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https://api.github.com/repos/huggingface/datasets/issues/3784 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3784/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3784/comments | https://api.github.com/repos/huggingface/datasets/issues/3784/events | https://github.com/huggingface/datasets/issues/3784 | 1,150,057,955 | I_kwDODunzps5EjH3j | 3,784 | Unable to Download CNN-Dailymail Dataset | {
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"#self-assign",
"@AngadSethi thanks for reporting and thanks for your PR!",
"Glad to help @albertvillanova! Just fine-tuning the PR, will comment once I am able to get it up and running 😀",
"Fixed by:\r\n- #3787"
] | 1,645,766,687,000 | 1,646,316,317,000 | 1,646,316,317,000 | NONE | null | null | null | ## Describe the bug
I am unable to download the CNN-Dailymail dataset. Upon closer investigation, I realised why this was happening:
- The dataset sits in Google Drive, and both the CNN and DM datasets are large.
- Google is unable to scan the folder for viruses, **so the link which would originally download the dataset, now downloads the source code of this web page:**
- **This leads to the following error**:
```python
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories'
```
## Steps to reproduce the bug
```python
import datasets
dataset = datasets.load_dataset("cnn_dailymail", "3.0.0", split="train")
```
## Expected results
That the dataset is downloaded and processed just like other datasets.
## Actual results
Hit with this error:
```python
NotADirectoryError: [Errno 20] Not a directory: '/root/.cache/huggingface/datasets/downloads/1bc05d24fa6dda2468e83a73cf6dc207226e01e3c48a507ea716dc0421da583b/cnn/stories'
```
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.18.3
- Platform: Linux-5.4.144+-x86_64-with-Ubuntu-18.04-bionic
- Python version: 3.7.12
- PyArrow version: 6.0.1
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https://api.github.com/repos/huggingface/datasets/issues/3783 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3783/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3783/comments | https://api.github.com/repos/huggingface/datasets/issues/3783/events | https://github.com/huggingface/datasets/pull/3783 | 1,149,256,744 | PR_kwDODunzps4zZ1jR | 3,783 | Support passing str to iter_files | {
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"@mariosasko it was indeed while reading that PR, that I remembered this change I wanted to do long ago... 😉"
] | 1,645,707,495,000 | 1,645,718,500,000 | 1,645,718,500,000 | MEMBER | null | false | {
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https://api.github.com/repos/huggingface/datasets/issues/3782 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3782/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3782/comments | https://api.github.com/repos/huggingface/datasets/issues/3782/events | https://github.com/huggingface/datasets/pull/3782 | 1,148,994,022 | PR_kwDODunzps4zY-Xb | 3,782 | Error of writing with different schema, due to nonpreservation of nullability | {
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"Hi ! Thanks for reporting, indeed `disable_nullable` doesn't seem to be supported in this case. Maybe at one point we can have `disable_nullable` as a parameter of certain feature types"
] | 1,645,690,987,000 | 1,646,319,279,000 | 1,646,319,279,000 | CONTRIBUTOR | null | false | {
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} | ## 1. Case
```
dataset.map(
batched=True,
disable_nullable=True,
)
```
will get the following error at here https://github.com/huggingface/datasets/blob/c9967f55626931f8059dc416526c791444cdfdf7/src/datasets/arrow_writer.py#L516
`pyarrow.lib.ArrowInvalid: Tried to write record batch with different schema`
## 2. Debugging
### 2.1 tracing
During `_map_single`, the following are called
https://github.com/huggingface/datasets/blob/c9967f55626931f8059dc416526c791444cdfdf7/src/datasets/arrow_dataset.py#L2523
https://github.com/huggingface/datasets/blob/c9967f55626931f8059dc416526c791444cdfdf7/src/datasets/arrow_writer.py#L511
### 2.2. Observation
The problem is, even after `table_cast`, `pa_table.schema != self._schema`
`pa_table.schema` (before/after `table_cast`)
```
input_ids: list<item: int32>
child 0, item: int32
```
`self._schema`
```
input_ids: list<item: int32> not null
child 0, item: int32
```
### 2.3. Reason
https://github.com/huggingface/datasets/blob/c9967f55626931f8059dc416526c791444cdfdf7/src/datasets/table.py#L1121
Here we lose nullability stored in `schema` because it seems that `Features` is always nullable and don't store nullability.
https://github.com/huggingface/datasets/blob/c9967f55626931f8059dc416526c791444cdfdf7/src/datasets/table.py#L1103
So, casting to schema from such `Features` loses nullability, and eventually causes error of writing with different schema
## 3. Solution
1. Let `Features` stores nullability.
2. Directly cast table with original schema but not schema from converted `Features`. (this PR)
3. Don't `cast_table` when `write_table` | {
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"Hello! I added the tags and created a PR. Just to note, regarding the paperswithcode_id tag, that currently has the value \"reddit\"; the dataset described as reddit in paperswithcode is https://paperswithcode.com/dataset/reddit and it isn't the Webis-tldr-17. I could not find Webis-tldr-17 in paperswithcode neith... | 1,645,651,756,000 | 1,646,071,240,000 | 1,646,047,274,000 | CONTRIBUTOR | null | false | {
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} | The changes proposed are based on the "TL;DR: Mining Reddit to Learn Automatic Summarization" paper & https://zenodo.org/record/1043504#.YhaKHpbQC38
It is a Reddit dataset indeed, but the name given to the dataset by the authors is Webis-TLDR-17 (corpus), so perhaps it should be modified as well.
The task at which the dataset is aimed is abstractive summarization.
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"I also filled some missing sections in the dataset card"
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"Hi @Darshan2104, thanks for reporting.\r\n\r\nPlease note that at Hugging Face we do not host the data of this dataset, but just a loading script pointing to the host of the data owners.\r\n\r\nApparently the data owners changed their data host server. After googling it, I found their new website at: https://lil.n... | 1,645,611,350,000 | 1,645,635,904,000 | 1,645,622,800,000 | NONE | null | null | null | Hello,
I tried to download the **newsroom** dataset but it didn't work out for me. it said me to **download it manually**!
For manually, Link is also didn't work! It is sawing some ad or something!
If anybody has solved this issue please help me out or if somebody has this dataset please share your google drive link, it would be a great help!
Thanks
Darshan Tank | {
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"I'm not sure if the documentation explains why the dataset identifiers might have a namespace or not (the user/org): 'glue' vs 'severo/glue'. Do you think we should explain it, and relate it to the GitHub/Hub distinction?",
"> I'm not sure if the documentation explains why the dataset identifiers might have a na... | 1,645,554,210,000 | 1,645,715,077,000 | 1,645,715,076,000 | MEMBER | null | false | {
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Indeed this makes the documentation confusing and we don't want this distinction anymore in the future. Ideally users should share their datasets on the Hub directly.
### Changes
- the documentation about dataset loading mentions the datasets on the Hub (no difference between canonical and community, since they all have their own repository now)
- the documentation about adding a dataset doesn't explain the technical differences between canonical and community anymore, and only presents how to add a community dataset. There is still a small section at the bottom that mentions the datasets that are still on GitHub and redirects to the `ADD_NEW_DATASET.md` guide on GitHub about how to contribute a dataset to the `datasets` library
- the code source doesn't mention "canonical" anymore anywhere. There is still a `GitHubDatasetModuleFactory` class that is left, but I updated the docstring to say that it will be eventually removed in favor of the `HubDatasetModuleFactory` classes that already exist
Would love to have your feedbacks on this !
cc @julien-c @thomwolf @SBrandeis | {
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"Hi @jvanz, thank you for your proposal.\r\n\r\nIn fact, we are aware that it is very common the problem you mention. Because of that, we are currently working in implementing a new version of wikipedia on the Hub, with all data preprocessed (no need to use Apache Beam), from where you will be able to use `data_fil... | 1,645,537,601,000 | 1,645,541,402,000 | null | NONE | null | null | null | **Is your feature request related to a problem? Please describe.**
The Wikipedia dataset can be really big. This is a problem if you want to use it locally in a laptop with the Apache Beam `DirectRunner`. Even if your laptop have a considerable amount of memory (e.g. 32gb).
**Describe the solution you'd like**
I would like to use the `data_files` argument in the `load_dataset` function to define which file in the wikipedia dataset I would like to download. Thus, I can work with the dataset in a smaller machine using the Apache Beam `DirectRunner`.
**Describe alternatives you've considered**
I've tried to use the `simple` Wikipedia dataset. But it's in English and I would like to use Portuguese texts in my model.
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"I think it actually comes from an issue here:\r\n\r\nhttps://github.com/huggingface/datasets/blob/810b12f763f5cf02f2e43565b8890d278b7398cd/src/datasets/utils/file_utils.py#L575-L579\r\n\r\nand \r\n\r\nhttps://github.com/huggingface/datasets/blob/810b12f763f5cf02f2e43565b8890d278b7398cd/src/datasets/utils/streaming... | 1,645,532,836,000 | 1,646,048,124,000 | 1,646,048,124,000 | CONTRIBUTOR | null | false | {
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} | Reported on the forum: https://discuss.huggingface.co/t/error-loading-dataset/14999 | {
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"Thanks for reporting, @anna-kay. We are fixing it.",
"@albertvillanova Thank you for the fast response! However I am still getting the same error:\r\n\r\nDownloading: 2.23kB [00:00, ?B/s]\r\nTraceback (most recent call last):\r\n File \"C:\\Users\\Anna\\PycharmProjects\\summarization\\main.py\", line 17, in <mo... | 1,645,527,427,000 | 1,645,817,269,000 | 1,645,533,524,000 | CONTRIBUTOR | null | null | null | ## Describe the bug
A checksum occurs when downloading the reddit_tifu data (both long & short).
## Steps to reproduce the bug
reddit_tifu_dataset = load_dataset('reddit_tifu', 'long')
## Expected results
The expected result is for the dataset to be downloaded and cached locally.
## Actual results
File "/.../lib/python3.9/site-packages/datasets/utils/info_utils.py", line 40, in verify_checksums
raise NonMatchingChecksumError(error_msg + str(bad_urls))
datasets.utils.info_utils.NonMatchingChecksumError: Checksums didn't match for dataset source files:
['https://drive.google.com/uc?export=download&id=1ffWfITKFMJeqjT8loC8aiCLRNJpc_XnF']
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.18.3
- Platform: Linux-5.13.0-30-generic-x86_64-with-glibc2.31
- Python version: 3.9.7
- PyArrow version: 7.0.0
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"Thanks for reporting, @kolk.\r\n\r\nWe are fixing it. "
] | 1,645,490,613,000 | 1,645,517,559,000 | 1,645,517,559,000 | NONE | null | null | null | ### Describe the bug
Failure to generate dataset msr_sqa because of duplicate keys.
### Steps to reproduce the bug
```
from datasets import load_dataset
load_dataset("msr_sqa")
```
### Expected results
The examples keys should be unique.
**Actual results**
```
>>> load_dataset("msr_sqa")
Downloading:
6.72k/? [00:00<00:00, 148kB/s]
Downloading:
2.93k/? [00:00<00:00, 53.8kB/s]
Using custom data configuration default
Downloading and preparing dataset msr_sqa/default (download: 4.57 MiB, generated: 26.25 MiB, post-processed: Unknown size, total: 30.83 MiB) to /root/.cache/huggingface/datasets/msr_sqa/default/0.0.0/70b2a497bd3cc8fc960a3557d2bad1eac5edde824505e15c9c8ebe4c260fd4d1...
Downloading: 100%
4.80M/4.80M [00:00<00:00, 7.49MB/s]
---------------------------------------------------------------------------
DuplicatedKeysError Traceback (most recent call last)
[/usr/local/lib/python3.7/dist-packages/datasets/builder.py](https://localhost:8080/#) in _prepare_split(self, split_generator)
1080 example = self.info.features.encode_example(record)
-> 1081 writer.write(example, key)
1082 finally:
8 frames
DuplicatedKeysError: FAILURE TO GENERATE DATASET !
Found duplicate Key: nt-639
Keys should be unique and deterministic in nature
During handling of the above exception, another exception occurred:
DuplicatedKeysError Traceback (most recent call last)
[/usr/local/lib/python3.7/dist-packages/datasets/arrow_writer.py](https://localhost:8080/#) in check_duplicate_keys(self)
449 for hash, key in self.hkey_record:
450 if hash in tmp_record:
--> 451 raise DuplicatedKeysError(key)
452 else:
453 tmp_record.add(hash)
DuplicatedKeysError: FAILURE TO GENERATE DATASET !
Found duplicate Key: nt-639
Keys should be unique and deterministic in nature
```
### Environment info
datasets version: 1.18.3
Platform: Google colab notebook
Python version: 3.7
PyArrow version: 6.0.1
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"Hi ! Indeed `map` is dropping the index right now, because one can create a dataset with more or fewer rows using `map` (and therefore the index might not be relevant anymore)\r\n\r\nI guess we could check the resulting dataset length, and if the user hasn't changed the dataset size we could keep the index, what d... | 1,645,480,763,000 | 1,646,233,135,000 | null | NONE | null | null | null | ## Describe the bug
assigning the resulted dataset to original dataset causes lost of the faiss index
## Steps to reproduce the bug
`my_dataset` is a regular loaded dataset. It's a part of a customed dataset structure
```python
self.dataset.add_faiss_index('embeddings')
self.dataset.list_indexes()
# ['embeddings']
dataset2 = my_dataset.map(
lambda x: self._get_nearest_examples_batch(x['text']), batch=True
)
# the unexpected result:
dataset2.list_indexes()
# []
self.dataset.list_indexes()
# ['embeddings']
```
in case something wrong with my `_get_nearest_examples_batch()`, it's like this
```python
def _get_nearest_examples_batch(self, examples, k=5):
queries = embed(examples)
scores_batch, retrievals_batch = self.dataset.get_nearest_examples_batch(self.faiss_column, queries, k)
return {
'neighbors': [batch['text'] for batch in retrievals_batch],
'scores': scores_batch
}
```
## Expected results
`map` shouldn't drop the indexes, in another word, indexes should be carried to the generated dataset
## Actual results
map drops the indexes
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.18.3
- Platform: Ubuntu 20.04.3 LTS
- Python version: 3.8.12
- PyArrow version: 7.0.0
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] | closed | false | null | [] | null | [] | 1,645,383,943,000 | 1,645,433,758,000 | 1,645,433,758,000 | NONE | null | null | null | ## Dataset viewer issue for '*name of the dataset*'
**Link:** *link to the dataset viewer page*
*short description of the issue*
Am I the one who added this dataset ? Yes-No
| {
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https://api.github.com/repos/huggingface/datasets/issues/3763 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3763/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3763/comments | https://api.github.com/repos/huggingface/datasets/issues/3763/events | https://github.com/huggingface/datasets/issues/3763 | 1,145,099,878 | I_kwDODunzps5EQNZm | 3,763 | It's not possible download `20200501.pt` dataset | {
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"Hi @jvanz, thanks for reporting.\r\n\r\nPlease note that Wikimedia website does not longer host Wikipedia dumps for so old dates.\r\n\r\nFor a list of accessible dump dates of `pt` Wikipedia, please see: https://dumps.wikimedia.org/ptwiki/\r\n\r\nYou can load for example `20220220` `pt` Wikipedia:\r\n```python\r\n... | 1,645,382,098,000 | 1,645,445,172,000 | 1,645,435,506,000 | NONE | null | null | null | ## Describe the bug
The dataset `20200501.pt` is broken.
