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java
public ChannelBuffer formatQueryV1(final TSQuery query, final List<DataPoints[]> results, final List<Annotation> globals) { throw new BadRequestException(HttpResponseStatus.NOT_IMPLEMENTED, "The requested API endpoint has not been implemented", this.getClass().getCanonicalName() + ...
java
@Override public IRundeckProject createFrameworkProjectStrict(final String projectName, final Properties properties) { return createFrameworkProjectInt(projectName,properties,true); }
java
public OvhTask serviceName_modem_blocIp_POST(String serviceName, OvhServiceStatusEnum status) throws IOException { String qPath = "/xdsl/{serviceName}/modem/blocIp"; StringBuilder sb = path(qPath, serviceName); HashMap<String, Object>o = new HashMap<String, Object>(); addBody(o, "status", status); String resp...
python
def _ExtractList(self, fields, ignores=(",",), terminators=()): """Extract a list from the given fields.""" extracted = [] i = 0 for i, field in enumerate(fields): # Space-separated comma; ignore, but this is not a finished list. # Similar for any other specified ignores (eg, equals sign). ...
python
def mime_type(filename): """ Guess mime type for the given file name Note: this implementation uses python_magic package which is not thread-safe, as a workaround global lock is used for the ability to work in threaded environment :param filename: file name to guess :return: str """ # TODO: write lock-free mim...
java
public void addStaticElVarValue(final String name, final String value) { check(!staticElValues.containsKey(name), "Duplicate el variable %s value declaration: %s (original: %s)", name, value, staticElValues.get(name)); check(!dynamicElValues.contains(name), ...
python
def checkUpload(self, file_obj, full_path = '/', overwrite = False): """Check whether it is possible to upload a file. >>> s = nd.checkUpload('~/flower.png','/Picture/flower.png') :param file_obj: A file-like object to check whether possible to upload. You can pass a string as a file_obj o...
java
public static Controller.StreamCut decode(final String scope, final String stream, Map<Long, Long> streamCut) { return Controller.StreamCut.newBuilder().setStreamInfo(createStreamInfo(scope, stream)).putAllCut(streamCut).build(); }
java
@SuppressWarnings("nls") protected DataSource datasourceFromConfig(JdbcOptionsBean config) { Properties props = new Properties(); props.putAll(config.getDsProperties()); setConfigProperty(props, "jdbcUrl", config.getJdbcUrl()); setConfigProperty(props, "username", config.getUsername(...
python
def kde(self, name, npoints=_npoints, **kwargs): """ Calculate kernel density estimator for parameter """ data = self.get(name,**kwargs) return kde(data,npoints)
python
def reply_webapi(self, text, attachments=None, as_user=True, in_thread=None): """ Send a reply to the sender using Web API (This function supports formatted message when using a bot integration) If the message was send in a thread, answer in a thread per default...
java
@XmlElementDecl(namespace = "http://www.ibm.com/websphere/wim", name = "businessCategory") public JAXBElement<String> createBusinessCategory(String value) { return new JAXBElement<String>(_BusinessCategory_QNAME, String.class, null, value); }
python
def merge_link_object(serializer, data, instance): """Add a 'links' attribute to the data that maps field names to URLs. NOTE: This is the format that Ember Data supports, but alternative implementations are possible to support other formats. """ link_object = {} if not getattr(instance...
java
public Pairtree getPairtree(final String aBucket, final String aBucketPath) throws PairtreeException { if (myAccessKey.isPresent() && mySecretKey.isPresent()) { final String accessKey = myAccessKey.get(); final String secretKey = mySecretKey.get(); if (myRegion.isPresent()) ...
java
public void useAttachmentServiceWithWebClient() throws Exception { final String serviceURI = "http://localhost:" + port + "/services/attachments/multipart"; JSONProvider provider = new JSONProvider(); provider.setIgnoreNamespaces(true); provider.setInTransformElements(...
java
@Override public Optional<String> getMessage(final String code) { try { return Optional.of(messageSourceAccessor.getMessage(code)); } catch(NoSuchMessageException e) { return Optional.empty(); } }
java
public void attribute(String attribute, String expectedValue) { String value = checkAttribute(attribute, expectedValue, 0, 0); String reason = NO_ELEMENT_FOUND; if (value == null && getElement().is().present()) { reason = "Attribute doesn't exist"; } assertNotNull(rea...
