language stringclasses 2
values | func_code_string stringlengths 63 466k |
|---|---|
python | def defer(
self,
func: typing.Callable[[], typing.Any],
until: typing.Union[int, float]=-1,
) -> typing.Any:
"""Defer the execution of a function until some clock value.
Args:
func (typing.Callable[[], typing.Any]): A callable that accepts no
... |
java | public static ZonedDateTime toZonedDateTimeUtc(final long epoch) {
final EpochUnits units = EpochUnits.valueOf(epoch);
return toZonedDateTimeUtc(epoch, units);
} |
java | private static int popcount_fbsd2_2(int[] data, int x, int n) {
int cnt = 0;
for (x++; x < n; x += 2)
cnt += Integer.bitCount(data[x]);
return cnt;
} |
java | public static RawJsonDocument create(String id, int expiry, String content) {
return new RawJsonDocument(id, expiry, content, 0, null);
} |
java | public static boolean cs_pvec(int [] p, DZcsa b, DZcsa x, int n)
{
int k ;
if (x == null || b == null) return (false) ; /* check inputs */
for (k = 0 ; k < n ; k++) x.set(k, b.get(p != null ? p [k] : k)) ;
return (true) ;
} |
java | private void combineHistogramDifferentBuckets(FixedBucketsHistogram otherHistogram)
{
if (otherHistogram.getLowerLimit() >= upperLimit) {
outlierHandler.handleOutliersCombineDifferentBucketsAllUpper(otherHistogram);
} else if (otherHistogram.getUpperLimit() <= lowerLimit) {
outlierHandler.handleOu... |
java | private static final void auditNamedValues(String m, Map<String, ?> namedValues) {
if (logger.isDebugEnabled()) {
assert namedValues != null;
for (Iterator<String> outer = namedValues.keySet().iterator(); outer
.hasNext();) {
Object name = outer.next()... |
java | public static <T> void isNotSame( final T argument,
String argumentName,
final T object,
String objectName ) {
if (argument == object) {
if (objectName == null) objectName = getObjectNam... |
java | public static Map<TypeVariable, Type> getTypeVariableMap(Class<?> clazz) {
Map<TypeVariable, Type> typeVariableMap = typeVariableCache.get(clazz);
if (typeVariableMap == null) {
typeVariableMap = new HashMap<TypeVariable, Type>();
// interfaces
extractTypeVariablesFromGenericInterfaces(clazz.getGenericIn... |
python | def run_service_actions(self):
"""Run any actions on services requested."""
if not self.service_actions:
return
for svc_action in self.service_actions:
name = svc_action['service']
actions = svc_action['actions']
log("Running service '%s' actions ... |
java | public void setChild(final int index, final String label) {
final Parse newChild = (Parse) this.parts.get(index).clone();
newChild.setLabel(label);
this.parts.set(index, newChild);
} |
python | def process_rewards(self, rewards):
"""Clips, rounds, and changes to integer type.
Args:
rewards: numpy array of raw (float) rewards.
Returns:
processed_rewards: numpy array of np.int64
"""
min_reward, max_reward = self.reward_range
# Clips at min and max reward.
rewards = np... |
java | @Override
public Partition[] getPartitions(S config) {
jdbcDeepJobConfig = initConfig(config, jdbcDeepJobConfig);
int upperBound = jdbcDeepJobConfig.getUpperBound();
int lowerBound = jdbcDeepJobConfig.getLowerBound();
int numPartitions = jdbcDeepJobConfig.getNumPartitions();
... |
python | def convert_to_record(func):
"""Wrap mongodb record to a dict record with default value None
"""
@functools.wraps(func)
def wrapper(self, *args, **kwargs):
result = func(self, *args, **kwargs)
if result is not None:
if isinstance(result, dict):
return _record(... |
python | def invoke(self, function_name, raw_python=False, command=None, no_color=False):
"""
Invoke a remote function.
