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diff --git a/examples/py/cli.py b/examples/py/cli.py index <HASH>..<HASH> 100644 --- a/examples/py/cli.py +++ b/examples/py/cli.py @@ -5,6 +5,7 @@ import os import re import sys import json +import platform from pprint import pprint # ------------------------------------------------------------------------------...
cli.py print out version numbers
py
diff --git a/chess/polyglot.py b/chess/polyglot.py index <HASH>..<HASH> 100644 --- a/chess/polyglot.py +++ b/chess/polyglot.py @@ -112,8 +112,14 @@ class MemoryMappedReader(object): except IndexError: return False - def get_entries_for_position(self, board): - """Seeks a specific posit...
Add minimum weight option for polyglot
py
diff --git a/qiskit/aqua/utils/measurement_error_mitigation.py b/qiskit/aqua/utils/measurement_error_mitigation.py index <HASH>..<HASH> 100644 --- a/qiskit/aqua/utils/measurement_error_mitigation.py +++ b/qiskit/aqua/utils/measurement_error_mitigation.py @@ -116,6 +116,6 @@ def add_measurement_error_mitigation_to_qobj(...
use other info from the qobj of the algorithm
py
diff --git a/switchbot/devices/device.py b/switchbot/devices/device.py index <HASH>..<HASH> 100644 --- a/switchbot/devices/device.py +++ b/switchbot/devices/device.py @@ -238,6 +238,7 @@ class SwitchbotDevice: ex, ) await self._execute_disconnect() + raise ...
Re-raise on Dbus error after handling disconnect (#<I>)
py
diff --git a/salt/modules/network.py b/salt/modules/network.py index <HASH>..<HASH> 100644 --- a/salt/modules/network.py +++ b/salt/modules/network.py @@ -2106,7 +2106,7 @@ def fqdns(): results = pool.map(_lookup_fqdn, addresses) pool.close() pool.join() - except Exception as exc: + exc...
Fix pylint issue
py
diff --git a/retro/data/__init__.py b/retro/data/__init__.py index <HASH>..<HASH> 100644 --- a/retro/data/__init__.py +++ b/retro/data/__init__.py @@ -405,7 +405,7 @@ def merge(*args, quiet=True): for rom in args: try: data, hash = groom_rom(rom) - except IOError: + except (IOEr...
Prevent crash while importing ROMs if the directory contains ><I>MiB files.
py
diff --git a/xdis/magics.py b/xdis/magics.py index <HASH>..<HASH> 100755 --- a/xdis/magics.py +++ b/xdis/magics.py @@ -349,6 +349,8 @@ def sysinfo2float(version_info=sys.version_info): # Python may be too old, e.g. < 2.6 or implementation may # just not have platform pass + ...
Python <I> compatiablity
py
diff --git a/tests/test_orbits.py b/tests/test_orbits.py index <HASH>..<HASH> 100644 --- a/tests/test_orbits.py +++ b/tests/test_orbits.py @@ -1,4 +1,5 @@ ##########################TESTS ON MULTIPLE ORBITS############################# +import sys import numpy import pytest from galpy import potential @@ -617,7 +618...
Chandrasekhar Orbits test does not fail on Windows, mark this in xfail
py
diff --git a/twython/twython.py b/twython/twython.py index <HASH>..<HASH> 100644 --- a/twython/twython.py +++ b/twython/twython.py @@ -168,6 +168,9 @@ class Twython(object): else: # If they don't do authentication, but still want to request unprotected resources, we need an opener. se...
Allow for easier debugging/development, by registering endpoints directly into Twython.
py
diff --git a/tests/test_params.py b/tests/test_params.py index <HASH>..<HASH> 100644 --- a/tests/test_params.py +++ b/tests/test_params.py @@ -80,7 +80,7 @@ class TestParamsIntegration(object): ], ) def test_process_params(kwargs, url_params): - """ Ensure kwargs received build a proper params """ + ""...
tests for both escaped & unescaped single quotes in val
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -10,7 +10,7 @@ from setuptools import setup, find_packages general_requirements = [ 'dpath == 1.4.2', 'pytest >= 4.4.1, < 6.0.0', # For openfisca test - 'numpy >= 1.11, < 1.19', + 'numpy >= 1.11, < 1.18', ...
Downgrade Numpy to <I>
py
diff --git a/python/ray/worker.py b/python/ray/worker.py index <HASH>..<HASH> 100644 --- a/python/ray/worker.py +++ b/python/ray/worker.py @@ -435,10 +435,6 @@ def get_gpu_ids(): """ # TODO(ilr) Handle inserting resources in local mode - if _mode() == LOCAL_MODE: - logger.info("ray.get_gpu_ids() c...
Remove logging (#<I>)
py
diff --git a/marathon_acme/service.py b/marathon_acme/service.py index <HASH>..<HASH> 100644 --- a/marathon_acme/service.py +++ b/marathon_acme/service.py @@ -46,7 +46,6 @@ class MarathonAcme(object): mlb_cert_store, txacme_client_creator, reactor, [responder]) self._server_listening = None - ...
Just record that we're not attached when we start listening
py
diff --git a/host/pybar/scans/scan_fei4_self_trigger.py b/host/pybar/scans/scan_fei4_self_trigger.py index <HASH>..<HASH> 100644 --- a/host/pybar/scans/scan_fei4_self_trigger.py +++ b/host/pybar/scans/scan_fei4_self_trigger.py @@ -73,8 +73,6 @@ class FEI4SelfTriggerScan(Fei4RunBase): except ValueEr...
