/server/admin/menu.py index <HASH>..<HASH> 100644 --- a/nodeconductor/server/admin/menu.py +++ b/nodeconductor/server/admin/menu.py @@ -62,6 +62,7 @@ class CustomMenu(Menu): IAAS_CLOUDS = ( 'nodeconductor_assembly_waldur.packages.*', + ...
Add waldur invoices to admin panel - WAL-<I>
py
diff --git a/docs/conf.py b/docs/conf.py index <HASH>..<HASH> 100644 --- a/docs/conf.py +++ b/docs/conf.py @@ -294,4 +294,4 @@ epub_copyright = copyright # Example configuration for intersphinx: refer to the Python standard library. -intersphinx_mapping = {'http://docs.python.org/': None} +intersphinx_mapping ...
Changed intersphinx conf to the new format
py
diff --git a/mpd/tests.py b/mpd/tests.py index <HASH>..<HASH> 100755 --- a/mpd/tests.py +++ b/mpd/tests.py @@ -31,8 +31,7 @@ except ImportError: "(twisted is not available for python >= 3.0 && python < 3.3)") TWISTED_MISSING = True -if sys.version_info >= (3, 5): - # asyncio would be availa...
tests: Drop precise case about now-unsupported versions
py
diff --git a/atomic_reactor/__init__.py b/atomic_reactor/__init__.py index <HASH>..<HASH> 100644 --- a/atomic_reactor/__init__.py +++ b/atomic_reactor/__init__.py @@ -17,12 +17,8 @@ import time from atomic_reactor.version import __version__ # noqa -try: - from osbs.constants import ATOMIC_REACTOR_LOGGING_FMT -...
Complete loggers by new level and message handler for user warnings *CLOUDBLD-<I>
py
diff --git a/tests/plugins/test_inject_yum_repos.py b/tests/plugins/test_inject_yum_repos.py index <HASH>..<HASH> 100644 --- a/tests/plugins/test_inject_yum_repos.py +++ b/tests/plugins/test_inject_yum_repos.py @@ -764,10 +764,10 @@ def test_inject_repos(configure_ca_bundle, inherited_user, include_koji_repo, re #...
test_inject_yum_repos: make test clearer Don't use build_dir.any_plaform to mean a specific platform.
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -132,7 +132,6 @@ setup( packages=[SRC_ROOT], install_requires=['numpy', 'scipy>=0.16'], - hiddenimports=['scipy.linalg.cython_blas', 'scipy.linalg.cython_lapack'], setup_requires=["Cython >= 0.19"], ex...
remove unnecessary line from setup.py
py
diff --git a/bcbio/rnaseq/umi.py b/bcbio/rnaseq/umi.py index <HASH>..<HASH> 100644 --- a/bcbio/rnaseq/umi.py +++ b/bcbio/rnaseq/umi.py @@ -9,6 +9,7 @@ import json import os import copy import glob +import sys from itertools import repeat, chain import bcbio.pipeline.datadict as dd @@ -61,7 +62,13 @@ def umi_tran...
Add more informative error message when umi_type is mis-specified. Thanks to Suraj Menon for pointing out this poor error message.
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -38,8 +38,9 @@ classifiers = [ setup( name='poker', - version='0.23.0', + version='0.23.1', description='Poker Framework', + long_description=open('README.rst', 'r').read().decode('utf-8'), classifie...
README is not rendered long_description is needed for the new pypi.org to show it.
py
diff --git a/statik/config.py b/statik/config.py index <HASH>..<HASH> 100644 --- a/statik/config.py +++ b/statik/config.py @@ -6,6 +6,10 @@ from statik.utils import underscore_var_names import logging logger = logging.getLogger(__name__) +__all__ = [ + 'StatikConfig', +] + class StatikConfig(YamlLoadable): ...