"""
# There are three likely scenarios for 'command' here:
# command, which is a modular function path
# raw_command, which is a string of python to execute... |
java | public boolean interrupt (final String fireInstanceId) throws UnableToInterruptJobException
{
final ICommonsList <IJobExecutionContext> jobs = getCurrentlyExecutingJobs ();
IJob job = null;
for (final IJobExecutionContext jec : jobs)
{
if (jec.getFireInstanceId ().equals (fireInstanceId))
... |
java | private void waitForConditionOrTimeout() throws InterruptedException {
waitStart = System.currentTimeMillis();
while (state == State.RequestSent || state == State.Initial) {
long timeout = connection.getReplyTimeout();
long remainingWaitMillis = timeout - (System.currentTimeMilli... |
python | def title(self):
""" The title of this window """
with switch_window(self._browser, self.name):
return self._browser.title |
python | async def add_claims(self, payload, user, *args, **kwargs):
"""
Injects standard claims into the payload for: exp, iss, iat, nbf, aud.
And, custom claims, if they exist
"""
delta = timedelta(seconds=self.config.expiration_delta())
exp = datetime.utcnow() + delta
a... |
java | public static double[][] readFromFile(String filePath) {
double[][] weights;
Vector<double[]> listOfWeights = new Vector<>();
try {
// Open the file
FileInputStream fis = new FileInputStream(filePath);
InputStreamReader isr = new InputStreamReader(fis);
BufferedReader br = new BufferedReader(isr... |
java | void clear()
{
documents_.clear();
composite_.clear();
if (centroid_ != null)
centroid_.clear();
if (sectioned_clusters_ != null)
sectioned_clusters_.clear();
sectioned_gain_ = 0.0;
} |
python | def load_flag_values(self, flags=None):
"""Load flag values given from command line flags.
Args:
flags: An argparse Namespace containing the command line flags.
"""
if flags is None:
flags = self._flags
for keyval in flags.config_value:
k, v = keyval.split('=', 1)
v = self._... |
java | protected static <O> void initializeMatrices(MatrixParadigm mat, ArrayModifiableDBIDs prots, DistanceQuery<O> dq) {
final DBIDArrayIter ix = mat.ix, iy = mat.iy;
final double[] distances = mat.matrix;
int pos = 0;
for(ix.seek(0); ix.valid(); ix.advance()) {
for(iy.seek(0); iy.getOffset() < ix.getO... |
python | def file_length(in_file):
'''Function to return the length of a file.'''
fid = open(in_file)
data = fid.readlines()
fid.close()
return len(data) |
python | def publication_info(self, key, value):
"""Populate the ``publication_info`` key."""
def _get_cnum(value):
w_value = force_single_element(value.get('w', ''))
normalized_w_value = w_value.replace('/', '-').upper()
return normalized_w_value
def _get_material(value):
schema = ... |
java | public Mono<Response<ConfigurationSetting>> updateSetting(ConfigurationSetting setting) {
// Validate that setting and key is not null. The key is used in the service URL so it cannot be null.
validateSetting(setting);
String etag = setting.etag() == null ? ETAG_ANY : setting.etag();
r... |
python | def num_qubits(self) -> Optional[int]:
"""Returns number of qubits in the domain if known, None if unknown."""
if not self:
return None
any_gate = next(iter(self))
return any_gate.num_qubits() |
java | public void encodeUnsignedInteger(int n) throws IOException {
if (n < 0) {
throw new UnsupportedOperationException();
}
if (n < 128) {
// write byte as is
encode(n);
} else {
final int n7BitBlocks = MethodsBag.numberOf7BitBlocksToRepresent(n);
switch (n7BitBlocks) {
case 5:
encode(128 | ... |
java | public void paint(Paintable paintable, Object group, MapContext context) {
// Group for objects in raster space
context.getRasterContext().drawGroup(null, mapWidget.getGroup(RenderGroup.RASTER),
mapWidget.getMapModel().getMapView()
.getPanToViewTranslation());
// Group for objects in vector space
cont... |
java | public static String convert32(String s)
{
try {
byte[] bytes = s.getBytes();
MessageDigest md = MessageDigest.getInstance("MD5");
md.update(bytes);
bytes = md.digest();
int j = bytes.length;
char[] chars = new char[j * 2];
... |
python | def get_colr(txt, argd):
""" Return a Colr instance based on user args. """
fore = parse_colr_arg(
get_name_arg(argd, '--fore', 'FORE', default=None),
rgb_mode=argd['--truecolor'],
)
back = parse_colr_arg(
get_name_arg(argd, '--back', 'BACK', default=None),
rgb_mode=argd[... |
python | def afw_word_acceptance(afw: dict, word: list) -> bool:
""" Checks if a **word** is accepted by input AFW, returning
True/False.