python
def read(self, n): """Read n bytes. Returns exactly n bytes of data unless the underlying raw IO stream reaches EOF. """ buf = self._read_buf pos = self._read_pos end = pos + n if end <= len(buf): # Fast path: the data to read is fully buffere...
java
@Override public Long next() { if (!hasNext()) { throw new NoSuchElementException(toString() + " ended"); } current = next; next = next + increment; return current(); }
java
public static List<PropertyDescriptor> getPropertyDescriptorsWithGetters(final Class<?> clazz) { final List<PropertyDescriptor> relevantDescriptors = new ArrayList<PropertyDescriptor>(); final PropertyDescriptor[] propertyDescriptors = getPropertyDescriptors(clazz); if (propertyDescriptors != ...
java
public void setLocalStripedActive() throws ClientException, IOException { if (gSession.serverAddressList == null) { throw new ClientException(ClientException.CALL_PASSIVE_FIRST); } try { gLocalServer.setStripedActive(gSession.serverAddressList); ...
java
public static TransformedInputRow of(final InputRow row) { if (row instanceof TransformedInputRow) { // re-use existing transformed input row. return (TransformedInputRow) row; } else { return new TransformedInputRow(row, row.getId()); } }
python
def reload(self, reload_timeout, save_config): """Reload the device.""" PROCEED = re.compile(re.escape("Proceed with reload? [confirm]")) CONTINUE = re.compile(re.escape("Do you wish to continue?[confirm(y/n)]")) DONE = re.compile(re.escape("[Done]")) CONFIGURATION_COMPLETED = re...
java
private synchronized void createReconstituteThreadPool() { if (TraceComponent.isAnyTracingEnabled() && tc.isEntryEnabled()) SibTr.entry(tc, "createReconstituteThreadPool"); if (_reconstituteThreadpool == null) { int maxThreadPoolSize; if (messageProcesso...
python
async def save_form(self, form, request, **resources): """Save self form.""" if not self.can_create and not self.resource: raise muffin.HTTPForbidden() if not self.can_edit and self.resource: raise muffin.HTTPForbidden() resource = self.resource or self.populate...
java
@Override public void handleException(@Nullable Throwable e, boolean endApplication) { final ReportBuilder builder = new ReportBuilder(); builder.exception(e) .customData(customData); if (endApplication) { builder.endApplication(); } builder.build(...
python
def sortarai(datablock, s, Zdiff, **kwargs): """ sorts data block in to first_Z, first_I, etc. Parameters _________ datablock : Pandas DataFrame with Thellier-Tellier type data s : specimen name Zdiff : if True, take difference in Z values instead of vector difference NB: this...
python
def _trim_adapters(fastq_files, out_dir, data): """ for small insert sizes, the read length can be longer than the insert resulting in the reverse complement of the 3' adapter being sequenced. this takes adapter sequences and trims the only the reverse complement of the adapter MYSEQUENCEAAAARE...
java
public static Manifest getManifest(Location jarLocation) throws IOException { URI uri = jarLocation.toURI(); // Small optimization if the location is local if ("file".equals(uri.getScheme())) { JarFile jarFile = new JarFile(new File(uri)); try { return jarFile.getManifest(); } fin...
python
def FlagCxx11Features(filename, clean_lines, linenum, error): """Flag those c++11 features that we only allow in certain places. Args: filename: The name of the current file. clean_lines: A CleansedLines instance containing the file. linenum: The number of the line to check. error: The function to ...
python
def _create_app(self, color_depth, term='xterm'): """ Create CommandLineInterface for this client. Called when the client wants to attach the UI to the server. """ output = Vt100_Output(_SocketStdout(self._send_packet), lambda: self.size, ...
python
def _bucket_key(self): """ Returns hash bucket key for the redis key """ return "{}.size.{}".format( self.prefix, (self._hashed_key//1000) if self._hashed_key > 1000 else self._hashed_key)
java
public static ObjectInputStream newObjectInputStream(Path self, final ClassLoader classLoader) throws IOException { return IOGroovyMethods.newObjectInputStream(Files.newInputStream(self), classLoader); }
java
public void marshall(DeleteAliasRequest deleteAliasRequest, ProtocolMarshaller protocolMarshaller) { if (deleteAliasRequest == null) { throw new SdkClientException("Invalid argument passed to marshall(...)"); } try { protocolMarshaller.marshall(deleteAliasRequest.getOrg...