minor modification to include __all__ var in config script
py
diff --git a/dvc/__init__.py b/dvc/__init__.py index <HASH>..<HASH> 100644 --- a/dvc/__init__.py +++ b/dvc/__init__.py @@ -7,7 +7,7 @@ import os import warnings -VERSION_BASE = '0.21.0' +VERSION_BASE = '0.21.1' __version__ = VERSION_BASE PACKAGEPATH = os.path.abspath(os.path.dirname(__file__))
dvc: bump to <I>
py
diff --git a/src/ossos/core/ossos/__version__.py b/src/ossos/core/ossos/__version__.py index <HASH>..<HASH> 100644 --- a/src/ossos/core/ossos/__version__.py +++ b/src/ossos/core/ossos/__version__.py @@ -1 +1 @@ -version = "1.2" +version = "1.2.1"
bump the version for install by edward
py
diff --git a/dockerfabric/apiclient.py b/dockerfabric/apiclient.py index <HASH>..<HASH> 100644 --- a/dockerfabric/apiclient.py +++ b/dockerfabric/apiclient.py @@ -23,7 +23,7 @@ class DockerFabricConnections(ConnectionDict): Create a new connection, or return an existing one from the cache. Uses Fabric's curren...
Handling missing host on connection cache.
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -1,4 +1,5 @@ from setuptools import setup +from pathlib import Path setup( name='unsync', @@ -9,4 +10,6 @@ setup( author='Alex-Sherman', author_email='asherman1024@gmail.com', description='Unsynchronize...
FEAT include long_description in package This will display the readme on pypi.org.
py
diff --git a/spyder/preferences/shortcuts.py b/spyder/preferences/shortcuts.py index <HASH>..<HASH> 100644 --- a/spyder/preferences/shortcuts.py +++ b/spyder/preferences/shortcuts.py @@ -715,7 +715,6 @@ class ShortcutsTable(QTableView): def adjust_cells(self): """Adjust column size based on contents."...
Preferences: Don't adjust rows to contents in shortcuts That gives an uneven size for rows, which look ugly
py
diff --git a/spyderlib/plugins/workingdirectory.py b/spyderlib/plugins/workingdirectory.py index <HASH>..<HASH> 100644 --- a/spyderlib/plugins/workingdirectory.py +++ b/spyderlib/plugins/workingdirectory.py @@ -23,7 +23,7 @@ import os.path as osp # Local imports from spyderlib.utils import encoding -from spyderl...
Working Directory: Set home dir as initial working dir on first start
py
diff --git a/flux_led/utils.py b/flux_led/utils.py index <HASH>..<HASH> 100644 --- a/flux_led/utils.py +++ b/flux_led/utils.py @@ -294,7 +294,7 @@ def white_levels_to_color_temp(warm_white, cool_white): cold = cool_white / 255 brightness = warm + cold if brightness == 0: - temperature = ((cold / b...
Fix reversed zero guard in white_levels_to_color_temp
py
diff --git a/bokeh/_version.py b/bokeh/_version.py index <HASH>..<HASH> 100644 --- a/bokeh/_version.py +++ b/bokeh/_version.py @@ -1,4 +1,3 @@ -from __future__ import absolute_import, print_function IN_LONG_VERSION_PY = True # This file helps to compute a version number in source trees obtained from @@ -115,14 +114...
need to update _version.py too
py
diff --git a/ELiDE/layout.py b/ELiDE/layout.py index <HASH>..<HASH> 100644 --- a/ELiDE/layout.py +++ b/ELiDE/layout.py @@ -392,7 +392,10 @@ class ELiDELayout(FloatLayout): if self.character is None or 'charsheet' not in self.ids: Clock.schedule_once(self.reremote, 0) return - s...
Fix ValueError when creating new Portal I'm not sure why reremote is even being called now. I think it would be better to fix this by preventing that.
py
diff --git a/remote/client/test/py/test_remote_api.py b/remote/client/test/py/test_remote_api.py index <HASH>..<HASH> 100644 --- a/remote/client/test/py/test_remote_api.py +++ b/remote/client/test/py/test_remote_api.py @@ -21,8 +21,8 @@ import socket import subprocess import time from selenium.common.webserver impor...
Module name changed from webdriver to selenium r<I>
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100755 --- a/setup.py +++ b/setup.py @@ -23,9 +23,13 @@ def main(): author_email='benjamin_gyori@hms.harvard.edu', url='http://github.com/sorgerlab/indra', packages=['indra', 'indra.assemblers', 'indra.belief', - '...