BUG: not counting trigger in self-trigger mode
py
diff --git a/spyder/plugins/editor/widgets/codeeditor.py b/spyder/plugins/editor/widgets/codeeditor.py index <HASH>..<HASH> 100644 --- a/spyder/plugins/editor/widgets/codeeditor.py +++ b/spyder/plugins/editor/widgets/codeeditor.py @@ -4648,7 +4648,7 @@ class CodeEditor(TextEditBaseWidget): def focusInEvent(self...
Fix call to super for focusInEvent
py
diff --git a/codetransformer/transformers/tests/test_literals.py b/codetransformer/transformers/tests/test_literals.py index <HASH>..<HASH> 100644 --- a/codetransformer/transformers/tests/test_literals.py +++ b/codetransformer/transformers/tests/test_literals.py @@ -18,6 +18,15 @@ from ..literals import ( ) +def t...
TEST: Test that overloaded_X(X) is a noop.
py
diff --git a/cli/sawtooth_cli/main.py b/cli/sawtooth_cli/main.py index <HASH>..<HASH> 100644 --- a/cli/sawtooth_cli/main.py +++ b/cli/sawtooth_cli/main.py @@ -95,11 +95,8 @@ def create_parser(prog_name): add_admin_parser(subparsers, parent_parser) add_config_parser(subparsers, parent_parser) add_block_pa...
Fix leftover comments from rebase sawtooth-core/cli/sawtooth_cli/main.py contained git rebase conflict lines that had been inadvertently left in or not resolved.
py
diff --git a/instabot/bot/bot_get.py b/instabot/bot/bot_get.py index <HASH>..<HASH> 100644 --- a/instabot/bot/bot_get.py +++ b/instabot/bot/bot_get.py @@ -133,8 +133,12 @@ def get_timeline_users(self): if not self.api.get_timeline_feed(): self.logger.warning("Error while getting timeline feed.") ...
Fixed when items not found but have 'feed_items' and 'media_or_ad'
py
diff --git a/contrib/github_buildbot.py b/contrib/github_buildbot.py index <HASH>..<HASH> 100755 --- a/contrib/github_buildbot.py +++ b/contrib/github_buildbot.py @@ -209,7 +209,7 @@ def main(): parser.add_option("-p", "--port", help="Port the HTTP server listens to for the GitHub Service Hook"...
Properly accept --port as integer in github_buildbot cmd line options
py
diff --git a/setup_unix.py b/setup_unix.py index <HASH>..<HASH> 100755 --- a/setup_unix.py +++ b/setup_unix.py @@ -9,18 +9,13 @@ from buildAll_unix import OPENSSL_INSTALL_DIR extra_compile_args = ['-Wall', '-Wno-deprecated-declarations'] -if platform == 'darwin': # Workaround for Clang 3.4 - # add as the elemen...
Properly link OpenSSL and Zlib statically Fixes issue #<I> and issue #<I>
py
diff --git a/tests/seattle_benchmark.py b/tests/seattle_benchmark.py index <HASH>..<HASH> 100644 --- a/tests/seattle_benchmark.py +++ b/tests/seattle_benchmark.py @@ -29,11 +29,20 @@ def run_tests(data): print "Done: " + str(read_delta) + " -- raw JSON in: " + str((ett - tt) * 1000.0) return read_delta -f...
Pointed seattle benchmark to new json file names, consume both json and jsonv and print results for each.
py
diff --git a/haphilipsjs/__init__.py b/haphilipsjs/__init__.py index <HASH>..<HASH> 100644 --- a/haphilipsjs/__init__.py +++ b/haphilipsjs/__init__.py @@ -1,6 +1,7 @@ import requests import logging + LOG = logging.getLogger(__name__) BASE_URL = 'http://{0}:1925/{1}/{2}' TIMEOUT = 5.0 @@ -25,11 +26,13 @@ class Ph...
Reuse a session with a single cached connection
py
diff --git a/tests/parser/features/test_bytes_map_keys.py b/tests/parser/features/test_bytes_map_keys.py index <HASH>..<HASH> 100644 --- a/tests/parser/features/test_bytes_map_keys.py +++ b/tests/parser/features/test_bytes_map_keys.py @@ -61,6 +61,25 @@ def get(k: bytes <= 34) -> num: assert c.get("a" * 34) == 678...
Adds test for keys with a very long byte length.
py
diff --git a/src/infi/docopt_completion/common.py b/src/infi/docopt_completion/common.py index <HASH>..<HASH> 100644 --- a/src/infi/docopt_completion/common.py +++ b/src/infi/docopt_completion/common.py @@ -7,13 +7,16 @@ class DocoptCompletionException(Exception): def get_usage(cmd): cmd_process = subprocess.Po...
Read usage incrementally while running to prevent pipe lock
py
diff --git a/deployment/jailhost.py b/deployment/jailhost.py index <HASH>..<HASH> 100644 --- a/deployment/jailhost.py +++ b/deployment/jailhost.py @@ -76,6 +76,8 @@ def reset_jails(confirm=True, keep_cleanser_master=True): if not value_asbool(keep_cleanser_master): jails.append('cleanser') - for jail...
remove authorized keys for no longer existing key (they are regenerated for each new worker)
py
diff --git a/example_project/settings.py b/example_project/settings.py index <HASH>..<HASH> 100644 --- a/example_project/settings.py +++ b/example_project/settings.py @@ -94,7 +94,10 @@ INSTALLED_APPS = ( ) TEMPLATE_CONTEXT_PROCESSORS = ( + # for django 1.2 or 1.3 'django.core.context_processors.auth', + ...