The available datasets: https://dumps.wikimedia.org/ptwiki/
## Steps to reproduce the bug
```python
from datasets import load_dataset
dataset = load_dataset("wikipedia", "20200501.pt", beam_runner='DirectRunner')
```
## Expected results
I expect to download the dataset locally.
## Actual results
```
>>> from datasets import load_dataset
>>> dataset = load_dataset("wikipedia", "20200501.pt", beam_runner='DirectRunner')
Downloading and preparing dataset wikipedia/20200501.pt to /home/jvanz/.cache/huggingface/datasets/wikipedia/20200501.pt/1.0.0/009f923d9b6dd00c00c8cdc7f408f2b47f45dd4f5fb7982a21f9448f4afbe475...
/home/jvanz/anaconda3/envs/tf-gpu/lib/python3.9/site-packages/apache_beam/__init__.py:79: UserWarning: This version of Apache Beam has not been sufficiently tested on Python 3.9. You may encounter bugs or missing features.
warnings.warn(
0%| | 0/1 [00:00<?, ?it/s]
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/jvanz/anaconda3/envs/tf-gpu/lib/python3.9/site-packages/datasets/load.py", line 1702, in load_dataset
builder_instance.download_and_prepare(
File "/home/jvanz/anaconda3/envs/tf-gpu/lib/python3.9/site-packages/datasets/builder.py", line 594, in download_and_prepare
self._download_and_prepare(
File "/home/jvanz/anaconda3/envs/tf-gpu/lib/python3.9/site-packages/datasets/builder.py", line 1245, in _download_and_prepare
super()._download_and_prepare(
File "/home/jvanz/anaconda3/envs/tf-gpu/lib/python3.9/site-packages/datasets/builder.py", line 661, in _download_and_prepare
split_generators = self._split_generators(dl_manager, **split_generators_kwargs)
File "/home/jvanz/.cache/huggingface/modules/datasets_modules/datasets/wikipedia/009f923d9b6dd00c00c8cdc7f408f2b47f45dd4f5fb7982a21f9448f4afbe475/wikipedia.py", line 420, in _split_generators
downloaded_files = dl_manager.download_and_extract({"info": info_url})
File "/home/jvanz/anaconda3/envs/tf-gpu/lib/python3.9/site-packages/datasets/utils/download_manager.py", line 307, in download_and_extract
return self.extract(self.download(url_or_urls))
File "/home/jvanz/anaconda3/envs/tf-gpu/lib/python3.9/site-packages/datasets/utils/download_manager.py", line 195, in download
downloaded_path_or_paths = map_nested(
File "/home/jvanz/anaconda3/envs/tf-gpu/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 260, in map_nested
mapped = [
File "/home/jvanz/anaconda3/envs/tf-gpu/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 261, in <listcomp>
_single_map_nested((function, obj, types, None, True))
File "/home/jvanz/anaconda3/envs/tf-gpu/lib/python3.9/site-packages/datasets/utils/py_utils.py", line 196, in _single_map_nested
return function(data_struct)
File "/home/jvanz/anaconda3/envs/tf-gpu/lib/python3.9/site-packages/datasets/utils/download_manager.py", line 216, in _download
return cached_path(url_or_filename, download_config=download_config)
File "/home/jvanz/anaconda3/envs/tf-gpu/lib/python3.9/site-packages/datasets/utils/file_utils.py", line 298, in cached_path
output_path = get_from_cache(
File "/home/jvanz/anaconda3/envs/tf-gpu/lib/python3.9/site-packages/datasets/utils/file_utils.py", line 612, in get_from_cache
raise FileNotFoundError(f"Couldn't find file at {url}")
FileNotFoundError: Couldn't find file at https://dumps.wikimedia.org/ptwiki/20200501/dumpstatus.json
```
## Environment info
```
- `datasets` version: 1.18.3
- Platform: Linux-5.3.18-150300.59.49-default-x86_64-with-glibc2.31
- Python version: 3.9.7
- PyArrow version: 6.0.1
``` | {
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https://api.github.com/repos/huggingface/datasets/issues/3762 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3762/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3762/comments | https://api.github.com/repos/huggingface/datasets/issues/3762/events | https://github.com/huggingface/datasets/issues/3762 | 1,144,849,557 | I_kwDODunzps5EPQSV | 3,762 | `Dataset.class_encode` should support custom class names | {
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"Hi @Dref360, thanks a lot for your proposal.\r\n\r\nIt totally makes sense to have more flexibility when class encoding, I agree.\r\n\r\nYou could even further customize the class encoding by passing an instance of `ClassLabel` itself (instead of replicating `ClassLabel` instantiation arguments as `Dataset.class_e... | 1,645,305,705,000 | 1,645,445,795,000 | 1,645,445,795,000 | CONTRIBUTOR | null | null | null | I can make a PR, just wanted approval before starting.
**Is your feature request related to a problem? Please describe.**
It is often the case that classes are not ordered in alphabetical order. Current `class_encode_column` sort the classes before indexing.
https://github.com/huggingface/datasets/blob/master/src/datasets/arrow_dataset.py#L1235
**Describe the solution you'd like**
I would like to add a **optional** parameter `class_names` to `class_encode_column` that would be used for the mapping instead of sorting the unique values.
**Describe alternatives you've considered**
One can use map instead. I find it harder to read.
```python
CLASS_NAMES = ['apple', 'orange', 'potato']
ds = ds.map(lambda item: CLASS_NAMES.index(item[label_column]))
# Proposition
ds = ds.class_encode_column(label_column, CLASS_NAMES)
```
**Additional context**
I can make the PR if this feature is accepted.
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https://api.github.com/repos/huggingface/datasets/issues/3761 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3761/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3761/comments | https://api.github.com/repos/huggingface/datasets/issues/3761/events | https://github.com/huggingface/datasets/issues/3761 | 1,144,830,702 | I_kwDODunzps5EPLru | 3,761 | Know your data for HF hub | {
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"Hi @Muhtasham you should take a look at https://huggingface.co/blog/data-measurements-tool and accompanying demo app at https://huggingface.co/spaces/huggingface/data-measurements-tool\r\n\r\nWe would be interested in your feedback. cc @meg-huggingface @sashavor @yjernite "
] | 1,645,300,127,000 | 1,645,452,923,000 | 1,645,452,923,000 | NONE | null | null | null | **Is your feature request related to a problem? Please describe.**
Would be great to see be able to understand datasets with the goal of improving data quality, and helping mitigate fairness and bias issues.
**Describe the solution you'd like**
Something like https://knowyourdata.withgoogle.com/ for HF hub | {
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https://api.github.com/repos/huggingface/datasets/issues/3760 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3760/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3760/comments | https://api.github.com/repos/huggingface/datasets/issues/3760/events | https://github.com/huggingface/datasets/issues/3760 | 1,144,804,558 | I_kwDODunzps5EPFTO | 3,760 | Unable to view the Gradio flagged call back dataset | {
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"Hi @kingabzpro.\r\n\r\nI think you need to create a loading script that creates the dataset from the CSV file and the image paths.\r\n\r\nAs example, you could have a look at the Food-101 dataset: https://huggingface.co/datasets/food101\r\n- Loading script: https://huggingface.co/datasets/food101/blob/main/food101... | 1,645,292,708,000 | 1,647,933,131,000 | 1,647,933,131,000 | NONE | null | null | null | ## Dataset viewer issue for '*savtadepth-flags*'
**Link:** *[savtadepth-flags](https://huggingface.co/datasets/kingabzpro/savtadepth-flags)*
*with the Gradio 2.8.1 the dataset viers stopped working. I tried to add values manually but its not working. The dataset is also not showing the link with the app https://huggingface.co/spaces/kingabzpro/savtadepth.*
Am I the one who added this dataset ? Yes
| {
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https://api.github.com/repos/huggingface/datasets/issues/3759 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3759/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3759/comments | https://api.github.com/repos/huggingface/datasets/issues/3759/events | https://github.com/huggingface/datasets/pull/3759 | 1,143,400,770 | PR_kwDODunzps4zGhQu | 3,759 | Rename GenerateMode to DownloadMode | {
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"Thanks! Used here: https://github.com/huggingface/datasets-preview-backend/blob/main/src/datasets_preview_backend/models/dataset.py#L26 :) "
] | 1,645,203,233,000 | 1,645,538,244,000 | 1,645,532,572,000 | MEMBER | null | false | {
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} | This PR:
- Renames `GenerateMode` to `DownloadMode`
- Implements `DeprecatedEnum`
- Deprecates `GenerateMode`
Close #769. | {
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"We usually find issues with files hosted at Google Drive...\r\n\r\nIn this case we download the Google Drive Virus scan warning instead of the data file.",
"Fixed: https://huggingface.co/datasets/head_qa/viewer/en/train. Thanks\r\n\r\n<img width=\"1551\" alt=\"Capture d’écran 2022-02-28 à 15 29 04\" src=\"http... | 1,645,201,963,000 | 1,646,058,558,000 | 1,645,454,359,000 | CONTRIBUTOR | null | null | null | ## Describe the bug
A file for the `head_qa` dataset is missing (https://drive.google.com/u/0/uc?export=download&id=1a_95N5zQQoUCq8IBNVZgziHbeM-QxG2t/HEAD_EN/train_HEAD_EN.json)
## Steps to reproduce the bug
```python
>>> from datasets import load_dataset
>>> load_dataset("head_qa", name="en")
```
## Expected results
The dataset should be loaded
## Actual results
```
Downloading and preparing dataset head_qa/en (download: 75.69 MiB, generated: 2.69 MiB, post-processed: Unknown size, total: 78.38 MiB) to /home/slesage/.cache/huggingface/datasets/head_qa/en/1.1.0/583ab408e8baf54aab378c93715fadc4d8aa51b393e27c3484a877e2ac0278e9...
Downloading data: 2.21kB [00:00, 2.05MB/s]
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/datasets/load.py", line 1729, in load_dataset
builder_instance.download_and_prepare(
File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/datasets/builder.py", line 594, in download_and_prepare
self._download_and_prepare(
File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/datasets/builder.py", line 665, in _download_and_prepare
verify_checksums(
File "/home/slesage/hf/datasets-preview-backend/.venv/lib/python3.9/site-packages/datasets/utils/info_utils.py", line 40, in verify_checksums
raise NonMatchingChecksumError(error_msg + str(bad_urls))
datasets.utils.info_utils.NonMatchingChecksumError: Checksums didn't match for dataset source files:
['https://drive.google.com/u/0/uc?export=download&id=1a_95N5zQQoUCq8IBNVZgziHbeM-QxG2t']
```
## Environment info
- `datasets` version: 1.18.4.dev0
- Platform: Linux-5.11.0-1028-aws-x86_64-with-glibc2.31
- Python version: 3.9.6
- PyArrow version: 6.0.1
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https://api.github.com/repos/huggingface/datasets/issues/3757 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3757/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3757/comments | https://api.github.com/repos/huggingface/datasets/issues/3757/events | https://github.com/huggingface/datasets/pull/3757 | 1,143,300,880 | PR_kwDODunzps4zGK7p | 3,757 | Add perplexity to metrics | {
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"Awesome thank you ! The implementation of the parent `Metric` class was assuming that all metrics were supposed to have references/predictions pairs - I just changed that so you don't have to override `compute()`. I took the liberty of doing the changes directly inside this PR to make sure it works as expected wit... | 1,645,199,543,000 | 1,645,809,214,000 | 1,645,809,214,000 | CONTRIBUTOR | null | false | {
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} | Adding perplexity metric
This code differs from the code in [this](https://huggingface.co/docs/transformers/perplexity) HF blog post because the blogpost code fails in at least the following circumstances:
- returns nans whenever the stride = 1
- hits a runtime error when the stride is significantly larger than the max model length (e.g. if max_model_length = 512 and stride = 1024)
Note that:
- As it is, it only works for causal models. Pseudoperplexity can be added later as another metric to work with masked language models.
- It takes in a list of strings so that it can be dataset independent. This does mean that it doesn't currently batch inputs, and is therefore relatively slow.