Update package list in setup.py
py
diff --git a/wandb/api.py b/wandb/api.py index <HASH>..<HASH> 100644 --- a/wandb/api.py +++ b/wandb/api.py @@ -149,7 +149,7 @@ class Api(object): def save_patch(self, out_dir): if self.git.dirty: - self.git.repo.git.execute(['git', 'diff'], output_stream=open( + self.git.repo.git.e...
Generate patches with --submodule=diff so submodules appear in the generated patch
py
diff --git a/gandi/commands/iaas.py b/gandi/commands/iaas.py index <HASH>..<HASH> 100644 --- a/gandi/commands/iaas.py +++ b/gandi/commands/iaas.py @@ -128,7 +128,7 @@ def create(gandi, datacenter_id, memory, cores, ip_version, bandwidth, login, you can provide a ssh_key on command line calling this command as: ...
Fixes help for vm.create and ssh_key usage
py
diff --git a/tarbell/app.py b/tarbell/app.py index <HASH>..<HASH> 100644 --- a/tarbell/app.py +++ b/tarbell/app.py @@ -233,8 +233,6 @@ class TarbellSite: except AttributeError: return hooks - #@TODO traverse hooks - def call_hook(self, hook, *args, **kwargs): if len(self.hoo...
hooks are traversed remove todo
py
diff --git a/lib/devpipeline_configure/cache.py b/lib/devpipeline_configure/cache.py index <HASH>..<HASH> 100644 --- a/lib/devpipeline_configure/cache.py +++ b/lib/devpipeline_configure/cache.py @@ -64,6 +64,9 @@ class _CachedComponent: def __iter__(self): return _CachedComponetKeys(self._component) + ...
Add name function to _CachedComponent
py
diff --git a/jenkins/test_history/gen_json_test.py b/jenkins/test_history/gen_json_test.py index <HASH>..<HASH> 100755 --- a/jenkins/test_history/gen_json_test.py +++ b/jenkins/test_history/gen_json_test.py @@ -121,18 +121,6 @@ class GCSClientTest(unittest.TestCase): def setUp(self): self.client = MockedC...
Remove two non-hermetic unit tests.
py
diff --git a/pynmea2/stream.py b/pynmea2/stream.py index <HASH>..<HASH> 100644 --- a/pynmea2/stream.py +++ b/pynmea2/stream.py @@ -26,7 +26,7 @@ class NMEAStreamReader(object): ''' if data is None: if self.stream: - data = self.stream.read().decode() + da...
Modified read step to behave nicely with stdin.
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -22,6 +22,7 @@ import site import subprocess import sys from distutils.core import setup +from distutils import dir_util from os.path import abspath, exists, join, dirname # Our own imports @@ -250,6 +251,9 @@ if 'devjs...
Changed clean to delete the /build/lib directory
py
diff --git a/pypiper/utils.py b/pypiper/utils.py index <HASH>..<HASH> 100644 --- a/pypiper/utils.py +++ b/pypiper/utils.py @@ -288,7 +288,7 @@ def get_parameter(param, param_pools, on_missing=None, error=True): # Search for the requested parameter. for pool in param_pools: if param in pool: - ...
need to index into appropriate pool, not the entire collection of pools
py
diff --git a/tests/test_tempfile.py b/tests/test_tempfile.py index <HASH>..<HASH> 100644 --- a/tests/test_tempfile.py +++ b/tests/test_tempfile.py @@ -54,6 +54,10 @@ class ScratchDirTest(unittest.TestCase): files = os.listdir(".") self.assertNotIn("scratch_text", files) + def test_bad_root(self):...
Add unittest for bad rootpath.
py
diff --git a/eve_elastic/elastic.py b/eve_elastic/elastic.py index <HASH>..<HASH> 100644 --- a/eve_elastic/elastic.py +++ b/eve_elastic/elastic.py @@ -161,11 +161,11 @@ class Elastic(DataLayer): if index is None: index = self.index try: - get_indices(self.es).create(self.index)...
feat(mapping) - allow for putting the mapping on different indexes
py
diff --git a/rflint/parser/parser.py b/rflint/parser/parser.py index <HASH>..<HASH> 100644 --- a/rflint/parser/parser.py +++ b/rflint/parser/parser.py @@ -124,8 +124,10 @@ class RobotFile(object): self.tables = [] self.rows = [] - self._load(path) - + try: + self._load(path)...