python
def action(method=None, **kwargs): """ Decorator that turns a function or controller method into an kervi action. it is possible to call the action in other kervi processes or modules. @action def my_action(p) ... call it via Actions["my_action"](10) @a...
java
public OperationStatusResponseInner beginDeleteInstances(String resourceGroupName, String vmScaleSetName, List<String> instanceIds) { return beginDeleteInstancesWithServiceResponseAsync(resourceGroupName, vmScaleSetName, instanceIds).toBlocking().single().body(); }
java
protected boolean checkForSignIn() { Authentication authentication = SecurityContextHolder.getContext().getAuthentication(); if ((authentication != null) && authentication.isAuthenticated()) { LOG.debug("Security context contains CAS authentication"); return true; } return false; }
python
def create_slim_mapping(self, subset=None, subset_nodes=None, relations=None, disable_checks=False): """ Create a dictionary that maps between all nodes in an ontology to a subset Arguments --------- ont : `Ontology` Complete ontology to be mapped. Assumed pre-filter...
java
private static String[] readSMARTSPattern(String filename) throws Exception { InputStream ins = StandardSubstructureSets.class.getClassLoader().getResourceAsStream(filename); BufferedReader reader = new BufferedReader(new InputStreamReader(ins)); List<String> tmp = new ArrayList<String>(); ...
python
def create_input_for_numbered_sequences(headerDir, sourceDir, containers, maxElements): """Creates additional source- and header-files for the numbered sequence MPL-containers.""" # Create additional container-list without "map". containersWithoutMap = containers[:] try: containersWithoutMap.rem...
python
def vad_filter_features(vad_labels, features, filter_frames="trim_silence"): """ Trim the spectrogram to remove silent head/tails from the speech sample. Keep all remaining frames or either speech or non-speech only @param: filter_frames: the value is either 'silence_only' (keep the speech, remove everythin...
java
public JsAPISignature createJsAPISignature(String url){ if(jsAPITicket == null || jsAPITicket.expired()) { getJsAPITicket(); } long timestamp = System.currentTimeMillis() / 1000; String nonce = RandomStringGenerator.getRandomStringByLength(16); String ticket =...
python
def connect(self): """Connect to beanstalkd server.""" self._socket = socket.socket(socket.AF_INET, socket.SOCK_STREAM) self._socket.settimeout(self._connect_timeout) SocketError.wrap(self._socket.connect, (self.host, self.port)) self._socket.settimeout(None) self._socket...
java
@Override public int compareTo(Object obj) { if (obj instanceof URI) { return this.toString().compareTo(obj.toString()); } else { return -1; } }
java
public static void writeAll(GatheringByteChannel ch, ByteBuffer[] bbs, int offset, int length) throws IOException { long all = 0; for (int ii=0;ii<length;ii++) { all += bbs[offset+ii].remaining(); } int count = 0; while (all > 0) { ...
java
@Override public Object postProcessBeforeInitialization(Object bean, String beanName) throws BeansException { if (bean instanceof IPubSub) { System.err.println("beanName:" + beanName + " bean:" + bean); Publisher.listen((IPubSub) bean, this.getRedis()); } return bean; }
python
def is_unwrapped(f): """If `f` was imported and then unwrapped, this function might return True. .. |is_unwrapped| replace:: :py:func:`is_unwrapped`""" try: g = look_up(object_name(f)) return g != f and unwrap(g) == f except (AttributeError, TypeError, ImportError): return Fals...
java
public NotificationWithSubscribers withSubscribers(Subscriber... subscribers) { if (this.subscribers == null) { setSubscribers(new java.util.ArrayList<Subscriber>(subscribers.length)); } for (Subscriber ele : subscribers) { this.subscribers.add(ele); } ret...
python
def do_printActivity(self,args): """Print scaling activity details""" parser = CommandArgumentParser("printActivity") parser.add_argument(dest='index',type=int,help='refresh'); args = vars(parser.parse_args(args)) index = args['index'] activity = self.activities[index] ...
