language stringclasses 2
values | func_code_string stringlengths 63 466k |
|---|---|
java | public SftpFileAttributes get(String path, FileTransferProgress progress)
throws FileNotFoundException, SftpStatusException, SshException,
TransferCancelledException {
return get(path, progress, false);
} |
java | public Observable<ServerVulnerabilityAssessmentInner> createOrUpdateAsync(String resourceGroupName, String serverName, ServerVulnerabilityAssessmentInner parameters) {
return createOrUpdateWithServiceResponseAsync(resourceGroupName, serverName, parameters).map(new Func1<ServiceResponse<ServerVulnerabilityAssess... |
python | def _ensure_array_list(arrays):
"""Ensures that every element in a list is an instance of a numpy array."""
# Note: the isinstance test is needed below so that instances of FieldArray
# are not converted to numpy arrays
return [numpy.array(arr, ndmin=1) if not isinstance(arr, numpy.ndarray)
... |
python | def get_queryset(self):
"""
We just ensure preferences are actually populated before fetching
from db
"""
self.init_preferences()
queryset = super(PreferenceViewSet, self).get_queryset()
section = self.request.query_params.get('section')
if section:
... |
python | def multithread_predict_dataflow(dataflows, model_funcs):
"""
Running multiple `predict_dataflow` in multiple threads, and aggregate the results.
Args:
dataflows: a list of DataFlow to be used in :func:`predict_dataflow`
model_funcs: a list of callable to be used in :func:`predict_dataflow`... |
python | def _binary_search(f, xmin, xmax, eps=1e-9):
"""Return the largest x such f(x) is True."""
middle = (xmax + xmin) / 2.
while xmax - xmin > eps:
assert xmin < xmax
middle = (xmax + xmin) / 2.
if f(xmax):
return xmax
if not f(xmin):
return xmin
i... |
java | private Integer resolveStageOrder(long pipelineId, String stageName) {
Integer order = getStageOrderInPipeline(pipelineId, stageName);
if (order == null) {
order = getMaxStageOrderInPipeline(pipelineId) + 1;
}
return order;
} |
python | def list_configs():
'''
List all available configs
CLI example:
.. code-block:: bash
salt '*' snapper.list_configs
'''
try:
configs = snapper.ListConfigs()
return dict((config[0], config[2]) for config in configs)
except dbus.DBusException as exc:
raise Com... |
java | public QueryResults<Key> newKeyQuery(String kind) {
// [START newKeyQuery]
Query<Key> query = Query.newKeyQueryBuilder().setKind(kind).build();
QueryResults<Key> results = datastore.run(query);
// Use results
// [END newKeyQuery]
return results;
} |
python | def create_deep_link_url(self, data=None, alias=None, type=0, duration=None, identity=None, tags=None,
campaign=None, feature=None, channel=None, stage=None, skip_api_call=False):
"""
Creates a deep linking url
See the URL https://dev.branch.io/references/http_api/#... |
python | def postponed_from(self):
"""
Date that the event was postponed from (in the local time zone).
"""
fromDate = getLocalDate(self.except_date, self.time_from, self.tz)
return dateFormat(fromDate) |
python | def to_phonetics(self):
"""
Transcribing words in verse helps find alliteration.
"""
if len(self.long_lines) == 0:
logger.error("No text was imported")
self.syllabified_text = []
else:
transcriber = Transcriber(DIPHTHONGS_IPA, DIPHTHONGS_IPA_cl... |
java | public SAXRecords ts2saxViaWindowSkipping(double[] ts, int windowSize, int paaSize, double[] cuts,
NumerosityReductionStrategy strategy, double nThreshold, ArrayList<Integer> skips)
throws SAXException {
// the resulting data structure init
//
SAXRecords saxFrequencyData = new SAXRecords(... |
python | def reduce(self, dimensions=None, function=None, **reduce_map):
"""
Reduces the Raster using functions provided via the
kwargs, where the keyword is the dimension to be reduced.
Optionally a label_prefix can be provided to prepend to
the result Element label.
"""
... |
python | def arc(pRA, pDecl, sRA, sDecl, mcRA, lat):
""" Returns the arc of direction between a Promissor
and Significator. It uses the generic proportional
semi-arc method.
"""
pDArc, pNArc = utils.dnarcs(pDecl, lat)
sDArc, sNArc = utils.dnarcs(sDecl, lat)
# Select meridian and arcs to b... |
python | def module(self):
"""The module in which the Rule is defined.
Python equivalent of the CLIPS defrule-module command.
"""
modname = ffi.string(lib.EnvDefruleModule(self._env, self._rule))
defmodule = lib.EnvFindDefmodule(self._env, modname)
return Module(self._env, defm... |
python | def SAMflags(x):
"""
Explains a SAM flag.