The word w is accepted by a AFW if exists at least an
accepting run on w. A run for AFWs is a tree and
an alternating automaton can have multiple runs on a given
inpu... |
java | public final boolean warmStarted()
{
final String methodName = "warmStarted";
if (Tracing.isAnyTracingEnabled() && trace.isEntryEnabled())
trace.entry(this,
cclass,
methodName);
boolean isWarmStarted = false;
if (objectMana... |
java | public static PathFragment[] from(Filter... filters) {
PathFragment[] ret = new PathFragment[filters.length];
Arrays.setAll(ret, (i) -> new PathFragment(filters[i]));
return ret;
} |
python | def bed(args):
"""
%prog bed frgscffile
Convert the frgscf posmap file to bed format.
"""
p = OptionParser(bed.__doc__)
opts, args = p.parse_args(args)
if len(args) != 1:
sys.exit(not p.print_help())
frgscffile, = args
bedfile = frgscffile.rsplit(".", 1)[0] + ".bed"
fw... |
java | protected void initSettings(Element root, CmsXmlContentDefinition contentDefinition) {
Iterator<Element> itProperties = CmsXmlGenericWrapper.elementIterator(root, APPINFO_SETTING);
while (itProperties.hasNext()) {
Element element = itProperties.next();
CmsXmlContentProperty sett... |
python | def report_stats(self, payload, is_retry=False):
"""
Send data to graphite host
:param payload: Data to send to graphite
"""
if self.debug:
if self.pickle_proto:
print "reporting pickled stats"
else:
print "reporting stats ... |
java | @TCB
static String stripBannedCodeunits(String s) {
int safeLimit = longestPrefixOfGoodCodeunits(s);
if (safeLimit < 0) { return s; }
StringBuilder sb = new StringBuilder(s);
stripBannedCodeunits(sb, safeLimit);
return sb.toString();
} |
java | public O setParallelism(int dop) {
if(dop < 1) {
throw new IllegalArgumentException("The parallelism of an operator must be at least 1.");
}
this.dop = dop;
@SuppressWarnings("unchecked")
O returnType = (O) this;
return returnType;
} |
python | def reboot(self, subid, params=None):
''' /v1/server/reboot
POST - account
Reboot a virtual machine. This is a hard reboot
(basically, unplugging the machine).
Link: https://www.vultr.com/api/#server_reboot
'''
params = update_params(params, {'SUBID': subid})
... |
java | protected static String intsToCommaDelimitedString(int[] ints) {
if (ints == null) {
return "";
}
StringBuilder result = new StringBuilder();
for (int i = 0; i < ints.length; i++) {
result.append(ints[i]);
if (i < (ints.length - 1)) {
... |
python | def read_git_commit_timestamp(repo_path=None):
"""Obtain the timestamp from the current head commit of a Git repository.
Parameters
----------
repo_path : `str`, optional
Path to the Git repository. Leave as `None` to use the current working
directory.
