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java
private ObjectNode createResponseSuccess(String jsonRpc, Object id, JsonNode result) { ObjectNode response = mapper.createObjectNode(); response.put(JSONRPC, jsonRpc); if (Integer.class.isInstance(id)) { response.put(ID, Integer.class.cast(id).intValue()); } else if (Long.class.isInstance(id)) { response....
python
def fastgapfill(model_extended, core, solver, weights={}, epsilon=1e-5): """Run FastGapFill gap-filling algorithm by calling :func:`psamm.fastcore.fastcore`. FastGapFill will try to find a minimum subset of reactions that includes the core reactions and it also has no blocked reactions. Return the ...
python
def compute_tab_title(self, vte): """Abbreviate and cut vte terminal title when necessary """ vte_title = vte.get_window_title() or _("Terminal") try: current_directory = vte.get_current_directory() if self.abbreviate and vte_title.endswith(current_directory): ...
java
private void reportError(StorageDirectory sd) { if (storage instanceof NNStorage) { // pass null, since we handle the disable here ((NNStorage)storage).reportErrorsOnDirectory(sd, null); } else { LOG.error("Failed direcory: " + sd.getCurrentDir()); } }
java
public final void usage(String commandName, StringBuilder out, String indent) { String description = getCommandDescription(commandName); JCommander jc = commander.findCommandByAlias(commandName); if (description != null) { out.append(indent).append(description); out.appe...
java
@DefaultVisibilityForTesting static TagsComponent loadTagsComponent(@Nullable ClassLoader classLoader) { try { // Call Class.forName with literal string name of the class to help shading tools. return Provider.createInstance( Class.forName( "io.opencensus.impl.tags.TagsComponen...
java
public <T> MutateInBuilder insert(String path, T fragment, SubdocOptionsBuilder optionsBuilder) { asyncBuilder.insert(path, fragment, optionsBuilder); return this; }
java
@SuppressWarnings("unchecked") // <editor-fold defaultstate="collapsed" desc="Generated Code">//GEN-BEGIN:initComponents private void initComponents() { jLabel1 = new javax.swing.JLabel(); jTextField1 = new javax.swing.JTextField(); jLabel2 = new javax.swing.JLabel(); jTextField...
java
@Override protected void visitFunctionNode(FunctionNode node) { // Cannot simplify nonplugin functions. // TODO(brndn): we can actually simplify checkNotNull. if (node.getSoyFunction() instanceof BuiltinFunction) { return; } if (node.getSoyFunction() instanceof LoggingFunction) { retu...
python
def is_series(data): """ Checks whether the supplied data is of Series type. """ dd = None if 'dask' in sys.modules: import dask.dataframe as dd return((pd is not None and isinstance(data, pd.Series)) or (dd is not None and isinstance(data, dd.Series)))
java
public static JwtClaims getDefaultJwtClaims() { JwtClaims claims = new JwtClaims(); claims.setIssuer(jwtConfig.getIssuer()); claims.setAudience(jwtConfig.getAudience()); claims.setExpirationTimeMinutesInTheFuture(jwtConfig.getExpiredInMinutes()); claims.setGeneratedJwtId(); // ...
java
public void writeOverSet(int which, List<Point2D_I32> points) { BlockIndexLength set = sets.get(which); if( set.length != points.size() ) throw new IllegalArgumentException("points and set don't have the same length"); for (int i = 0; i < set.length; i++) { int index = set.start + i*2; int blockIndex = ...
python
def rescale(curves, values): """ Multiply the losses in each curve of kind (losses, poes) by the corresponding value. :param curves: an array of shape (A, 2, C) :param values: an array of shape (A,) """ A, _, C = curves.shape assert A == len(values), (A, len(values)) array = numpy.z...
python
def _fill_text(self, text, width, indent): """Wraps text like HelpFormatter, but doesn't squash lines This makes it easier to do lists and paragraphs. """ parts = text.split('\n\n') for i, part in enumerate(parts): # Check to see if it's a bulleted list--if so, then...
java
@Override public final void setLang(final Languages pLang) { this.lang = pLang; if (this.itsId == null) { this.itsId = new IdI18nCurrency(); } this.itsId.setLang(this.lang); }
java
private static boolean valueConstantsMatch(AbstractExpression e1, AbstractExpression e2) { return (e1 instanceof ParameterValueExpression && e2 instanceof ConstantValueExpression || e1 instanceof ConstantValueExpression && e2 instanceof ParameterValueExpression) && equalsAsCVE(e1...
