diff stringlengths 139 3.65k | message stringlengths 8 627 | diff_languages stringclasses 1
value |
|---|---|---|
diff --git a/setup.py b/setup.py
index <HASH>..<HASH> 100755
--- a/setup.py
+++ b/setup.py
@@ -8,6 +8,7 @@ from __pkginfo__ import \
scripts, short_desc, tests_require, \
VERSION, web, zip_safe
+from setuptools import setup
setup(
author ... | Reinstate inadventently dropped import | py |
diff --git a/tests/utils.py b/tests/utils.py
index <HASH>..<HASH> 100644
--- a/tests/utils.py
+++ b/tests/utils.py
@@ -68,7 +68,7 @@ def check_client_method():
response = Mock()
response.status = 200
http.request = Mock(return_value=(
- response, json.dumps(returned_object)))
+ resp... | the response from httplib2 is now bytes, not str | py |
diff --git a/ulid/__init__.py b/ulid/__init__.py
index <HASH>..<HASH> 100644
--- a/ulid/__init__.py
+++ b/ulid/__init__.py
@@ -7,6 +7,12 @@
:copyright: (c) 2017 Andrew Hawker.
:license: Apache 2.0, see LICENSE for more details.
"""
+from . import api
+from .api import *
+from . import ulid
+from .ulid import... | Expose api and ulid modules as package interface. | py |
diff --git a/test_copier.py b/test_copier.py
index <HASH>..<HASH> 100644
--- a/test_copier.py
+++ b/test_copier.py
@@ -65,6 +65,15 @@ def test_copy_dir(reporter):
shutil.rmtree(test_dir)
+@patch("moban.reporter.report_error_message")
+def test_copy_dir_with_error(reporter):
+ test_dir = "/tmp/copy-a-directo... | :microscope: better test coverage | py |
diff --git a/abydos/clustering.py b/abydos/clustering.py
index <HASH>..<HASH> 100644
--- a/abydos/clustering.py
+++ b/abydos/clustering.py
@@ -225,7 +225,8 @@ def rle_encode(text, use_bwt=True):
"""
if use_bwt:
text = bwt(text)
- text = [str(len(list(g)))+k for k,g in groupby(text)]
+ text = [(... | re-org of decoder for time efficiency; ensured that encoder won't produce longer strings than input | py |
diff --git a/setup.py b/setup.py
index <HASH>..<HASH> 100755
--- a/setup.py
+++ b/setup.py
@@ -5,7 +5,7 @@ from setuptools import setup, find_packages
install_requires = []
tests_require = ["coverage", "flake8", "pexpect", "wheel"]
-importlib_backport_requires = ["importlib-metadata >= 0.23, < 3"]
+importlib_backpo... | Update importlib-metadata dependency pin (#<I>) | py |
diff --git a/cwltool/job.py b/cwltool/job.py
index <HASH>..<HASH> 100644
--- a/cwltool/job.py
+++ b/cwltool/job.py
@@ -401,7 +401,7 @@ class DockerCommandLineJob(JobBase):
if rm_container:
runtime.append(u"--rm")
- runtime.append(u"--env=TMPDIR=%s" % self.builder.tmpdir)
+ runtime.... | switch back to hardcoded /tmp as TMPDIR inside Docker | py |
diff --git a/mangopay/api.py b/mangopay/api.py
index <HASH>..<HASH> 100644
--- a/mangopay/api.py
+++ b/mangopay/api.py
@@ -155,8 +155,11 @@ class APIRequest(object):
return result, json.loads(content)
except ValueError:
- is_cardregistration_result = isinstance... | Modified for debugging purposes. | py |
diff --git a/glove/glove.py b/glove/glove.py
index <HASH>..<HASH> 100644
--- a/glove/glove.py
+++ b/glove/glove.py
@@ -2,6 +2,7 @@
# http://nlp.stanford.edu/projects/glove/.
import collections
+import sys
try:
# Python 2 compat
import cPickle as pickle
@@ -217,6 +218,11 @@ class Glove(object):
i... | Python 3: encode string queries to bytes | py |
diff --git a/OpenPNM/Utilities/IO.py b/OpenPNM/Utilities/IO.py
index <HASH>..<HASH> 100644
--- a/OpenPNM/Utilities/IO.py
+++ b/OpenPNM/Utilities/IO.py
@@ -74,10 +74,10 @@ class PNM(object):
#Enter each object's data, object tree and models into dictionary
for obj in all_objs:
- try:
- ... | IO no longer deletes the logger...this is not needed for the approach used. | py |
diff --git a/kettle.py b/kettle.py
index <HASH>..<HASH> 100755
--- a/kettle.py
+++ b/kettle.py
@@ -133,6 +133,7 @@ class Kettle(socketserver.BaseRequestHandler):
game = Game(players=players)
manager = KettleManager(game)
game.manager.register(manager)
+ game.current_player = game.players[0] # Dumb.