- It overwrites the metrics compute() function for a specific perplexity compute() function. This is because the current general metrics compute() function requires model-generated predictions, which doesn't make sense in the context of perplexity | {
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https://api.github.com/repos/huggingface/datasets/issues/3756 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3756/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3756/comments | https://api.github.com/repos/huggingface/datasets/issues/3756/events | https://github.com/huggingface/datasets/issues/3756 | 1,143,273,825 | I_kwDODunzps5EJPlh | 3,756 | Images get decoded when using `map()` with `input_columns` argument on a dataset | {
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"Hi! If I'm not mistaken, this behavior is intentional, but I agree it could be more intuitive.\r\n\r\n@albertvillanova Do you remember why you decided not to decode columns in the `Audio` feature PR when `input_columns` is not `None`? IMO we should decode those columns, and we don't even have to use lazy structure... | 1,645,198,538,000 | 1,646,135,359,000 | null | NONE | null | null | null | ## Describe the bug
The `datasets.features.Image` feature class decodes image data by default. Expectedly, when indexing a dataset or using the `map()` method, images are returned as PIL Image instances.
However, when calling `map()` and setting a specific data column with the `input_columns` argument, the image data is passed as raw byte representation to the mapping function.
## Steps to reproduce the bug
```python
from datasets import load_dataset
from torchvision import transforms
from PIL.Image import Image
dataset = load_dataset('mnist', split='train')
def transform_all_columns(example):
# example['image'] is encoded as PIL Image
assert isinstance(example['image'], Image)
return example
def transform_image_column(image):
# image is decoded here and represented as raw bytes
assert isinstance(image, Image)
return image
# single-sample dataset for debugging purposes
dev = dataset.select([0])
dev.map(transform_all_columns)
dev.map(transform_image_column, input_columns='image')
```
## Expected results
Image data should be passed in decoded form, i.e. as PIL Image objects to the mapping function unless the `decode` attribute on the image feature is set to `False`.
## Actual results
The mapping function receives images as raw byte data.
## Environment info
- `datasets` version: 1.18.3
- Platform: Linux-5.11.0-49-generic-x86_64-with-glibc2.32
- Python version: 3.8.0b4
- PyArrow version: 7.0.0
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https://api.github.com/repos/huggingface/datasets/issues/3755 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3755/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3755/comments | https://api.github.com/repos/huggingface/datasets/issues/3755/events | https://github.com/huggingface/datasets/issues/3755 | 1,143,032,961 | I_kwDODunzps5EIUyB | 3,755 | Cannot preview dataset | {
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"Thanks for reporting. The dataset viewer depends on some backend treatments, and for now, they might take some hours to get processed. We're working on improving it.",
"It has finally been processed. Thanks for the patience.",
"Thanks for the info @severo !"
] | 1,645,189,605,000 | 1,645,281,028,000 | 1,645,198,893,000 | NONE | null | null | null | ## Dataset viewer issue for '*rubrix/news*'
**Link:https://huggingface.co/datasets/rubrix/news** *link to the dataset viewer page*
Cannot see the dataset preview:
```
Status code: 400
Exception: Status400Error
Message: Not found. Cache is waiting to be refreshed.
```
Am I the one who added this dataset ? No
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https://api.github.com/repos/huggingface/datasets/issues/3754 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3754/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3754/comments | https://api.github.com/repos/huggingface/datasets/issues/3754/events | https://github.com/huggingface/datasets/issues/3754 | 1,142,886,536 | I_kwDODunzps5EHxCI | 3,754 | Overflowing indices in `select` | {
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"Fixed on master (see https://github.com/huggingface/datasets/pull/3719).",
"Awesome, I did not find that one! Thanks."
] | 1,645,183,852,000 | 1,645,184,303,000 | 1,645,184,303,000 | MEMBER | null | null | null | ## Describe the bug
The `Dataset.select` function seems to accept indices that are larger than the dataset size and seems to effectively use `index %len(ds)`.
## Steps to reproduce the bug
```python
from datasets import Dataset
ds = Dataset.from_dict({"test": [1,2,3]})
ds = ds.select(range(5))
print(ds)
print()
print(ds["test"])
```
Result:
```python
Dataset({
features: ['test'],
num_rows: 5
})
[1, 2, 3, 1, 2]
```
This behaviour is not documented and can lead to unexpected behaviour when for example taking a sample larger than the dataset and thus creating a lot of duplicates.
## Expected results
It think this should throw an error or at least a very big warning:
```python
IndexError: Invalid key: 5 is out of bounds for size 3
```
## Environment info
- `datasets` version: 1.18.3
- Platform: macOS-12.0.1-x86_64-i386-64bit
- Python version: 3.9.10
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https://api.github.com/repos/huggingface/datasets/issues/3753 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3753/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3753/comments | https://api.github.com/repos/huggingface/datasets/issues/3753/events | https://github.com/huggingface/datasets/issues/3753 | 1,142,821,144 | I_kwDODunzps5EHhEY | 3,753 | Expanding streaming capabilities | {
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"Related to: https://github.com/huggingface/datasets/issues/3444",
"Cool ! `filter` will be very useful. There can be a filter that you can apply on a streaming dataset:\r\n```python\r\nload_dataset(..., streaming=True).filter(lambda x: x[\"lang\"] == \"sw\")\r\n```\r\n\r\nOtherwise if you want to apply a filter ... | 1,645,181,141,000 | 1,651,587,758,000 | null | MEMBER | null | null | null | Some ideas for a few features that could be useful when working with large datasets in streaming mode.
## `filter` for `IterableDataset`
Adding filtering to streaming datasets would be useful in several scenarios:
- filter a dataset with many languages for a subset of languages
- filter a dataset for specific licenses
- other custom logic to get a subset
The only way to achieve this at the moment is I think through writing a custom loading script and implementing filters there.
## `IterableDataset` to `Dataset` conversion
In combination with the above filter a functionality to "play" the whole stream would be useful. The motivation is that often one might filter the dataset to get a manageable size for experimentation. In that case streaming mode is no longer necessary as the filtered dataset is small enough and it would be useful to be able to play through the whole stream to create a normal `Dataset` with all its benefits.
```python
ds = load_dataset("some_large_dataset", streaming=True)
ds_filter = ds.filter(lambda x: x["lang"]="fr")
ds_filter = ds_filter.stream() # here the `IterableDataset` is converted to a `Dataset`
```
Naturally, this could be expanded with `stream(n=1000)` which creates a `Dataset` with the first `n` elements similar to `take`.
## Stream to the Hub
While streaming allows to use a dataset as is without saving the whole dataset on the local machine it is currently not possible to process a dataset and add it to the hub. The only way to do this is by downloading the full dataset and saving the processed dataset again before pushing them to the hub. The API could looks something like:
```python
ds = load_dataset("some_large_dataset", streaming=True)
ds_filter = ds.filter(some_filter_func)
ds_processed = ds_filter.map(some_processing_func)
ds_processed.push_to_hub("new_better_dataset", batch_size=100_000)
```
Under the hood this could be done by processing and aggregating `batch_size` elements and then pushing that batch as a single file to the hub. With this functionality one could process and create TB scale datasets while only requiring size of `batch_size` local disk space.
cc @lhoestq @albertvillanova | {
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Fix #3750. | {
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} | In the README guide (and consequently in many datasets) there was a typo in the train split name:
```
| Tain | Valid | Test |
```
This PR:
- fixes the typo in the train split name
- fixes the column alignment of the split tables
in the README guide and in all datasets. | {
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"Thnaks for reporting @jaketae. We are fixing it. "
] | 1,645,163,199,000 | 1,645,196,171,000 | 1,645,196,171,000 | MEMBER | null | null | null | ## Describe the bug
Cannot download cats_vs_dogs dataset due to `NonMatchingSplitsSizesError`.
## Steps to reproduce the bug
```python
from datasets import load_dataset
dataset = load_dataset("cats_vs_dogs")
```
## Expected results
Loading is successful.
## Actual results
```
NonMatchingSplitsSizesError: [{'expected': SplitInfo(name='train', num_bytes=7503250, num_examples=23422, dataset_name='cats_vs_dogs'), 'recorded': SplitInfo(name='train', num_bytes=7262410, num_examples=23410, dataset_name='cats_vs_dogs')}]
```
## Environment info
Reproduced on a fresh [Colab notebook](https://colab.research.google.com/drive/13GTvrSJbBGvL2ybDdXCBZwATd6FOkMub?usp=sharing).
## Additional Context
Originally reported in https://github.com/huggingface/transformers/issues/15698.
cc @mariosasko | {
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https://api.github.com/repos/huggingface/datasets/issues/3749 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3749/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3749/comments | https://api.github.com/repos/huggingface/datasets/issues/3749/events | https://github.com/huggingface/datasets/pull/3749 | 1,142,156,678 | PR_kwDODunzps4zCKqg | 3,749 | Add tqdm arguments | {
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"Hi ! Thanks this will be very useful :)\r\n\r\nIt looks like there are some changes in the github diff that are not related to your contribution, can you try fixing this by merging `master` into your PR, or create a new PR from an updated version of `master` ?",
"I have already solved the conflict on this latest... | 1,645,148,086,000 | 1,646,732,328,000 | 1,646,732,328,000 | NONE | null | false | {
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} | In this PR, tqdm arguments can be passed to the map() function and such, in order to be more flexible. | {
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https://api.github.com/repos/huggingface/datasets/issues/3748 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3748/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3748/comments | https://api.github.com/repos/huggingface/datasets/issues/3748/events | https://github.com/huggingface/datasets/pull/3748 | 1,142,128,763 | PR_kwDODunzps4zCEyM | 3,748 | Add tqdm arguments | {
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1. It is able to show the progress bar by adding the length of the iterator.
2. Pass in tqdm_kwargs so that can enable more feasibility for the control of tqdm library. | {
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] | open | false | null | [] | null | [] | 1,645,121,771,000 | 1,645,121,771,000 | null | CONTRIBUTOR | null | null | null | ## Describe the bug
Only some datasets have a subset (as in `load_dataset(name, subset)`). If you pass an invalid subset, an error should be thrown.
## Steps to reproduce the bug
```python
import datasets
datasets.load_dataset('rotten_tomatoes', 'asdfasdfa')
```
## Expected results
This should break, since `'asdfasdfa'` isn't a subset of the `rotten_tomatoes` dataset.
## Actual results
This API call silently succeeds. | {
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} | When shuffling in streaming mode, those two entangled lists are shuffled independently. In this PR I changed this to shuffle the lists of same length with the exact same seed, in order for the files and metadata to still be aligned.
```python
gen_kwargs = {
"files": [os.path.join(data_dir, filename) for filename in all_files],
"metadata_files": [all_metadata[filename] for filename in all_files],
}
```
IMO this is important to avoid big but silent issues.
Fix https://github.com/huggingface/datasets/issues/3744 | {
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"Hmm the doctest failed again - maybe the full result needs to be on one single line",
"cc @lhoestq for the final review",
"Cool ! Feel free to merge if it's all good for you"
] | 1,645,113,137,000 | 1,646,745,626,000 | 1,646,745,626,000 | CONTRIBUTOR | null | false | {
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} | This PR adds the mean Intersection-over-Union metric to the library, useful for tasks like semantic segmentation.
It is entirely based on mmseg's [implementation](https://github.com/open-mmlab/mmsegmentation/blob/master/mmseg/core/evaluation/metrics.py).
I've removed any PyTorch dependency, and rely on Numpy only. | {
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https://api.github.com/repos/huggingface/datasets/issues/3744 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3744/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3744/comments | https://api.github.com/repos/huggingface/datasets/issues/3744/events | https://github.com/huggingface/datasets/issues/3744 | 1,141,461,165 | I_kwDODunzps5ECVCt | 3,744 | Better shards shuffling in streaming mode | {
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"node_id": "MDU6... | closed | false | null | [] | null | [] | 1,645,110,441,000 | 1,645,628,458,000 | 1,645,628,458,000 | MEMBER | null | null | null | Sometimes a dataset script has a `_split_generators` that returns several files as well as the corresponding metadata of each file. It often happens that they end up in two separate lists in the `gen_kwargs`:
```python
gen_kwargs = {
"files": [os.path.join(data_dir, filename) for filename in all_files],
"metadata_files": [all_metadata[filename] for filename in all_files],
}
```
It happened for Multilingual Spoken Words for example in #3666
However currently **the two lists are shuffled independently** when shuffling the shards in streaming mode. This leads to `_generate_examples` not having the right metadata for each file.
To prevent this issue I suggest that we always shuffle lists of the same length the exact same way to avoid such a big but silent issue.
cc @polinaeterna | {
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https://api.github.com/repos/huggingface/datasets/issues/3743 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3743/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3743/comments | https://api.github.com/repos/huggingface/datasets/issues/3743/events | https://github.com/huggingface/datasets/pull/3743 | 1,141,176,011 | PR_kwDODunzps4y-2Do | 3,743 | initial monash time series forecasting repository | {
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"_The documentation is not available anymore as the PR was closed or merged._",
"The CI fails are unrelated to this PR, merging !",
"thanks 🙇🏽 "
] | 1,645,095,091,000 | 1,647,856,481,000 | 1,647,856,216,000 | CONTRIBUTOR | null | false | {
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https://api.github.com/repos/huggingface/datasets/issues/3742 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3742/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3742/comments | https://api.github.com/repos/huggingface/datasets/issues/3742/events | https://github.com/huggingface/datasets/pull/3742 | 1,141,174,549 | PR_kwDODunzps4y-1v5 | 3,742 | Fix ValueError message formatting in int2str | {
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} | Hi!
I bumped into this particular `ValueError` during my work (because an instance of `np.int64` was passed instead of regular Python `int`), and so I had to `print(type(values))` myself. Apparently, it's just the missing `f` to make message an f-string.
It ain't much for a contribution, but it's honest work. Hope it spares someone else a few seconds in the future 😃 | {
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https://api.github.com/repos/huggingface/datasets/issues/3741 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3741/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3741/comments | https://api.github.com/repos/huggingface/datasets/issues/3741/events | https://github.com/huggingface/datasets/pull/3741 | 1,141,132,649 | PR_kwDODunzps4y-syt | 3,741 | Rm sphinx doc | {
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} | Checklist
- [x] Update circle ci yaml
- [x] Delete sphinx static & python files in docs dir
- [x] Update readme in docs dir
- [ ] Update docs config in setup.py | {
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https://api.github.com/repos/huggingface/datasets/issues/3740 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3740/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3740/comments | https://api.github.com/repos/huggingface/datasets/issues/3740/events | https://github.com/huggingface/datasets/pull/3740 | 1,140,720,739 | PR_kwDODunzps4y9XAP | 3,740 | Support streaming for pubmed | {
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"@albertvillanova just FYI, since you were so helpful with the previous pubmed issue :) ",
"IIRC streaming from FTP is not fully tested yet, so I'm fine with switching to HTTPS for now, as long as the download speed/availability is great",
"@albertvillanova Thanks for pointing me to the `ET` module replacement.... | 1,645,057,102,000 | 1,645,195,333,000 | 1,645,195,333,000 | CONTRIBUTOR | null | false | {
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} | This PR makes some minor changes to the `pubmed` dataset to allow for `streaming=True`. Fixes #3739.
