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diff --git a/src/collectors/cpu/cpu.py b/src/collectors/cpu/cpu.py index <HASH>..<HASH> 100644 --- a/src/collectors/cpu/cpu.py +++ b/src/collectors/cpu/cpu.py @@ -144,6 +144,7 @@ class CPUCollector(diamond.collector.Collector): file.close() metrics = {} + metrics['ncpus'] = ncpus ...
(minor) add ncpus metric - amount of CPU threads
py
diff --git a/aikif/programs.py b/aikif/programs.py index <HASH>..<HASH> 100644 --- a/aikif/programs.py +++ b/aikif/programs.py @@ -1,9 +1,6 @@ -# program.py written by Duncan Murray 18/4/2014 -# part of AIKIF -# standard set of programs used for each interface in ccd -# each having the same functions (at this stage ...
updated program.py with correct header and call to file_mapper
py
diff --git a/leonardo/module/web/widgets/views.py b/leonardo/module/web/widgets/views.py index <HASH>..<HASH> 100644 --- a/leonardo/module/web/widgets/views.py +++ b/leonardo/module/web/widgets/views.py @@ -85,6 +85,7 @@ class WidgetUpdateView(WidgetViewMixin, UpdateView): def get_context_data(self, **kwargs): ...
Relative path of update view action
py
diff --git a/figment/cli.py b/figment/cli.py index <HASH>..<HASH> 100644 --- a/figment/cli.py +++ b/figment/cli.py @@ -4,6 +4,7 @@ import readline import logging import os import shutil +import sys from functools import wraps from figment.zone import Zone @@ -108,5 +109,9 @@ def cli(): .arg('-d', '--deb...
Show usage if no arguments were provided
py
diff --git a/django_q/conf.py b/django_q/conf.py index <HASH>..<HASH> 100644 --- a/django_q/conf.py +++ b/django_q/conf.py @@ -1,4 +1,5 @@ import logging +from copy import deepcopy from signal import signal from multiprocessing import cpu_count, Queue @@ -50,6 +51,9 @@ class Conf(object): # ORM broker OR...
Fixes issue with rollbar configuration
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -3,6 +3,12 @@ from distutils.core import setup from setuptools import find_packages +# Read the contents of your README file +from os import path +this_directory = path.abspath(path.dirname(__file__)) +with open(path.join(...
Update setup.py to load text from README.md
py
diff --git a/pymatgen/ext/tests/test_jhu.py b/pymatgen/ext/tests/test_jhu.py index <HASH>..<HASH> 100644 --- a/pymatgen/ext/tests/test_jhu.py +++ b/pymatgen/ext/tests/test_jhu.py @@ -9,6 +9,7 @@ import os from pymatgen.util.testing import PymatgenTest from pymatgen.ext.jhu import get_kpoints from pymatgen.io.vasp.in...
fix jhu issue (#<I>)
py
diff --git a/cmapPy/clue_api_client/tests/test_pert_queries.py b/cmapPy/clue_api_client/tests/test_pert_queries.py index <HASH>..<HASH> 100644 --- a/cmapPy/clue_api_client/tests/test_pert_queries.py +++ b/cmapPy/clue_api_client/tests/test_pert_queries.py @@ -18,9 +18,9 @@ class TestPertQueries(unittest.TestCase): ...
test_pert_queries.py: use assertEqual, consistent with other code This was suggested by 2to3, and may as well commit it.
py
diff --git a/psqlparse/nodes/parsenodes.py b/psqlparse/nodes/parsenodes.py index <HASH>..<HASH> 100644 --- a/psqlparse/nodes/parsenodes.py +++ b/psqlparse/nodes/parsenodes.py @@ -30,6 +30,7 @@ class SelectStmt(Statement): self.sort_clause = build_from_item(obj, 'sortClause') self.limit_offset = buil...
Extract also the statement's limit count
py
diff --git a/km3pipe/logger.py b/km3pipe/logger.py index <HASH>..<HASH> 100644 --- a/km3pipe/logger.py +++ b/km3pipe/logger.py @@ -23,6 +23,16 @@ __status__ = "Development" loggers = {} # this holds all the registered loggers # logging.basicConfig() +DEPRECATION = 45 +logging.addLevelName(DEPRECATION, "DEPRECATI...
Add deprecation method to loggers
py
diff --git a/src/dependencies/_injector.py b/src/dependencies/_injector.py index <HASH>..<HASH> 100644 --- a/src/dependencies/_injector.py +++ b/src/dependencies/_injector.py @@ -59,20 +59,15 @@ class InjectorType(type): current_attr = attrs_stack.pop() have_default = False ...
Do not raise the same exception twice.
py
diff --git a/src/transformers/modeling_tf_t5.py b/src/transformers/modeling_tf_t5.py index <HASH>..<HASH> 100644 --- a/src/transformers/modeling_tf_t5.py +++ b/src/transformers/modeling_tf_t5.py @@ -491,6 +491,7 @@ class TFT5MainLayer(tf.keras.layers.Layer): all_attentions = all_attentions + (layer_out...
adding back last dropout in TF <I> T5
py
diff --git a/autolab_core/yaml_config.py b/autolab_core/yaml_config.py index <HASH>..<HASH> 100644 --- a/autolab_core/yaml_config.py +++ b/autolab_core/yaml_config.py @@ -147,3 +147,17 @@ class YamlConfig(object): yaml.resolver.BaseResolver.DEFAULT_MAPPING_TAG, lambda loader, node: object_pair...