Returns
-------
commi... |
java | public String getID() {
byte[] genBytes = new byte[_byteArraySize];
synchronized(_random) {
_random.nextBytes(genBytes);
}
String id = convertSessionIdBytesToSessionId(genBytes, _sessionIDLength);
if (logger.isLoggable(Level.FINE)) {
logger.logp(Level.FINE... |
python | def iter_child_nodes(node):
"""Iterate over all child nodes or a node."""
for name, field in iter_fields(node):
if isinstance(field, AST):
yield field
elif isinstance(field, list):
for item in field:
if isinstance(item, AST):
yield item |
java | @Override
public UpdateServicePrimaryTaskSetResult updateServicePrimaryTaskSet(UpdateServicePrimaryTaskSetRequest request) {
request = beforeClientExecution(request);
return executeUpdateServicePrimaryTaskSet(request);
} |
java | private void read_env() {
String env;
try {
if ((env = System.getProperty("TANGO_HOST")) == null) {
if ((env = System.getenv("TANGO_HOST")) == null) {
Except.throw_connection_failed("TangoApi_TANGO_HOST_NOT_SET",
"Property \"TANGO_HOST\" not exported", "TangoDs.Util.read_env()... |
python | def check_nonbond(molecule, thresholds):
"""Check whether all nonbonded atoms are well separated.
If a nonbond atom pair is found that has an interatomic distance below
the given thresholds. The thresholds dictionary has the following format:
{frozenset([atom_number1, atom_number2]): distance}... |
python | async def unixlisten(path, onlink):
'''
Start an PF_UNIX server listening on the given path.
'''
info = {'path': path, 'unix': True}
async def onconn(reader, writer):
link = await Link.anit(reader, writer, info=info)
link.schedCoro(onlink(link))
return await asyncio.start_unix_se... |
python | def read_feather(cls, path, columns=None, use_threads=True):
"""Read a pandas.DataFrame from Feather format.
Ray DataFrame only supports pyarrow engine for now.
Args:
path: The filepath of the feather file.
We only support local files for now.
mu... |
python | def suggest_charges(self, tolerance=0.1):
"""
Suggest possible charges for defects to computee based on proximity
of known transitions from entires to VBM and CBM
Args:
tolerance (float): tolerance with respect to the VBM and CBM to
` continue to... |
java | private File newSubdirectory(File parentDirectory, String path) {
File dir = new File(parentDirectory, path);
if (!dir.exists()) {
dir.mkdirs();
}
return dir;
} |
java | public static String formatDateRange(Context context, ReadablePartial start, ReadablePartial end, int flags) {
return formatDateRange(context, toMillis(start), toMillis(end), flags);
} |
python | def get_available_mfds():
'''
Returns an ordered dictionary with the available GSIM classes
keyed by class name
'''
mfds = {}
for fname in os.listdir(os.path.dirname(__file__)):
if fname.endswith('.py'):
modname, _ext = os.path.splitext(fname)
mod = importlib.impo... |
python | async def ResolveCharms(self, references):
'''
references : typing.Sequence[str]
Returns -> typing.Sequence[~ResolveCharmResult]
'''
# map input types to rpc msg
_params = dict()
msg = dict(type='Client',
request='ResolveCharms',
... |
java | public static JCGLFramebufferStatus framebufferStatusFromGL(
final int status)
{
switch (status) {
case GL.GL_FRAMEBUFFER_COMPLETE:
return JCGLFramebufferStatus.FRAMEBUFFER_STATUS_COMPLETE;
case GL.GL_FRAMEBUFFER_INCOMPLETE_ATTACHMENT:
return JCGLFramebufferStatus
.FRAMEB... |
python | def get_callable_name(c):
""" Get a human-friendly name for the given callable.