Basically, I followed the C4 dataset which works in streaming mode as an example, and made the following changes:
* Change URL prefix from `ftp://` to `https://`
* Explicilty `open` the filename and pass the XML contents to `etree.fromstring(xml_str)`
The Github diff tool makes it look like the changes are larger than they are, sorry about that.
I tested locally and the `pubmed` dataset now works in both normal and streaming modes. There is some overhead at the start of each shard in streaming mode as building the XML tree online is quite slow (each pubmed .xml.gz file is ~20MB), but the overhead gets amortized over all the samples in the shard. On my laptop with a single CPU worker I am able to stream at about ~600 samples/s. | {
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https://api.github.com/repos/huggingface/datasets/issues/3739 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3739/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3739/comments | https://api.github.com/repos/huggingface/datasets/issues/3739/events | https://github.com/huggingface/datasets/issues/3739 | 1,140,329,189 | I_kwDODunzps5D-Arl | 3,739 | Pubmed dataset does not work in streaming mode | {
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"Thanks for reporting, @abhi-mosaic (related to #3655).\r\n\r\nPlease note that `xml.etree.ElementTree.parse` already supports streaming:\r\n- #3476\r\n\r\nNo need to refactor to use `open`/`xopen`. Is is enough with importing the package `as ET` (instead of `as etree`)."
] | 1,645,031,617,000 | 1,645,195,333,000 | 1,645,195,333,000 | CONTRIBUTOR | null | null | null | ## Describe the bug
Trying to use the `pubmed` dataset with `streaming=True` fails.
## Steps to reproduce the bug
```python
import datasets
pubmed_train = datasets.load_dataset('pubmed', split='train', streaming=True)
print (next(iter(pubmed_train)))
```
## Expected results
I would expect to see the first training sample from the pubmed dataset.
## Actual results
```
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "/Users/abhinav/Documents/mosaicml/mosaicml_venv/lib/python3.8/site-packages/datasets/iterable_dataset.py", line 367, in __iter__
for key, example in self._iter():
File "/Users/abhinav/Documents/mosaicml/mosaicml_venv/lib/python3.8/site-packages/datasets/iterable_dataset.py", line 364, in _iter
yield from ex_iterable
File "/Users/abhinav/Documents/mosaicml/mosaicml_venv/lib/python3.8/site-packages/datasets/iterable_dataset.py", line 79, in __iter__
for key, example in self.generate_examples_fn(**self.kwargs):
File "/Users/abhinav/.cache/huggingface/modules/datasets_modules/datasets/pubmed/9715addf10c42a7877a2149ae0c5f2fddabefc775cd1bd9b03ac3f012b86ce46/pubmed.py", line 373, in _generate_examples
tree = etree.parse(filename)
File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/xml/etree/ElementTree.py", line 1202, in parse
tree.parse(source, parser)
File "/Library/Developer/CommandLineTools/Library/Frameworks/Python3.framework/Versions/3.8/lib/python3.8/xml/etree/ElementTree.py", line 584, in parse
source = open(source, "rb")
FileNotFoundError: [Errno 2] No such file or directory: 'gzip://pubmed21n0001.xml::ftp://ftp.ncbi.nlm.nih.gov/pubmed/baseline/pubmed21n0001.xml.gz'
```
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.18.2
- Platform: macOS-11.4-x86_64-i386-64bit
- Python version: 3.8.2
- PyArrow version: 6.0.0
## Comments
The error looks like an issue with `open` vs. `xopen` inside the `xml` package. It looks like it's trying to open the remote source URL, which has been edited with prefix `gzip://...`.
Maybe there can be an explicit `xopen` before passing the raw data to `etree`, something like:
```python
# Before
tree = etree.parse(filename)
root = tree.getroot()
# After
with xopen(filename) as f:
data_str = f.read()
root = etree.fromstring(data_str)
``` | {
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https://api.github.com/repos/huggingface/datasets/issues/3738 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3738/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3738/comments | https://api.github.com/repos/huggingface/datasets/issues/3738/events | https://github.com/huggingface/datasets/issues/3738 | 1,140,164,253 | I_kwDODunzps5D9Yad | 3,738 | For data-only datasets, streaming and non-streaming don't behave the same | {
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"Note that we might change the heuristic and create a different config per file, at least in that case.",
"Hi @severo, thanks for reporting.\r\n\r\nYes, this happens because when non-streaming, a cast of all data is done in order to \"concatenate\" it all into a single dataset (thus the error), while this casting... | 1,645,024,857,000 | 1,645,453,495,000 | null | CONTRIBUTOR | null | null | null | See https://huggingface.co/datasets/huggingface/transformers-metadata: it only contains two JSON files.
In streaming mode, the files are concatenated, and thus the rows might be dictionaries with different keys:
```python
import datasets as ds
iterable_dataset = ds.load_dataset("huggingface/transformers-metadata", split="train", streaming=True);
rows = list(iterable_dataset.take(100))
rows[0]
# {'model_type': 'albert', 'pytorch': True, 'tensorflow': True, 'flax': True, 'processor': 'AutoTokenizer'}
rows[99]
# {'model_class': 'BartModel', 'pipeline_tag': 'feature-extraction', 'auto_class': 'AutoModel'}
```
In normal mode, an exception is thrown:
```python
import datasets as ds
dataset = ds.load_dataset("huggingface/transformers-metadata", split="train");
```
```
ValueError: Couldn't cast
model_class: string
pipeline_tag: string
auto_class: string
to
{'model_type': Value(dtype='string', id=None), 'pytorch': Value(dtype='bool', id=None), 'tensorflow': Value(dtype='bool', id=None), 'flax': Value(dtype='bool', id=None), 'processor': Value(dtype='string', id=None)}
because column names don't match
``` | {
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https://api.github.com/repos/huggingface/datasets/issues/3737 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3737/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3737/comments | https://api.github.com/repos/huggingface/datasets/issues/3737/events | https://github.com/huggingface/datasets/pull/3737 | 1,140,148,050 | PR_kwDODunzps4y7uFf | 3,737 | Make RedCaps streamable | {
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@lhoestq Using `data/redcaps_v1.0_annotations.zip` as a download URL gives an error locally when running `datasets-cli test` (will investigate this another time) | {
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"I just changed to `dl_manager.is_streaming` rather than an additional parameter `streaming` that has to be handled by the DatasetBuilder class - this way the streaming logic doesn't interfere with the base builder's code.\r\n\r\nI think it's better this way, but let me know if you preferred the previous way and I ... | 1,645,023,689,000 | 1,645,521,224,000 | 1,645,521,223,000 | MEMBER | null | false | {
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} | Continuation of https://github.com/huggingface/datasets/pull/3664:
- pass the `streaming` parameter to _split_generator
- update @anton-l's code to use this parameter for `common_voice`
- add a comment to explain why we use `download_and_extract` in non-streaming and `iter_archive` in streaming
Now the `common_voice` dataset has a local path back in `ds["path"]`, and this field is `None` in streaming mode.
cc @patrickvonplaten @anton-l @albertvillanova | {
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https://api.github.com/repos/huggingface/datasets/issues/3735 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3735/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3735/comments | https://api.github.com/repos/huggingface/datasets/issues/3735/events | https://github.com/huggingface/datasets/issues/3735 | 1,140,087,891 | I_kwDODunzps5D9FxT | 3,735 | Performance of `datasets` at scale | {
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"> using command line git-lfs - [...] 300MB/s!\r\n\r\nwhich server location did you upload from?",
"From GCP region `us-central1-a`.",
"The most surprising part to me is the saving time. Wondering if it could be due to compression (`ParquetWriter` uses SNAPPY compression by default; it can be turned off with `... | 1,645,021,412,000 | 1,647,335,729,000 | null | MEMBER | null | null | null | # Performance of `datasets` at 1TB scale
## What is this?
During the processing of a large dataset I monitored the performance of the `datasets` library to see if there are any bottlenecks. The insights of this analysis could guide the decision making to improve the performance of the library.
## Dataset
The dataset is a 1.1TB extract from GitHub with 120M code files and is stored as 5000 `.json.gz` files. The goal of the preprocessing is to remove duplicates and filter files based on their stats. While the calculating of the hashes for deduplication and stats for filtering can be parallelized the filtering itself is run with a single process. After processing the files are pushed to the hub.
## Machine
The experiment was run on a `m1` machine on GCP with 96 CPU cores and 1.3TB RAM.
## Performance breakdown
- Loading the data **3.5h** (_30sec_ from cache)
- **1h57min** single core loading (not sure what is going on here, corresponds to second progress bar)
- **1h10min** multi core json reading
- **20min** remaining time before and after the two main processes mentioned above
- Process the data **2h** (_20min_ from cache)
- **20min** Getting reading for processing
- **40min** Hashing and files stats (96 workers)
- **58min** Deduplication filtering (single worker)
- Save parquet files **5h**
- Saving 1000 parquet files (16 workers)
- Push to hub **37min**
- **34min** git add
- **3min** git push (several hours with `Repository.git_push()`)
## Conclusion
It appears that loading and saving the data is the main bottleneck at that scale (**8.5h**) whereas processing (**2h**) and pushing the data to the hub (**0.5h**) is relatively fast. To optimize the performance at this scale it would make sense to consider such an end-to-end example and target the bottlenecks which seem to be loading from and saving to disk. The processing itself seems to run relatively fast.
## Notes
- map operation on a 1TB dataset with 96 workers requires >1TB RAM
- map operation does not maintain 100% CPU utilization with 96 workers
- sometimes when the script crashes all the data files have a corresponding `*.lock` file in the data folder (or multiple e.g. `*.lock.lock` when it happened a several times). This causes the cache **not** to be triggered (which is significant at that scale) - i guess because there are new data files
- parallelizing `to_parquet` decreased the saving time from 17h to 5h, however adding more workers at this point had almost no effect. not sure if this is:
a) a bug in my parallelization logic,
b) i/o limit to load data form disk to memory or
c) i/o limit to write from memory to disk.
- Using `Repository.git_push()` was much slower than using command line `git-lfs` - 10-20MB/s vs. 300MB/s! The `Dataset.push_to_hub()` function is even slower as it only uploads one file at a time with only a few MB/s, whereas `Repository.git_push()` pushes files in parallel (each at a similar speed).
cc @lhoestq @julien-c @LysandreJik @SBrandeis
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"followers_... | null | [] | 1,645,017,457,000 | 1,645,084,465,000 | 1,645,084,465,000 | MEMBER | null | null | null | ## Describe the bug
NewsQA dataset has the following bugs:
- the field `validated_answers` is an exact copy of the field `answers` but with the addition of `'count': [0]` to each dict
- the field `badQuestion` does not appear in `answers` nor `validated_answers`
## Steps to reproduce the bug
By inspecting the dataset script we can see that:
- the parsing of `validated_answers` is a copy-paste of the one for `answers`
- the `badQuestion` field is ignored in the parsing of both `answers` and `validated_answers`
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https://api.github.com/repos/huggingface/datasets/issues/3732 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3732/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3732/comments | https://api.github.com/repos/huggingface/datasets/issues/3732/events | https://github.com/huggingface/datasets/pull/3732 | 1,140,004,022 | PR_kwDODunzps4y7PTU | 3,732 | Support streaming in size estimation function in `push_to_hub` | {
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"would this allow to include the size in the dataset info without downloading the files? related to https://github.com/huggingface/datasets/pull/3670",
"@severo I don't think so. We could use this to get `info.download_checksums[\"num_bytes\"]`, but we must process the files to get the rest of the size info. "
] | 1,645,017,048,000 | 1,645,467,525,000 | 1,645,467,524,000 | CONTRIBUTOR | null | false | {
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https://api.github.com/repos/huggingface/datasets/issues/3730 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3730/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3730/comments | https://api.github.com/repos/huggingface/datasets/issues/3730/events | https://github.com/huggingface/datasets/issues/3730 | 1,139,545,613 | I_kwDODunzps5D7BYN | 3,730 | Checksum Error when loading multi-news dataset | {
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"Thanks for reporting @byw2.\r\nWe are fixing it.\r\nIn the meantime, you can load the dataset by passing `ignore_verifications=True`:\r\n ```python\r\ndataset = load_dataset(\"multi_news\", ignore_verifications=True)"
] | 1,644,988,268,000 | 1,645,041,906,000 | 1,645,001,326,000 | NONE | null | null | null | ## Describe the bug
When using the load_dataset function from datasets module to load the Multi-News dataset, does not load the dataset but throws Checksum Error instead.
## Steps to reproduce the bug
```python
from datasets import load_dataset
dataset = load_dataset("multi_news")
```
## Expected results
Should download and load Multi-News dataset.