game.s... | Kettle: Force the current_player to be defined at Game.start() | py |
diff --git a/workshift/fill.py b/workshift/fill.py
index <HASH>..<HASH> 100644
--- a/workshift/fill.py
+++ b/workshift/fill.py
@@ -179,7 +179,11 @@ def _get_semester():
semester, created = Semester.objects.get_or_create(
year=year,
season=season,
- defaults=dict(start_date=... | Added a default rate to a semester | py |
diff --git a/scout/constants/gene_tags.py b/scout/constants/gene_tags.py
index <HASH>..<HASH> 100644
--- a/scout/constants/gene_tags.py
+++ b/scout/constants/gene_tags.py
@@ -1,3 +1,7 @@
+# These inheritance models are distinct from the official OMIM models of inheritance for variants
+# Which are specified by GENETIC_... | add comment describing gene custom inheritance models | py |
diff --git a/setup.py b/setup.py
index <HASH>..<HASH> 100644
--- a/setup.py
+++ b/setup.py
@@ -86,15 +86,14 @@ def run_make_print_config():
def run_nm_defined_symbols(objfile):
- stdout = subprocess.check_output(["nm", objfile])
+ stdout = subprocess.check_output(["nm", "-g", "-P", objfile])
if IS_PYTHO... | Make symbol check even more portable POSIX does in fact define several nm options: use -g to drop non-global symbols (including debugging symbols) and -P to make parsing the output easier. Tested on Linux, macOS, OpenBSD, and Illumos. Ignore symbols of types U (undefined), F (BSD filenames), and W/w (weak definitions... | py |
diff --git a/margaritashotgun/memory.py b/margaritashotgun/memory.py
index <HASH>..<HASH> 100755
--- a/margaritashotgun/memory.py
+++ b/margaritashotgun/memory.py
@@ -90,10 +90,11 @@ class memory():
filename))
def to_s3(self, key_id, secret_key, bucket... | don't initialize progressbar for parallel s3 uploads | py |
diff --git a/setup.py b/setup.py
index <HASH>..<HASH> 100644
--- a/setup.py
+++ b/setup.py
@@ -33,7 +33,7 @@ setup(
author_email='pydanny@gmail.com',
url='https://github.com/pydanny/django-wysiwyg',
license='MIT',
- packages=find_packages(exclude=('test_project',)),
+ packages=find_packages(exclude... | setup.py: properly exclude test_project | py |
diff --git a/master/buildbot/util/deferwaiter.py b/master/buildbot/util/deferwaiter.py
index <HASH>..<HASH> 100644
--- a/master/buildbot/util/deferwaiter.py
+++ b/master/buildbot/util/deferwaiter.py
@@ -37,6 +37,7 @@ class DeferWaiter:
self._waited.add(id(d))
d.addBoth(self._finished, d)
+ re... | util: Return added Deferred from DeferWaiter.add() | py |
diff --git a/benchexec/result.py b/benchexec/result.py
index <HASH>..<HASH> 100644
--- a/benchexec/result.py
+++ b/benchexec/result.py
@@ -79,6 +79,7 @@ RESULT_ERROR = 'ERROR' # or any other value not listed here
RESULT_TRUE_PROP = 'true'
"""property holds"""
RESULT_FALSE_REACH = STR_FAL... | Also accept the old string for RESULT_FALSE_REACH to allow table-generator to properly handle results produced with older versions of BenchExec. | py |
diff --git a/allianceauth/authentication/signals.py b/allianceauth/authentication/signals.py
index <HASH>..<HASH> 100644
--- a/allianceauth/authentication/signals.py
+++ b/allianceauth/authentication/signals.py
@@ -119,7 +119,7 @@ def validate_main_character_token(sender, instance, *args, **kwargs):
in... | Don't force token updates on main character checks. | py |
diff --git a/lib/svtplay_dl/service/eurosport.py b/lib/svtplay_dl/service/eurosport.py
index <HASH>..<HASH> 100644
--- a/lib/svtplay_dl/service/eurosport.py
+++ b/lib/svtplay_dl/service/eurosport.py
@@ -10,7 +10,7 @@ from svtplay_dl.error import ServiceError
class Eurosport(Service):
- supported_domains = ['se.... | eurosport: add support for more subdomains. | py |
diff --git a/wagtailmarkdown/edit_handlers.py b/wagtailmarkdown/edit_handlers.py
index <HASH>..<HASH> 100644
--- a/wagtailmarkdown/edit_handlers.py
+++ b/wagtailmarkdown/edit_handlers.py
@@ -14,5 +14,4 @@ except ImportError:
class MarkdownPanel(FieldPanel):
- def __init__(self, field_name, classname="", widget=... | FIX: Wagtail 2 compatibility in `MarkdownPanel` (#<I>) Fixes errors: * "got an unexpected keyword argument 'heading'" — Caused by a new keyword argument in Wagtail 2. * "got multiple values for argument 'heading'" — Caused by a keyword argument getting converted to a positional argument. | py |
diff --git a/openquake/hazardlib/gsim/toro_2002.py b/openquake/hazardlib/gsim/toro_2002.py
index <HASH>..<HASH> 100644
--- a/openquake/hazardlib/gsim/toro_2002.py
+++ b/openquake/hazardlib/gsim/toro_2002.py
@@ -89,7 +89,7 @@ class ToroEtAl2002(GMPE):
if imt.period == 4.0:
mean /= 0.559
- ... | Refactored toro_<I> | py |
diff --git a/src/ossos-pipeline/pipeline/plant.py b/src/ossos-pipeline/pipeline/plant.py
index <HASH>..<HASH> 100755
--- a/src/ossos-pipeline/pipeline/plant.py
+++ b/src/ossos-pipeline/pipeline/plant.py
@@ -281,4 +281,4 @@ def main(argv):
if __name__ == '__main__':
- sys.exit(main(sys.argv))