java
protected IObjectPickler getCustomPickler(Class<?> t) { IObjectPickler pickler = customPicklers.get(t); if(pickler!=null) { return pickler; // exact match } // check if there's a custom pickler registered for an interface or abstract base class // that this object implements or inherits from. for(Entry...
java
public static HttpResponse execute(HttpRequestBase request) throws IOException { Assert.notNull(request, "Missing request!"); HttpClient client = HttpClientBuilder.create().setRedirectStrategy(new DefaultRedirectStrategy()).build(); return client.execute(request); }
python
def prev_this_next(it, sentinel=None): """Utility to return (prev, this, next) tuples from an iterator""" i1, i2, i3 = tee(it, 3) next(i3, None) return zip(chain([sentinel], i1), i2, chain(i3, [sentinel]))
java
final Entry<K, V> getEntry(Object key) { int hash = (key == null) ? 0 : hash(key); for (Entry<K, V> e = table[indexFor(hash, table.length)]; e != null; e = e.next) { if (e.hash == hash && ((e.key) == key || (key != null && key.equals(e.key)))) return e; } return null; }
python
def _init_request_logging(self, app): """ Sets up request logging unless ``APPINSIGHTS_DISABLE_REQUEST_LOGGING`` is set in the Flask config. Args: app (flask.Flask). the Flask application for which to initialize the extension. """ enabled = not app.config.get...
python
def WalkChildren(elem): """ Walk the XML tree of children below elem, returning each in order. """ for child in elem.childNodes: yield child for elem in WalkChildren(child): yield elem
java
@Deprecated public static void setIntHeader(HttpMessage message, String name, int value) { message.headers().setInt(name, value); }
python
def prox_max(X, step, thresh=0): """Projection onto numbers below `thresh` """ thresh_ = _step_gamma(step, thresh) above = X - thresh_ > 0 X[above] = thresh_ return X
java
final public void setOffset(Integer start, Integer end) { if ((start == null) || (end == null)) { // do nothing } else if (start > end) { throw new IllegalArgumentException("Start offset after end offset"); } else { tokenOffset = new MtasOffset(start, end); } }
python
def _prepare_find(cls, *args, **kw): """Execute a find and return the resulting queryset using combined plain and parametric query generation. Additionally, performs argument case normalization, refer to the `_prepare_query` method's docstring. """ cls, collection, query, options = cls._prepare_query( ...
python
def _getDevMajorMinor(self, devpath): """Return major and minor device number for block device path devpath. @param devpath: Full path for block device. @return: Tuple (major, minor). """ fstat = os.stat(devpath) if stat.S_ISBLK(fstat.st_mode): ...
python
def render_none(self, context, result): """Render empty responses.""" context.response.body = b'' del context.response.content_length return True
java
public static void assertEquals(JSONArray expected, JSONArray actual, JSONCompareMode compareMode) throws JSONException { assertEquals("", expected, actual, compareMode); }
java
public ModifyVpcEndpointConnectionNotificationRequest withConnectionEvents(String... connectionEvents) { if (this.connectionEvents == null) { setConnectionEvents(new com.amazonaws.internal.SdkInternalList<String>(connectionEvents.length)); } for (String ele : connectionEvents) { ...
java
@Override public String hget(String key, long field) { return this.hget(key, Long.toString(field)); }
python
def tensors_blocked_by_false(ops): """ Follows a set of ops assuming their value is False and find blocked Switch paths. This is used to prune away parts of the model graph that are only used during the training phase (like dropout, batch norm, etc.). """ blocked = [] def recurse(op): i...
python
def fetch_twitter_lists_for_user_ids_generator(twitter_app_key, twitter_app_secret, user_id_list): """ Collects at most 500 Twitter lists for each user from an input list of Twitter user ids. Inputs: - twitter_app...
python
def timestamp_to_str(t, datetime_format=DATETIME_FORMAT, *, inverse=False): """ Given a POSIX timestamp (integer) ``t``, format it as a datetime string in the given format. If ``inverse``, then do the inverse, that is, assume ``t`` is a datetime string in the given format and return its correspondin...