## Actual results
Throws the following error and cannot load data successfully:
```
NonMatchingChecksumError: Checksums didn't match for dataset source files:
['https://drive.google.com/uc?export=download&id=1vRY2wM6rlOZrf9exGTm5pXj5ExlVwJ0C']
```
Could this issue please be looked at? Thanks! | {
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https://api.github.com/repos/huggingface/datasets/issues/3729 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3729/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3729/comments | https://api.github.com/repos/huggingface/datasets/issues/3729/events | https://github.com/huggingface/datasets/issues/3729 | 1,139,398,442 | I_kwDODunzps5D6dcq | 3,729 | Wrong number of examples when loading a text dataset | {
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"Hi @kg-nlp, thanks for reporting.\r\n\r\nThat is weird... I guess we would need some sample data file where this behavior appears to reproduce the bug for further investigation... ",
"ok, I found the reason why that two results are not same.\r\nthere is /u2029 in the text, the datasets will split sentence accord... | 1,644,974,011,000 | 1,647,360,969,000 | 1,647,360,969,000 | NONE | null | null | null | ## Describe the bug
when I use load_dataset to read a txt file I find that the number of the samples is incorrect
## Steps to reproduce the bug
```
fr = open('train.txt','r',encoding='utf-8').readlines()
print(len(fr)) # 1199637
datasets = load_dataset('text', data_files={'train': ['train.txt']}, streaming=False)
print(len(datasets['train'])) # 1199649
```
I also use command line operation to verify it
```
$ wc -l train.txt
1199637 train.txt
```
## Expected results
please fix that issue
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.8.3
- Platform:windows&linux
- Python version:3.7
- PyArrow version:6.0.1
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https://api.github.com/repos/huggingface/datasets/issues/3728 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3728/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3728/comments | https://api.github.com/repos/huggingface/datasets/issues/3728/events | https://github.com/huggingface/datasets/issues/3728 | 1,139,303,614 | I_kwDODunzps5D6GS- | 3,728 | VoxPopuli | {
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"duplicate of https://github.com/huggingface/datasets/issues/2300"
] | 1,644,966,295,000 | 1,645,037,352,000 | 1,645,037,352,000 | MEMBER | null | null | null | ## Adding a Dataset
- **Name:** VoxPopuli
- **Description:** A Large-Scale Multilingual Speech Corpus
- **Paper:** https://arxiv.org/pdf/2101.00390.pdf
- **Data:** https://github.com/facebookresearch/voxpopuli
- **Motivation:** one of the largest (if not the largest) multilingual speech corpus: 400K hours of multilingual unlabeled speech + 17k hours of labeled speech
Instructions to add a new dataset can be found [here](https://github.com/huggingface/datasets/blob/master/ADD_NEW_DATASET.md).
👀 @kahne @Molugan
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https://api.github.com/repos/huggingface/datasets/issues/3727 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3727/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3727/comments | https://api.github.com/repos/huggingface/datasets/issues/3727/events | https://github.com/huggingface/datasets/pull/3727 | 1,138,979,732 | PR_kwDODunzps4y34JN | 3,727 | Patch all module attributes in its namespace | {
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} | When patching module attributes, only those defined in its `__all__` variable were considered by default (only falling back to `__dict__` if `__all__` was None).
However those are only a subset of all the module attributes in its namespace (`__dict__` variable).
This PR fixes the problem of modules that have non-None `__all__` variable, but try to access an attribute present in `__dict__` (and not in `__all__`).
For example, `pandas` has attribute `__version__` only present in `__dict__`.
- Before version 1.4, pandas `__all__` was None, thus all attributes in `__dict__` were patched
- From version 1.4, pandas `__all__` is not None, thus attributes in `__dict__` not present in `__all__` are ignored
Fix #3724.
CC: @severo @lvwerra | {
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https://api.github.com/repos/huggingface/datasets/issues/3726 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3726/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3726/comments | https://api.github.com/repos/huggingface/datasets/issues/3726/events | https://github.com/huggingface/datasets/pull/3726 | 1,138,870,362 | PR_kwDODunzps4y3iSv | 3,726 | Use config pandas version in CSV dataset builder | {
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https://api.github.com/repos/huggingface/datasets/issues/3725 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3725/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3725/comments | https://api.github.com/repos/huggingface/datasets/issues/3725/events | https://github.com/huggingface/datasets/pull/3725 | 1,138,835,625 | PR_kwDODunzps4y3bOG | 3,725 | Pin pandas to avoid bug in streaming mode | {
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Related to #3724. | {
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https://api.github.com/repos/huggingface/datasets/issues/3724 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3724/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3724/comments | https://api.github.com/repos/huggingface/datasets/issues/3724/events | https://github.com/huggingface/datasets/issues/3724 | 1,138,827,681 | I_kwDODunzps5D4SGh | 3,724 | Bug while streaming CSV dataset with pandas 1.4 | {
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"followers_... | null | [] | 1,644,938,179,000 | 1,644,944,144,000 | 1,644,944,144,000 | MEMBER | null | null | null | ## Describe the bug
If we upgrade to pandas `1.4`, the patching of the pandas module is no longer working
```
AttributeError: '_PatchedModuleObj' object has no attribute '__version__'
```
## Steps to reproduce the bug
```
pip install pandas==1.4
```
```python
from datasets import load_dataset
ds = load_dataset("lvwerra/red-wine", split="train", streaming=True)
item = next(iter(ds))
item
```
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https://api.github.com/repos/huggingface/datasets/issues/3723 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3723/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3723/comments | https://api.github.com/repos/huggingface/datasets/issues/3723/events | https://github.com/huggingface/datasets/pull/3723 | 1,138,789,493 | PR_kwDODunzps4y3RuI | 3,723 | Fix flatten of complex feature types | {
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"Apparently the merge brought back some tests that use `flatten_()` that we removed recently",
"_The documentation is not available anymore as the PR was closed or merged._"
] | 1,644,936,333,000 | 1,647,624,746,000 | 1,647,624,494,000 | CONTRIBUTOR | null | false | {
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} | Fix `flatten` for the following feature types: Image/Audio, Translation, and TranslationVariableLanguages.
Inspired by `cast`/`table_cast`, I've introduced a `table_flatten` function to handle the Image/Audio types.
CC: @SBrandeis
Fix #3686.
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https://api.github.com/repos/huggingface/datasets/issues/3722 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3722/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3722/comments | https://api.github.com/repos/huggingface/datasets/issues/3722/events | https://github.com/huggingface/datasets/pull/3722 | 1,138,770,211 | PR_kwDODunzps4y3NrP | 3,722 | added electricity load diagram dataset | {
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https://api.github.com/repos/huggingface/datasets/issues/3721 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3721/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3721/comments | https://api.github.com/repos/huggingface/datasets/issues/3721/events | https://github.com/huggingface/datasets/pull/3721 | 1,137,617,108 | PR_kwDODunzps4yzXCd | 3,721 | Multi-GPU support for `FaissIndex` | {
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"Any love?",
"Hi, any update?",
"@albertvillanova Sorry for bothering you again, quick follow up: is there anything else you want me to add / modify?",
"Hi @rentruewang , we updated the documentation on `master`, could you merge `master` into your branch please ?",
"@lhoestq I've merge `huggingface/datasets... | 1,644,859,611,000 | 1,646,670,537,000 | 1,646,670,536,000 | CONTRIBUTOR | null | false | {
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} | Per #3716 , current implementation does not take into consideration that `faiss` can run on multiple GPUs.
In this commit, I provided multi-GPU support for `FaissIndex` by modifying the device management in `IndexableMixin.add_faiss_index` and `FaissIndex.load`.
Now users are able to pass in
1. a positive integer (as usual) to use 1 GPU
2. a negative integer `-1` to use all GPUs
3. a list of integers e.g. `[0, 1]` to run only on those GPUs
4. Of course, passing in nothing still runs on CPU.
This closes: #3716 | {
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https://api.github.com/repos/huggingface/datasets/issues/3720 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3720/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3720/comments | https://api.github.com/repos/huggingface/datasets/issues/3720/events | https://github.com/huggingface/datasets/issues/3720 | 1,137,537,080 | I_kwDODunzps5DzXA4 | 3,720 | Builder Configuration Update Required on Common Voice Dataset | {
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"Hi @aasem, thanks for reporting.\r\n\r\nPlease note that currently Commom Voice is hosted on our Hub as a community dataset by the Mozilla Foundation. See all Common Voice versions here: https://huggingface.co/mozilla-foundation\r\n\r\nMaybe we should add an explaining note in our \"legacy\" Common Voice canonical... | 1,644,855,701,000 | 1,644,935,487,000 | null | NONE | null | null | null | Missing language in Common Voice dataset
**Link:** https://huggingface.co/datasets/common_voice
I tried to call the Urdu dataset using `load_dataset("common_voice", "ur", split="train+validation")` but couldn't due to builder configuration not found. I checked the source file here for the languages support:
https://github.com/huggingface/datasets/blob/master/datasets/common_voice/common_voice.py
and Urdu isn't included there. I assume a quick update will fix the issue as Urdu speech is now available at the Common Voice dataset.
Am I the one who added this dataset? No
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Instead of reusing `_check_valid_index_key` from `datasets.formatting`, I defined a new function to provide a more meaningful error message.
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} | This PR:
- fixes a bug in the script, by removing an unnamed column with the row index: fix KeyError
- fix the metadata JSON, by adding both configurations (1.1 and 2.0): fix ExpectedMoreDownloadedFiles
- updates the dataset card
Fix #3515. | {
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https://api.github.com/repos/huggingface/datasets/issues/3717 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3717/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3717/comments | https://api.github.com/repos/huggingface/datasets/issues/3717/events | https://github.com/huggingface/datasets/issues/3717 | 1,137,183,015 | I_kwDODunzps5DyAkn | 3,717 | wrong condition in `Features ClassLabel encode_example` | {
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"Hi @Tudyx, \r\n\r\nPlease note that in Python, the boolean NOT operator (`not`) has lower precedence than comparison operators (`<=`, `<`), thus the expression you mention is equivalent to:\r\n```python\r\n not (-1 <= example_data < self.num_classes)\r\n```\r\n\r\nAlso note that as expected, the exception is raise... | 1,644,839,075,000 | 1,644,851,376,000 | 1,644,851,263,000 | NONE | null | null | null | ## Describe the bug
The `encode_example` function in *features.py* seems to have a wrong condition.
```python
if not -1 <= example_data < self.num_classes:
raise ValueError(f"Class label {example_data:d} greater than configured num_classes {self.num_classes}")
```
## Expected results
The `not - 1` condition change the result of the condition. For instance, if `example_data` equals 4 and ` self.num_classes` equals 4 too, `example_data < self.num_classes` will give `False` as expected . But if i add the `not - 1` condition, `not -1 <= example_data < self.num_classes` will give `True` and raise an exception.
## Environment info
- `datasets` version: 1.18.3
- Python version: 3.8.10
- PyArrow version: 7.00
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https://api.github.com/repos/huggingface/datasets/issues/3716 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3716/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3716/comments | https://api.github.com/repos/huggingface/datasets/issues/3716/events | https://github.com/huggingface/datasets/issues/3716 | 1,136,831,092 | I_kwDODunzps5Dwqp0 | 3,716 | `FaissIndex` to support multiple GPU and `custom_index` | {
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"Hi @rentruewang, thansk for reporting and for your PR!!! We should definitely support this. ",
"@albertvillanova Great! :)"
] | 1,644,819,703,000 | 1,646,670,536,000 | 1,646,670,536,000 | CONTRIBUTOR | null | null | null | **Is your feature request related to a problem? Please describe.**
Currently, because `device` is of the type `int | None`, to leverage `faiss-gpu`'s multi-gpu support, you need to create a `custom_index`. However, if using a `custom_index` created by e.g. `faiss.index_cpu_to_all_gpus`, then `FaissIndex.save` does not work properly because it checks the device id (which is an int, so no multiple GPUs).
**Describe the solution you'd like**
I would like `FaissIndex` to support multiple GPUs, by passing in a list to `add_faiss_index`.
**Describe alternatives you've considered**
Alternatively, I would like it to at least provide a warning cause it wasn't the behavior that I expected.
**Additional context**
Relavent source code here:
https://github.com/huggingface/datasets/blob/6ed6ac9448311930557810383d2cfd4fe6aae269/src/datasets/search.py#L340-L349
Device management needs changing to support multiple GPUs, probably by `isinstance` calls.
I can provide a PR if you like :)
Thanks for reading!
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"It shows below when I run test:\r\n\r\nFAILED tests/test_dataset_common.py::LocalDatasetTest::test_load_dataset_all_configs_msr_sqa - ValueError: Unknown split \"validation\". Should be one of ['train', 'test'].\r\n\r\nIt make no sense for me😂. \r\n",
"@albertvillanova Does this PR has some additional fixes com... | 1,644,770,250,000 | 1,647,257,467,000 | null | NONE | null | false | {
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} | The last version has many problems,
1) Errors in table load-in. Split by a single comma instead of using pandas is wrong.
2) id reduplicated in _generate_examples function.
3) Missing information of history questions which make it hard to use.
I fix it refer to https://github.com/HKUNLP/UnifiedSKG. And we test it to perform normally. | {
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https://api.github.com/repos/huggingface/datasets/issues/3714 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3714/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3714/comments | https://api.github.com/repos/huggingface/datasets/issues/3714/events | https://github.com/huggingface/datasets/issues/3714 | 1,136,105,530 | I_kwDODunzps5Dt5g6 | 3,714 | tatoeba_mt: File not found error and key error | {
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"Looks like I solved my problems ..."
] | 1,644,770,145,000 | 1,644,785,044,000 | 1,644,785,044,000 | NONE | null | null | null | ## Dataset viewer issue for 'tatoeba_mt'
**Link:** https://huggingface.co/datasets/Helsinki-NLP/tatoeba_mt
My data loader script does not seem to work.
The files are part of the local repository but cannot be found. An example where it should work is the subset for "afr-eng".
Another problem is that I do not have validation data for all subsets and I don't know how to properly check whether validation exists in the configuration before I try to download it. An example is the subset for "afr-deu".