\ No newline at end... | PEP8 doesn't like newlines at end of file, removed one | py |
diff --git a/aigerbv/common.py b/aigerbv/common.py
index <HASH>..<HASH> 100644
--- a/aigerbv/common.py
+++ b/aigerbv/common.py
@@ -210,12 +210,35 @@ def sink(wordlen, inputs):
)
+FULL_ADDER = aiger.parse("""aag 10 3 0 2 7
+2
+4
+6
+18
+21
+8 4 2
+10 5 3
+12 11 9
+14 12 6
+16 13 7
+18 17 15
+20 15 9
+i0 x
+i1 y... | Parsing the full adder is slow! Using relabels halves runtime | py |
diff --git a/projects/l2_pooling/multi_column_convergence.py b/projects/l2_pooling/multi_column_convergence.py
index <HASH>..<HASH> 100644
--- a/projects/l2_pooling/multi_column_convergence.py
+++ b/projects/l2_pooling/multi_column_convergence.py
@@ -403,7 +403,7 @@ def plotConvergenceByColumnTopology(results, columnRa... | RES-<I> fix error in topology convergence printing logic | py |
diff --git a/salt/minion.py b/salt/minion.py
index <HASH>..<HASH> 100644
--- a/salt/minion.py
+++ b/salt/minion.py
@@ -15,6 +15,7 @@ import threading
import time
import traceback
import sys
+import signal
# Import third party libs
import zmq
@@ -589,6 +590,12 @@ class Minion(object):
self.schedule.f... | Fix #<I> I realize why I did it the way I did, originally I did not use a poll in the zeromq process, and the result was that the actual gathering of the command got dropped when the signal inturuped the zeromq recv wait, but we should be fine now that we are using poll. This may still be a problem though, so we will ... | py |
diff --git a/py3status/modules/volume_status.py b/py3status/modules/volume_status.py
index <HASH>..<HASH> 100644
--- a/py3status/modules/volume_status.py
+++ b/py3status/modules/volume_status.py
@@ -118,7 +118,7 @@ class AmixerBackend(AudioBackend):
self.device = 'default'
self.cmd = ['amixer', '-... | volume_status module: use human-scale volume percentages like alsamixer (#<I>) * Update volume_status.py Use human-scale volume percentages like alsamixer does. Log scale makes no sense * Update volume_status.py split up <'amixer -M'> command to <'amixer', '-M'> for style compatibility | py |
diff --git a/scripts/worker.py b/scripts/worker.py
index <HASH>..<HASH> 100755
--- a/scripts/worker.py
+++ b/scripts/worker.py
@@ -21,7 +21,7 @@ RESULTS_PATH = 'results'
EXECUTION_FILES_PATH = 'execution_files'
SYNC_FILE = 'sync_files'
-MAX_FILE_SIZE = 65536
+MAX_FILE_SIZE = 81920
class SubmissionHandler(objec... | Increase output filesize to <I>KB. | py |
diff --git a/killbill/__init__.py b/killbill/__init__.py
index <HASH>..<HASH> 100644
--- a/killbill/__init__.py
+++ b/killbill/__init__.py
@@ -27,7 +27,7 @@ def load(file):
"""
fp = open(file)
reader = csv.reader(fp)
- headers = reader.next()
+ headers = next(reader)
costs = Costs(headers)
... | Use next(reader) rather than reader.next() to make Python 3.x happy. | py |
diff --git a/django_webmap_corpus/tests/south_settings.py b/django_webmap_corpus/tests/south_settings.py
index <HASH>..<HASH> 100644
--- a/django_webmap_corpus/tests/south_settings.py
+++ b/django_webmap_corpus/tests/south_settings.py
@@ -1,3 +1,4 @@
+# -*- coding: utf-8 -*-
"""
These settings are used by the ``manag... | add unicode to south_settings | py |
diff --git a/tests/test_document.py b/tests/test_document.py
index <HASH>..<HASH> 100644
--- a/tests/test_document.py
+++ b/tests/test_document.py
@@ -1,7 +1,7 @@
from tests import BaseTestCase
from flask import Flask
from flaskext import mongoalchemy
-from nose.tools import assert_equals
+from nose.tools import ass... | An assert for use when two documents are not equal | py |
diff --git a/utool/util_git.py b/utool/util_git.py
index <HASH>..<HASH> 100755
--- a/utool/util_git.py
+++ b/utool/util_git.py
@@ -248,6 +248,11 @@ class Repo(util_dev.NiceRepr):
if len(urls) > 1:
print('[git] WARNING: repo %r has multiple urls' % (repo,))
url = urls[0]
+ ... | Some special cases in parsing github remote configuration files | py |
diff --git a/src/scs_core/client/http_response.py b/src/scs_core/client/http_response.py
index <HASH>..<HASH> 100644
--- a/src/scs_core/client/http_response.py
+++ b/src/scs_core/client/http_response.py
@@ -25,7 +25,7 @@ class HTTPResponse(JSONable, ABC):
# -------------------------------------------------------... | Added ConfigurationSample class | py |
diff --git a/AegeanTools/source_finder.py b/AegeanTools/source_finder.py
index <HASH>..<HASH> 100755
--- a/AegeanTools/source_finder.py
+++ b/AegeanTools/source_finder.py
@@ -1856,6 +1856,8 @@ class SourceFinder(object):
islands = find_islands(im=data, bkg=np.zeros_like(data), rms=rmsimg,
... | add found/fit island/source reporting | py |
diff --git a/pyphi/network.py b/pyphi/network.py
index <HASH>..<HASH> 100644
--- a/pyphi/network.py
+++ b/pyphi/network.py
@@ -121,7 +121,7 @@ class Network:
@property
def causally_significant_nodes(self):
- """See :func:`connectivity.causally_significant_nodes`."""