java
public EsiVerifyResponse getVerify(String userAgent, String xUserAgent, String datasource, String token, String authorization) throws ApiException { ApiResponse<EsiVerifyResponse> resp = getVerifyWithHttpInfo(userAgent, xUserAgent, datasource, token, authorization); return re...
python
def repr_return(func): """ This is a decorator to give the return value a pretty print repr """ def repr_return_decorator(*args, **kwargs): ret = func(*args, **kwargs) if isinstance(ret, basestring): return ret if type(ret) in repr_map: return repr_map[t...
java
public void logMapTaskFinished(TaskAttemptID taskAttemptId, long finishTime, String hostName, String taskType, String stateString, Counters counter) { ...
java
public static final KeyPressHandler getPercentKeyPressHandler() { // NOPMD it's thread save! if (HandlerFactory.percentKeyPressHandler == null) { synchronized (PercentKeyPressHandler.class) { if (HandlerFactory.percentKeyPressHandler == null) { HandlerFactory.percentKeyPressHandler = new Per...
python
def format_heading(self, heading): """ This translates any heading of "options" or "Options" into "SCons Options." Unfortunately, we have to do this here, because those titles are hard-coded in the optparse calls. """ if heading == 'Options': heading = "SCons...
java
public boolean isDescendant(DataDescriptor other) { if (other == null) return false; if (type == TYPE_INVALID || other.getType() == TYPE_INVALID) return false; String[] otherPath = other.getPath(); if (otherPath.length >= dataPath.length) return fals...
python
def download(self): """ MLBAM dataset download """ p = Pool() p.map(self._download, self.days)
python
def save_named_query(self, alias, querystring, afterwards=None): """ add an alias for a query string. These are stored in the notmuch database and can be used as part of more complex queries using the syntax "query:alias". See :manpage:`notmuch-search-terms(7)` for more info. ...
python
def endBy1(p, sep): '''`endBy1(p, sep) parses one or more occurrences of `p`, separated and ended by `sep`. Returns a list of values returned by `p`.''' return separated(p, sep, 1, maxt=float('inf'), end=True)
python
def AsDict(self, dt=True): """ A dict representation of this User instance. The return value uses the same key names as the JSON representation. Args: dt (bool): If True, return dates as python datetime objects. If False, return dates as ISO strings. Re...
python
def compose_info(root_dir, files, hash_fn, aleph_record, urn_nbn=None): """ Compose `info` XML file. Info example:: <?xml version="1.0" encoding="UTF-8" standalone="yes" ?> <info> <created>2014-07-31T10:58:53</created> <metadataversion>1.0</metadataversion> ...
java
public final void sendCombinedMessage(Message combinedMessage) { outValue.f1 = Either.Right(combinedMessage); out.collect(outValue); }
python
def _versions_from_changelog(changelog): """ Return all released versions from given ``changelog``, sorted. :param dict changelog: A changelog dict as returned by ``releases.util.parse_changelog``. :returns: A sorted list of `semantic_version.Version` objects. """ versions = [Version(x...
java
private static void roundAndAdd(Collection<Integer> result, double value) { int roundedValue = (int) Math.round(value); if (!result.contains(roundedValue)) { result.add(roundedValue); } }
java
public static String generateRandomCodeVerifier(SecureRandom entropySource, int entropyBytes) { byte[] randomBytes = new byte[entropyBytes]; entropySource.nextBytes(randomBytes); return Base64.getUrlEncoder().withoutPadding().encodeToString(randomBytes); }
java
@Override protected void parse() { confirmDropMessage = getBoolean(PARAM_CONFIRM_DROP_MESSAGE_KEY, false); buttonMode = getInt(PARAM_UI_BUTTON_MODE, BUTTON_MODE_SIMPLE); alwaysOnTop = getConfig().getBoolean(PARAM_BRK_ALWAYS_ON_TOP, null); inScopeOnly = getBoolean(PARAM_BRK_IN_SCOPE_O...