add exception handling around the reading of files
py
diff --git a/__init__.py b/__init__.py index <HASH>..<HASH> 100644 --- a/__init__.py +++ b/__init__.py @@ -10,4 +10,4 @@ used from a setup script as __revision__ = "$Id$" -__version__ = "0.8.2" +__version__ = "0.9pre"
Bumped version number to <I>pre (there will be a couple of code snapshots before the real release, but I want to make it clear that a major new release is on the way).
py
diff --git a/master/buildbot/worker/latent.py b/master/buildbot/worker/latent.py index <HASH>..<HASH> 100644 --- a/master/buildbot/worker/latent.py +++ b/master/buildbot/worker/latent.py @@ -341,7 +341,8 @@ class AbstractLatentWorker(AbstractWorker): if self.state == States.NOT_SUBSTANTIATED: retu...
latent: Handle INSUBSTANTIATING_SUBSTANTIATING during insubstantiate()
py
diff --git a/simanneal/anneal.py b/simanneal/anneal.py index <HASH>..<HASH> 100644 --- a/simanneal/anneal.py +++ b/simanneal/anneal.py @@ -43,7 +43,7 @@ class Annealer(object): save_state_on_exit = True def __init__(self, initial_state=None, load_state=None): - if initial_state: + if len(initi...
Support state variable of type numpy.ndarray Fix the error with numpy arrays
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -1,4 +1,4 @@ -from distutils.core import setup +from setuptools import setup setup( name = 'npTDMS',
setup.py: distutils -> setuptools entrypoints aren't supported by distutils
py
diff --git a/aredis/connection.py b/aredis/connection.py index <HASH>..<HASH> 100644 --- a/aredis/connection.py +++ b/aredis/connection.py @@ -220,6 +220,12 @@ class BaseConnection: def __repr__(self): return self.description.format(**self._description_args) + def __del__(self): + try: + ...
OPT: add __del__ to BaseConnection
py
diff --git a/bcbio/variation/vfilter.py b/bcbio/variation/vfilter.py index <HASH>..<HASH> 100644 --- a/bcbio/variation/vfilter.py +++ b/bcbio/variation/vfilter.py @@ -135,7 +135,10 @@ def _freebayes_hard(in_file, data): if not vcfutils.vcf_has_variants(in_file): base, ext = utils.splitext_plus(in_file) ...
Tabix indexing of empty filtered FreeBayes variant files
py
diff --git a/indra/literature/pmc_client.py b/indra/literature/pmc_client.py index <HASH>..<HASH> 100644 --- a/indra/literature/pmc_client.py +++ b/indra/literature/pmc_client.py @@ -11,6 +11,13 @@ import xml.etree.ElementTree as ET from indra.literature import pubmed_client from indra.util import UnicodeXMLTreeBuild...
Fix compatibility bug introduced by #<I>
py
diff --git a/tacacs_plus/__init__.py b/tacacs_plus/__init__.py index <HASH>..<HASH> 100644 --- a/tacacs_plus/__init__.py +++ b/tacacs_plus/__init__.py @@ -802,7 +802,7 @@ def handle_command_line(): secret, timeout=args.timeout ).authenticate(args.username, password, - TAC_PLUS_A...
Fix improper command line usage of API.
py
diff --git a/uw_uwnetid/models.py b/uw_uwnetid/models.py index <HASH>..<HASH> 100644 --- a/uw_uwnetid/models.py +++ b/uw_uwnetid/models.py @@ -42,6 +42,7 @@ class Subscription(models.Model): SUBS_CODE_CANVAS_STUDENT = 77 SUBS_CODE_CANVAS_AFFILIATE = 78 SUBS_CODE_CANVAS_SPONSORED = 79 + SUBS_CODE_HUSKY...
sub and cat codes for husky onnet extension
py
diff --git a/rockAtlas/__version__.py b/rockAtlas/__version__.py index <HASH>..<HASH> 100644 --- a/rockAtlas/__version__.py +++ b/rockAtlas/__version__.py @@ -1 +1 @@ -__version__ = '0.2.1' +__version__ = '0.2.2'
added CLIENT.MULTI_STATEMENT to allow for multiple mysql statements to be executed with one query using PyMYSQL
py
diff --git a/telethon/client/uploads.py b/telethon/client/uploads.py index <HASH>..<HASH> 100644 --- a/telethon/client/uploads.py +++ b/telethon/client/uploads.py @@ -606,16 +606,16 @@ class UploadMethods: pos += len(part) + # Encryption part if needed + if key and iv:...