Added support for iterating over YamlConfig.
py
diff --git a/nox.py b/nox.py index <HASH>..<HASH> 100644 --- a/nox.py +++ b/nox.py @@ -10,8 +10,6 @@ # See the License for the specific language governing permissions and # limitations under the License. -from __future__ import print_function - import glob import os import shutil
Removing `print()` import in `nox.py`. It is a remnant of a version when `print(..., file=sys.stderr)` was used.
py
diff --git a/tests/unit/test_cufflinks.py b/tests/unit/test_cufflinks.py index <HASH>..<HASH> 100644 --- a/tests/unit/test_cufflinks.py +++ b/tests/unit/test_cufflinks.py @@ -21,11 +21,8 @@ class TestCufflinks(unittest.TestCase): dirty_fn = os.path.join(self.out_dir, "dirty.gtf") clean, dirty = cuffli...
Remove some cruft from the cufflinks test.
py
diff --git a/temperusb/cli.py b/temperusb/cli.py index <HASH>..<HASH> 100644 --- a/temperusb/cli.py +++ b/temperusb/cli.py @@ -46,11 +46,11 @@ def main(): dev.set_sensor_count(int(args.sensor_count)) if args.sensor_ids == 'all': - args.sensor_ids = range(dev.get_sensor_count()) + ...
Fix for traceback when multiple devices attached
py
diff --git a/raiden/transfer/mediated_transfer/state.py b/raiden/transfer/mediated_transfer/state.py index <HASH>..<HASH> 100644 --- a/raiden/transfer/mediated_transfer/state.py +++ b/raiden/transfer/mediated_transfer/state.py @@ -239,14 +239,6 @@ class TargetTransferState(State): ONCHAIN_UNLOCK = "onchain_unlock"...
Removed unused list of states from target state
py
diff --git a/scripts/install-dependencies.py b/scripts/install-dependencies.py index <HASH>..<HASH> 100644 --- a/scripts/install-dependencies.py +++ b/scripts/install-dependencies.py @@ -28,7 +28,7 @@ def run(cmd): # libuv mkdirp(deps_dir) ## todo: This may not work with older git versions (http://stackoverflow.com/...
uv: upgrade to latest version <I>
py
diff --git a/uproot/_help.py b/uproot/_help.py index <HASH>..<HASH> 100644 --- a/uproot/_help.py +++ b/uproot/_help.py @@ -1244,7 +1244,7 @@ u"""Interface for interpretations. Arrays and other collections are filled from ROOT in two stages: raw bytes from each basket are interpreted as a "source" and sources are...
[skip ci] try this
py
diff --git a/python/tensorflowjs/converters/converter.py b/python/tensorflowjs/converters/converter.py index <HASH>..<HASH> 100644 --- a/python/tensorflowjs/converters/converter.py +++ b/python/tensorflowjs/converters/converter.py @@ -296,7 +296,7 @@ def _parse_quantization_bytes(quantization_bytes): raise ValueEr...
refactor: fix variable name typo (#<I>) MISC arugments -> arguments
py
diff --git a/tensorlayer/layers.py b/tensorlayer/layers.py index <HASH>..<HASH> 100644 --- a/tensorlayer/layers.py +++ b/tensorlayer/layers.py @@ -115,13 +115,14 @@ def set_name_reuse(enable=True): """ set_keep['name_reuse'] = enable -def initialize_rnn_state(state): +def initialize_rnn_state(state, feed_di...
add the feed_dict argument for initialize_rnn_state
py
diff --git a/src/spead2/__init__.py b/src/spead2/__init__.py index <HASH>..<HASH> 100644 --- a/src/spead2/__init__.py +++ b/src/spead2/__init__.py @@ -349,7 +349,8 @@ class Item(Descriptor): .. warning:: If you modify a mutable value in-place, the change will not be detected, and by default :py:meth...
Refine the warning about modifying data in-place.
py
diff --git a/indra/ontology/bio/ontology.py b/indra/ontology/bio/ontology.py index <HASH>..<HASH> 100644 --- a/indra/ontology/bio/ontology.py +++ b/indra/ontology/bio/ontology.py @@ -231,11 +231,15 @@ class BioOntology(IndraOntology): # Here we assume if no namespace is given, then # w...
Fix handling of undefined from/to ns
py
diff --git a/skyfield/planets.py b/skyfield/planets.py index <HASH>..<HASH> 100644 --- a/skyfield/planets.py +++ b/skyfield/planets.py @@ -16,5 +16,5 @@ uranus = ephemeris.uranus neptune = ephemeris.neptune pluto = ephemeris.pluto -nine_planets = [mercury, venus, earth, mars, - jupiter, saturn, uranu...
Add `eight_planets` list beside `nine_planets` Just in case Mike Brown ever looks at Skyfield.
py
diff --git a/src/shellingham/__init__.py b/src/shellingham/__init__.py index <HASH>..<HASH> 100644 --- a/src/shellingham/__init__.py +++ b/src/shellingham/__init__.py @@ -4,7 +4,7 @@ import os from ._core import ShellDetectionFailure -__version__ = '1.3.2' +__version__ = '1.3.3dev0' def detect_shell(pid=None,...