java
public MapBuilder<KEY, VALUE> putIfAbsent(KEY key, VALUE value) { getMap().putIfAbsent(key, value); return this; }
java
@Override public UpdateFieldLevelEncryptionProfileResult updateFieldLevelEncryptionProfile(UpdateFieldLevelEncryptionProfileRequest request) { request = beforeClientExecution(request); return executeUpdateFieldLevelEncryptionProfile(request); }
java
public static byte[] toByteArray(final long l) { final byte[] bytes = new byte[8]; bytes[0] = (byte) ((l >>> 56) & 0xff); bytes[1] = (byte) ((l >>> 48) & 0xff); bytes[2] = (byte) ((l >>> 40) & 0xff); bytes[3] = (byte) ((l >>> 32) & 0xff); bytes[4] = (byte) ((l >>>...
python
def listStoredSms(self, status=Sms.STATUS_ALL, memory=None, delete=False): """ Returns SMS messages currently stored on the device/SIM card. The messages are read from the memory set by the "memory" parameter. :param status: Filter messages based on this read status; must be 0-...
java
protected int getNextIndex(final int currentIndex) { if (!isPaused()) { return currentIndex + 1; } int ret = currentIndex; while (isPaused()) { sendStepPausing(ret + 1); try { Thread.sleep(getPauseSpan()); ...
python
def sink(wrapped): """Creates an SPL operator with a single input port. A SPL operator with a single input port and no output ports. For each tuple on the input port the decorated function is called passing the contents of the tuple. .. deprecated:: 1.8 Recommended to use :py:class:`@spl.f...
python
def _uri_split(uri): """Splits up an URI or IRI.""" scheme, netloc, path, query, fragment = _safe_urlsplit(uri) auth = None port = None if '@' in netloc: auth, netloc = netloc.split('@', 1) if netloc.startswith('['): host, port_part = netloc[1:].split(']', 1) if port_p...
java
public void reconnect(final JobID jobId) { Preconditions.checkNotNull(jobId, "JobID must not be null."); final Tuple2<LeaderRetrievalService, JobManagerLeaderListener> jobLeaderService = jobLeaderServices.get(jobId); if (jobLeaderService != null) { jobLeaderService.f1.reconnect(); } else { LOG.info("Can...
java
protected void createInitialAuthenticationRequestValidationCheckAction(final Flow flow) { val action = createActionState(flow, CasWebflowConstants.STATE_ID_INITIAL_AUTHN_REQUEST_VALIDATION_CHECK, CasWebflowConstants.ACTION_ID_INITIAL_AUTHN_REQUEST_VALIDATION); createTransitionForState(action...
java
@Override public void initializeParts() { super.initializeParts(); node = new ListView<>(); node.getStyleClass().add("simple-listview-control"); fieldLabel = new Label(field.labelProperty().getValue()); node.setItems(field.getItems()); node.getSelectionModel().setSelectionMode(SelectionMode...
python
def String(length=None, **kwargs): """A string valued property with max. `length`.""" return Property( length=length, types=stringy_types, convert=to_string, **kwargs )
java
@Override public Collection<V> put(K key, Collection<V> value) { throw new UnsupportedOperationException(); }
java
public ResourceBundle getResourceBundle(FacesContext ctx, String name) throws FacesException, NullPointerException { Application application = getMyfacesApplicationInstance(ctx); if (application != null) { return application.getResourceBundle(ctx, name); } throw n...
java
private void overrideViolationMessageIfNecessary(List<Violation> violations) { if (violationMessage != null && violations != null) { for (Violation violation : violations) { violation.setMessage(violationMessage); } } }
java
protected Double getBilinearInterpolationValue(GriddedTile griddedTile, TImage image, Double[][] leftLastColumns, Double[][] topLeftRows, Double[][] topRows, int y, int x, float widthRatio, float heightRatio, float destTop, float destLeft, float srcTop, float srcLeft) { // Determine which source pixel to...
java
private int getNewReconnectIvl() { // The new interval is the current interval + random value. int interval = currentReconnectIvl + (Utils.randomInt() % options.reconnectIvl); // Only change the current reconnect interval if the maximum reconnect // interval was set and if it's ...