:param c: The callable to get the name for
:type c: callable
:rtype: unicode
"""
if hasattr(c, 'name'):
return six.text_type(c.name)
elif hasattr(c, '__name__'):
return six.text_type(c.__name__) ... |
java | public Observable<Void> deleteAsync(String jobId, JobDeleteOptions jobDeleteOptions) {
return deleteWithServiceResponseAsync(jobId, jobDeleteOptions).map(new Func1<ServiceResponseWithHeaders<Void, JobDeleteHeaders>, Void>() {
@Override
public Void call(ServiceResponseWithHeaders<Void, Jo... |
python | def from_params(cls, params: Params, instances: Iterable['adi.Instance'] = None): # type: ignore
"""
There are two possible ways to build a vocabulary; from a
collection of instances, using :func:`Vocabulary.from_instances`, or
from a pre-saved vocabulary, using :func:`Vocabulary.from_f... |
java | private static List<byte[]> parsePrivateKeyASN1(ByteBuffer byteBuffer) {
final List<byte[]> collection = new ArrayList<byte[]>();
while (byteBuffer.hasRemaining()) {
byte type = byteBuffer.get();
int length = UnsignedBytes.toInt(byteBuffer.get());
if ((length & 0x80) != 0) {
int number... |
python | def build_backend(tasks, default_host=('127.0.0.1', DEFAULT_PORT), *args,
**kw):
"""
Most of these args are passed directly to BackEnd(). However, default_host
is used a bit differently. It should be a (host, port) pair, and may be
overridden with cmdline args:
file.py localho... |
java | @NotNull
@ObjectiveCName("addPreferredLanguage:")
public ConfigurationBuilder addPreferredLanguage(String language) {
if (!preferredLanguages.contains(language)) {
preferredLanguages.add(language);
}
return this;
} |
python | def getElementsByTagName(self, tagName, root='root', useIndex=True):
'''
getElementsByTagName - Searches and returns all elements with a specific tag name.
@param tagName <lowercase str> - A lowercase string of the tag name.
@param root <AdvancedTag/'... |
python | def nvmlDeviceSetPersistenceMode(handle, mode):
r"""
/**
* Set the persistence mode for the device.
*
* For all products.
* For Linux only.
* Requires root/admin permissions.
*
* The persistence mode determines whether the GPU driver software is torn down after the last client... |
java | private void handleExceptions(Subroutine subroutine, InstructionHandle pei, BasicBlock etb) {
etb.setExceptionThrower(pei);
// Remember whether or not a universal exception handler
// is reachable. If so, then we know that exceptions raised
// at this instruction cannot propagate out of... |
java | public Stack withStackErrors(StackError... stackErrors) {
if (this.stackErrors == null) {
setStackErrors(new java.util.ArrayList<StackError>(stackErrors.length));
}
for (StackError ele : stackErrors) {
this.stackErrors.add(ele);
}
return this;
} |
java | public void marshall(CreateLicenseConfigurationRequest createLicenseConfigurationRequest, ProtocolMarshaller protocolMarshaller) {
if (createLicenseConfigurationRequest == null) {
throw new SdkClientException("Invalid argument passed to marshall(...)");
}
try {
protocol... |
python | def extract_examples_from_readme_rst(indent=' '):
"""Extract examples from this project's README.rst file.
Parameters
----------
indent: str
Prepend each line with this string. Should contain some number of spaces.
Returns
-------
str
The examples.
Notes
-----
... |
java | public ResourceGroupInner patch(String resourceGroupName, ResourceGroupInner parameters) {
return patchWithServiceResponseAsync(resourceGroupName, parameters).toBlocking().single().body();
} |
python | def dot(self, other):
"""Calculates the dot product of this vector and another vector."""
dot_product = 0
a = self.elements
b = other.elements
a_len = len(a)
b_len = len(b)
i = j = 0
while i < a_len and j < b_len:
a_val = a[i]
b_va... |
java | @Override
protected void configureCamera(CameraDevice device, CameraCharacteristics characteristics, CaptureRequest.Builder captureRequestBuilder) {
captureRequestBuilder.set(CaptureRequest.CONTROL_AF_MODE, CaptureRequest.CONTROL_AF_MODE_CONTINUOUS_VIDEO);
captureRequestBuilder.set(CaptureRequest.CONTROL_AE_MODE, ... |
python | def average_cq(seq, efficiency=1.0):
"""Given a set of Cq values, return the Cq value that represents the
average expression level of the input.
The intent is to average the expression levels of the samples,
since the average of Cq values is not biologically meaningful.
:param iterable seq: A sequ... |
python | def _format(val, valtype, floatfmt, missingval="", has_invisible=True):
"""Format a value accoding to its type.