Fix MD5_CHECKSUM_INVALID for small files with custom key/iv (#<I>) Closes #<I>.
py
diff --git a/tests/test_SSCursor.py b/tests/test_SSCursor.py index <HASH>..<HASH> 100644 --- a/tests/test_SSCursor.py +++ b/tests/test_SSCursor.py @@ -2,7 +2,7 @@ from tests import base import aiomysql.cursors -class TestSSCursor(base.PyMySQLTestCase): +class TestSSCursor(base.AIOPyMySQLTestCase): def test_SS...
cleanup sslcursor (still not implemented)
py
diff --git a/tests/test_ptaskgroup.py b/tests/test_ptaskgroup.py index <HASH>..<HASH> 100644 --- a/tests/test_ptaskgroup.py +++ b/tests/test_ptaskgroup.py @@ -115,5 +115,35 @@ async def test_ptaskgroup_exc_handler(): assert count == 0 assert error_count == 10 - # after handlign error, all ref...
test: Fortify ptaskgroup test case * Cancellation handling blocks of subtasks may have additional awaits to clean up their resources, and those should be executed while shutting down the ptaskgroup. * It has been working as expected, but let's add an explicit test case to prevent regression.
py
diff --git a/adminfiles/admin.py b/adminfiles/admin.py index <HASH>..<HASH> 100644 --- a/adminfiles/admin.py +++ b/adminfiles/admin.py @@ -9,7 +9,8 @@ from adminfiles.settings import ADMINFILES_MEDIA_URL, JQUERY_URL from adminfiles.listeners import register_listeners class FileUploadAdmin(admin.ModelAdmin): - li...
Add description (editable) to file upload admin list.
py
diff --git a/alot/command.py b/alot/command.py index <HASH>..<HASH> 100644 --- a/alot/command.py +++ b/alot/command.py @@ -794,9 +794,9 @@ class OpenAttachmentCommand(Command): if handler: path = self.attachment.save(tempfile.gettempdir()) if '%s' in handler: - cmd = ha...
fix handling of spaces in attachment filenames
py
diff --git a/caniusepython3.py b/caniusepython3.py index <HASH>..<HASH> 100644 --- a/caniusepython3.py +++ b/caniusepython3.py @@ -129,7 +129,7 @@ def blocking_dependencies(projects, py3_projects): while len(check) > 0: project = check.pop(0) logging.info('Locating {}'.format(project)) - l...
Allow for pre-releases to be counted Some projects like oslo.messaging (for OpenStack) only have an alpha version out.
py
diff --git a/tests/unit/utils/test_utils.py b/tests/unit/utils/test_utils.py index <HASH>..<HASH> 100644 --- a/tests/unit/utils/test_utils.py +++ b/tests/unit/utils/test_utils.py @@ -103,3 +103,19 @@ class UtilsTestCase(TestCase): assert salt.utils.get_module_environment(_globals) == {} _globals['__pi...
Add unit test for virtual name is found.
py
diff --git a/toot/console.py b/toot/console.py index <HASH>..<HASH> 100644 --- a/toot/console.py +++ b/toot/console.py @@ -481,6 +481,10 @@ def main(): if os.getenv('TOOT_DEBUG'): logging.basicConfig(level=logging.DEBUG) + # If something is piped in, append it to commandline arguments + if not sys...
Allow piping in text to be tooted
py
diff --git a/test/test_api_state_rules.py b/test/test_api_state_rules.py index <HASH>..<HASH> 100644 --- a/test/test_api_state_rules.py +++ b/test/test_api_state_rules.py @@ -51,7 +51,7 @@ class TestRules(testUtils.AbstractTest): for r in self.appClient.state.draft.rules: if r.name in (TestRules.t...
correct test typo - caused "no attribute found" when preexisting rules exist
py
diff --git a/savannaclient/api/clusters.py b/savannaclient/api/clusters.py index <HASH>..<HASH> 100644 --- a/savannaclient/api/clusters.py +++ b/savannaclient/api/clusters.py @@ -38,8 +38,9 @@ class ClusterManager(base.ResourceManager): def create(self, name, plugin_name, hadoop_version, cluster_...