Add context processor toggle to support django <I> - <I>
py
diff --git a/ergaleia/normalize_path.py b/ergaleia/normalize_path.py index <HASH>..<HASH> 100644 --- a/ergaleia/normalize_path.py +++ b/ergaleia/normalize_path.py @@ -57,7 +57,7 @@ def normalize_path(path, filetype=None, has_filetype=True): if len(parts) > 1: if PY3: s...
fix bug in normalize_path: TypeError: '_NamespacePath' object does not support indexing
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -4,7 +4,7 @@ from setuptools import setup setup( name='rocketchat_API', - version='0.6.5', + version='0.6.6', packages=['rocketchat_API', 'rocketchat_API.APIExceptions'], url='https://github.com/jadolg/...
Add for merge with groups.listAll
py
diff --git a/Brain/emucorebrain/data/carriers/string.py b/Brain/emucorebrain/data/carriers/string.py index <HASH>..<HASH> 100644 --- a/Brain/emucorebrain/data/carriers/string.py +++ b/Brain/emucorebrain/data/carriers/string.py @@ -5,11 +5,11 @@ class StringCarrier(Carrier): CARRIER_TYPE = 2 - def __init__(s...
Code Cleanup in string.py
py
diff --git a/ospd/ospd.py b/ospd/ospd.py index <HASH>..<HASH> 100644 --- a/ospd/ospd.py +++ b/ospd/ospd.py @@ -21,12 +21,6 @@ """ OSP Daemon core class. """ - -# This is needed for older pythons as our current module is called the same -# as the package we are in ... -# Another solution would be to rename that file...
Drop obsoelete import from __future__ We are already in the future and using python 3 only.
py
diff --git a/salt/pillar.py b/salt/pillar.py index <HASH>..<HASH> 100644 --- a/salt/pillar.py +++ b/salt/pillar.py @@ -16,12 +16,13 @@ class Pillar(object): ''' Read over the pillar top files and render the pillar data ''' - def __init__(self, opts, grains): + def __init__(self, opts, grains, id_):...
Add id to pillar object
py
diff --git a/bcbio/provenance/programs.py b/bcbio/provenance/programs.py index <HASH>..<HASH> 100644 --- a/bcbio/provenance/programs.py +++ b/bcbio/provenance/programs.py @@ -9,6 +9,7 @@ import subprocess from bcbio import utils from bcbio.pipeline import config_utils, version +from bcbio.log import logger impor...
Better info for when jar_versioner can't determine version
py
diff --git a/tests/test_discourse.py b/tests/test_discourse.py index <HASH>..<HASH> 100644 --- a/tests/test_discourse.py +++ b/tests/test_discourse.py @@ -23,7 +23,6 @@ # import datetime -import json import shutil import sys import tempfile
[tests] Fix importing PEP8 code style errors This patch fixes the next importing errors lighted by flake8 tool: * F<I> '<module>' imported but unused
py
diff --git a/broadlink/__init__.py b/broadlink/__init__.py index <HASH>..<HASH> 100644 --- a/broadlink/__init__.py +++ b/broadlink/__init__.py @@ -74,6 +74,7 @@ def get_devices() -> Dict[int, Tuple[Type[device], str, str]]: 0x62bc: (rm4, "RM4 mini", "Broadlink"), 0x62be: (rm4, "RM4C mini", "Broadlink"...
Add support for Broadlink RM4 pro (0x<I>b) (#<I>)
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -23,6 +23,7 @@ VERSION = versioneer.get_version() NAME = 'ugali' HERE = os.path.abspath(os.path.dirname(__file__)) URL = 'https://github.com/DarkEnergySurvey/ugali' +URL = 'https://github.com/kadrlica/ugali' DESC = "Ultra-...
Changing to tiny isochrones
py
diff --git a/cmd2/cmd2.py b/cmd2/cmd2.py index <HASH>..<HASH> 100644 --- a/cmd2/cmd2.py +++ b/cmd2/cmd2.py @@ -3503,11 +3503,13 @@ class Cmd(cmd.Cmd): if rl_type != RlType.NONE: last = None for item in history: - # readline only adds a single entry for multiple sequenti...
Adding individual lines of commands to readline history to match how it was entered
py
diff --git a/cherrypy/lib/jsontools.py b/cherrypy/lib/jsontools.py index <HASH>..<HASH> 100644 --- a/cherrypy/lib/jsontools.py +++ b/cherrypy/lib/jsontools.py @@ -1,9 +1,10 @@ +import sys import cherrypy -try: +if sys.version_info >= (2, 6): # Python 2.6: simplejson is part of the standard library import j...