+ """See :func:`~pyphi.conn... | Fix cross-reference in docstring | py |
diff --git a/glue/segmentsUtils.py b/glue/segmentsUtils.py
index <HASH>..<HASH> 100644
--- a/glue/segmentsUtils.py
+++ b/glue/segmentsUtils.py
@@ -76,7 +76,10 @@ def fromfilenames(filenames, coltype=int):
pattern = re.compile(r"-([\d.]+)-([\d.]+)\.[\w_+#]+\Z")
l = segments.segmentlist()
for name in filenames:
+ ... | allow fromfilenames function to accept xml filenames with .gz extension. Not nice work but it works for now. Ideally it should be for any type of files | py |
diff --git a/spinoff/util/testing.py b/spinoff/util/testing.py
index <HASH>..<HASH> 100644
--- a/spinoff/util/testing.py
+++ b/spinoff/util/testing.py
@@ -4,6 +4,8 @@ from functools import wraps
from twisted.internet.task import Clock
+from spinoff.util.async import CancelledError
+
__all__ = ['deferred', 'asse... | Added util.testing.cancel_deferred which suppresses the CancelledError before cancelling the Deferred | py |
diff --git a/blockstore/lib/nameset/virtualchain_hooks.py b/blockstore/lib/nameset/virtualchain_hooks.py
index <HASH>..<HASH> 100644
--- a/blockstore/lib/nameset/virtualchain_hooks.py
+++ b/blockstore/lib/nameset/virtualchain_hooks.py
@@ -38,17 +38,21 @@ log = virtualchain.session.log
blockstore_db = None
last_load_t... | A transaction can have multiple recipients (i.e. for transfers), so take the first non-OP_RETURN one when we have a choice. | py |
diff --git a/nose/test_quantity.py b/nose/test_quantity.py
index <HASH>..<HASH> 100644
--- a/nose/test_quantity.py
+++ b/nose/test_quantity.py
@@ -2659,6 +2659,19 @@ def test_actionAngleIsochroneApprix_setup_b_units():
assert numpy.fabs(aA._aAI.b-aAu._aAI.b) < 10.**-10., 'b with units in actionAngleIsochroneApprox... | Test that tintJ in actionAngleIsochroneApprox can have units | py |
diff --git a/openquake/calculators/classical.py b/openquake/calculators/classical.py
index <HASH>..<HASH> 100644
--- a/openquake/calculators/classical.py
+++ b/openquake/calculators/classical.py
@@ -84,7 +84,7 @@ def classical_split_filter(srcs, srcfilter, gsims, params, monitor):
yield classical(blocks[0], sr... | [skip CI] Former-commit-id: 3d3c7d9f3dad<I>eb8b<I>fc<I>e<I> | py |
diff --git a/test/test_distance.py b/test/test_distance.py
index <HASH>..<HASH> 100644
--- a/test/test_distance.py
+++ b/test/test_distance.py
@@ -15,17 +15,9 @@ class TestDistance(unittest.TestCase):
"My Gym. Childrens Fitness"))
def test_get_jaro_dist... | update to work with py<I> | py |
diff --git a/niworkflows/viz/plots.py b/niworkflows/viz/plots.py
index <HASH>..<HASH> 100644
--- a/niworkflows/viz/plots.py
+++ b/niworkflows/viz/plots.py
@@ -360,6 +360,8 @@ def _carpet(
ax1.spines["bottom"].set_visible(False)
ax1.spines["left"].set_color("none")
ax1.spines["left"].set_visible(False)
+ ... | Set (optional) title on carpet plot | py |
diff --git a/binance/depthcache.py b/binance/depthcache.py
index <HASH>..<HASH> 100644
--- a/binance/depthcache.py
+++ b/binance/depthcache.py
@@ -199,6 +199,14 @@ class DepthCacheManager(object):
"""
+ if 'e' in msg and msg['e'] == 'error':
+ # close the socket
+ self.close()
... | Handle websocket disconnecting | py |
diff --git a/setup.py b/setup.py
index <HASH>..<HASH> 100644
--- a/setup.py
+++ b/setup.py
@@ -2,9 +2,13 @@ from distutils.core import setup
setup(
name='rawdisk',
+ author='D. Bakunas'
version='0.1dev',
description='Experimental python code to learn different disk formats',
packages=['rawdisk... | Modified license field in setup.py | py |
diff --git a/container/config.py b/container/config.py
index <HASH>..<HASH> 100644
--- a/container/config.py
+++ b/container/config.py
@@ -300,7 +300,7 @@ class BaseAnsibleContainerConfig(Mapping):
config = json.load(open(abspath))
except Exception as exc:
raise AnsibleCon... | Don't bomb out on an empty vars file (#<I>) Fixes #<I> | py |
diff --git a/malcolm/assemblyutil.py b/malcolm/assemblyutil.py
index <HASH>..<HASH> 100644
--- a/malcolm/assemblyutil.py
+++ b/malcolm/assemblyutil.py
@@ -225,7 +225,7 @@ def call_with_map(ob, name, d, *args):
ob = getattr(ob, n)
if d and "name" not in ob.MethodMeta.takes.elements and "name" in d:
- ... | ruamel.ordereddict doesn't support copying, us a normal one | py |
diff --git a/test_glibc.py b/test_glibc.py
index <HASH>..<HASH> 100644
--- a/test_glibc.py
+++ b/test_glibc.py
@@ -99,8 +99,8 @@ class GlibcTests(unittest.TestCase):
def get_real_constant_value(info):
with tempfile.TemporaryDirectory() as tmpdir:
- name_c = os.path.join(tmpdir, 'test_{}.c'.format(info.na... | Use valueof_ prefix for constant value tests | py |
diff --git a/plexapi/media.py b/plexapi/media.py
index <HASH>..<HASH> 100644
--- a/plexapi/media.py
+++ b/plexapi/media.py
@@ -351,6 +351,7 @@ class Optimized(PlexObject):
TAG = 'Optimized'
def _loadData(self, data):
+ self._data = data
self.id = data.attrib.get('id')
self.composite... | add _data attrib to Optimized and Conversion | py |
diff --git a/cherrypy/lib/filter/xmlrpcfilter.py b/cherrypy/lib/filter/xmlrpcfilter.py
index <HASH>..<HASH> 100644
--- a/cherrypy/lib/filter/xmlrpcfilter.py
+++ b/cherrypy/lib/filter/xmlrpcfilter.py
@@ -204,8 +204,6 @@ class XmlRpcFilter(BaseFilter):
import sys
# Since we got here because of a... | oops missed one little thing in the previous commit... duh! | py |
diff --git a/asks/request_object.py b/asks/request_object.py
index <HASH>..<HASH> 100644
--- a/asks/request_object.py
+++ b/asks/request_object.py
@@ -275,9 +275,7 @@ class Request:
if not self.path:
self.path = '/'
if self.query:
- self.path = requote_uri(self.path + '?' +
- ... | more quote wangjangling. Blanket requote all paths. | py |
diff --git a/examples/run_squad.py b/examples/run_squad.py
index <HASH>..<HASH> 100644
--- a/examples/run_squad.py
+++ b/examples/run_squad.py
@@ -855,7 +855,7 @@ def main():
global_step = 0
if args.do_train:
cached_train_features_file = args.train_file+'_{0}_{1}_{2}_{3}'.format(
- args.be... | Fix error when `bert_model` param is path or url. Error occurs when `bert_model` param is path or url. Therefore, if it is path, specify the last path to prevent error. | py |
diff --git a/urbansim/developer/sqftproforma.py b/urbansim/developer/sqftproforma.py
index <HASH>..<HASH> 100644
--- a/urbansim/developer/sqftproforma.py
+++ b/urbansim/developer/sqftproforma.py
@@ -572,7 +572,6 @@ class SqFtProForma(object):
else:
df['min_max_fars'] = df[['max_far_from_heights', ... | one of my debug statements snuck in there | py |
diff --git a/sgp4/tests.py b/sgp4/tests.py
index <HASH>..<HASH> 100644
--- a/sgp4/tests.py
+++ b/sgp4/tests.py
@@ -275,13 +275,12 @@ def load_tests(loader, tests, ignore):