java
protected void configureSecurity(final T builder, final String name) { final GrpcChannelProperties properties = getPropertiesFor(name); final Security security = properties.getSecurity(); if (properties.getNegotiationType() != NegotiationType.TLS // non-default || isNonNullAndNo...
python
def _create_genome_regions(data): """Create whole genome contigs we want to process, only non-alts. Skips problem contigs like HLAs for downstream analysis. """ work_dir = utils.safe_makedir(os.path.join(dd.get_work_dir(data), "coverage", dd.get_sample_name(data))) variant_regions = os.path.join(wo...
java
@Override public void clearCache() { entityCache.clearCache(CommerceUserSegmentCriterionImpl.class); finderCache.clearCache(FINDER_CLASS_NAME_ENTITY); finderCache.clearCache(FINDER_CLASS_NAME_LIST_WITH_PAGINATION); finderCache.clearCache(FINDER_CLASS_NAME_LIST_WITHOUT_PAGINATION); }
python
def _stacklevel_above_module(mod_name): """ Return the stack level (with 1 = caller of this function) of the first caller that is not defined in the specified module (e.g. "pywbem.cim_obj"). The returned stack level can be used directly by the caller of this function as an argument for the stacklev...
python
def get_dicts_generator(word_min_freq=4, char_min_freq=2, word_ignore_case=False, char_ignore_case=False): """Get word and character dictionaries from sentences. :param word_min_freq: The minimum frequency of a word. :param char_min_fr...
java
public String getPrototypeName() { String name = getClass().getName(); if (name.startsWith(ORG_GEOMAJAS)) { name = name.substring(ORG_GEOMAJAS.length()); } name = name.replace(".dto.", ".impl."); return name.substring(0, name.length() - 4) + "Impl"; }
java
public FixedDelayBuilder<P> delay(String... delays) { for (String d : delays) { if (d != null) { delayProps.add(d); } } return this; }
python
def _merge_cfgnodes(self, cfgnode_0, cfgnode_1): """ Merge two adjacent CFGNodes into one. :param CFGNode cfgnode_0: The first CFGNode. :param CFGNode cfgnode_1: The second CFGNode. :return: None """ assert cfgnode_0.addr + cfgnode_0.size ...
java
@SuppressWarnings("unchecked") public <T> Http2StreamChannelBootstrap attr(AttributeKey<T> key, T value) { if (key == null) { throw new NullPointerException("key"); } if (value == null) { synchronized (attrs) { attrs.remove(key); } ...
python
def get_available_palettes(chosen_palette): ''' Given a chosen palette, returns tuple of those available, or None when not found. Because palette support of a particular level is almost always a superset of lower levels, this should return all available palettes. Returns: ...
python
def is_locked(self, request: AxesHttpRequest, credentials: dict = None) -> bool: """ Checks if the request or given credentials are locked. """ if settings.AXES_LOCK_OUT_AT_FAILURE: return self.get_failures(request, credentials) >= settings.AXES_FAILURE_LIMIT return...
python
def optimizer_step(self, batch_info, device, model, rollout): """ Single optimization step for a model """ batch_info.optimizer.zero_grad() batch_result = self.calculate_gradient(batch_info=batch_info, device=device, model=model, rollout=rollout) clip_gradients(batch_result, model, sel...
java
@Deprecated public static Class<?> getRawType(Type type) { if (type instanceof Class) { return (Class<?>) type; } else if (type instanceof ParameterizedType) { return getRawType(((ParameterizedType) type).getRawType()); } else if (type instanceof TypeVariable<?>) { return getRawType(((TypeVariable<?>) t...
python
def get_composition(source, *fxns): """Compose several extractors together, on a source.""" val = source for fxn in fxns: val = fxn(val) return val
java
@GET @Path("/validate/{token}") @Produces(MediaType.APPLICATION_JSON) public Response validateAccount(@PathParam("token") String token) { try{ if (authServerLogic.validateAccount(token)) { return Response.ok().build(); } else { return Response....
python
def compare_datetimes(d1, d2): """ Compares two datetimes safely, whether they are timezone-naive or timezone-aware. If either datetime is naive it is converted to an aware datetime assuming UTC. Args: d1: first datetime. d2: second datetime. Returns: -1 if d1 < d2, 0 if they are the same, or +1 ...