Prebump to <I>dev0
py
diff --git a/pysat/instruments/timed_saber.py b/pysat/instruments/timed_saber.py index <HASH>..<HASH> 100644 --- a/pysat/instruments/timed_saber.py +++ b/pysat/instruments/timed_saber.py @@ -3,6 +3,20 @@ (SABER) instrument on the Thermosphere Ionosphere Mesosphere Energetics Dynamics (TIMED) satellite. +Properties ...
DOC: move rules of the road to note
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -6,15 +6,20 @@ from setuptools import setup, find_packages if sys.argv[-1] == 'test': nosetests = 'nosetests -v --with-coverage --cover-package=rauth' + coverage = ('grep ^TOTAL test.log | grep 100% >/dev/null ||' +...
enforcing testing coverage requirements
py
diff --git a/ez_setup.py b/ez_setup.py index <HASH>..<HASH> 100644 --- a/ez_setup.py +++ b/ez_setup.py @@ -344,7 +344,8 @@ def _resolve_version(version): if version is not LATEST: return version - with urlopen('https://pypi.python.org/pypi/setuptools/json') as resp: + resp = urlopen('https://pypi....
Use contextlib.closing for the response
py
diff --git a/tests/integration/cqlengine/model/test_updates.py b/tests/integration/cqlengine/model/test_updates.py index <HASH>..<HASH> 100644 --- a/tests/integration/cqlengine/model/test_updates.py +++ b/tests/integration/cqlengine/model/test_updates.py @@ -17,6 +17,7 @@ from uuid import uuid4 from mock import patch ...
Skipped test class is C* is lower than <I>
py
diff --git a/spyder/plugins/ipythonconsole/plugin.py b/spyder/plugins/ipythonconsole/plugin.py index <HASH>..<HASH> 100644 --- a/spyder/plugins/ipythonconsole/plugin.py +++ b/spyder/plugins/ipythonconsole/plugin.py @@ -443,7 +443,7 @@ class IPythonConsole(SpyderDockablePlugin): Notes ----- - ...
IPython console: Remove missing word in docstring
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -13,6 +13,7 @@ setup( long_description=open('README.txt').read(), install_requires=[ 'nose >= 1.0', + 'pyaixi >= 1.0' ], classifiers = [ 'Development Status :: 2 - Pre-Alpha',
adding pyaixi to setup as dependancy
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -1,7 +1,8 @@ # -*- coding: utf-8 -*- import os - import re +import sys + VERSIONFILE = "folium/__init__.py" verstrline = open(VERSIONFILE, "rt").read() VSRE = r"^__version__ = ['\"]([^'\"]*)['\"]" @@ -11,6 +12,16 @@ if m...
Easy tag and publish via `setup.py`.
py
diff --git a/pypercube/time_utils.py b/pypercube/time_utils.py index <HASH>..<HASH> 100644 --- a/pypercube/time_utils.py +++ b/pypercube/time_utils.py @@ -19,12 +19,16 @@ def now(): return datetime.utcnow() -def yesterday(): - return now() - timedelta(days=1) +def yesterday(start=None): + if start is Non...
time_utils.yesterday and .last_week take an optional start time.
py
diff --git a/fragments/commands.py b/fragments/commands.py index <HASH>..<HASH> 100644 --- a/fragments/commands.py +++ b/fragments/commands.py @@ -377,8 +377,8 @@ def _main(): # pragma: no cover print(l) except StopIteration: break - except ExecutionErro...
catch FragmentsError here and print the error also print the error in Python 3 friendly fashion
py
diff --git a/alot/buffers.py b/alot/buffers.py index <HASH>..<HASH> 100644 --- a/alot/buffers.py +++ b/alot/buffers.py @@ -158,7 +158,7 @@ class SearchBuffer(Buffer): Buffer.__init__(self, ui, self.body) def __str__(self): - formatstring = '[search] for "%s" (%d thread%s)' + formatstring =...
fix: misleading statusline in search mode .. said (n threads) where n was actually the number of matching messages. this is a hotfix that simply changes this string issue #<I>
py
diff --git a/tests/test_stateful_browser.py b/tests/test_stateful_browser.py index <HASH>..<HASH> 100644 --- a/tests/test_stateful_browser.py +++ b/tests/test_stateful_browser.py @@ -524,7 +524,7 @@ def test_referer_submit_headers(httpbin): @pytest.mark.parametrize('expected, kwargs', [ pytest.param('/foo', {},...
Fix bs4 deprecation warning > DeprecationWarning: The 'text' argument to find()-type methods is > deprecated. Use 'string' instead. The 'string' argument was added in bs4 <I>, so it will work for all allowed bs4 versions in MechanicalSoup (<I>+). The 'text' argument was deprecated in bs4 <I>.
py
diff --git a/betfair/models.py b/betfair/models.py index <HASH>..<HASH> 100644 --- a/betfair/models.py +++ b/betfair/models.py @@ -330,6 +330,7 @@ class ItemDescription(BetfairModel): class ClearedOrderSummary(BetfairModel): + bet_outcome = StringType() event_type_id = StringType() event_id = StringTy...
Adding the missing field "bet_outcome" Hey mate, According the model definition at [betfair docs](<URL>) for the model *ClearedOrderSummary*, it should contain also the *bet_outcome*. I have added it to save you the pain. Works just fine for me ;)
py
diff --git a/custom.py b/custom.py index <HASH>..<HASH> 100644 --- a/custom.py +++ b/custom.py @@ -146,13 +146,7 @@ class CustomProperty(StructuredProperty): # etc. ) - def _to_top(self, value): - assert isinstance(value, self._mo...