python
def delete_group(self, group): """ Group was deleted. """ try: lgroup = self._get_group(group.name) delete(lgroup, database=self._database) except ObjectDoesNotExist: # it doesn't matter if it doesn't exist pass
java
public <CTX> HtmlSanitizer.Policy build( HtmlStreamEventReceiver out, @Nullable HtmlChangeListener<? super CTX> listener, @Nullable CTX context) { return toFactory().apply(out, listener, context); }
java
public static Map<InetAddress, UUID> loadHostIds() { Map<InetAddress, UUID> hostIdMap = new HashMap<InetAddress, UUID>(); for (UntypedResultSet.Row row : executeInternal("SELECT peer, host_id FROM system." + PEERS_CF)) { InetAddress peer = row.getInetAddress("peer"); ...
python
def applyTuple(self, tuple, right, env): """Apply a tuple to something else.""" if len(right) != 1: raise exceptions.EvaluationError('Tuple (%r) can only be applied to one argument, got %r' % (self.left, self.right)) right = right[0] return tuple(right)
java
public DynamicType.Builder<T> merge(Collection<? extends ModifierContributor.ForType> modifierContributors) { throw new UnsupportedOperationException("Cannot change modifiers of decorated type: " + instrumentedType); }
python
async def make_default_options_response(self) -> Response: """This is the default route function for OPTIONS requests.""" methods = _request_ctx_stack.top.url_adapter.allowed_methods() return self.response_class('', headers={'Allow': ', '.join(methods)})
java
public long getFreeSpace() { try { StructStatVfs sb = Libcore.os.statvfs(path); return sb.f_bfree * sb.f_bsize; // free block count * block size in bytes. } catch (ErrnoException errnoException) { return 0; } }
java
@Pure public static Element getElementFromPath(Node document, boolean caseSensitive, String... path) { assert document != null : AssertMessages.notNullParameter(0); return getElementFromPath(document, caseSensitive, 0, path); }
java
private EConvResult transConv(byte[] in, Ptr inPtr, int inStop, byte[] out, Ptr outPtr, int outStop, int flags, Ptr resultPositionPtr) { // null check if (elements[0].lastResult == EConvResult.AfterOutput) elements[0].lastResult = EConvResult.SourceBufferEmpty; for (int i = numTranscoders...
java
public <A extends Annotation> A findAnnotationOnBean(Class<A> annotationType) { return applicationContext.findAnnotationOnBean(beanName, annotationType); }
python
def bothify(self, text='## ??', letters=string.ascii_letters): """ Replaces all placeholders with random numbers and letters. :param text: string to be parsed :returns: string with all numerical and letter placeholders filled in """ return self.lexify(self.numerify(text)...
python
def from_json_str(cls, json_str): """Convert json string representation into class instance. Args: json_str: json representation as string. Returns: New instance of the class with data loaded from json string. """ return cls.from_json(json.loads(json_str, cls=JsonDecoder))
python
def iteritems(self): """Present the email headers""" for n,v in self.msgobj.__dict__["_headers"]: yield n.lower(), v return
java
public static String getGeometryTypeNameFromConstraint(String constraint, int numericPrecision) { int geometryTypeCode = GeometryTypeFromConstraint.geometryTypeFromConstraint(constraint, numericPrecision); return SFSUtilities.getGeometryTypeNameFromCode(geometryTypeCode); }
java
@Override public void groupingValue(String collateName) { // collationName is ignored for now if (groupBy == null) { groupBy = new ArrayList<>(ARRAY_INITIAL_LENGTH); } groupBy.add(resolveAlias(propertyPath)); }
java
private void checkTenantApps(Tenant tenant) { m_logger.info(" Tenant: {}", tenant.getName()); try { Iterator<DRow> rowIter = DBService.instance(tenant).getAllRows(SchemaService.APPS_STORE_NAME).iterator(); if (!rowIter.hasNext()) { m_logger...
python
def dnld_gaf(species_txt, prt=sys.stdout, loading_bar=True): """Download GAF file if necessary.""" return dnld_gafs([species_txt], prt, loading_bar)[0]
python
def parse(self, target): """ Parse nested rulesets and save it in cache. """ if isinstance(target, ContentNode): if target.name: self.parent = target self.name.parse(self) self.name += target.name target.ruleset....
python
def site(self, **params): """Stream site Accepted params found at: https://dev.twitter.com/docs/api/1.1/get/site """ url = 'https://sitestream.twitter.com/%s/site.json' \ % self.streamer.api_version self.streamer._request(url, params=params)
java
public boolean userHasLock(String username) { Objects.requireNonNull(username, Required.USERNAME.toString()); boolean lock = false; Config config = Application.getInstance(Config.class); Cache cache = Application.getInstance(CacheProvider.class).getCache(CacheName.AUTH); ...