python
def get_included_resources(request, serializer=None): """ Build a list of included resources. """ include_resources_param = request.query_params.get('include') if request else None if include_resources_param: return include_resources_param.split(',') else: return get_default_included_res...
java
public Subscription getSubscriptionFromRequest(HttpServletRequest request) { String tokenHeader = request.getHeader("Authorization"); if (tokenHeader == null || tokenHeader.indexOf("Token ") != 0) { LOG.info("Empty authorizationheader, or header does not start with 'Token ': " + tokenHeader); return null; ...
java
public static String getResponseCacheHeaderSettings(final String contentType) { String parameter = MessageFormat.format(RESPONSE_CACHE_HEADER_SETTINGS, contentType); return get().getString(parameter); }
python
def close(self): """ Closes the object. """ if self._is_open: self.mode = None if self.handle: self.handle.close() self.handle = None self.filename = None self._is_open = False self.status = None
java
public void update(String server, Transaction t, boolean deleteMissingChildren) { on(server).update(t, deleteMissingChildren); }
java
public AbstractSheet<TRow, TColumn, TCell> setColumns(List<TColumn> columns) { this.columns = columns; return this; }
java
@SafeVarargs public static <T> void split(T[] src, T[]... parts) { int srcPos = 0; for (T[] dest : parts) { System.arraycopy(src, srcPos, dest, 0, dest.length); srcPos += dest.length; } }
python
def transaction_retry(max_retries=1): """Decorator for methods doing database operations. If the database operation fails, it will retry the operation at most ``max_retries`` times. """ def _outer(fun): @wraps(fun) def _inner(*args, **kwargs): _max_retries = kwargs.pop...
python
def get_context_data(self, **kwargs): """Returns the template context, including the workflow class. This method should be overridden in subclasses to provide additional context data to the template. """ context = super(WorkflowView, self).get_context_data(**kwargs) work...
python
def list_launch_configurations(region=None, key=None, keyid=None, profile=None): ''' List all Launch Configurations. CLI example:: salt myminion boto_asg.list_launch_configurations ''' ret = get_all_launch_configurations(region, key, keyid, profile) retu...
python
def cmd_output_add(self, args): '''add new output''' device = args[0] print("Adding output %s" % device) try: conn = mavutil.mavlink_connection(device, input=False, source_system=self.settings.source_system) conn.mav.srcComponent = self.settings.source_component ...
python
def detector(detector_type): """ Returns a detector of the specified type. """ if detector_type == 'point_cloud_box': return PointCloudBoxDetector() elif detector_type == 'rgbd_foreground_mask_query': return RgbdForegroundMaskQueryImageDetector() elif detector_typ...
python
def mutant_charts_for_feature(example_protos, feature_name, serving_bundles, viz_params): """Returns JSON formatted for rendering all charts for a feature. Args: example_proto: The example protos to mutate. feature_name: The string feature name to mutate. serving_bundles: ...
python
def updateSeriesAttributes(request): ''' This function handles the filtering of available series classes and seriesteachers when a series is chosen on the Substitute Teacher reporting form. ''' if request.method == 'POST' and request.POST.get('event'): series_option = request.POST.get(...
java
private final int m() { int n = 0; int i = k0; while (true) { if (i > j) return n; if (!cons(i)) break; i++; } i++; while (true) { while (true) { if (i > j) return n; if (cons(i)) break; i++; } i++; n++; while (true) { if (i > j) return n; i...
java
public void eInit(XtendTypeDeclaration container, String name, String modifier, IJvmTypeProvider context) { setTypeResolutionContext(context); if (this.sarlField == null) { this.container = container; this.sarlField = SarlFactory.eINSTANCE.createSarlField(); this.sarlField.setAnnotationInfo(XtendFactory.eI...
python
def search_raw(self, query, indices=None, doc_types=None, headers=None, **query_params): """Execute a search against one or more indices to get the search hits. `query` must be a Search object, a Query object, or a custom dictionary of search parameters using the query DSL to be passed ...
python
def _check_submodule_status(root, submodules): """check submodule status Has three return values: 'missing' - submodules are absent 'unclean' - submodules have unstaged changes 'clean' - all submodules are up to date """ if hasattr(sys, "frozen"): # frozen via py2exe or similar, don...