# Defeat a problem on Travis CI by importing numpy early.
# Otherwise, on Travis CI, when the doctest tries to import
- #... | Try fixing Travis CI with sys.path shenanigans | py |
diff --git a/panoramix/models.py b/panoramix/models.py
index <HASH>..<HASH> 100644
--- a/panoramix/models.py
+++ b/panoramix/models.py
@@ -134,9 +134,12 @@ class Dashboard(Model, AuditMixinNullable):
def __repr__(self):
return self.dashboard_title
+ @property
+ def url(self):
+ return "/pan... | Increasing test coverage to <I>% | py |
diff --git a/Lib/fontMath/mathKerning.py b/Lib/fontMath/mathKerning.py
index <HASH>..<HASH> 100644
--- a/Lib/fontMath/mathKerning.py
+++ b/Lib/fontMath/mathKerning.py
@@ -62,6 +62,22 @@ class MathKerning(object):
g[groupName].append(glyphName)
return g
+ def getGroupsForGlyph(self, gl... | Added a method for getting the list of groups that a glyph belongs to. | py |
diff --git a/areaSelector.py b/areaSelector.py
index <HASH>..<HASH> 100644
--- a/areaSelector.py
+++ b/areaSelector.py
@@ -331,7 +331,7 @@ class ImageWidget(QtGui.QLabel):
y2 = y2 if y2 >= 0.0 else 0.0
y2 = y2 if y2 <= 1.0 else 1.0
- rect = QtCore.QRect(10, 20, 30, 40)
+ rect = QtCore.QRect(min(pixX1, pixX2),... | Partial implementation of selected PDF thumbnail in the Position localisation widget. | py |
diff --git a/gwpy/cli/cliproduct.py b/gwpy/cli/cliproduct.py
index <HASH>..<HASH> 100644
--- a/gwpy/cli/cliproduct.py
+++ b/gwpy/cli/cliproduct.py
@@ -34,7 +34,7 @@ from functools import wraps
from six import add_metaclass
-from matplotlib import rcParams
+from matplotlib import rcParams, rc
try:
from matplo... | Implement --title option, removing latex checks from previous attempt | py |
diff --git a/setup.py b/setup.py
index <HASH>..<HASH> 100755
--- a/setup.py
+++ b/setup.py
@@ -17,7 +17,4 @@ setup(name='aiohttp-json-rpc',
'pytest11': [
'aiohttp-json-rpc = aiohttp_json_rpc.pytest',
]
- },
- classifiers=[
- 'Framework :: Pytest',
- ])
+ ... | packaging: remove classifiers from setup.py setuptools seems to ignore all classifiers set in the setup.cfg if there are classifiers set in the setup.py | py |
diff --git a/pyramid_authsanity/__init__.py b/pyramid_authsanity/__init__.py
index <HASH>..<HASH> 100644
--- a/pyramid_authsanity/__init__.py
+++ b/pyramid_authsanity/__init__.py
@@ -1,6 +1,3 @@
-import logging
-log = logging.getLogger(__name__)
-
import base64
import os | We don't directly use the logger So don't import it. | py |
diff --git a/guake/boxes.py b/guake/boxes.py
index <HASH>..<HASH> 100644
--- a/guake/boxes.py
+++ b/guake/boxes.py
@@ -245,18 +245,12 @@ class RootTerminalBox(Gtk.Overlay, TerminalHolder):
def on_search_prev_clicked(self, widget):
term = self.last_terminal_focused
result = term.search_find_previo... | Remove set_sensitive on search next/prev button | py |
diff --git a/bingo/views.py b/bingo/views.py
index <HASH>..<HASH> 100644
--- a/bingo/views.py
+++ b/bingo/views.py
@@ -60,7 +60,8 @@ def main(request, reclaim_form=None, create_form=None):
def reclaim_board(request):
ip = request.META['REMOTE_ADDR']
game = get_game(site=get_current_site(request), create=Fals... | check if game is not None before calling game.save() | py |
diff --git a/cflib/crazyflie/mem/lighthouse_memory.py b/cflib/crazyflie/mem/lighthouse_memory.py
index <HASH>..<HASH> 100644
--- a/cflib/crazyflie/mem/lighthouse_memory.py
+++ b/cflib/crazyflie/mem/lighthouse_memory.py
@@ -115,12 +115,12 @@ class LighthouseBsCalibration:
result = LighthouseCalibrationSweep()
... | (#<I>) fixed flake8 issue | py |
diff --git a/pandas/tseries/index.py b/pandas/tseries/index.py
index <HASH>..<HASH> 100644
--- a/pandas/tseries/index.py
+++ b/pandas/tseries/index.py
@@ -422,13 +422,20 @@ class DatetimeIndex(Int64Index):
@classmethod
def _cached_range(cls, start=None, end=None, periods=None, offset=None,
... | CLN: Clean up the _cached_range exceptions and checks (Plus catch the uncaught obj + None TypeError that was going on in the test cases) | py |
diff --git a/setuptools/command/easy_install.py b/setuptools/command/easy_install.py
index <HASH>..<HASH> 100755
--- a/setuptools/command/easy_install.py
+++ b/setuptools/command/easy_install.py
@@ -1844,25 +1844,14 @@ def chmod(path, mode):
def fix_jython_executable(executable, options):
- if sys.platform.star... | Deprecate fix_jython_executable and replace with JythonCommandSpec | py |
diff --git a/parsl/dataflow/dflow.py b/parsl/dataflow/dflow.py
index <HASH>..<HASH> 100644