Am I the one who added this dataset ? Yes
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https://api.github.com/repos/huggingface/datasets/issues/3713 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3713/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3713/comments | https://api.github.com/repos/huggingface/datasets/issues/3713/events | https://github.com/huggingface/datasets/pull/3713 | 1,135,692,572 | PR_kwDODunzps4yso6D | 3,713 | Rm sphinx doc | {
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"Thanks for pushing this :)\r\nOne minor comment regarding the PR itself - I noticed that some changes are coming from the upstream master, this might be due to a rebase. Would be nice if this PR doesn't include them for readabily, feel free to open a new one if necessary",
"Closing in favour https://github.com/h... | 1,644,751,591,000 | 1,645,093,126,000 | 1,645,092,729,000 | CONTRIBUTOR | null | false | {
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} | Checklist
- [x] Update circle ci yaml
- [x] Delete sphinx static & python files in docs dir
- [x] Update readme in docs dir
- [ ] Update docs config in setup.py | {
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https://api.github.com/repos/huggingface/datasets/issues/3710 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3710/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3710/comments | https://api.github.com/repos/huggingface/datasets/issues/3710/events | https://github.com/huggingface/datasets/pull/3710 | 1,133,955,393 | PR_kwDODunzps4ymQMQ | 3,710 | Fix CI code quality issue | {
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https://api.github.com/repos/huggingface/datasets/issues/3709 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3709/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3709/comments | https://api.github.com/repos/huggingface/datasets/issues/3709/events | https://github.com/huggingface/datasets/pull/3709 | 1,132,997,904 | PR_kwDODunzps4yi0J4 | 3,709 | Set base path to hub url for canonical datasets | {
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"If we agree to have data files in a dedicated directory \"data/\" then we should be fine. You're right we should not try to edit a dataset script from the repository directly, but from github, in order to avoid conflicts"
] | 1,644,607,400,000 | 1,645,020,148,000 | 1,645,020,147,000 | MEMBER | null | false | {
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} | This should allow canonical datasets to use relative paths to download data files from the Hub
cc @polinaeterna this will be useful if we have audio datasets that are canonical and for which you'd like to host data files | {
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https://api.github.com/repos/huggingface/datasets/issues/3708 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3708/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3708/comments | https://api.github.com/repos/huggingface/datasets/issues/3708/events | https://github.com/huggingface/datasets/issues/3708 | 1,132,968,402 | I_kwDODunzps5Dh7nS | 3,708 | Loading JSON gets stuck with many workers/threads | {
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"Hi ! Note that it does `block_size *= 2` until `block_size > len(batch)`, so it doesn't loop indefinitely. What do you mean by \"get stuck indefinitely\" then ? Is this the actual call to `paj.read_json` that hangs ?\r\n\r\n> increasing the `chunksize` argument decreases the chance of getting stuck\r\n\r\nCould yo... | 1,644,605,448,000 | 1,644,613,073,000 | null | MEMBER | null | null | null | ## Describe the bug
Loading a JSON dataset with `load_dataset` can get stuck when running on a machine with many CPUs. This is especially an issue when loading a large dataset on a large machine.
## Steps to reproduce the bug
I originally created the following script to reproduce the issue:
```python
from datasets import load_dataset
from multiprocessing import Process
from tqdm import tqdm
import datasets
from transformers import set_seed
def run_tasks_in_parallel(tasks, ds_list):
for _ in tqdm(range(1000)):
print('new batch')
running_tasks = [Process(target=task, args=(ds, i)) for i, (task, ds) in enumerate(zip(tasks, ds_list))]
for running_task in running_tasks:
running_task.start()
for running_task in running_tasks:
running_task.join()
def get_dataset():
dataset_name = 'transformersbook/codeparrot'
ds = load_dataset(dataset_name+'-train', split="train", streaming=True)
ds = ds.shuffle(buffer_size=1000, seed=1)
return iter(ds)
def get_next_element(ds, process_id, N=10000):
for _ in range(N):
_ = next(ds)['content']
print(f'process {process_id} done')
return
set_seed(1)
datasets.utils.logging.set_verbosity_debug()
n_processes = 8
tasks = [get_next_element for _ in range(n_processes)]
args = [get_dataset() for _ in range(n_processes)]
run_tasks_in_parallel(tasks, args)
```
Today I noticed that it can happen when running it on a single process on a machine with many cores without streaming. So just `load_dataset("transformersbook/codeparrot-train")` alone might cause the issue after waiting long enough or trying many times. It's a slightly random process which makes it especially hard to track down. When I encountered it today it had already processed 17GB of data (the size of the cache folder when it got stuck) before getting stuck.
Here's my current understanding of the error. As far as I can tell it happens in the following block: https://github.com/huggingface/datasets/blob/be701e9e89ab38022612c7263edc015bc7feaff9/src/datasets/packaged_modules/json/json.py#L119-L139
When the try on line 121 fails and the `block_size` is increased it can happen that it can't read the JSON again and gets stuck indefinitely. A hint that points in that direction is that increasing the `chunksize` argument decreases the chance of getting stuck and vice versa. Maybe it is an issue with a lock on the file that is not properly released.
## Expected results
Read a JSON before the end of the universe.
## Actual results
Read a JSON not before the end of the universe.
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 1.18.3
- Platform: Linux-4.19.0-18-cloud-amd64-x86_64-with-glibc2.28
- Python version: 3.9.10
- PyArrow version: 7.0.0
@lhoestq we dicsussed this a while ago. @albertvillanova we discussed this today :)
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https://api.github.com/repos/huggingface/datasets/issues/3707 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3707/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3707/comments | https://api.github.com/repos/huggingface/datasets/issues/3707/events | https://github.com/huggingface/datasets/issues/3707 | 1,132,741,903 | I_kwDODunzps5DhEUP | 3,707 | `.select`: unexpected behavior with `indices` | {
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"Hi! Currently, we compute the final index as `index % len(dset)`. I agree this behavior is somewhat unexpected and that it would be more appropriate to raise an error instead (this is what `df.iloc` in Pandas does, for instance).\r\n\r\n@albertvillanova @lhoestq wdyt?",
"I agree. I think `index % len(dset)` was ... | 1,644,592,801,000 | 1,644,866,361,000 | 1,644,866,361,000 | NONE | null | null | null | ## Describe the bug
The `.select` method will not throw when sending `indices` bigger than the dataset length; `indices` will be wrapped instead. This behavior is not documented anywhere, and is not intuitive.
## Steps to reproduce the bug
```python
from datasets import Dataset
ds = Dataset.from_dict({"text": ["d", "e", "f"], "label": [4, 5, 6]})
res1 = ds.select([1, 2, 3])['text']
res2 = ds.select([1000])['text']
```
## Expected results
Both results should throw an `Error`.
## Actual results
`res1` will give `['e', 'f', 'd']`
`res2` will give `['e']`
## Environment info
Bug found from this environment:
- `datasets` version: 1.16.1
- Platform: macOS-10.16-x86_64-i386-64bit
- Python version: 3.8.7
- PyArrow version: 6.0.1
It was also replicated on `master`.
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https://api.github.com/repos/huggingface/datasets/issues/3706 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3706/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3706/comments | https://api.github.com/repos/huggingface/datasets/issues/3706/events | https://github.com/huggingface/datasets/issues/3706 | 1,132,218,874 | I_kwDODunzps5DfEn6 | 3,706 | Unable to load dataset 'big_patent' | {
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"Hi @ankitk2109,\r\n\r\nHave you tried passing the split name with the keyword `split=`? See e.g. an example in our Quick Start docs: https://huggingface.co/docs/datasets/quickstart.html#load-the-dataset-and-model\r\n```python\r\n ds = load_dataset(\"big_patent\", \"d\", split=\"validation\")",
"Hi @albertvillano... | 1,644,572,914,000 | 1,644,852,363,000 | 1,644,852,363,000 | NONE | null | null | null | ## Describe the bug
Unable to load the "big_patent" dataset
## Steps to reproduce the bug
```python
load_dataset('big_patent', 'd', 'validation')
```
## Expected results
Download big_patents' validation split from the 'd' subset
## Getting an error saying:
{FileNotFoundError}Local file ..\huggingface\datasets\downloads\6159313604f4f2c01e7d1cac52139343b6c07f73f6de348d09be6213478455c5\bigPatentData\train.tar.gz doesn't exist
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version:1.18.3
- Platform: Windows
- Python version:3.8
- PyArrow version:7.0.0
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https://api.github.com/repos/huggingface/datasets/issues/3705 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3705/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3705/comments | https://api.github.com/repos/huggingface/datasets/issues/3705/events | https://github.com/huggingface/datasets/pull/3705 | 1,132,053,226 | PR_kwDODunzps4yfhyj | 3,705 | Raise informative error when loading a save_to_disk dataset | {
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} | People recurrently report error when trying to load a dataset (using `load_dataset`) that was previously saved using `save_to_disk`.
This PR raises an informative error message telling them they should use `load_from_disk` instead.
Close #3700. | {
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https://api.github.com/repos/huggingface/datasets/issues/3704 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3704/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3704/comments | https://api.github.com/repos/huggingface/datasets/issues/3704/events | https://github.com/huggingface/datasets/issues/3704 | 1,132,042,631 | I_kwDODunzps5DeZmH | 3,704 | OSCAR-2109 datasets are misaligned and truncated | {
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"Hi @adrianeboyd, thanks for reporting.\r\n\r\nThere is indeed a bug in that community dataset:\r\nLine:\r\n```python\r\nmetadata_and_text_files = list(zip(metadata_files, text_files))\r\n``` \r\nshould be replaced with\r\n```python\r\nmetadata_and_text_files = list(zip(sorted(metadata_files), sorted(text_files)))\... | 1,644,567,299,000 | 1,647,540,064,000 | 1,647,447,688,000 | NONE | null | null | null | ## Describe the bug
The `oscar-corpus/OSCAR-2109` data appears to be misaligned and truncated by the dataset builder for subsets that contain more than one part and for cases where the texts contain non-unix newlines.
## Steps to reproduce the bug
A few examples, although I'm not sure how deterministic the particular (mis)alignment is in various configurations:
```python
from datasets import load_dataset
dataset = load_dataset("oscar-corpus/OSCAR-2109", "deduplicated_fi", split="train", use_auth_token=True)
entry = dataset[0]
# entry["text"] is from fi_part_3.txt.gz
# entry["meta"] is from fi_meta_part_2.jsonl.gz
dataset = load_dataset("oscar-corpus/OSCAR-2109", "deduplicated_no", split="train", use_auth_token=True)
entry = dataset[900000]
# entry["text"] is from no_part_3.txt.gz and contains a blank line
# entry["meta"] is from no_meta_part_1.jsonl.gz
dataset = load_dataset("oscar-corpus/OSCAR-2109", "deduplicated_mk", split="train", streaming=True, use_auth_token=True)
# 9088 texts in the dataset are empty
```
For `deduplicated_fi`, all exported raw texts from the dataset are 17GB rather than 20GB as reported in the data splits overview table. The token count with `wc -w` for the raw texts is 2,067,556,874 rather than the expected 2,357,264,196 from the data splits table.
For `deduplicated_no` all exported raw texts contain 624,040,887 rather than the expected 776,354,517 tokens.
For `deduplicated_mk` it is 122,236,936 rather than 134,544,934 tokens.
I'm not expecting the `wc -w` counts to line up exactly with the data splits table, but for comparison the `wc -w` count for `deduplicated_mk` on the raw texts is 134,545,424.
## Issues
* The meta / text files are not paired correctly when loading, so the extracted texts do not have the right offsets, the metadata is not associated with the correct text, and the text files may not be processed to the end or may be processed beyond the end (empty texts).
* The line count offset is not reset per file so the texts aren't aligned to the right offsets in any parts beyond the first part, leading to truncation when in effect blank lines are not skipped.
* Non-unix newline characters are treated as newlines when reading the text files while the metadata only counts unix newlines for its line offsets, leading to further misalignments between the metadata and the extracted texts, and which also results in truncation.
## Expected results
All texts from the OSCAR release are extracted according to the metadata and aligned with the correct metadata.
## Fixes
Not necessarily the exact fixes/checks you may want to use (I didn't test all languages or do any cross-platform testing, I'm not sure all the details are compatible with streaming), however to highlight the issues:
```diff
diff --git a/OSCAR-2109.py b/OSCAR-2109.py
index bbac1076..5eee8de7 100644
--- a/OSCAR-2109.py
+++ b/OSCAR-2109.py
@@ -20,6 +20,7 @@
import collections
import gzip
import json
+import os
import datasets
@@ -387,9 +388,20 @@ class Oscar2109(datasets.GeneratorBasedBuilder):
with open(checksum_file, encoding="utf-8") as f:
data_filenames = [line.split()[1] for line in f if line]
data_urls = [self.config.base_data_path + data_filename for data_filename in data_filenames]
- text_files = dl_manager.download([url for url in data_urls if url.endswith(".txt.gz")])
- metadata_files = dl_manager.download([url for url in data_urls if url.endswith(".jsonl.gz")])
+ # sort filenames so corresponding parts are aligned
+ text_files = sorted(dl_manager.download([url for url in data_urls if url.endswith(".txt.gz")]))
+ metadata_files = sorted(dl_manager.download([url for url in data_urls if url.endswith(".jsonl.gz")]))
+ assert len(text_files) == len(metadata_files)
metadata_and_text_files = list(zip(metadata_files, text_files))
+ for meta_path, text_path in metadata_and_text_files:
+ # check that meta/text part numbers are the same
+ if "part" in os.path.basename(text_path):
+ assert (
+ os.path.basename(text_path).replace(".txt.gz", "").split("_")[-1]
+ == os.path.basename(meta_path).replace(".jsonl.gz", "").split("_")[-1]
+ )
+ else:
+ assert len(metadata_and_text_files) == 1
return [
datasets.SplitGenerator(name=datasets.Split.TRAIN, gen_kwargs={"metadata_and_text_files": metadata_and_text_files}),
]
@@ -397,10 +409,14 @@ class Oscar2109(datasets.GeneratorBasedBuilder):
def _generate_examples(self, metadata_and_text_files):
"""This function returns the examples in the raw (text) form by iterating on all the files."""