Upgrade custo.py to the new names.
py
diff --git a/numina/user.py b/numina/user.py index <HASH>..<HASH> 100644 --- a/numina/user.py +++ b/numina/user.py @@ -156,6 +156,7 @@ def print_obsmode(obsmode): print '%s: %s' % (obsmode.name, obsmode.summary) print 'Instrument:', obsmode.instrument print 'Recipe:', obsmode.recipe + print 'Key:', ob...
Observing modes now show their short name (key)
py
diff --git a/src/tests/unit_tests/test_pred_prob.py b/src/tests/unit_tests/test_pred_prob.py index <HASH>..<HASH> 100644 --- a/src/tests/unit_tests/test_pred_prob.py +++ b/src/tests/unit_tests/test_pred_prob.py @@ -190,6 +190,7 @@ def test_predictive_probability_unobserved(seed=0): Y = [(N_ROWS, 1, 1.6)] val ...
Perform type checking for predprob, float not array.
py
diff --git a/bugwarrior/command.py b/bugwarrior/command.py index <HASH>..<HASH> 100644 --- a/bugwarrior/command.py +++ b/bugwarrior/command.py @@ -82,7 +82,7 @@ def pull(dry_run, flavor, interactive, debug): ) ) except RuntimeError as e: - log.critical("Aborted (%s)" % e) + log....
Log exceptions during command execution with their backtrace
py
diff --git a/bquery/ctable.py b/bquery/ctable.py index <HASH>..<HASH> 100644 --- a/bquery/ctable.py +++ b/bquery/ctable.py @@ -275,7 +275,7 @@ class ctable(bcolz.ctable): eval_str = '' previous_value = 1 for col, values \ - in zip(reversed(groupby_cols), reverse...
check for overflow situation and use compound key method
py
diff --git a/premailer/__init__.py b/premailer/__init__.py index <HASH>..<HASH> 100644 --- a/premailer/__init__.py +++ b/premailer/__init__.py @@ -1,3 +1,3 @@ from premailer import Premailer, transform -__version__ = '1.2.3' +__version__ = '1.3.0'
bump to version <I> because of new features
py
diff --git a/webdriver_test_tools/webdriver/actions/scroll.py b/webdriver_test_tools/webdriver/actions/scroll.py index <HASH>..<HASH> 100644 --- a/webdriver_test_tools/webdriver/actions/scroll.py +++ b/webdriver_test_tools/webdriver/actions/scroll.py @@ -58,7 +58,6 @@ def to_element(driver, element, offset=0, align_to_...
Removed TODO Tested scroll.into_view_fixed_nav() and it appears to be working
py
diff --git a/pyprophet/levels_contexts.py b/pyprophet/levels_contexts.py index <HASH>..<HASH> 100644 --- a/pyprophet/levels_contexts.py +++ b/pyprophet/levels_contexts.py @@ -492,7 +492,7 @@ def merge_osw(infiles, outfile, templatefile, same_run, merge_post_scored_runs): if reduced: merge_oswr(infiles, ...
[FEATURE: Merge UPDATE]: Correct else if statement for def merge_osw
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -1,4 +1,4 @@ -from distutils.core import setup +from setuptools import setup setup( name='hyp',
Use setuptools rather than distutils
py
diff --git a/bcbio/qc/multiqc.py b/bcbio/qc/multiqc.py index <HASH>..<HASH> 100644 --- a/bcbio/qc/multiqc.py +++ b/bcbio/qc/multiqc.py @@ -291,6 +291,11 @@ def _create_config_file(out_dir, samples): else: thresholds_hidden.append(t) + # Hide coverage unless running full qu...
QC: avoid qualimap coverage thresholds when downsampling Avoids confusing output for coverage results when not using a full BAM.
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -3,6 +3,7 @@ # $Id$ import os +import sys from setuptools import find_packages from distutils.cmd import Command @@ -15,6 +16,11 @@ class DisabledTestCommand(Command): _this_dir = os.path.dirname(__file__) _l...
Fix for incorrect dateutil version under python 2
py
diff --git a/python/phonenumbers/__init__.py b/python/phonenumbers/__init__.py index <HASH>..<HASH> 100644 --- a/python/phonenumbers/__init__.py +++ b/python/phonenumbers/__init__.py @@ -146,7 +146,7 @@ from .phonenumbermatcher import PhoneNumberMatch, PhoneNumberMatcher, Leniency # Version number is taken from the ...
Prep for <I> release
py
diff --git a/libcnml/__init__.py b/libcnml/__init__.py index <HASH>..<HASH> 100644 --- a/libcnml/__init__.py +++ b/libcnml/__init__.py @@ -27,7 +27,7 @@ logger = logging.getLogger(__name__) # To change the logging level of libcnml use this code in your program: # import libcnml # import logging -# libcnml.logger....
[libcnml] typo
py
diff --git a/tests/unit/modules/timezone_test.py b/tests/unit/modules/timezone_test.py index <HASH>..<HASH> 100644 --- a/tests/unit/modules/timezone_test.py +++ b/tests/unit/modules/timezone_test.py @@ -19,6 +19,8 @@ ensure_in_syspath('../../') # Import Salt Libs from salt.modules import timezone +import salt.ext.s...