--- a/parsl/dataflow/dflow.py
+++ b/parsl/dataflow/dflow.py
@@ -256,6 +256,7 @@ class DataFlowKernel(object):
final_state_flag = True
self.tasks_failed_count += 1
+ self.tasks[ta... | Minor fix to ensure failed tasks have a finished time. | py |
diff --git a/tests/optvis/param/test_unit_balls.py b/tests/optvis/param/test_unit_balls.py
index <HASH>..<HASH> 100644
--- a/tests/optvis/param/test_unit_balls.py
+++ b/tests/optvis/param/test_unit_balls.py
@@ -10,8 +10,9 @@ learning_rate = .1
num_steps = 16
+@pytest.mark.skip(reason="Unpredictably imprecise right... | Skipping unit_ball_test for now as they fail remotely. | py |
diff --git a/Exscript/protocols/drivers/ios.py b/Exscript/protocols/drivers/ios.py
index <HASH>..<HASH> 100644
--- a/Exscript/protocols/drivers/ios.py
+++ b/Exscript/protocols/drivers/ios.py
@@ -31,7 +31,7 @@ from .driver import Driver
_user_re = [re.compile(r'user ?name: ?$', re.I)]
_password_re = [re.compile(r'(?... | Ajusted IOS driver for login with SSH (was guessed as one_os). Added another IOS test banner. | py |
diff --git a/tunigo/cache.py b/tunigo/cache.py
index <HASH>..<HASH> 100644
--- a/tunigo/cache.py
+++ b/tunigo/cache.py
@@ -21,7 +21,7 @@ class Cache(object):
if self._cache_valid(key):
return self._cache[key]['obj']
else:
- return False
+ return None
def inser... | Return None from cache if not found It makes more sense to return None than False for a missing cache entry. | py |
diff --git a/invocations/packaging/release.py b/invocations/packaging/release.py
index <HASH>..<HASH> 100644
--- a/invocations/packaging/release.py
+++ b/invocations/packaging/release.py
@@ -638,6 +638,8 @@ def publish(c, sdist=True, wheel=False, index=None, sign=False, dry_run=False,
When ``None`` (the defaul... | Don't hide publish() output for now | py |
diff --git a/pcef/python/modes/pyflakes_checker.py b/pcef/python/modes/pyflakes_checker.py
index <HASH>..<HASH> 100644
--- a/pcef/python/modes/pyflakes_checker.py
+++ b/pcef/python/modes/pyflakes_checker.py
@@ -15,6 +15,7 @@ import logging
import _ast
from pcef.core import CheckerMode, CheckerMessage
from pcef.core ... | Pyflakes checker only check on save (otherwise wee see error anytime we begin by typing) | py |
diff --git a/dwave/system/composites/virtual_graph.py b/dwave/system/composites/virtual_graph.py
index <HASH>..<HASH> 100644
--- a/dwave/system/composites/virtual_graph.py
+++ b/dwave/system/composites/virtual_graph.py
@@ -282,7 +282,7 @@ class VirtualGraphComposite(dimod.ComposedSampler, dimod.Structured):
if... | Passing chain strength properly to get_flux_biases. | py |
diff --git a/holoviews/plotting/comms.py b/holoviews/plotting/comms.py
index <HASH>..<HASH> 100644
--- a/holoviews/plotting/comms.py
+++ b/holoviews/plotting/comms.py
@@ -3,20 +3,12 @@ import uuid
import sys
import traceback
-from unittest import SkipTest
-
try:
from StringIO import StringIO
except:
fro... | Inlined ipykernel.comm and IPython imports in comms.py | py |
diff --git a/multiqc/modules/stacks/stacks.py b/multiqc/modules/stacks/stacks.py
index <HASH>..<HASH> 100644
--- a/multiqc/modules/stacks/stacks.py
+++ b/multiqc/modules/stacks/stacks.py
@@ -199,8 +199,10 @@ class MultiqcModule(BaseMultiqcModule):
)
config_distribs = {
'id': 'distribs_plo... | Stacks: Fix linegraph linting | py |
diff --git a/src/canari/maltego/transform.py b/src/canari/maltego/transform.py
index <HASH>..<HASH> 100644
--- a/src/canari/maltego/transform.py
+++ b/src/canari/maltego/transform.py
@@ -65,6 +65,9 @@ class Transform(object):
# Specifies a disclaimer for the transform that appears prior to the first execution of a... | Added future `command` placeholder for external transform execution. | py |
diff --git a/docs/source/conf.py b/docs/source/conf.py
index <HASH>..<HASH> 100644
--- a/docs/source/conf.py
+++ b/docs/source/conf.py
@@ -40,6 +40,7 @@ extensions = [
'sphinx.ext.autosummary',
'sphinx.ext.extlinks',
'sphinx.ext.napoleon',
+ 'sphinx.ext.linkcode',
]
napoleon_include_special_with_d... | Docs: Add basic links to the source | py |
diff --git a/tests/test_std.py b/tests/test_std.py
index <HASH>..<HASH> 100644
--- a/tests/test_std.py
+++ b/tests/test_std.py
@@ -274,6 +274,7 @@ class TestConsul(object):
assert [
v['Address'] for k, v in c.agent.services().iteritems()
if k == 'foo'][0] == '10.10.10.1'
+ asse... | clean up state after test_agent_services runs | py |
diff --git a/pupa/cli/commands/update.py b/pupa/cli/commands/update.py
index <HASH>..<HASH> 100644