java
public static ExpectationFailed of(Throwable cause) { if (_localizedErrorMsg()) { return of(cause, defaultMessage(EXPECTATION_FAILED)); } else { touchPayload().cause(cause); return _INSTANCE; } }
python
def voight_painting(h): """Paint haplotypes, assigning a unique integer to each shared haplotype prefix. Parameters ---------- h : array_like, int, shape (n_variants, n_haplotypes) Haplotype array. Returns ------- painting : ndarray, int, shape (n_variants, n_haplotypes) ...
python
def _list_superclasses(class_def): """Return a list of the superclasses of the given class""" superclasses = class_def.get('superClasses', []) if superclasses: # Make sure to duplicate the list return list(superclasses) sup = class_def.get('superClass', None) if sup: return ...
java
public List<File> scan(Resource resource) { Scanner scanner = buildContext.newScanner(new File(resource.getDirectory()), true); setupScanner(scanner, resource); scanner.scan(); List<File> files = new ArrayList<File>(); for (String file : scanner.getIncludedFiles()) { ...
java
public static CProduct[] findByGroupId_PrevAndNext(long CProductId, long groupId, OrderByComparator<CProduct> orderByComparator) throws com.liferay.commerce.product.exception.NoSuchCProductException { return getPersistence() .findByGroupId_PrevAndNext(CProductId, groupId, orderByComparator); }
python
def set_target(self, target: EventDispatcherBase) -> None: """ This method should be called by the event dispatcher that dispatches this event to set its target property. Args: target (EventDispatcherBase): The event dispatcher that will dispatch this event. ...
java
public boolean eq(LongIntSortedVector other) { // This is slow, but correct. LongIntSortedVector v1 = LongIntSortedVector.getWithNoZeroValues(this); LongIntSortedVector v2 = LongIntSortedVector.getWithNoZeroValues(other); if (v2.size() != v1.size()) { return ...
java
public final String getLikelyEndContextMismatchCause(SanitizedContentKind contentKind) { Preconditions.checkArgument(!isValidEndContextForContentKind(contentKind)); if (contentKind == SanitizedContentKind.ATTRIBUTES) { // Special error message for ATTRIBUTES since it has some specific logic. return ...
java
public <T> T doAs(PrivilegedAction<T> action) { return Subject.doAs(null, action); }
java
public Javalin start() { Util.logJavalinBanner(this.config.showJavalinBanner); JettyUtil.disableJettyLogger(); long startupTimer = System.currentTimeMillis(); if (server.getStarted()) { throw new IllegalStateException("Cannot call start() again on a started server."); ...
python
def orthonormal_initializer(output_size, input_size, debug=False): """adopted from Timothy Dozat https://github.com/tdozat/Parser/blob/master/lib/linalg.py Parameters ---------- output_size : int input_size : int debug : bool Whether to skip this initializer Returns ------- ...
python
def getRaw(self, instance, **kwargs): """Returns raw field value (possible wrapped in BaseUnit) """ value = ObjectField.get(self, instance, **kwargs) # getattr(instance, "Remarks") returns a BaseUnit if callable(value): value = value() return value
python
def append(self, new_points_len): '''Allocate memory for a new run and return a reference to that memory wrapped in an array of size ``(new_points_len, self.dim)``. :param new_points_len: Integer; the number of points to be stored in the target memory. ''' new_poin...
java
public static PluginSpec readPluginSpecFile(URL pluginSpec) throws IOException { return (PluginSpec) mapper.reader(PluginSpec.class).readValue(pluginSpec); }
java
public int deleteByTableName(String tableName) throws SQLException { DeleteBuilder<Extensions, Void> db = deleteBuilder(); db.where().eq(Extensions.COLUMN_TABLE_NAME, tableName); int deleted = db.delete(); return deleted; }
python
def lcopt_bw2_forwast_setup(use_autodownload=True, forwast_path=None, db_name=FORWAST_PROJECT_NAME, overwrite=False): """ Utility function to set up brightway2 to work correctly with lcopt using the FORWAST database instead of ecoinvent By default it'll try and download the forwast database as a ....
python
def dict_find_keys(dict_, val_list): r""" Args: dict_ (dict): val_list (list): Returns: dict: found_dict CommandLine: python -m utool.util_dict --test-dict_find_keys Example: >>> # ENABLE_DOCTEST >>> from utool.util_dict import * # NOQA >>>...