#<I>, fixed `json` import login in jsontools to make sure it's only loaded in python >= <I> (the python-json package used by sugar installs a json package in <I> but it's a complete different thing, making everything fail)
py
diff --git a/tests/axes_test.py b/tests/axes_test.py index <HASH>..<HASH> 100644 --- a/tests/axes_test.py +++ b/tests/axes_test.py @@ -23,8 +23,8 @@ from glyphsLib.classes import GSFont def test_custom_parameter_vfo_current(): - """Tests get_regular_master when 'Variable Font Origin' custom parameter name - ...
remove trailing whitespace to address linter fails on new tests
py
diff --git a/hdl_toolkit/hdlObjects/value.py b/hdl_toolkit/hdlObjects/value.py index <HASH>..<HASH> 100644 --- a/hdl_toolkit/hdlObjects/value.py +++ b/hdl_toolkit/hdlObjects/value.py @@ -85,7 +85,11 @@ class Value(): def __xor__(self, other): raise NotImplementedError() def __eq__(self, other): - ...
__eq__ is _eq for Values else __eq__
py
diff --git a/goscale/plugins/calendar/cms_plugins.py b/goscale/plugins/calendar/cms_plugins.py index <HASH>..<HASH> 100644 --- a/goscale/plugins/calendar/cms_plugins.py +++ b/goscale/plugins/calendar/cms_plugins.py @@ -20,7 +20,7 @@ class CalendarPlugin(GoscaleCMSPluginBase): plugin_post_template = 'event.html' ...
goscale/plugins/calendar/cms_plugins.py
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -24,6 +24,7 @@ setup( url="https://github.com/keleshev/schema", py_modules=["schema"], long_description=codecs.open("README.rst", "r", "utf-8").read(), + long_description_content_type='text/x-rst', insta...
Set long_description_content_type (#<I>) This is so things like [pypi.org](<URL>) don't have to guess how to render the package description.
py
diff --git a/tests/test_regressions.py b/tests/test_regressions.py index <HASH>..<HASH> 100644 --- a/tests/test_regressions.py +++ b/tests/test_regressions.py @@ -134,3 +134,20 @@ def main(): import time """ assert isort.code(isort.code(isort.code(test_input))) == expected_output + + +def test_no_extra_blank...
Add test for issue #<I>
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100755 --- a/setup.py +++ b/setup.py @@ -16,7 +16,7 @@ setup( description='Property types: LazyProperty, TypedProperty, SetOnceProperty', url='https://github.org/nejucomo/{}'.format(pkg), license='MIT (see LICENSE.txt)', - version='0.2.dev0', + ...
Bump the version from ``<I>.dev0`` → ``<I>``.
py
diff --git a/cli_helpers/tabular_output/terminaltables_adapter.py b/cli_helpers/tabular_output/terminaltables_adapter.py index <HASH>..<HASH> 100644 --- a/cli_helpers/tabular_output/terminaltables_adapter.py +++ b/cli_helpers/tabular_output/terminaltables_adapter.py @@ -21,10 +21,7 @@ def adapter(data, headers, table_f...
Remove try/except that should never be hit. Increases code coverage.
py
diff --git a/lib/python/voltcli/hostinfo.py b/lib/python/voltcli/hostinfo.py index <HASH>..<HASH> 100644 --- a/lib/python/voltcli/hostinfo.py +++ b/lib/python/voltcli/hostinfo.py @@ -63,7 +63,7 @@ class Hosts(object): connection_host = None target_host = None for host in self.hosts_by_id.valu...
ENG-<I>, allow user to stop node by IP address. (#<I>) If machine has multiple network interfaces, remember to add --externalinterface option in command line arguments to let voltdb know which one you are using. Otherwise voltdb would pick whatever comes first. Change-Id: Icb<I>bc<I>fd2ed0c<I>e<I>e<I>a6f3b<I>b3a9f...
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -1,11 +1,11 @@ from setuptools import setup setup(name='ocdsmerge', - version='0.1', + version='0.2', description='OCDS Release Merge Library', author='David Raznick', author_email='mr.raznick@...
move repo over to opencontracting
py
diff --git a/doc/source/conf.py b/doc/source/conf.py index <HASH>..<HASH> 100644 --- a/doc/source/conf.py +++ b/doc/source/conf.py @@ -78,7 +78,7 @@ release = version.replace('.dev', '') exclude_trees = [] # The reST default role (used for this markup: `text`) to use for all documents. -default_role = py:obj +defau...
Fixed typo in doc conf. Test auto RTD build on commit.
py
diff --git a/tensorlayer/layers/embedding.py b/tensorlayer/layers/embedding.py index <HASH>..<HASH> 100644 --- a/tensorlayer/layers/embedding.py +++ b/tensorlayer/layers/embedding.py @@ -284,10 +284,8 @@ class Word2vecEmbedding(Layer): The nce_cost is returned only if the nce_loss is used. """ -...
refactoring: Deduplication
py
diff --git a/rflint/common.py b/rflint/common.py index <HASH>..<HASH> 100644 --- a/rflint/common.py +++ b/rflint/common.py @@ -6,7 +6,6 @@ WARNING="W" class Rule(object): # default severity; subclasses may override severity = WARNING - rule_type = "general" output_format = "{severity}: {linenumber},...
removed unused "ruletype" parameter; added some docs
py
diff --git a/molo/core/api/tests/test_importers.py b/molo/core/api/tests/test_importers.py index <HASH>..<HASH> 100644 --- a/molo/core/api/tests/test_importers.py +++ b/molo/core/api/tests/test_importers.py @@ -234,10 +234,12 @@ class TestSiteSectionImporter(MoloTestCaseMixin, TestCase): # TODO # self...