java
public TextMessageBuilder addQuickLocationReply(String locationMessage) { if (this.quickReplies == null) { this.quickReplies = new ArrayList<QuickReply>(); } this.quickReplies.add(new QuickReply(locationMessage)); return this; }
python
def validate(self): """ validate: Makes sure audio is valid Args: None Returns: boolean indicating if audio is valid """ from .files import AudioFile try: assert self.kind == content_kinds.AUDIO, "Assumption Failed: Node should be audio" as...
python
def _group_chunks_by_entities(self, chunks, entities): """Groups chunks by entities retrieved from NL API Entity Analysis. Args: chunks (:obj:`budou.chunk.ChunkList`): List of chunks to be processed. entities (:obj:`list` of :obj:`dict`): List of entities. Returns: A chunk list. (:obj:`b...
python
def _namify_arguments(mapping): """ Ensure that a mapping of names to parameters has the parameters set to the correct name. """ result = [] for name, parameter in mapping.iteritems(): parameter.name = name result.append(parameter) return result
python
def gradings(gradingScheme): ''' Determine the list of gradings in this scheme as rendered string. TODO: Use nice little icons instead of (p) / (f) marking. ''' result = [] for grading in gradingScheme.gradings.all(): if grading.means_passed: result.append(str(grading) + " (p...
java
@Override public Object evaluate(DeferredObject[] arguments) throws HiveException { if ((arguments==null) || (arguments.length!=1)) { return null; } BitcoinTransaction bitcoinTransaction; if (arguments[0].get() instanceof HiveBitcoinTransaction) { // this happens if the table is in the original file format bi...
python
def calculate_lvgd_voltage_current_stats(nw): """ LV Voltage and Current Statistics for an arbitrary network Note ---- Aggregated Load Areas are excluded. Parameters ---------- nw: :any:`list` of NetworkDing0 The MV grid(s) to be studied Returns ------- pandas.Data...
python
def _parse_custom_mpi_options(custom_mpi_options): # type: (str) -> Tuple[argparse.Namespace, List[str]] """Parse custom MPI options provided by user. Known options default value will be overridden and unknown options would be identified separately.""" parser = argparse.ArgumentParser() parser.add_...
python
def parabola(xy, amplitude, x0, y0, sx, sy, theta): """Evaluate a 2D parabola given by: f(x,y) = f_0 - (1/2) * \delta^T * R * \Sigma * R^T * \delta where \delta = [(x - x_0), (y - y_0)] and R is the matrix for a 2D rotation by angle \theta and \Sigma is the covariance matrix: \Sigma = [...
java
static DateTime determineRotationPeriodAnchor(@Nullable DateTime lastAnchor, Period period) { final Period normalized = period.normalizedStandard(); int years = normalized.getYears(); int months = normalized.getMonths(); int weeks = normalized.getWeeks(); int days = normalized.ge...
python
def get_box_folder_location(): """ Try to locate the Box folder. Returns: (str) Full path to the current Box folder """ box_prefs_path = ('Library/Application Support/Box/Box Sync/' 'sync_root_folder.txt') box_home = None box_prefs = os.path.join(os.environ['H...
python
def inference(self, kern, X, Z, likelihood, Y, indexD, output_dim, Y_metadata=None, Lm=None, dL_dKmm=None, Kuu_sigma=None): """ The first phase of inference: Compute: log-likelihood, dL_dKmm Cached intermediate results: Kmm, KmmInv, """ input_dim = Z.shape[0] u...
python
def check_labels_file_header(filename): """Validate that filename corresponds to labels for the MNIST dataset.""" with tf.gfile.Open(filename, 'rb') as f: magic = read32(f) read32(f) # num_items, unused if magic != 2049: raise ValueError('Invalid magic number %d in MNIST file %s' % (magic, ...
python
def export(self, image_path, tmptar=None): '''export will export an image, sudo must be used. Parameters ========== image_path: full path to image tmptar: if defined, use custom temporary path for tar export ''' from spython.utils import check_install check_install() ...