[PY3] Fix timezone module unit tests When writing to a file, the string needs to be converted to bytes first.
py
diff --git a/cirq/_version.py b/cirq/_version.py index <HASH>..<HASH> 100644 --- a/cirq/_version.py +++ b/cirq/_version.py @@ -14,4 +14,4 @@ """Define version number here and read it from setup.py automatically""" -__version__ = "0.4.0.dev42" +__version__ = "0.4.0"
Release version <I> (#<I>)
py
diff --git a/simuvex/procedures/libc___so___6/sleep.py b/simuvex/procedures/libc___so___6/sleep.py index <HASH>..<HASH> 100644 --- a/simuvex/procedures/libc___so___6/sleep.py +++ b/simuvex/procedures/libc___so___6/sleep.py @@ -10,7 +10,7 @@ class sleep(simuvex.SimProcedure): def run(self, seconds): #pylin...
Pass the correct number of args to SimTypeInt in sleep
py
diff --git a/pypeerassets/provider/mintr.py b/pypeerassets/provider/mintr.py index <HASH>..<HASH> 100644 --- a/pypeerassets/provider/mintr.py +++ b/pypeerassets/provider/mintr.py @@ -104,6 +104,7 @@ class Mintr: for t in raw["transactions"]: raw["tx"].append(t["tx_hash"]) + ra...
mintr: return blockheight as integer
py
diff --git a/lib/webcomment_webinterface.py b/lib/webcomment_webinterface.py index <HASH>..<HASH> 100644 --- a/lib/webcomment_webinterface.py +++ b/lib/webcomment_webinterface.py @@ -53,6 +53,7 @@ from invenio.search_engine import create_navtrail_links, \ get_colID from invenio.urlutils import redirect_to_url, \...
installation: upgrade to local/CDN MathJax <I> * Updates install script to work with MathJax <I> (from GitHub). Adds new CFG_MATHJAX_HOSTING variable to choose between locally hosted MathJax and CDN served MathJax libraries. (closes #<I>) * Note: local MathJax <I> seems to crash Google Chrome <I> on Linux. YMMV...
py
diff --git a/anyconfig/backends.py b/anyconfig/backends.py index <HASH>..<HASH> 100644 --- a/anyconfig/backends.py +++ b/anyconfig/backends.py @@ -149,10 +149,12 @@ _PARSERS_BY_TYPE = tuple(_list_parsers_by_type(PARSERS)) _PARSERS_BY_EXT = tuple(_list_parsers_by_extension(PARSERS)) -def _find_by_filepath(filepath,...
refactor: rename .backends._find_by_filepath - rename .backends._find_by_filepath to find_by_filepath - fix the description of its parameter, cps
py
diff --git a/salt/states/network.py b/salt/states/network.py index <HASH>..<HASH> 100644 --- a/salt/states/network.py +++ b/salt/states/network.py @@ -14,13 +14,12 @@ eth0: - managed - enabled: True - type: eth - - ipv4: - - proto: none - - ipaddress: 10.1.0.1 - - netmask: 255.255.255.0...
Change the sls to show the new yaml format.
py
diff --git a/swift/storage.py b/swift/storage.py index <HASH>..<HASH> 100644 --- a/swift/storage.py +++ b/swift/storage.py @@ -75,6 +75,7 @@ class SwiftStorage(Storage): _token_creation_time = 0 _token = '' name_prefix = setting('SWIFT_NAME_PREFIX', '') + full_listing = setting('SWIFT_FULL_LISTING', T...
Optimizes directory listing and ensures retrieve whole listing. (#<I>)
py
diff --git a/openquake/commonlib/source.py b/openquake/commonlib/source.py index <HASH>..<HASH> 100644 --- a/openquake/commonlib/source.py +++ b/openquake/commonlib/source.py @@ -171,7 +171,7 @@ class SourceGroup(collections.Sequence): self.max_mag = max_mag self.id = id if sources: - ...
Sorted by source_id too Former-commit-id: 6b<I>a<I>db<I>e5b<I>ffd<I>c<I>de5c<I>c<I>c
py
diff --git a/annotationengine/annotation.py b/annotationengine/annotation.py index <HASH>..<HASH> 100644 --- a/annotationengine/annotation.py +++ b/annotationengine/annotation.py @@ -130,7 +130,7 @@ def _import_dataframe_thread(args): def import_dataframe(db, dataset, annotation_type, df, user_id, - ...
tweaking block size and number of threads
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -29,6 +29,7 @@ setup( zip_safe=False, platforms='any', install_requires=[ + 'setuptools', 'Flask' ], classifiers=[
Silence a warning when using zc.buildout: "uses namespace packages but the distribution does not require setuptools"
py
diff --git a/fbchat_archive_parser/name_resolver.py b/fbchat_archive_parser/name_resolver.py index <HASH>..<HASH> 100644 --- a/fbchat_archive_parser/name_resolver.py +++ b/fbchat_archive_parser/name_resolver.py @@ -156,6 +156,10 @@ class FacebookNameResolver(object): class DummyNameResolver(FacebookNameResolver): ...
fix dummy parser to not try to go online
py
diff --git a/emannotationschemas/models.py b/emannotationschemas/models.py index <HASH>..<HASH> 100644 --- a/emannotationschemas/models.py +++ b/emannotationschemas/models.py @@ -17,6 +17,7 @@ from typing import Sequence import logging Base = declarative_base() +FlatBase = declarative_base() field_column_map = {...
seperate declarative base for flat schemas to allow similar table names
py
diff --git a/extension.py b/extension.py index <HASH>..<HASH> 100644 --- a/extension.py +++ b/extension.py @@ -31,9 +31,11 @@ class Extension: the full name of the extension, including any packages -- ie. *not* a filename or pathname, but Python dotted name sources : [string] - list of C...