Add additional refactor test for related sections
py
diff --git a/Bigcommerce/api/__init__.py b/Bigcommerce/api/__init__.py index <HASH>..<HASH> 100644 --- a/Bigcommerce/api/__init__.py +++ b/Bigcommerce/api/__init__.py @@ -6,7 +6,7 @@ import logging from Bigcommerce.api.lib.connection import Connection from resources import ResourceAccessor -log = logging.getLogg...
Changed the logger name to Bigcommerce.api
py
diff --git a/notrequests.py b/notrequests.py index <HASH>..<HASH> 100644 --- a/notrequests.py +++ b/notrequests.py @@ -1,5 +1,4 @@ import base64 -import cookielib import functools import json as simplejson import mimetools @@ -7,9 +6,19 @@ import mimetypes import os import re import ssl +import sys import urlli...
First go at writing conditional module imports. Eventually we will import the right things for each version of Python. Not complete.
py
diff --git a/pyontutils/parcellation.py b/pyontutils/parcellation.py index <HASH>..<HASH> 100755 --- a/pyontutils/parcellation.py +++ b/pyontutils/parcellation.py @@ -1170,7 +1170,7 @@ class Artifacts(Ont): PaxRat4 = PaxRatAt(iri=ilxtr.paxr4, label='The Rat Brain in Stereotaxic Coordinate...
parc pax4 fixed typo in synonyms
py
diff --git a/pyte/streams.py b/pyte/streams.py index <HASH>..<HASH> 100644 --- a/pyte/streams.py +++ b/pyte/streams.py @@ -137,21 +137,6 @@ class Stream(object): self.parser = self._parser_fsm() self.parser.send(None) - def consume(self, char): - """Consumes a single string character and a...
Removed deprecated Stream.consume
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -488,7 +488,7 @@ REQUIRES = [ 'greenlet>=0.4.1', 'itsdangerous>=0.21', 'python-dateutil>=2.1', - 'pytz==2013b', + 'pytz>=2013b', 'requests>=1.2.3', 'six>=1.5.2', ...
authorize more recent pytz than <I>b
py
diff --git a/src/miqclient/api.py b/src/miqclient/api.py index <HASH>..<HASH> 100644 --- a/src/miqclient/api.py +++ b/src/miqclient/api.py @@ -47,7 +47,7 @@ class API(object): self._versions = {} for version in data.pop("versions", []): self._versions[version["name"]] = version["href"] - ...
bug: Switch from iteritems to items Python 2 and 3 both support dict.items. By using items instead of iteritems the code will once more work on legacy and current Python implementations. Closes #<I>.
py
diff --git a/cumulusci/tasks/github/release.py b/cumulusci/tasks/github/release.py index <HASH>..<HASH> 100644 --- a/cumulusci/tasks/github/release.py +++ b/cumulusci/tasks/github/release.py @@ -18,7 +18,7 @@ class CreateRelease(BaseGithubTask): }, "version_id": { "description": "The Subs...
don't require version_id on CreateRelease
py
diff --git a/pygsp/operators.py b/pygsp/operators.py index <HASH>..<HASH> 100644 --- a/pygsp/operators.py +++ b/pygsp/operators.py @@ -41,17 +41,25 @@ def compute_fourier_basis(G, exact=None, cheb_order=30, **kwargs): else: if not hasattr(G, L): raise AttributeError("Graph Laplacian is missin...
compute fourier basis and full eigen
py
diff --git a/dipper/sources/ZFIN.py b/dipper/sources/ZFIN.py index <HASH>..<HASH> 100644 --- a/dipper/sources/ZFIN.py +++ b/dipper/sources/ZFIN.py @@ -557,7 +557,7 @@ class ZFIN(Source): #Is the reverse complement of the morpholino sequence the target sequence or, like miRNAs, is there ...
ZFIN.py: Commit branch test.
py
diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -66,7 +66,7 @@ class FFBuildExt(build_ext): args = ["-O3", '-fno-strict-aliasing', '-Wno-error'] for ext in self.extensions: ext.extra_compile_args = args - super(FFBuildExt, self).bui...
build_ext is not object derived.
py
diff --git a/deis/settings.py b/deis/settings.py index <HASH>..<HASH> 100644 --- a/deis/settings.py +++ b/deis/settings.py @@ -4,6 +4,8 @@ Django settings for the Deis project. from __future__ import unicode_literals import os.path +import random +import string import sys import tempfile @@ -303,6 +305,9 @@ DAT...
fix(controller): allow multiple unit tests with random db name
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diff --git a/tk_tools/groups.py b/tk_tools/groups.py index <HASH>..<HASH> 100644 --- a/tk_tools/groups.py +++ b/tk_tools/groups.py @@ -6,7 +6,11 @@ import calendar from collections import OrderedDict import xlrd -from tk_tools.images import minus + +try: + from tk_tools.images import minus +except ImportError: +...
Adding try/except block so that autodoc works correctly
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diff --git a/switchboard/conditions.py b/switchboard/conditions.py index <HASH>..<HASH> 100644 --- a/switchboard/conditions.py +++ b/switchboard/conditions.py @@ -12,7 +12,6 @@ switchboard.conditions import datetime import itertools -from webob import Request from formencode import Invalid from .models import E...
Use a more generic check for request objects.
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diff --git a/genepattern/sessions.py b/genepattern/sessions.py index <HASH>..<HASH> 100644 --- a/genepattern/sessions.py +++ b/genepattern/sessions.py @@ -100,6 +100,12 @@ session = SessionList() def get_session(index): - """genepattern.get_session shim added for the purposes of backward compatibility""" + "...