id_ = 0
- offset = 0
for meta_path, text_path in metadata_and_text_files:
+ # line offsets are per text file
+ offset = 0
logger.info("generating examples from = %s", text_path)
- with gzip.open(open(text_path, "rb"), "rt", encoding="utf-8") as text_f:
+ # some texts contain non-Unix newlines that should not be
+ # interpreted as line breaks for the line counts in the metadata
+ # with readline()
+ with gzip.open(open(text_path, "rb"), "rt", encoding="utf-8", newline="\n") as text_f:
with gzip.open(open(meta_path, "rb"), "rt", encoding="utf-8") as meta_f:
for line in meta_f:
# read meta
@@ -411,7 +427,12 @@ class Oscar2109(datasets.GeneratorBasedBuilder):
offset += 1
text_f.readline()
# read text
- text = "".join([text_f.readline() for _ in range(meta["nb_sentences"])]).rstrip()
+ text_lines = [text_f.readline() for _ in range(meta["nb_sentences"])]
+ # all lines contain text (no blank lines or EOF)
+ assert all(text_lines)
+ assert "\n" not in text_lines
offset += meta["nb_sentences"]
+ # only strip the trailing newline
+ text = "".join(text_lines).rstrip("\n")
yield id_, {"id": id_, "text": text, "meta": meta}
id_ += 1
```
I've tested this with a number of smaller deduplicated languages with 1-20 parts and the resulting datasets looked correct in terms of word count and size when compared to the data splits table and raw texts, and the text/metadata alignments were correct in all my spot checks. However, there are many many languages I didn't test and I'm not sure that there aren't any texts containing blank lines in the corpus, for instance. For the cases I tested, the assertions related to blank lines and EOF made it easier to verify that the text and metadata were aligned as intended, since there would be little chance of spurious alignments of variable-length texts across so much data. | {
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https://api.github.com/repos/huggingface/datasets/issues/3703 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3703/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3703/comments | https://api.github.com/repos/huggingface/datasets/issues/3703/events | https://github.com/huggingface/datasets/issues/3703 | 1,131,882,772 | I_kwDODunzps5DdykU | 3,703 | ImportError: To be able to use this metric, you need to install the following dependencies['seqeval'] using 'pip install seqeval' for instance' | {
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"\r\nMy datasets version",
"\r\n",
"Hi! Some of our metrics require additional dependencies to w... | 1,644,561,522,000 | 1,647,867,205,000 | null | NONE | null | null | null | hi :
I want to use the seqeval indicator because of direct load_ When metric ('seqeval '), it will prompt that the network connection fails. So I downloaded the seqeval Py to load locally. Loading code: metric = load_ metric(path='mymetric/seqeval/seqeval.py')
But tips:
Traceback (most recent call last):
File "/home/ubuntu/Python3.6_project/zyf_project/transformers/examples/pytorch/token-classification/run_ner.py", line 604, in <module>
main()
File "/home/ubuntu/Python3.6_project/zyf_project/transformers/examples/pytorch/token-classification/run_ner.py", line 481, in main
metric = load_metric(path='mymetric/seqeval/seqeval.py')
File "/home/ubuntu/Python3.6_project/zyf_project/transformers_venv_0209/lib/python3.7/site-packages/datasets/load.py", line 610, in load_metric
dataset=False,
File "/home/ubuntu/Python3.6_project/zyf_project/transformers_venv_0209/lib/python3.7/site-packages/datasets/load.py", line 450, in prepare_module
f"To be able to use this {module_type}, you need to install the following dependencies"
ImportError: To be able to use this metric, you need to install the following dependencies['seqeval'] using 'pip install seqeval' for instance'
**What should I do? Please help me, thank you**
| {
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https://api.github.com/repos/huggingface/datasets/issues/3702 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3702/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3702/comments | https://api.github.com/repos/huggingface/datasets/issues/3702/events | https://github.com/huggingface/datasets/pull/3702 | 1,130,666,707 | PR_kwDODunzps4yahKc | 3,702 | Update the address to use https | {
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"Hi ! I'm getting some 503 from both the http and https addresses. Do you think we could host this data somewhere else ? (please check if there is a license and if it allows redistribution)"
] | 1,644,518,790,000 | 1,645,803,017,000 | null | NONE | null | false | {
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https://api.github.com/repos/huggingface/datasets/issues/3701 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3701/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3701/comments | https://api.github.com/repos/huggingface/datasets/issues/3701/events | https://github.com/huggingface/datasets/pull/3701 | 1,130,498,738 | PR_kwDODunzps4yZ8Dw | 3,701 | Pin ElasticSearch | {
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} | Until we manage to support ES 8.0, I'm setting the version to `<8.0.0`
Currently we're getting this error on 8.0:
```python
ValueError: Either 'hosts' or 'cloud_id' must be specified
```
When instantiating a `Elasticsearch()` object | {
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https://api.github.com/repos/huggingface/datasets/issues/3700 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3700/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3700/comments | https://api.github.com/repos/huggingface/datasets/issues/3700/events | https://github.com/huggingface/datasets/issues/3700 | 1,130,252,496 | I_kwDODunzps5DXkjQ | 3,700 | Unable to load a dataset | {
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"Hi! `load_dataset` is intended to be used to load a canonical dataset (`wikipedia`), a packaged dataset (`csv`, `json`, ...) or a dataset hosted on the Hub. For local datasets saved with `save_to_disk(\"path/to/dataset\")`, use `load_from_disk(\"path/to/dataset\")`.",
"Maybe we should raise an informative error ... | 1,644,505,553,000 | 1,644,620,199,000 | 1,644,620,199,000 | NONE | null | null | null | ## Describe the bug
Unable to load a dataset from Huggingface that I have just saved.
## Steps to reproduce the bug
On Google colab
`! pip install datasets `
`from datasets import load_dataset`
`my_path = "wiki_dataset"`
`dataset = load_dataset('wikipedia', "20200501.fr")`
`dataset.save_to_disk(my_path)`
`dataset = load_dataset(my_path)`
## Expected results
Loading the dataset
## Actual results
ValueError: Couldn't cast
_data_files: list<item: struct<filename: string>>
child 0, item: struct<filename: string>
child 0, filename: string
_fingerprint: string
_format_columns: null
_format_kwargs: struct<>
_format_type: null
_indexes: struct<>
_output_all_columns: bool
_split: string
to
{'builder_name': Value(dtype='string', id=None), 'citation': Value(dtype='string', id=None), 'config_name': Value(dtype='string', id=None), 'dataset_size': Value(dtype='int64', id=None), 'description': Value(dtype='string', id=None), 'download_checksums': {}, 'download_size': Value(dtype='int64', id=None), 'features': {'title': {'dtype': Value(dtype='string', id=None), 'id': Value(dtype='null', id=None), '_type': Value(dtype='string', id=None)}, 'text': {'dtype': Value(dtype='string', id=None), 'id': Value(dtype='null', id=None), '_type': Value(dtype='string', id=None)}}, 'homepage': Value(dtype='string', id=None), 'license': Value(dtype='string', id=None), 'post_processed': Value(dtype='null', id=None), 'post_processing_size': Value(dtype='null', id=None), 'size_in_bytes': Value(dtype='int64', id=None), 'splits': {'train': {'name': Value(dtype='string', id=None), 'num_bytes': Value(dtype='int64', id=None), 'num_examples': Value(dtype='int64', id=None), 'dataset_name': Value(dtype='string', id=None)}}, 'supervised_keys': Value(dtype='null', id=None), 'task_templates': Value(dtype='null', id=None), 'version': {'version_str': Value(dtype='string', id=None), 'description': Value(dtype='string', id=None), 'major': Value(dtype='int64', id=None), 'minor': Value(dtype='int64', id=None), 'patch': Value(dtype='int64', id=None)}}
because column names don't match
## Environment info
- `datasets` version: 1.18.3
- Platform: Linux-5.4.144+-x86_64-with-Ubuntu-18.04-bionic
- Python version: 3.7.12
- PyArrow version: 6.0.1
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https://api.github.com/repos/huggingface/datasets/issues/3699 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3699/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3699/comments | https://api.github.com/repos/huggingface/datasets/issues/3699/events | https://github.com/huggingface/datasets/pull/3699 | 1,130,200,593 | PR_kwDODunzps4yY49I | 3,699 | Add dev-only config to Natural Questions dataset | {
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"Great thanks ! I think we can fix the CI by copying the NQ folder on gcs to 0.0.3. Does that sound good ?",
"I've copied the 0.0.2 folder content to 0.0.3, as suggested.\r\n\r\nI'm updating the dataset card..."
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Fix #413. | {
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https://api.github.com/repos/huggingface/datasets/issues/3698 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3698/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3698/comments | https://api.github.com/repos/huggingface/datasets/issues/3698/events | https://github.com/huggingface/datasets/pull/3698 | 1,129,864,282 | PR_kwDODunzps4yXtyQ | 3,698 | Add finetune-data CodeFill | {
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https://api.github.com/repos/huggingface/datasets/issues/3697 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3697/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3697/comments | https://api.github.com/repos/huggingface/datasets/issues/3697/events | https://github.com/huggingface/datasets/pull/3697 | 1,129,795,724 | PR_kwDODunzps4yXeXo | 3,697 | Add code-fill datasets for pretraining/finetuning/evaluating | {
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"Hi ! Thanks for adding this dataset :)\r\n\r\nIt looks like your PR contains many changes in files that are unrelated to your changes, I think it might come from running `make style` with an outdated version of `black`. Could you try opening a new PR that only contains your additions ? (or force push to this PR)"
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https://api.github.com/repos/huggingface/datasets/issues/3696 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3696/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3696/comments | https://api.github.com/repos/huggingface/datasets/issues/3696/events | https://github.com/huggingface/datasets/pull/3696 | 1,129,764,534 | PR_kwDODunzps4yXXgH | 3,696 | Force unique keys in newsqa dataset | {
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Fix #3630. | {
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} | Currently, `names_file` is a field of the data class `ClassLabel`, thus appearing when transforming it to dict (when saving infos). Afterwards, when trying to read it from infos, it conflicts with the other field `names`.
This PR, removes `names_file` as a field of the data class `ClassLabel`.
- it is only used at instantiation to generate the `labels` field
Fix #3631. | {
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https://api.github.com/repos/huggingface/datasets/issues/3693 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3693/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3693/comments | https://api.github.com/repos/huggingface/datasets/issues/3693/events | https://github.com/huggingface/datasets/pull/3693 | 1,128,554,365 | PR_kwDODunzps4yTTcQ | 3,693 | Standardize to `Example::` | {
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"Closing because https://github.com/huggingface/datasets/pull/3690/commits/ee0e0935d6105c1390b0e14a7622fbaad3044dbb"
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https://api.github.com/repos/huggingface/datasets/issues/3692 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3692/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3692/comments | https://api.github.com/repos/huggingface/datasets/issues/3692/events | https://github.com/huggingface/datasets/pull/3692 | 1,128,320,004 | PR_kwDODunzps4yShiu | 3,692 | Update data URL in pubmed dataset | {
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"- I updated the previous dummy data: I just had to rename the file and its directory\r\n - the dummy data zip contains only a single file: `pubmed22n0001.xml.gz`\r\n\r\nThen I discover it fails: https://app.circleci.com/pipelines/github/huggingface/datasets/9800/workflows/173a4433-8feb-4fc6-ab9e-59762084e3e1/jobs... | 1,644,401,181,000 | 1,644,848,142,000 | 1,644,848,141,000 | MEMBER | null | false | {
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https://api.github.com/repos/huggingface/datasets/issues/3691 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3691/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3691/comments | https://api.github.com/repos/huggingface/datasets/issues/3691/events | https://github.com/huggingface/datasets/pull/3691 | 1,127,629,306 | PR_kwDODunzps4yQThV | 3,691 | Upgrade black to version ~=22.0 | {
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https://api.github.com/repos/huggingface/datasets/issues/3690 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3690/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3690/comments | https://api.github.com/repos/huggingface/datasets/issues/3690/events | https://github.com/huggingface/datasets/pull/3690 | 1,127,493,538 | PR_kwDODunzps4yP2p5 | 3,690 | Update docs to new frontend/UI | {
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"We can have the docstrings of the properties that are missing docstrings (from discussion [here](https://github.com/huggingface/doc-builder/pull/96)) here by using your new `inject_arrow_table_documentation` onthem as well ?",
"@sgugger & @lhoestq could you help me with what should the `docs` section in setup.py... | 1,644,338,289,000 | 1,646,337,861,000 | 1,646,337,860,000 | CONTRIBUTOR | null | false | {
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} | ### TLDR: Update `datasets` `docs` to the new syntax (markdown and mdx files) & frontend (as how it looks on [hf.co/transformers](https://huggingface.co/docs/transformers/index))
| Light mode | Dark mode |
|-----------------------------------------------------------------------------------------------------|--------------------------------------------------------------------------------|
| <img width="400" alt="Screenshot 2022-02-17 at 14 15 34" src="https://user-images.githubusercontent.com/11827707/154489358-e2fb3708-8d72-4fb6-93f0-51d4880321c0.png"> | <img width="400" alt="Screenshot 2022-02-17 at 14 16 27" src="https://user-images.githubusercontent.com/11827707/154489596-c5a1311b-181c-4341-adb3-d60a7d3abe85.png"> |
## Checklist
- [x] update datasets docs to new syntax (should call `doc-builder convert`) (this PR)
- [x] discuss `@property` methods frontend https://github.com/huggingface/doc-builder/pull/87
- [x] discuss `inject_arrow_table_documentation` (this PR) https://github.com/huggingface/datasets/pull/3690#discussion_r801847860
- [x] update datasets docs path on moon-landing https://github.com/huggingface/moon-landing/pull/2089
- [x] convert pyarrow docstring from Numpydoc style to groups style https://github.com/huggingface/doc-builder/pull/89(https://stackoverflow.com/a/24385103/6558628)
- [x] handle `Raises` section on frontend and doc-builder https://github.com/huggingface/doc-builder/pull/86
- [x] check imgs path (this PR) (nothing to update here)
- [x] doc exaples block has to follow format `Examples::` https://github.com/huggingface/datasets/pull/3693
- [x] fix [this docstring](https://github.com/huggingface/datasets/blob/6ed6ac9448311930557810383d2cfd4fe6aae269/src/datasets/arrow_dataset.py#L3339) (causing svelte compilation error)
- [x] Delete sphinx related files
- [x] Delete sphinx CI
- [x] Update docs config in setup.py
- [x] add `versions.yml` in doc-build https://github.com/huggingface/doc-build/pull/1
- [x] add `versions.yml` in doc-build-dev https://github.com/huggingface/doc-build-dev/pull/1
- [x] https://github.com/huggingface/moon-landing/pull/2089
- [x] format docstrings for example `datasets.DatasetBuilder.download_and_prepare` args format look wrong
- [x] create new github actions. (can probably be in a separate PR) (see the transformers equivalents below)
1. [build_dev_documentation.yml](https://github.com/huggingface/transformers/blob/master/.github/workflows/build_dev_documentation.yml)
2. [build_documentation.yml](https://github.com/huggingface/transformers/blob/master/.github/workflows/build_documentation.yml)
3. [delete_dev_documentation.yml](https://github.com/huggingface/transformers/blob/master/.github/workflows/delete_dev_documentation.yml)
## Note to reviewers
The number of changed files is a lot (100+) because I've converted all `.rst` files to `.mdx` files & they are compiling fine on the svelte side (also, moved all the imgs to to [doc-imgs repo](https://huggingface.co/datasets/huggingface/documentation-images/tree/main/datasets)). Moreover, you should just review them on preprod and see if the rendering look fine.