Revised docstring so 'sources' isn't necessarily all C/C++ files (to accomodate SWIG interface files, resource files, etc.).
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -25,7 +25,7 @@ def read(fname): return io.open(file_path, encoding='utf-8').read() -version = '0.8.4.dev0' +version = '0.8.3' setuptools.setup(
Preparing release <I>
py
diff --git a/versionner/version.py b/versionner/version.py index <HASH>..<HASH> 100644 --- a/versionner/version.py +++ b/versionner/version.py @@ -139,7 +139,8 @@ class VersionFile(): with tempfile.NamedTemporaryFile(mode="w", delete=False) as fh: fh.write(str(version)) - shutil.copystat(...
VersionFile.write: copy stat only if src file already exists
py
diff --git a/tests.py b/tests.py index <HASH>..<HASH> 100755 --- a/tests.py +++ b/tests.py @@ -193,7 +193,7 @@ class TestUniqueKeys(SaveAndSelect): def test_two(self): scraperwiki.sqlite.save(['foo', 'bar'], {"foo": 3, 'bar': 9}, u'Harpo') observed = scraperwiki.sqlite.execute( - u'PRA...
Change tests to reflect _unique on the end of unique index names
py
diff --git a/perceval/_version.py b/perceval/_version.py index <HASH>..<HASH> 100644 --- a/perceval/_version.py +++ b/perceval/_version.py @@ -1,2 +1,2 @@ # Versions compliant with PEP 440 https://www.python.org/dev/peps/pep-0440 -__version__ = "0.9.10" +__version__ = "0.9.11"
Update version number to <I>
py
diff --git a/pliers/stimuli/video.py b/pliers/stimuli/video.py index <HASH>..<HASH> 100644 --- a/pliers/stimuli/video.py +++ b/pliers/stimuli/video.py @@ -86,7 +86,7 @@ class VideoFrameCollectionStim(Stim): frame_num = self.frame_index[index] onset = float(frame_num) / self.fps - if index < s...
fixed oboe in video frame duration calculation
py
diff --git a/PySimpleGUIQt/PySimpleGUIQt.py b/PySimpleGUIQt/PySimpleGUIQt.py index <HASH>..<HASH> 100644 --- a/PySimpleGUIQt/PySimpleGUIQt.py +++ b/PySimpleGUIQt/PySimpleGUIQt.py @@ -456,13 +456,18 @@ class Element(): def Update(self, widget, background_color=None, text_color=None, font=None, visible=None): ...
Window.BringToFront() implemented. Fix for element Update that uses colors
py
diff --git a/lib/webuser.py b/lib/webuser.py index <HASH>..<HASH> 100644 --- a/lib/webuser.py +++ b/lib/webuser.py @@ -108,7 +108,7 @@ def page_not_authorized(req, referer='', uid='', text='', navtrail='', ln=CFG_SI @param referer: in case the displayed message propose a login link, this is the url to retur...
Cleaned page_not_authorized calls.
py
diff --git a/scs_core/sys/device_id.py b/scs_core/sys/device_id.py index <HASH>..<HASH> 100644 --- a/scs_core/sys/device_id.py +++ b/scs_core/sys/device_id.py @@ -40,7 +40,7 @@ class DeviceID(PersistentJSONable): model_name = jdict.get('model') configuration = jdict.get('config') - serial_num...
Updated DeviceID to accept non-numeric serial numbers.
py
diff --git a/nidmresults/exporter.py b/nidmresults/exporter.py index <HASH>..<HASH> 100644 --- a/nidmresults/exporter.py +++ b/nidmresults/exporter.py @@ -288,7 +288,9 @@ ons#") self.doc.wasGeneratedBy(bundle_id, time=str(ctime)) else: # provn - self.bundle.wasGeneratedBy(s...
fix: bundle wasGeneratedBy activity Discussed in <URL>
py
diff --git a/ginga/rv/plugins/Thumbs.py b/ginga/rv/plugins/Thumbs.py index <HASH>..<HASH> 100644 --- a/ginga/rv/plugins/Thumbs.py +++ b/ginga/rv/plugins/Thumbs.py @@ -751,13 +751,16 @@ class Thumbs(GingaPlugin.GlobalPlugin): xt = self._cmxoff + (col * twd_hplus) yt = self._cmyoff + (row * twd_vplus) +...
Adjust positioning of text from image in Thumbs
py
diff --git a/cuttlepool/cuttlepool.py b/cuttlepool/cuttlepool.py index <HASH>..<HASH> 100644 --- a/cuttlepool/cuttlepool.py +++ b/cuttlepool/cuttlepool.py @@ -236,6 +236,12 @@ class PoolConnection(object): self._connection = connection self._pool = pool + def __enter__(self): + return self...
get_connection() can now be used as a context manager (resolve #<I>)
py
diff --git a/binstar_client/commands/login.py b/binstar_client/commands/login.py index <HASH>..<HASH> 100644 --- a/binstar_client/commands/login.py +++ b/binstar_client/commands/login.py @@ -82,5 +82,7 @@ def add_parser(subparsers): subparser = subparsers.add_parser('login', ...