Unicode is supported:
>>> hrow = ['\u0431\u0443\u043a\u0432\u0430', '\u0446\u0438\u0444\u0440\u0430'] ; \
tbl = [['\u0430\u0437', 2], ['\u0431\u0443\u043a\u0438', 4]] ; \
good_re... |
python | def list_roles(self):
"""Simplified version of get_roles that returns a dict of just name: id for the roles"""
json_resp = self.get_roles()
temp_dict = {}
for item in json_resp:
temp_dict[item["name"]] = item["id"]
return temp_dict |
python | def cmd(tgt,
fun,
arg=(),
timeout=None,
tgt_type='glob',
kwarg=None):
'''
.. versionadded:: 2015.5.0
.. versionchanged:: 2017.7.0
The ``expr_form`` argument has been renamed to ``tgt_type``, earlier
releases must use ``expr_form``.
Execute a singl... |
java | public static <T> ISeq<T> front(
final Seq<? extends T> set,
final Comparator<? super T> dominance
) {
final MSeq<T> front = MSeq.of(set);
int n = front.size();
int i = 0;
while (i < n) {
int j = i + 1;
while (j < n) {
if (dominance.compare(front.get(i), front.get(j)) > 0) {
--n;
front... |
java | public void dump() {
Datum<L, F> allFeatures = new BasicDatum<L, F>(features(), (L)null);
justificationOf(allFeatures);
} |
java | static FileInputStream createFileInputStream(final File file) throws IOException
{
try {
FileInputStream fs = getInstance().doPrivileged(
new PrivilegedExceptionAction<FileInputStream>() {
public FileInputStream run() throws IOException {
return new FileInputStream(file);
}
}
);
... |
java | public GetItemRequest withExpressionAttributeNames(java.util.Map<String, String> expressionAttributeNames) {
setExpressionAttributeNames(expressionAttributeNames);
return this;
} |
python | def create(cls, fqdn, flags, algorithm, public_key):
"""Create a dnssec key."""
fqdn = fqdn.lower()
params = {
'flags': flags,
'algorithm': algorithm,
'public_key': public_key,
}
result = cls.call('domain.dnssec.create', fqdn, params)
... |
python | def bind(self, **kwargs):
"""Subscribes to events or to :class:`~pydispatch.properties.Property` updates
Keyword arguments are used with the Event or Property names as keys
and the callbacks as values::
class Foo(Dispatcher):
name = Property()
foo = Foo... |
python | def submain(p):
"""
completly set-up a package in the target dir (using cookie cutter)
"""
parser = argparse.ArgumentParser(description='Bootstrap a Python Package with Love.')
parser.add_argument('name', metavar='name', type=str, nargs='?',
help='a potential packag... |
java | @Override
public Collection<AgentProjectInfo> collectDependencies(String rootDirectory) {
Collection<AgentProjectInfo> projects = new ArrayList<>();
if (!this.isMavenExist(rootDirectory)) {
logger.warn("Please install maven");
} else {
if (runPreStep) {
... |
python | def delete_host_from_segment(ipaddress, networkaddress, auth, url):
'''Function to abstract
'''
host_id = get_host_id(ipaddress, networkaddress, auth, url)
remove_scope_ip(host_id, auth.creds, auth.url) |
python | def float_str(value, order="pprpr", size=[4, 5, 3, 6, 4],
after=False, max_denominator=1000000):
"""
Pretty string from int/float.
"Almost" automatic string formatter for integer fractions, fractions of
:math:`\pi` and float numbers with small number of digits.
Outputs a representation among `... |
python | def _update_shared_response(X, S, W, features):
"""Update the shared response `R`.
Parameters
----------
X : list of 2D arrays, element i has shape=[voxels_i, timepoints]
Each element in the list contains the fMRI data for alignment of
one subject.