Added register_session shim
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diff --git a/UWG/UWG.py b/UWG/UWG.py index <HASH>..<HASH> 100644 --- a/UWG/UWG.py +++ b/UWG/UWG.py @@ -7,7 +7,7 @@ Version 4.2 Original Author: B. Bueno Edited by A. Nakano & Lingfu Zhang Modified by Joseph Yang (joeyang@mit.edu) - May, 2016 -Translated to Python by Chris Mackey (chris@mackeyarchitecture.com) - May,...
Making Sure We Credit the Right Person :)
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diff --git a/salt/modules/file.py b/salt/modules/file.py index <HASH>..<HASH> 100644 --- a/salt/modules/file.py +++ b/salt/modules/file.py @@ -1651,8 +1651,13 @@ def replace(path, with salt.utils.fopen(path, mode='r', buffering=bufsize) as r_file: +...
Fixing issue where count was being ignored by file.replace Fixes #<I>
py
diff --git a/d1_libclient_python/src/d1_client/mnclient.py b/d1_libclient_python/src/d1_client/mnclient.py index <HASH>..<HASH> 100644 --- a/d1_libclient_python/src/d1_client/mnclient.py +++ b/d1_libclient_python/src/d1_client/mnclient.py @@ -193,15 +193,14 @@ class MemberNodeClient(d1baseclient.DataONEBaseClient): ...
Put the newPid in the Param part (fields) instead of the header.
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diff --git a/telethon/client/auth.py b/telethon/client/auth.py index <HASH>..<HASH> 100644 --- a/telethon/client/auth.py +++ b/telethon/client/auth.py @@ -427,6 +427,23 @@ class AuthMethods: if me: return me + # To prevent abuse, one has to try to sign in before signing up. This + ...
Call sign_in during sign_up if needed to send the code
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diff --git a/server/workbench.py b/server/workbench.py index <HASH>..<HASH> 100644 --- a/server/workbench.py +++ b/server/workbench.py @@ -60,9 +60,9 @@ class WorkBench(): sample = self.data_store.get_sample(md5_or_filename) return {'sample': sample} if sample else None - def has_sample(self, md5...
removing filename option for have_sample; also changing has_sample to have_sample Former-commit-id: bcd2af0d<I>bc<I>c<I>ed4f9da1e<I>c<I>
py
diff --git a/tests/integration/cloud/helpers/virtualbox.py b/tests/integration/cloud/helpers/virtualbox.py index <HASH>..<HASH> 100644 --- a/tests/integration/cloud/helpers/virtualbox.py +++ b/tests/integration/cloud/helpers/virtualbox.py @@ -113,7 +113,8 @@ class VirtualboxCloudTestCase(integration.ShellCase): ...
Force actions in tests Otherwise there is always a confirmation prompt... ain't nobody got time fo' dat! Related to saltstack/salt#<I> Saltcloud virtualbox provider
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diff --git a/kconfiglib.py b/kconfiglib.py index <HASH>..<HASH> 100644 --- a/kconfiglib.py +++ b/kconfiglib.py @@ -1867,6 +1867,11 @@ def _str_val(obj): symbol), it must be a Symbol.""" return obj if isinstance(obj, str) else obj.get_value() +def _sym_str_string(sym_or_str): + if isinstance(sym_or_str, s...
Move _sym_str_string() to a more logical location.
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diff --git a/bokeh/glyphs.py b/bokeh/glyphs.py index <HASH>..<HASH> 100644 --- a/bokeh/glyphs.py +++ b/bokeh/glyphs.py @@ -124,7 +124,7 @@ class Glyph(HasProps): # Use the all_attributes variable to generate the list... # TODO: should we use setters to detect when something has been overriden ...
adding explicit Color attribute to the Rects glyph, so the example will work; need to figure out why this is not being picked up from the Glyph base class
py
diff --git a/ReText/__init__.py b/ReText/__init__.py index <HASH>..<HASH> 100644 --- a/ReText/__init__.py +++ b/ReText/__init__.py @@ -12,6 +12,11 @@ app_version = "4.0 (Git)" settings = QSettings('ReText project', 'ReText') +if not str(settings.fileName()).endswith('.conf'): + # We are on Windows probably + setti...
Use IniFormat of QSettings on Windows. Ticket <I>.
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diff --git a/src/_thread/__init__.py b/src/_thread/__init__.py index <HASH>..<HASH> 100644 --- a/src/_thread/__init__.py +++ b/src/_thread/__init__.py @@ -3,10 +3,7 @@ import sys __future_module__ = True if sys.version_info[0] < 3: - try: - from thread import * - except ImportError: - from dummy...
Remove import of dummy_thread from _thread module (issue #<I>)
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diff --git a/GPyOpt/core/evaluators/batch_local_penalization.py b/GPyOpt/core/evaluators/batch_local_penalization.py index <HASH>..<HASH> 100644 --- a/GPyOpt/core/evaluators/batch_local_penalization.py +++ b/GPyOpt/core/evaluators/batch_local_penalization.py @@ -56,6 +56,8 @@ def estimate_L(model,bounds,storehistory=Tr...