:param x: flag
:returns: complete SAM flag explanaition
"""
flags=[]
if x & 1:
l="1: Read paired"
else:
l="0: Read unpaired"
flags.append(l)
if x & 2 :
l="1: Read mapped in proper pair"
else:
l="0: ... |
python | def rt_update(self, statement, linenum, mode, xparser):
"""Uses the specified line parser to parse the given line.
:arg statement: a string of lines that are part of a single statement.
:arg linenum: the line number of the first line in the list relative to
the entire module contents.... |
java | @Override
public ListTagsForResourcesResult listTagsForResources(ListTagsForResourcesRequest request) {
request = beforeClientExecution(request);
return executeListTagsForResources(request);
} |
java | private String ltrim(final String s) {
for (int i = 0; i < s.length(); i++) {
if (s.charAt(i) != ' ') {
return s.substring(i);
}
}
return s;
} |
java | public AbstractThinTableModel getModel(JTable table)
{
AbstractThinTableModel model = null;
if (table != null)
model = (AbstractThinTableModel)table.getModel();
return model;
} |
python | def _ir_calibrate(header, data, irchn, calib_type, mask=False):
"""IR calibration
*calib_type* in brightness_temperature, radiance, count
"""
count = data["hrpt"][:, :, irchn + 2].astype(np.float)
if calib_type == 0:
return count
# Mask unnaturally low values
mask |= count == 0.0
... |
python | def escape_filename_sh(name):
"""Return a hopefully safe shell-escaped version of a filename."""
# check whether we have unprintable characters
for ch in name:
if ord(ch) < 32:
# found one so use the ansi-c escaping
return escape_filename_sh_ansic(name)
# all printable ... |
python | def channels_voice_phone_number_show(self, id, **kwargs):
"https://developer.zendesk.com/rest_api/docs/voice-api/phone_numbers#show-phone-number"
api_path = "/api/v2/channels/voice/phone_numbers/{id}.json"
api_path = api_path.format(id=id)
return self.call(api_path, **kwargs) |
java | public int write(long pos, byte[] b, int off, int len) throws IOException {
prepareForWrite(pos, len);
if (len == 0) {
return 0;
}
int remaining = len;
int blockIndex = blockIndex(pos);
byte[] block = blocks[blockIndex];
int offInBlock = offsetInBlock(pos);
int written = put(bl... |
java | private static <S, L> void updateBlockReferences(Block<S, L> block) {
UnorderedCollection<State<S, L>> states = block.getStates();
for (ElementReference ref : states.references()) {
State<S, L> state = states.get(ref);
state.setBlockReference(ref);
state.setBlock(bloc... |
java | @Override
public Description matchMethod(MethodTree tree, VisitorState state) {
MethodSymbol methodSym = ASTHelpers.getSymbol(tree);
// precondition (1)
if (!methodSym.getModifiers().contains(Modifier.PRIVATE)) {
return Description.NO_MATCH;
}
ImmutableList<Tree> params =
tree.get... |
python | def recursively_preempt_states(self):
""" Preempt the state and all of it child states.
"""
super(ContainerState, self).recursively_preempt_states()
# notify the transition condition variable to let the state instantaneously stop
self._transitions_cv.acquire()
self._trans... |
python | def list_users(order_by='id'):
'''
Show all users for this company.
CLI Example:
salt myminion bamboohr.list_users
By default, the return data will be keyed by ID. However, it can be ordered
by any other field. Keep in mind that if the field that is chosen contains
duplicate values (i... |
python | def add(self, rule: ControlRule = None, *, supply: float):
"""
Register a new rule above a given ``supply`` threshold
Registration supports a single-argument form for use as a decorator,
as well as a two-argument form for direct application.
Use the former for ``def`` or ``class... |
python | def annotate(data, image_column=None, annotation_column='annotations'):
"""
Annotate your images loaded in either an SFrame or SArray Format
The annotate util is a GUI assisted application used to create labels in
SArray Image data. Specifying a column, with dtype Image, in an SFrame
... |
java | public static cmpaction[] get(nitro_service service, options option) throws Exception{
cmpaction obj = new cmpaction();
cmpaction[] response = (cmpaction[])obj.get_resources(service,option);
return response;
} |
python | def do_time(self, params):
"""
\x1b[1mNAME\x1b[0m
time - Measures elapsed seconds after running commands
\x1b[1mSYNOPSIS\x1b[0m
time <cmd1> <cmd2> ... <cmdN>
\x1b[1mEXAMPLES\x1b[0m
> time 'loop 10 0 "create /foo_ bar ephemeral=false sequence=true"'
Took 0.05585 seconds
... |
java | @Override
public final void afterPropertiesSet() throws Exception {
if (this.getLocator() != null) {
this.logger.warn(
"Static "
+ this.getClass().getName()
+ " reference has already been set and setInstance is being cal... |
java | public boolean isReallocationRequired()
{
if (TraceComponent.isAnyTracingEnabled() && tc.isEntryEnabled())
{
SibTr.entry(this, tc, "isReallocationRequired");
SibTr.exit(tc, "isReallocationRequired", Boolean.valueOf(reallocateOnCommit));
}
return reallocateOnCommit;
} |
java | public void setResourceGroupArns(java.util.Collection<String> resourceGroupArns) {
if (resourceGroupArns == null) {
this.resourceGroupArns = null;
return;
}
this.resourceGroupArns = new java.util.ArrayList<String>(resourceGroupArns);
} |
python | def on_message(self, message):
"""Listens for a "websocket client ready" message.