S : ... |
java | public static synchronized IClient getNamedClient(String name, Class<? extends IClientConfig> configClass) {
if (simpleClientMap.get(name) != null) {
return simpleClientMap.get(name);
}
try {
return createNamedClient(name, configClass);
} catch (ClientException e) {
... |
python | def _get_tax(self, order_book_id, _, cost_money):
"""
港交所收费项目繁多，按照如下逻辑计算税费：
1. 税费比例为 0.11%，不足 1 元按 1 元记，四舍五入保留两位小数（包括印花税、交易征费、交易系统使用费）。
2，五元固定费用（包括卖方收取的转手纸印花税、买方收取的过户费用）。
"""
instrument = Environment.get_instance().get_instrument(order_book_id)
if instrument.type ... |
java | @Override
public DisassociateWebACLResult disassociateWebACL(DisassociateWebACLRequest request) {
request = beforeClientExecution(request);
return executeDisassociateWebACL(request);
} |
java | public synchronized void onRequestFailed(Throwable reason) {
executing.decrement();
failed.increment();
lastFailureReason = (reason == null) ? null : reason.getClass()
.getName() + ": " + reason.getMessage();
} |
python | def bind(self, data_shapes, label_shapes=None, for_training=True,
inputs_need_grad=False, force_rebind=False, shared_module=None, grad_req='write'):
"""Binds the symbols to construct executors for both two modules. This is necessary before one
can perform computation with the SVRGModule.
... |
python | def find_keys(self, regex, bucket_name=None):
"""Finds a list of S3 keys matching the passed regex
Given a regular expression, this method searches the S3 bucket
for matching keys, and returns an array of strings for matched
keys, an empty array if non are found.
:param regex: ... |
java | @Override
public final void configureThresholdEvaluatorBuilder(final ThresholdsEvaluatorBuilder thrb, final ICommandLine cl) throws BadThresholdException {
thrb.withLegacyThreshold("time", null, cl.getOptionValue("warning"), cl.getOptionValue("critical"));
if (cl.hasOption("regex")) {
if... |
java | protected CheckGroup<T> newCheckGroup(final String id,
final IModel<? extends Collection<T>> model)
{
final CheckGroup<T> checkGroup = ComponentFactory.newCheckGroup(id, model);
checkGroup.add(new AjaxFormChoiceComponentUpdatingBehavior()
{
/** The serialVersionUID. */
private static final long serialVer... |
python | def get_residue_annotations(self, seq_resnum, seqprop=None, structprop=None, chain_id=None,
use_representatives=False):
"""Get all residue-level annotations stored in the SeqProp ``letter_annotations`` field for a given residue number.
Uses the representative sequence, s... |
python | def idsKEGG(organism):
"""
Uses KEGG to retrieve all ids for a given KEGG organism
:param organism: an organism as listed in organismsKEGG()
:returns: a Pandas dataframe of with 'gene_name' and 'KEGGid'.
"""
ORG=urlopen("http://rest.kegg.jp/list/"+organism).read()
ORG=ORG.split("\n")
... |
java | public List<CmsRewriteAlias> getRewriteAliases(CmsDbContext dbc, CmsRewriteAliasFilter filter) throws CmsException {
return getVfsDriver(dbc).readRewriteAliases(dbc, filter);
} |
java | @Override
public Promise waitForServices(long timeoutMillis, Collection<String> services) {
if (services == null || services.isEmpty() || isServicesOnline(services)) {
return Promise.resolve();
}
Promise promise = new Promise();
long timeoutAt;
if (timeoutMillis > 0) {
timeoutAt = System.currentTimeMil... |
java | protected int getIntSetting(String name, int defaultValue) throws IllegalArgumentException {
if (settings.containsKey(name)) {
String value = settings.get(name).toString();
try {
return Integer.parseInt(value);
} catch (Exception e) {
throw ne... |
python | def beacon(config):
'''
Watch for changes on network settings
By default, the beacon will emit when there is a value change on one of the
settings on watch. The config also support the onvalue parameter for each
setting, which instruct the beacon to only emit if the setting changed to
the value... |
java | public final void bindUntilJavaShutdown(Duration timeout, @Nullable Consumer<DisposableServer> onStart) {
Objects.requireNonNull(timeout, "timeout");
DisposableServer facade = bindNow();
Objects.requireNonNull(facade, "facade");
if (onStart != null) {
onStart.accept(facade);
}
Runtime.getRuntime()
... |
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