--- a/pupa/cli/commands/update.py
+++ b/pupa/cli/commands/update.py
@@ -40,7 +40,7 @@ def save_report(report, jurisdiction):
plan = RunPlan.objects.create(jurisdiction_id=jurisdiction, success=report['success'])
... | fixed save_report for when scraper has kwargs | py |
diff --git a/rootpy/logger/magic.py b/rootpy/logger/magic.py
index <HASH>..<HASH> 100644
--- a/rootpy/logger/magic.py
+++ b/rootpy/logger/magic.py
@@ -76,6 +76,10 @@ def get_seh():
ErrorHandlerFunc_t = ctypes.CFUNCTYPE(None, ctypes.c_int, ctypes.c_bool,
ctypes.c_char_p, ctypes.c_char_p)
+ # Required ... | Fix for #<I>, import ROOT to avoid DL issue. | py |
diff --git a/steamfiles/appinfo.py b/steamfiles/appinfo.py
index <HASH>..<HASH> 100644
--- a/steamfiles/appinfo.py
+++ b/steamfiles/appinfo.py
@@ -1,3 +1,4 @@
+import copy
import struct
from collections import OrderedDict
@@ -17,12 +18,11 @@ def loads(content):
def dump(obj, fp):
- for chunk in AppinfoEncod... | [Appinfo] Both dump() and dumps() are now implemented | py |
diff --git a/astroid/node_classes.py b/astroid/node_classes.py
index <HASH>..<HASH> 100644
--- a/astroid/node_classes.py
+++ b/astroid/node_classes.py
@@ -3860,7 +3860,7 @@ class TryExcept(mixins.MultiLineBlockMixin, mixins.BlockRangeMixIn, Statement):
<TryExcept l.2 at 0x7f23b2e9d908>
"""
_astroid_field... | Add missing TryExcept multi-line block field (#<I>) This was overlooked in the initial implementation of _multi_line_block_fields. | py |
diff --git a/phylopandas/seqio/read.py b/phylopandas/seqio/read.py
index <HASH>..<HASH> 100644
--- a/phylopandas/seqio/read.py
+++ b/phylopandas/seqio/read.py
@@ -168,7 +168,8 @@ def read_blast_xml(filename, **kwargs):
'subject_start': [],
'subject_end':[],
'query_start':[],
- ... | made blast parser add uid | py |
diff --git a/src/python/pants/backend/codegen/tasks/code_gen.py b/src/python/pants/backend/codegen/tasks/code_gen.py
index <HASH>..<HASH> 100644
--- a/src/python/pants/backend/codegen/tasks/code_gen.py
+++ b/src/python/pants/backend/codegen/tasks/code_gen.py
@@ -21,7 +21,7 @@ class CodeGen(Task):
@classmethod
d... | Add python as default codegen product. This sits alongside the existing (brittle) hack in codegen that allows downstream goals that only work with python products to trigger codegen before they're run. Testing Done: Running internally at 4sq. CI is green Reviewed at <URL> | py |
diff --git a/sacred/observers/slack.py b/sacred/observers/slack.py
index <HASH>..<HASH> 100644
--- a/sacred/observers/slack.py
+++ b/sacred/observers/slack.py
@@ -32,7 +32,7 @@ class SlackObserver(RunObserver):
icon=":angel:",
priority=DEFAULT_SLACK_PRIORITY,
completed_text=None,
- int... | Fix typo on slack observer. (#<I>) | py |
diff --git a/quark/plugin.py b/quark/plugin.py
index <HASH>..<HASH> 100644
--- a/quark/plugin.py
+++ b/quark/plugin.py
@@ -544,7 +544,9 @@ class Plugin(quantum_plugin_base_v2.QuantumPluginBaseV2):
"""
LOG.info("get_ports for tenant %s filters %s fields %s" %
(context.tenant_id, filter... | Fix for port_find invocation with filters | py |
diff --git a/ELiDE/layout.py b/ELiDE/layout.py
index <HASH>..<HASH> 100644
--- a/ELiDE/layout.py
+++ b/ELiDE/layout.py
@@ -110,6 +110,7 @@ class ELiDELayout(FloatLayout):
self.bind(
selection=self._trigger_reremote
)
+ self._trigger_reremote()
bind_charsh... | necessary for displaying the contents of the charsheet upon startup | py |
diff --git a/contact_form/__init__.py b/contact_form/__init__.py
index <HASH>..<HASH> 100644
--- a/contact_form/__init__.py
+++ b/contact_form/__init__.py
@@ -1,4 +1,4 @@
-VERSION = (0, 3, 2, 'stable')
+VERSION = (0, 3, 3, 'dev')
def get_release(): | running on <I>-dev | py |
diff --git a/morris/__init__.py b/morris/__init__.py
index <HASH>..<HASH> 100644
--- a/morris/__init__.py
+++ b/morris/__init__.py
@@ -562,6 +562,9 @@ class boundmethod(object):
def __init__(self, instance, func):
self.instance = instance
self.func = func
+ if hasattr(func, '__qualname__')... | Set __{qual,}name__ in boundmethod() This patch makes the boundmethod() object look a little more like a function by having __qualname__ and __name__. This makes it compatible with _get_fn_name() | py |
diff --git a/bcbio/rnaseq/dexseq.py b/bcbio/rnaseq/dexseq.py
index <HASH>..<HASH> 100644
--- a/bcbio/rnaseq/dexseq.py
+++ b/bcbio/rnaseq/dexseq.py
@@ -46,6 +46,10 @@ def run_count(bam_file, dexseq_gff, stranded, out_file, data):
logger.info("DEXseq is not installed, skipping exon-level counting.")