Once that message is received an asynchronous job
is stated that yields messages to the client.
These messages make up salt's
"real time" event stream.
"""
log.debug('Got websocket m... |
java | @Deprecated
public static <T extends Comparable<?>> TimeTemplate<T> timeTemplate(Class<? extends T> cl,
String template, ImmutableList<?> args) {
return timeTemplate(cl, createTemplate(template), args);
} |
python | def entities(self, name_id):
""" Returns all the entities of assertions for a subject, disregarding
whether the assertion still is valid or not.
:param name_id: The subject identifier, a NameID instance
:return: A possibly empty list of entity identifiers
"""
cni = code(... |
java | public InsertAllResponse insert(
Iterable<InsertAllRequest.RowToInsert> rows,
boolean skipInvalidRows,
boolean ignoreUnknownValues)
throws BigQueryException {
InsertAllRequest request =
InsertAllRequest.newBuilder(getTableId(), rows)
.setSkipInvalidRows(skipInvalidRows)
... |
python | def _removeSingleMemberGroupReferences(kerning, leftGroups, rightGroups):
"""
Translate group names into glyph names in pairs
if the group only contains one glyph.
"""
new = {}
for (left, right), value in kerning.items():
left = leftGroups.get(left, left)
right = rightGroups.get(... |
python | def update_store_credit_by_id(cls, store_credit_id, store_credit, **kwargs):
"""Update StoreCredit
Update attributes of StoreCredit
This method makes a synchronous HTTP request by default. To make an
asynchronous HTTP request, please pass async=True
>>> thread = api.update_store... |
python | def calculate_ef_covar(ef_structure1, ef_structure2):
"""
determine the active and decoy covariance of the enrichment factors, covara, and covard, respectively.
:param efstructure_1: list [(id, best_score, best_query, status, gamma), ...,]
:param ef_structure2: list [(id, best_score, best_query, status,... |
python | def prt_objdesc(self, prt):
"""Return description of this GoSubDag object."""
txt = "INITIALIZING GoSubDag: {N:3} sources in {M:3} GOs rcnt({R}). {A} alt GO IDs\n"
alt2obj = {go:o for go, o in self.go2obj.items() if go != o.id}
prt.write(txt.format(
N=len(self.go_sources),
... |
java | protected void setStream(
int priority,
Reliability reliability,
Stream stream) throws SIResourceException
{
if (TraceComponent.isAnyTracingEnabled() && tc.isEntryEnabled())
SibTr.entry(
tc,
"setStream",
new Object[] { new Integer(priority), reliability, stream });
... |
python | def im_open(self, room_id, **kwargs):
"""Adds the direct message back to the user’s list of direct messages."""
return self.__call_api_post('im.open', roomId=room_id, kwargs=kwargs) |
python | def delete_file(f, ignore_errors=False):
"""
delete a single file
"""
try:
os.remove(f)
except Exception as ex:
if ignore_errors:
return
print('ERROR deleting file ' + str(ex)) |
python | def add_device_callback(self, devices, callback):
"""Register a device callback."""
if not devices:
return False
if not isinstance(devices, (tuple, list)):
devices = [devices]
for device in devices:
# Device may be a device_id
device_id =... |
python | def ensure_wide_weights_is_1D_or_2D_ndarray(wide_weights):
"""
Ensures that `wide_weights` is a 1D or 2D ndarray. Raises a helpful
ValueError if otherwise.
"""
if not isinstance(wide_weights, np.ndarray):
msg = "wide_weights MUST be a ndarray."
raise ValueError(msg)
ndim = wide_w... |
python | def get_all_units(self, params=None):
"""
Get all units
This will iterate over all pages until it gets all elements.