Fix the bug with respect to scipy <I> (#<I>) The LP optimization fails when scipy upgrades to <I>
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diff --git a/test/test_ssl.py b/test/test_ssl.py index <HASH>..<HASH> 100644 --- a/test/test_ssl.py +++ b/test/test_ssl.py @@ -454,14 +454,14 @@ class TestSSL(unittest.TestCase): raise SkipTest("No hosts entry for 'server'. Cannot validate " "hostname in the certificate") + ...
PYTHON-<I> - Can't test loading system CA certs on Windows.
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diff --git a/lib/git/cmd.py b/lib/git/cmd.py index <HASH>..<HASH> 100644 --- a/lib/git/cmd.py +++ b/lib/git/cmd.py @@ -215,6 +215,7 @@ class Git(object): stdin=istream, stderr=subprocess.PIPE, stdout=subprocess.PIPE, + ...
cmd: By default, on linux, the parent file handles will be closed to leave the child less cluttered, and make it easier to debug as it will only have the file descriptors we set. It appears to be more stable regarding the stdin-is-closed-but-child-doesn't-realize-this issue
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diff --git a/GSSHAPY/setup.py b/GSSHAPY/setup.py index <HASH>..<HASH> 100644 --- a/GSSHAPY/setup.py +++ b/GSSHAPY/setup.py @@ -3,7 +3,7 @@ import os from setuptools import setup, find_packages requires = [ - 'sqlalchemy>=0.7' + 'sqlalchemy>=0.8' ] setup(name='gsshapy',
Started version <I> branch.
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diff --git a/dedupe/core.py b/dedupe/core.py index <HASH>..<HASH> 100644 --- a/dedupe/core.py +++ b/dedupe/core.py @@ -181,7 +181,8 @@ def blockedPairs(blocks) : block_pairs = itertools.combinations(block, 2) for pair in block_pairs : - yield pair + if (pair[0]['dataset'] != pa...
Generate Blocked Pairs correctly so that both the records are from differet datasets
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diff --git a/programs/thellier_gui.py b/programs/thellier_gui.py index <HASH>..<HASH> 100755 --- a/programs/thellier_gui.py +++ b/programs/thellier_gui.py @@ -3616,14 +3616,15 @@ You can combine multiple measurement files into one measurement file using Pmag #================================================== ...
fix minor bugs preventing users from seeing anisotropy log
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diff --git a/jarn/mkrelease/mkrelease.py b/jarn/mkrelease/mkrelease.py index <HASH>..<HASH> 100644 --- a/jarn/mkrelease/mkrelease.py +++ b/jarn/mkrelease/mkrelease.py @@ -101,6 +101,7 @@ class Defaults(object): def __init__(self, server): self.sign = parser.getboolean(server, 'sign', None)...
Allow to set register=no in ~/.pypirc.
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diff --git a/setup.py b/setup.py index <HASH>..<HASH> 100644 --- a/setup.py +++ b/setup.py @@ -3,11 +3,15 @@ from setuptools import setup, find_packages setup( name = 'django-subdomains', - version = '1.1.1', + version = '1.1.2', url = 'http://github.com/tkaemming/django-subdomains/', + author = '...
setup.py changes for pypi
py
diff --git a/tests/nipaptest.py b/tests/nipaptest.py index <HASH>..<HASH> 100755 --- a/tests/nipaptest.py +++ b/tests/nipaptest.py @@ -1540,6 +1540,40 @@ class TestAddressListing(unittest.TestCase): + def test_invalid_search_string(self): + """ Test error handling of prefix smart search + """ + +...
backend: Test case for unclosed search strings Added test cases for error handling in the smart_search functions when provided a search string with unclosed quotes.
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diff --git a/holoviews/plotting/raster.py b/holoviews/plotting/raster.py index <HASH>..<HASH> 100644 --- a/holoviews/plotting/raster.py +++ b/holoviews/plotting/raster.py @@ -24,6 +24,12 @@ class RasterPlot(ElementPlot): style_opts = ['alpha', 'cmap', 'interpolation', 'visible', 'filterrad', 'or...
Enabled inversion of yaxis for Raster
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diff --git a/src/psd_tools2/psd/base.py b/src/psd_tools2/psd/base.py index <HASH>..<HASH> 100644 --- a/src/psd_tools2/psd/base.py +++ b/src/psd_tools2/psd/base.py @@ -66,6 +66,34 @@ class BaseElement(object): p.pretty(value) p.breakable('') + def _find(self, condition=None): + ...
Add _find for debugging
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diff --git a/mixbox/fields.py b/mixbox/fields.py index <HASH>..<HASH> 100644 --- a/mixbox/fields.py +++ b/mixbox/fields.py @@ -101,7 +101,7 @@ class TypedField(object): belongs to.. owner: The TypedField owner class. """ - if not instance: + if instance is None: ...
Fixed recursion errors with TypedFields and MutableSequence objects.
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diff --git a/federation/outbound.py b/federation/outbound.py index <HASH>..<HASH> 100644 --- a/federation/outbound.py +++ b/federation/outbound.py @@ -141,15 +141,15 @@ def handle_send( try: payload = handle_create_payload(entity, author_user, protocol, parent_user=parent_user) ...
Make AP 'to' always a list
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diff --git a/cassandra/cluster.py b/cassandra/cluster.py index <HASH>..<HASH> 100644 --- a/cassandra/cluster.py +++ b/cassandra/cluster.py @@ -2875,7 +2875,10 @@ class ResponseFuture(object): "Got unexpected response when preparing statement " "on host %s: %s" % (self._current_...