ret... | Disabled DEXSeq when the aligner is bwa. | py |
diff --git a/bolt/__init__.py b/bolt/__init__.py
index <HASH>..<HASH> 100644
--- a/bolt/__init__.py
+++ b/bolt/__init__.py
@@ -8,6 +8,7 @@ import sys
from _bterror import InvalidTask
from _btregistry import TaskRegistry
+from _btutils import load_script
_registry = TaskRegistry()
@@ -39,7 +40,9 @@ def run():
... | Loading bolt file as a module | py |
diff --git a/cwltool/draft2tool.py b/cwltool/draft2tool.py
index <HASH>..<HASH> 100644
--- a/cwltool/draft2tool.py
+++ b/cwltool/draft2tool.py
@@ -125,6 +125,19 @@ def check_adjust(builder, f):
raise WorkflowException("Invalid filename: '%s' contains illegal characters" % (f["basename"]))
return f
+def ... | Fix to compute checksums and record file sizes for secondaryFiles. (#<I>) | py |
diff --git a/AegeanTools/AeRes.py b/AegeanTools/AeRes.py
index <HASH>..<HASH> 100644
--- a/AegeanTools/AeRes.py
+++ b/AegeanTools/AeRes.py
@@ -1,8 +1,16 @@
-import logging
+#! /usr/bin/env python
+"""
+Aegean Residual (AeRes) has the following capability:
+- convert a catalogue into an image model
+- subtract image mod... | add shebang and docstring | py |
diff --git a/uriutils/storages.py b/uriutils/storages.py
index <HASH>..<HASH> 100644
--- a/uriutils/storages.py
+++ b/uriutils/storages.py
@@ -77,10 +77,13 @@ class BaseURI(object):
"""
:param dict storage_args: Arguments that will be applied to the storage system for read/write operations
""... | Fix issues with `storage_args` in file | py |
diff --git a/zappa/handler.py b/zappa/handler.py
index <HASH>..<HASH> 100644
--- a/zappa/handler.py
+++ b/zappa/handler.py
@@ -109,7 +109,7 @@ class LambdaHandler:
try:
cdll.LoadLibrary(os.path.join(os.getcwd(), library))
except OSError:
- ... | show filename when failing to load libray (#<I>) this is to help debugging | py |
diff --git a/rqalpha/main.py b/rqalpha/main.py
index <HASH>..<HASH> 100644
--- a/rqalpha/main.py
+++ b/rqalpha/main.py
@@ -29,7 +29,6 @@ from rqalpha.core.strategy import Strategy
from rqalpha.core.strategy_context import StrategyContext
from rqalpha.core.executor import Executor
from rqalpha.data.base_data_source i... | fix: rqdatac init missed in main.run | py |
diff --git a/angr/engines/vex/claripy/ccall.py b/angr/engines/vex/claripy/ccall.py
index <HASH>..<HASH> 100644
--- a/angr/engines/vex/claripy/ccall.py
+++ b/angr/engines/vex/claripy/ccall.py
@@ -42,9 +42,9 @@ def boolean_extend(O, a, b, size):
def op_concretize(op):
if type(op) is int:
return op
- op ... | Use original op in CCallMultivaluedException to make _perform_vex_expr_CCall happy (#<I>) | py |
diff --git a/acos_client/v30/slb/virtual_port.py b/acos_client/v30/slb/virtual_port.py
index <HASH>..<HASH> 100644
--- a/acos_client/v30/slb/virtual_port.py
+++ b/acos_client/v30/slb/virtual_port.py
@@ -204,8 +204,8 @@ class VirtualPort(base.BaseV30):
):
# backward compatiable for a10-neutron-lbaas
- ... | STACK-<I> l7policy delete failed | py |
diff --git a/netpyne/support/morphology.py b/netpyne/support/morphology.py
index <HASH>..<HASH> 100644
--- a/netpyne/support/morphology.py
+++ b/netpyne/support/morphology.py
@@ -65,7 +65,7 @@ def load(filename, fileformat=None, cell=None, use_axon=True, xshift=0, yshift=0
"""
if cell is None:
- cell... | Fixed bug in netpyne/support/morphology | py |
diff --git a/oscrypto/_win/tls.py b/oscrypto/_win/tls.py
index <HASH>..<HASH> 100644
--- a/oscrypto/_win/tls.py
+++ b/oscrypto/_win/tls.py
@@ -634,12 +634,12 @@ class TLSSocket(object):
)
handle_crypt32_error(result)
+ cert_context = unwrap(cert_context_pointer)
+ cert_... | Explicitly check certificate signature type during Windows TLS extra root validation | py |
diff --git a/openquake/calculators/classical.py b/openquake/calculators/classical.py
index <HASH>..<HASH> 100644
--- a/openquake/calculators/classical.py
+++ b/openquake/calculators/classical.py
@@ -424,11 +424,11 @@ class ClassicalCalculator(PSHACalculator):
self.datastore.set_attrs('hcurves', nbytes=totb... | Monitored sending pmaps Former-commit-id: f<I>c8c<I>e<I>b<I>d2d0a<I>a1c5a<I>e<I>e<I> | py |
diff --git a/pyecobee/__init__.py b/pyecobee/__init__.py
index <HASH>..<HASH> 100644
--- a/pyecobee/__init__.py
+++ b/pyecobee/__init__.py
@@ -87,7 +87,7 @@ class Ecobee(object):
return
self.authorization_code = request.json()['code']
self.pin = request.json()['ecobeePin']
- logger... | Update request_pin method Change log level of authorization message to info from error so that this information is not unnecessarily surfaced to a Home Assistant user (config flow will handle displaying information about the authorization steps to the user). | py |
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