DOC: added help string for hostname argument
py
diff --git a/src/toil/jobStores/azureJobStore.py b/src/toil/jobStores/azureJobStore.py index <HASH>..<HASH> 100644 --- a/src/toil/jobStores/azureJobStore.py +++ b/src/toil/jobStores/azureJobStore.py @@ -350,7 +350,8 @@ class AzureJobStore(AbstractJobStore): return 'a' + filter(lambda x: x.isalnum(), tableName)...
Fix: Azure job store used incorrect block size
py
diff --git a/src/gui/run_gui.py b/src/gui/run_gui.py index <HASH>..<HASH> 100644 --- a/src/gui/run_gui.py +++ b/src/gui/run_gui.py @@ -32,7 +32,7 @@ def run_gui(fname = 'C:\Users\Experiment\PycharmProjects\user_data\pythonlab_con app = QtGui.QApplication(sys.argv) # fname = 'c:\\b26_tmp\\pythonlab_config_dumm...
Added smart x-axis rescaling (changing units) to plot_pulse --- needs to be teste though
py
diff --git a/astrobase/hatpilc.py b/astrobase/hatpilc.py index <HASH>..<HASH> 100644 --- a/astrobase/hatpilc.py +++ b/astrobase/hatpilc.py @@ -13,6 +13,7 @@ produced by the HATPI prototype system's image-subtraction photometry pipeline. import logging from datetime import datetime from traceback import format_exc +i...
hatpilc: minor fix
py
diff --git a/bandit/backends/smtp.py b/bandit/backends/smtp.py index <HASH>..<HASH> 100644 --- a/bandit/backends/smtp.py +++ b/bandit/backends/smtp.py @@ -16,6 +16,7 @@ class HijackSMTPBackend(HijackBackendMixin, SMTPBackend): class LogOnlySMTPBackend(LogOnlyBackendMixin, SMTPBackend): """ This backend inter...
Update LogOnlySMTPBackend docstring. Not only admin emails are allowed, all approved emails are still sent.
py
diff --git a/xbee/__init__.py b/xbee/__init__.py index <HASH>..<HASH> 100644 --- a/xbee/__init__.py +++ b/xbee/__init__.py @@ -5,7 +5,7 @@ info@n.io """ __title__ = 'xbee' -__version__ = '2.2.5' +__version__ = '2.2.4' __author__ = 'n.io' __license__ = 'MIT'
Reverting version number to allow Jenkins to bump
py
diff --git a/PySimpleGUI.py b/PySimpleGUI.py index <HASH>..<HASH> 100644 --- a/PySimpleGUI.py +++ b/PySimpleGUI.py @@ -1481,7 +1481,7 @@ class Button(Element): self.FileTypes = file_types self.TKButton = None self.Target = target - self.ButtonText = button_text + self.ButtonText...
Added Buttons being detected in FindElementWithFocus
py
diff --git a/multiqc/modules/qualimap/QM_BamQC.py b/multiqc/modules/qualimap/QM_BamQC.py index <HASH>..<HASH> 100644 --- a/multiqc/modules/qualimap/QM_BamQC.py +++ b/multiqc/modules/qualimap/QM_BamQC.py @@ -96,9 +96,12 @@ def parse_genome_results(self, f): for k, r in regexes.items(): r_search = re.search...
Avoid converting bam names to float sometimes an input file will match and be converted to a number - which causes later assumption about about it being a string to fail. fixes #<I>
py
diff --git a/actstream/models.py b/actstream/models.py index <HASH>..<HASH> 100644 --- a/actstream/models.py +++ b/actstream/models.py @@ -9,9 +9,9 @@ from django.utils.timesince import timesince as djtimesince from django.contrib.contenttypes.models import ContentType try: - from django.core.urlresolvers import...
removed use of depricated @permalink with reverse
py
diff --git a/openfisca_core/json_to_test_case.py b/openfisca_core/json_to_test_case.py index <HASH>..<HASH> 100644 --- a/openfisca_core/json_to_test_case.py +++ b/openfisca_core/json_to_test_case.py @@ -48,6 +48,10 @@ def check_entity_fields(entity_json, entity_class, valid_roles, tax_benefit_syst from .ta...
Set plural roles to [] when empty
py
diff --git a/green/output.py b/green/output.py index <HASH>..<HASH> 100644 --- a/green/output.py +++ b/green/output.py @@ -158,7 +158,7 @@ class GreenStream(object): def __init__(self, stream, html=False): self.stream = stream - if platform.system() == 'Windows': + if platform.system() == ...
I don't have any way to combine coverage from a windows source, and windows is the low man on the totem pole, so we'll just not cover the windows-specific junk.
py
diff --git a/dpark/dependency.py b/dpark/dependency.py index <HASH>..<HASH> 100644 --- a/dpark/dependency.py +++ b/dpark/dependency.py @@ -122,7 +122,8 @@ class HashPartitioner(Partitioner): return self.partitions def getPartition(self, key): - return hash(key) % self.partitions + # hash o...
fix hash collision of tuple
py
diff --git a/scapy.py b/scapy.py index <HASH>..<HASH> 100755 --- a/scapy.py +++ b/scapy.py @@ -4454,7 +4454,7 @@ class TCPOptionsField(StrField): class DNSStrField(StrField): def i2m(self, pkt, x): - x = x.split(".") + x = [k[:63] for k in x.split(".")] # Truncate chunks that cannont be encoded (m...