Convert errors on re-prepare to API exceptions
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diff --git a/buildbot/status/builder.py b/buildbot/status/builder.py index <HASH>..<HASH> 100644 --- a/buildbot/status/builder.py +++ b/buildbot/status/builder.py @@ -12,11 +12,7 @@ import os, shutil, sys, re, urllib, itertools import gc from cPickle import load, dump from cStringIO import StringIO - -try: # bz2 is ...
Remove bz2.BZ2File workaround for versions less than python-<I>
py
diff --git a/tests/test_pykakasi.py b/tests/test_pykakasi.py index <HASH>..<HASH> 100644 --- a/tests/test_pykakasi.py +++ b/tests/test_pykakasi.py @@ -14,6 +14,9 @@ def test_kakasi_hepburn(): (u"にゃ", "nya"), (u"っき", "kki"), (u"っふぁ", "ffa"), + (u"キャ", "kya"), + (u"キュ", "kyu"), + ...
Add test for kya, kyu and kyo
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diff --git a/src/import_exchange_rates.py b/src/import_exchange_rates.py index <HASH>..<HASH> 100644 --- a/src/import_exchange_rates.py +++ b/src/import_exchange_rates.py @@ -81,11 +81,13 @@ def __save_rates(config, latest_rates): currency = book.currencies.get(mnemonic=rate) amount = rates[ra...
note about the potential destination for the exchange rate price
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diff --git a/multiqc/modules/pangolin/pangolin.py b/multiqc/modules/pangolin/pangolin.py index <HASH>..<HASH> 100644 --- a/multiqc/modules/pangolin/pangolin.py +++ b/multiqc/modules/pangolin/pangolin.py @@ -41,7 +41,7 @@ class MultiqcModule(BaseMultiqcModule): if len(self.pangolin_data) == 0: rais...
Forgot to turn auto-format on save back on again
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diff --git a/satpy/modifiers/_crefl.py b/satpy/modifiers/_crefl.py index <HASH>..<HASH> 100644 --- a/satpy/modifiers/_crefl.py +++ b/satpy/modifiers/_crefl.py @@ -118,7 +118,7 @@ class ReflectanceCorrector(ModifierBase, DataDownloadMixin): @staticmethod def _read_var_from_hdf4_file(local_filename, var_name): ...
Fix typo in crefl DEM reading
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diff --git a/odl/contrib/datasets/images/cambridge.py b/odl/contrib/datasets/images/cambridge.py index <HASH>..<HASH> 100644 --- a/odl/contrib/datasets/images/cambridge.py +++ b/odl/contrib/datasets/images/cambridge.py @@ -26,7 +26,7 @@ __all__ = ('brain_phantom', 'resolution_phantom', 'building', 'rings', DATA_SU...
fix broken url (#<I>)
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diff --git a/rshell/main.py b/rshell/main.py index <HASH>..<HASH> 100755 --- a/rshell/main.py +++ b/rshell/main.py @@ -2652,7 +2652,7 @@ def main(): import termios stdin_fd = sys.stdin.fileno() save_settings = termios.tcgetattr(stdin_fd) - except ImportError: + except: pass ...
Allow tcgetattr call to fail as well. This can happen if rshell's stdin is redirected from /dev/null which is fine if rshell is being used in a non-interactive manner.
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diff --git a/salt/modules/glance.py b/salt/modules/glance.py index <HASH>..<HASH> 100644 --- a/salt/modules/glance.py +++ b/salt/modules/glance.py @@ -323,13 +323,10 @@ def image_delete(id=None, name=None, profile=None): # pylint: disable=C0103 'result': False, 'comment': str(forbidden) ...
minor improvement on the returned comment of image_delete()
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diff --git a/test/test_storage.py b/test/test_storage.py index <HASH>..<HASH> 100644 --- a/test/test_storage.py +++ b/test/test_storage.py @@ -6,8 +6,10 @@ import re import time from cloudvolume.storage import Storage +from cloudvolume import exceptions from layer_harness import delete_layer, TEST_NUMBER + #TOD...
fixtest: catch UnsupportedCompressionType instead of TypeError
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diff --git a/flask_jwt_extended/utils.py b/flask_jwt_extended/utils.py index <HASH>..<HASH> 100644 --- a/flask_jwt_extended/utils.py +++ b/flask_jwt_extended/utils.py @@ -369,7 +369,7 @@ def unset_jwt_cookies(response, domain=None): def unset_access_cookies(response, domain=None): """ - Modifiy a Flask Respo...
Fix reversed docstrings for unset cookie funcs (#<I>)
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diff --git a/saltcloud/clouds/openstack.py b/saltcloud/clouds/openstack.py index <HASH>..<HASH> 100644 --- a/saltcloud/clouds/openstack.py +++ b/saltcloud/clouds/openstack.py @@ -410,11 +410,15 @@ def create(vm_): not_ready = False break + if running and private: + ...
fixing logic to wait for private IPs
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diff --git a/tests/test_create.py b/tests/test_create.py index <HASH>..<HASH> 100644 --- a/tests/test_create.py +++ b/tests/test_create.py @@ -1,6 +1,10 @@ import activegit import pytest -def test_creation(): +def test_nocreation(): with pytest.raises(TypeError): activegit.ActiveGit() + +def test_crea...
adding test for successful initial ag repo
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