_Therefore, I'd suggest to focus on the changed_ **`.py`** and **CI files** (github workflows, etc. you can use [this filter here](https://github.com/huggingface/datasets/pull/3690/files?file-filters%5B%5D=.py&file-filters%5B%5D=.yml&show-deleted-files=true&show-viewed-files=true)) during the review & ignore `.mdx` files. (if there's a bug in `.mdx` files, we can always handle it in a separate PR afterwards). | {
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https://api.github.com/repos/huggingface/datasets/issues/3689 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3689/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3689/comments | https://api.github.com/repos/huggingface/datasets/issues/3689/events | https://github.com/huggingface/datasets/pull/3689 | 1,127,422,478 | PR_kwDODunzps4yPnp7 | 3,689 | Fix streaming for servers not supporting HTTP range requests | {
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"Does it mean that huge files might end up being downloaded? It would go against the purpose of streaming, I think. At least, this fallback should be an option that could be disabled",
"Yes, it is against the purpose of streaming, but streaming is not possible if the server does not allow HTTP range requests.\n\n... | 1,644,334,865,000 | 1,644,511,885,000 | 1,644,511,885,000 | MEMBER | null | false | {
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} | Some servers do not support HTTP range requests, whereas this is required to stream some file formats (like ZIP).
~~This PR implements a workaround for those cases, by download the files locally in a temporary directory (cleaned up by the OS once the process is finished).~~
This PR raises custom error explaining that streaming is not possible because data host server does not support HTTP range requests.
Fix #3677. | {
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https://api.github.com/repos/huggingface/datasets/issues/3688 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3688/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3688/comments | https://api.github.com/repos/huggingface/datasets/issues/3688/events | https://github.com/huggingface/datasets/issues/3688 | 1,127,218,321 | I_kwDODunzps5DL_yR | 3,688 | Pyarrow version error | {
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"Hi @Zaker237, thanks for reporting.\r\n\r\nThis is weird: the error you get is only thrown if the installed pyarrow version is less than 3.0.0.\r\n\r\nCould you please check that you install pyarrow in the same Python virtual environment where you installed datasets?\r\n\r\nFrom the Python command line (or termina... | 1,644,324,839,000 | 1,644,388,533,000 | 1,644,388,532,000 | NONE | null | null | null | ## Describe the bug
I installed datasets(version 1.17.0, 1.18.0, 1.18.3) but i'm right now nor able to import it because of pyarrow. when i try to import it, i get the following error:
`To use datasets, the module pyarrow>=3.0.0 is required, and the current version of pyarrow doesn't match this condition`.
i tryed with all version of pyarrow execpt `4.0.0` but still get the same error.
## Steps to reproduce the bug
```python
import datasets
```
## Expected results
A clear and concise description of the expected results.
## Actual results
AttributeError Traceback (most recent call last)
<ipython-input-19-652e886d387f> in <module>
----> 1 import datasets
~\AppData\Local\Continuum\anaconda3\lib\site-packages\datasets\__init__.py in <module>
26
27
---> 28 if _version.parse(pyarrow.__version__).major < 3:
29 raise ImportWarning(
30 "To use `datasets`, the module `pyarrow>=3.0.0` is required, and the current version of `pyarrow` doesn't match this condition.\n"
AttributeError: 'Version' object has no attribute 'major'
## Environment info
Traceback (most recent call last):
File "c:\users\alex\appdata\local\continuum\anaconda3\lib\runpy.py", line 193, in _run_module_as_main
"__main__", mod_spec)
File "c:\users\alex\appdata\local\continuum\anaconda3\lib\runpy.py", line 85, in _run_code
exec(code, run_globals)
File "C:\Users\Alex\AppData\Local\Continuum\anaconda3\Scripts\datasets-cli.exe\__main__.py", line 5, in <module>
File "c:\users\alex\appdata\local\continuum\anaconda3\lib\site-packages\datasets\__init__.py", line 28, in <module>
if _version.parse(pyarrow.__version__).major < 3:
AttributeError: 'Version' object has no attribute 'major'
- `datasets` version:
- Platform: Linux(Ubuntu) and Windows: conda on the both
- Python version: 3.7
- PyArrow version: 7.0.0
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https://api.github.com/repos/huggingface/datasets/issues/3687 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3687/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3687/comments | https://api.github.com/repos/huggingface/datasets/issues/3687/events | https://github.com/huggingface/datasets/issues/3687 | 1,127,154,766 | I_kwDODunzps5DLwRO | 3,687 | Can't get the text data when calling to_tf_dataset | {
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"cc @Rocketknight1 ",
"You are correct that `to_tf_dataset` only handles numerical columns right now, yes, though this is a limitation we might remove in future! The main reason we do this is that our models mostly do not include the tokenizer as a model layer, because it's very difficult to compile some of them ... | 1,644,321,130,000 | 1,644,764,875,000 | null | NONE | null | null | null | I am working with the SST2 dataset, and am using TensorFlow 2.5
I'd like to convert it to a `tf.data.Dataset` by calling the `to_tf_dataset` method.
The following snippet is what I am using to achieve this:
```
from datasets import load_dataset
from transformers import DefaultDataCollator
data_collator = DefaultDataCollator(return_tensors="tf")
dataset = load_dataset("sst")
train_dataset = dataset["train"].to_tf_dataset(columns=['sentence'], label_cols="label", shuffle=True, batch_size=8,collate_fn=data_collator)
```
However, this only gets me the labels; the text--the most important part--is missing:
```
for s in train_dataset.take(1):
print(s) #prints something like: ({}, <tf.Tensor: shape=(8,), ...>)
```
As you can see, it only returns the label part, not the data, as indicated by the empty dictionary, `{}`. So far, I've played with various settings of the method arguments, but to no avail; I do not want to perform any text processing at this time. On my quest to achieve what I want ( a `tf.data.Dataset`), I've consulted these resources:
[https://www.philschmid.de/huggingface-transformers-keras-tf](https://www.philschmid.de/huggingface-transformers-keras-tf)
[https://huggingface.co/docs/datasets/use_dataset.html?highlight=tensorflow](https://huggingface.co/docs/datasets/use_dataset.html?highlight=tensorflow)
I was surprised to not find more extensive examples on how to transform a Hugginface dataset to one compatible with TensorFlow.
If you could point me to where I am going wrong, please do so.
Thanks in advance for your support.
---
Edit: In the [docs](https://huggingface.co/docs/datasets/package_reference/main_classes.html#datasets.Dataset.to_tf_dataset), I found the following description:
_In general, only columns that the model can use as input should be included here (numeric data only)._
Does this imply that no textual, i.e., `string` data can be loaded?
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https://api.github.com/repos/huggingface/datasets/issues/3686 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3686/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3686/comments | https://api.github.com/repos/huggingface/datasets/issues/3686/events | https://github.com/huggingface/datasets/issues/3686 | 1,127,137,290 | I_kwDODunzps5DLsAK | 3,686 | `Translation` features cannot be `flatten`ed | {
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"Thanks for reporting, @SBrandeis! Some additional feature types that don't behave as expected when flattened: `Audio`, `Image` and `TranslationVariableLanguages`"
] | 1,644,320,028,000 | 1,647,624,493,000 | 1,647,624,493,000 | CONTRIBUTOR | null | null | null | ## Describe the bug
(`Dataset.flatten`)[https://github.com/huggingface/datasets/blob/master/src/datasets/arrow_dataset.py#L1265] fails for columns with feature (`Translation`)[https://github.com/huggingface/datasets/blob/3edbeb0ec6519b79f1119adc251a1a6b379a2c12/src/datasets/features/translation.py#L8]
## Steps to reproduce the bug
```python
from datasets import load_dataset
dataset = load_dataset("europa_ecdc_tm", "en2fr", split="train[:10]")
print(dataset.features)
# {'translation': Translation(languages=['en', 'fr'], id=None)}
print(dataset[0])
# {'translation': {'en': 'Vaccination against hepatitis C is not yet available.', 'fr': 'Aucune vaccination contre l’hépatite C n’est encore disponible.'}}
dataset.flatten()
```
## Expected results
`dataset.flatten` should flatten the `Translation` column as if it were a dict of `Value("string")`
```python
dataset[0]
# {'translation.en': 'Vaccination against hepatitis C is not yet available.', 'translation.fr': 'Aucune vaccination contre l’hépatite C n’est encore disponible.' }
dataset.features
# {'translation.en': Value("string"), 'translation.fr': Value("string")}
```
## Actual results
```python
In [31]: dset.flatten()
---------------------------------------------------------------------------
KeyError Traceback (most recent call last)
<ipython-input-31-bb88eb5276ee> in <module>
----> 1 dset.flatten()
[...]\site-packages\datasets\fingerprint.py in wrapper(*args, **kwargs)
411 # Call actual function
412
--> 413 out = func(self, *args, **kwargs)
414
415 # Update fingerprint of in-place transforms + update in-place history of transforms
[...]\site-packages\datasets\arrow_dataset.py in flatten(self, new_fingerprint, max_depth)
1294 break
1295 dataset.info.features = self.features.flatten(max_depth=max_depth)
-> 1296 dataset._data = update_metadata_with_features(dataset._data, dataset.features)
1297 logger.info(f'Flattened dataset from depth {depth} to depth {1 if depth + 1 < max_depth else "unknown"}.')
1298 dataset._fingerprint = new_fingerprint
[...]\site-packages\datasets\arrow_dataset.py in update_metadata_with_features(table, features)
534 def update_metadata_with_features(table: Table, features: Features):
535 """To be used in dataset transforms that modify the features of the dataset, in order to update the features stored in the metadata of its schema."""
--> 536 features = Features({col_name: features[col_name] for col_name in table.column_names})
537 if table.schema.metadata is None or b"huggingface" not in table.schema.metadata:
538 pa_metadata = ArrowWriter._build_metadata(DatasetInfo(features=features))
[...]\site-packages\datasets\arrow_dataset.py in <dictcomp>(.0)
534 def update_metadata_with_features(table: Table, features: Features):
535 """To be used in dataset transforms that modify the features of the dataset, in order to update the features stored in the metadata of its schema."""
--> 536 features = Features({col_name: features[col_name] for col_name in table.column_names})
537 if table.schema.metadata is None or b"huggingface" not in table.schema.metadata:
538 pa_metadata = ArrowWriter._build_metadata(DatasetInfo(features=features))
KeyError: 'translation.en'
```
## Environment info
- `datasets` version: 1.18.3
- Platform: Windows-10-10.0.19041-SP0
- Python version: 3.7.10
- PyArrow version: 3.0.0
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https://api.github.com/repos/huggingface/datasets/issues/3685 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/3685/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/3685/comments | https://api.github.com/repos/huggingface/datasets/issues/3685/events | https://github.com/huggingface/datasets/pull/3685 | 1,126,240,444 | PR_kwDODunzps4yLw3m | 3,685 | Add support for `Audio` and `Image` feature in `push_to_hub` | {
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"> Cool thanks !\r\n> \r\n> Also cc @patrickvonplaten @anton-l it means that when calling push_to_hub, the audio bytes are embedded in the parquet files (we don't upload the audio files themselves)\r\n\r\nJust to verify quickly the size of the dataset doesn't change in this case no? E.g. if a dataset has say 20GB i... | 1,644,252,436,000 | 1,644,862,497,000 | 1,644,861,898,000 | CONTRIBUTOR | null | false | {
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} | Add support for the `Audio` and the `Image` feature in `push_to_hub`.
The idea is to remove local path information and store file content under "bytes" in the Arrow table before the push.
My initial approach (https://github.com/huggingface/datasets/commit/34c652afeff9686b6b8bf4e703c84d2205d670aa) was to use a map transform similar to [`decode_nested_example`](https://github.com/huggingface/datasets/blob/5e0f6068741464f833ff1802e24ecc2064aaea9f/src/datasets/features/features.py#L1023-L1056) while having decoding turned off, but I wasn't satisfied with the code quality, so I ended up using the `temporary_assignment` decorator to override `cast_storage`, which allows me to directly modify the underlying storage (the final op is similar to `Dataset.cast`) and results in a much simpler code.
Additionally, I added the `allow_cast` flag that can disable this behavior in the situations where it's not needed (e.g. the dataset is already in the correct format for the Hub, etc.)
EDIT:
`allow_cast` renamed to `embed_external_files` | {
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"Hi ! Thanks for the fix ! Do you know where this new URL comes from ?\r\n\r\nAlso we try to not use Google Drive if possible, since it has download quota limitations. Do you know if the data is available from another host than Google Drive ?",
"Oh, I found it just by following the link from the [IWSLT2017 homepa... | 1,644,134,215,000 | 1,645,793,020,000 | null | NONE | null | false | {
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} | Fixes #2076. | {
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