Fixed DNSStrField.i2m() by truncating chunks of more than <I> bytes because they cannot be encoded (ticket #<I>)
py
diff --git a/embedly/client.py b/embedly/client.py index <HASH>..<HASH> 100644 --- a/embedly/client.py +++ b/embedly/client.py @@ -31,18 +31,20 @@ class Embedly(object): """ Initialize the Embedly client - :param user_agent: User Agent passed to Embedly - :type user_agent: str ...
Tidying - reorder params and add a documentation line for third param.
py
diff --git a/pyvim/layout.py b/pyvim/layout.py index <HASH>..<HASH> 100644 --- a/pyvim/layout.py +++ b/pyvim/layout.py @@ -512,7 +512,7 @@ class ReportingProcessor(Processor): def __init__(self, editor_buffer): self.editor_buffer = editor_buffer - def run(self, cli, document, tokens): + def run(se...
Prompt-toolkit now sends 'buffer' instead of 'document' as the second argument of Processor.run.
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -3,8 +3,6 @@ from setuptools import setup from setuptools import find_packages -import derpibooru - setup( name = "DerPyBooru", description = "Python bindings for Derpibooru's API",
Removing faulty import As pointed out in #<I>, the import in this is breaking pip because it tries to import requests before it's installed. As far as I can see, this import doesn't do anything, and it installed fine without it. So I request that this line gets removed so this package gets installed correctly through ...
py
diff --git a/h2o-perf/bench/py/h2oPerf/H2O.py b/h2o-perf/bench/py/h2oPerf/H2O.py index <HASH>..<HASH> 100644 --- a/h2o-perf/bench/py/h2oPerf/H2O.py +++ b/h2o-perf/bench/py/h2oPerf/H2O.py @@ -417,6 +417,12 @@ class H2OCloudNode: pass except OSError: pass + try: + ...
More logging and tries around H2O shutdown
py
diff --git a/dipper/models/Genotype.py b/dipper/models/Genotype.py index <HASH>..<HASH> 100644 --- a/dipper/models/Genotype.py +++ b/dipper/models/Genotype.py @@ -62,6 +62,8 @@ class Genotype(): 'sequence_variant_affecting_polypeptide_function': 'SO:1000117', 'regulatory_transgene_feature': 'GENO:0000...
add some gene types to genotype.
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100755 --- a/setup.py +++ b/setup.py @@ -23,6 +23,7 @@ setup_www_plugin( 'git+poller = buildbot_travis.vcs.git:GitPoller', 'gerrit = buildbot_travis.vcs.gerrit:Gerrit', 'github = buildbot_travis.vcs.github:GitHub', + ...
Expose existing GitPb class Support using a different change source to get changes and have the Travis plugin consume those and assume git is used.
py
diff --git a/cumulus/settings.py b/cumulus/settings.py index <HASH>..<HASH> 100644 --- a/cumulus/settings.py +++ b/cumulus/settings.py @@ -1,4 +1,4 @@ -from pyrax.cf_wrapper.client import CFClient +from pyrax.object_storage import DEFAULT_CDN_TTL from django.conf import settings @@ -16,7 +16,7 @@ CUMULUS = { ...
use new location of DEFAULT_CDN_TTL
py
diff --git a/tests/test_sanity.py b/tests/test_sanity.py index <HASH>..<HASH> 100644 --- a/tests/test_sanity.py +++ b/tests/test_sanity.py @@ -4,6 +4,7 @@ from pikepdf import _qpdf as qpdf import os import platform import shutil +import gc from contextlib import suppress from shutil import copy @@ -150,6 +151,7 ...
Insist on garbage collection in keep alive test
py
diff --git a/bcbio/pipeline/sample.py b/bcbio/pipeline/sample.py index <HASH>..<HASH> 100644 --- a/bcbio/pipeline/sample.py +++ b/bcbio/pipeline/sample.py @@ -116,6 +116,7 @@ def process_alignment(data, alt_input=None): f1, f2 = postalign.umi_consensus(data) data["umi_bam"] = dd.get_work_bam(d...
UMIs: avoid marking duplicates after consensus
py
diff --git a/dvc/remote/base.py b/dvc/remote/base.py index <HASH>..<HASH> 100644 --- a/dvc/remote/base.py +++ b/dvc/remote/base.py @@ -1,6 +1,7 @@ import os import re import tempfile +import posixpath from dvc.config import Config from dvc.logger import Logger @@ -66,7 +67,7 @@ class RemoteBase(object): ...
cloud: use posixpath to manipulate paths
py
diff --git a/anharmonic/phonon3/conductivity.py b/anharmonic/phonon3/conductivity.py index <HASH>..<HASH> 100644 --- a/anharmonic/phonon3/conductivity.py +++ b/anharmonic/phonon3/conductivity.py @@ -208,7 +208,8 @@ class Conductivity: pp_eigvecs, ...
Fix isotope grid-point specification
py
diff --git a/test/test_utils.py b/test/test_utils.py index <HASH>..<HASH> 100644 --- a/test/test_utils.py +++ b/test/test_utils.py @@ -134,7 +134,7 @@ def test_app(global_conf={}, app_conf={}, test_conf={}): def skipUnlessExecutable(executable): if __which(executable): return lambda func: func - retur...
Syntax failed on Python <I>.
py