Added transient field for cluster Change-Id: I<I>aeb6e<I>b<I>e<I>b1a<I>aadbff3a<I>
py
diff --git a/holoviews/plotting/element.py b/holoviews/plotting/element.py index <HASH>..<HASH> 100644 --- a/holoviews/plotting/element.py +++ b/holoviews/plotting/element.py @@ -156,7 +156,7 @@ class ElementPlot(Plot): self.handles['title'] = axis.set_title(title) for hook in self.finalize_...
Changed signature of finalize_hook call
py
diff --git a/seleniumtid/utils.py b/seleniumtid/utils.py index <HASH>..<HASH> 100644 --- a/seleniumtid/utils.py +++ b/seleniumtid/utils.py @@ -25,6 +25,11 @@ from seleniumtid import selenium_driver class Utils(object): def __init__(self, driver): + """Initialize Utils instance + + :param driver: w...
Add driver class type to help IDEs
py
diff --git a/github_issues.py b/github_issues.py index <HASH>..<HASH> 100644 --- a/github_issues.py +++ b/github_issues.py @@ -31,6 +31,10 @@ parser.add_argument('-f', action="store", dest="format", default='changelog', help="Format for print, either 'changelog' (for our " ...
github_issues: Add a --page option to get more results of a given milestone The Github default is <I> results, which sometimes is too small
py
diff --git a/src/pyrocore/util/metafile.py b/src/pyrocore/util/metafile.py index <HASH>..<HASH> 100644 --- a/src/pyrocore/util/metafile.py +++ b/src/pyrocore/util/metafile.py @@ -181,6 +181,8 @@ def add_fast_resume(meta, datapath): files = meta["info"].get("files", None) single = files is None if single:...
fixed exception on zero size torrents; add filename to directory path for single-file fast-resume
py
diff --git a/scripts/experiments/run_srl.py b/scripts/experiments/run_srl.py index <HASH>..<HASH> 100755 --- a/scripts/experiments/run_srl.py +++ b/scripts/experiments/run_srl.py @@ -160,10 +160,10 @@ class SrlExpParamsRunner(ExpParamsRunner): root = RootStage() setup = SrlExpParams() ...
Updating script for smaller experiments.
py
diff --git a/salt/states/pkg.py b/salt/states/pkg.py index <HASH>..<HASH> 100644 --- a/salt/states/pkg.py +++ b/salt/states/pkg.py @@ -1275,6 +1275,7 @@ def installed( sources=sources, reinstall=bool(to_reinstall), ...
Pass through update_holds to pkg.install
py
diff --git a/phy/cluster/views/base.py b/phy/cluster/views/base.py index <HASH>..<HASH> 100644 --- a/phy/cluster/views/base.py +++ b/phy/cluster/views/base.py @@ -186,6 +186,12 @@ class ManualClusteringView(object): # them here, in the main GUI thread. @worker.signals.finished.connect def fin...
Tentative temporary work-around for #<I>
py
diff --git a/django_plotly_dash/dash_wrapper.py b/django_plotly_dash/dash_wrapper.py index <HASH>..<HASH> 100644 --- a/django_plotly_dash/dash_wrapper.py +++ b/django_plotly_dash/dash_wrapper.py @@ -83,10 +83,10 @@ class DjangoDash: try: full_url = reverse(app_pathname,kwargs={'id':ndid}) ...
Unwind attempt to use proxy in jupyterhub, at least for now
py
diff --git a/uproot_methods/classes/TLorentzVector.py b/uproot_methods/classes/TLorentzVector.py index <HASH>..<HASH> 100644 --- a/uproot_methods/classes/TLorentzVector.py +++ b/uproot_methods/classes/TLorentzVector.py @@ -272,7 +272,7 @@ class ArrayMethods(Common, uproot_methods.base.ROOTMethods): return self...
Allow TLorentzVector sum to be more permissive to jaggedness
py