So if the rate limit exceeded it will throw an Exception and you will get nothing
:param params: search params
:return: list
"""
if not pa... |
java | @Nullable
public static Byte parseByteObj (@Nullable final String sStr)
{
return parseByteObj (sStr, DEFAULT_RADIX, null);
} |
java | @Override
public DeleteGameSessionQueueResult deleteGameSessionQueue(DeleteGameSessionQueueRequest request) {
request = beforeClientExecution(request);
return executeDeleteGameSessionQueue(request);
} |
java | public WebServiceTemplateBuilder messageSenders(
WebServiceMessageSender... messageSenders) {
Assert.notNull(messageSenders, "MessageSenders must not be null");
return messageSenders(Arrays.asList(messageSenders));
} |
java | public java.util.List<String> getDeploymentIds() {
if (deploymentIds == null) {
deploymentIds = new com.amazonaws.internal.SdkInternalList<String>();
}
return deploymentIds;
} |
python | def _get_support_sound_mode_avr(self):
"""
Get if sound mode is supported from device.
Method queries device via HTTP.
Returns "True" if sound mode supported and "False" if not.
This method is for pre 2016 AVR(-X) devices
"""
# Set sound mode tags to be checked i... |
java | private void initStreamSource(InstanceStream stream) {
if (stream instanceof AbstractOptionHandler) {
((AbstractOptionHandler) (stream)).prepareForUse();
}
this.streamSource = new StreamSource(stream);
firstInstance = streamSource.nextInstance().getData();
} |
java | public String getAction() {
if (action == null) {
HelpModule module = HelpModule.getModule(id);
action = module == null ? ""
: "groovy:" + CareWebUtil.class.getName() + ".showHelpTopic(\"" + id + "\",\""
+ (topic == null ? "" : topic) + "\"... |
python | def _new_cls_attr(self, clazz, name, cls=None, mult=MULT_ONE, cont=True,
ref=False, bool_assignment=False, position=0):
"""Creates new meta attribute of this class."""
attr = MetaAttr(name, cls, mult, cont, ref, bool_assignment,
position)
clazz._tx_a... |
java | @BetaApi
public final Operation deleteSubnetwork(ProjectRegionSubnetworkName subnetwork) {
DeleteSubnetworkHttpRequest request =
DeleteSubnetworkHttpRequest.newBuilder()
.setSubnetwork(subnetwork == null ? null : subnetwork.toString())
.build();
return deleteSubnetwork(request... |
java | public static br_enable[] enable(nitro_service client, br_enable[] resources) throws Exception
{
if(resources == null)
throw new Exception("Null resource array");
if(resources.length == 1)
return ((br_enable[]) resources[0].perform_operation(client, "enable"));
return ((br_enable[]) perfo... |
python | def get_style_attribute(style_attribute, html_element):
'''
::param: style_directive \
The attribute value of the given style sheet.
Example: display: none
::param: html_element: \
The HtmlElement to which the given style is applied
::returns:
... |
java | public Observable<ServiceResponse<String>> cloneWithServiceResponseAsync(UUID appId, String versionId, String version) {
if (this.client.endpoint() == null) {
throw new IllegalArgumentException("Parameter this.client.endpoint() is required and cannot be null.");
}
if (appId == null) ... |
java | public void close(String nodeID) {
SendBuffer buffer;
synchronized (buffers) {
buffer = buffers.remove(nodeID);
}
if (buffer != null) {
buffer.close();
}
} |
python | def _get_nds2_name(channel):
"""Returns the NDS2-formatted name for a channel
Understands how to format NDS name strings from
`gwpy.detector.Channel` and `nds2.channel` objects
"""
if hasattr(channel, 'ndsname'): # gwpy.detector.Channel
return channel.ndsname
if hasattr(channel, 'chann... |
java | public void addAvailableLocale(String localeName) {
Locale locale = getLocale(localeName);
// add full variation (language / country / variant)
if (!m_availableLocales.contains(locale)) {
m_availableLocales.add(locale);
if (CmsLog.INIT.isInfoEnabled()) {
... |
java | public NotificationChain basicSetBooleanParameter(BooleanParameterType newBooleanParameter, NotificationChain msgs) {
return ((FeatureMap.Internal)getMixed()).basicAdd(BpsimPackage.Literals.DOCUMENT_ROOT__BOOLEAN_PARAMETER, newBooleanParameter, msgs);
} |
python | def create_queue_wrapper(name, queue_size, fed_arrays, data_sources, *args, **kwargs):
"""
Arguments
name: string
Name of the queue
queue_size: integer
Size of the queue
fed_arrays: list
array names that will be fed by this queue
data_sources: ... |
python | def strip_context_items(self, a_string):
"""Strip Juniper-specific output.
Juniper will also put a configuration context:
[edit]
and various chassis contexts:
{master:0}, {backup:1}
This method removes those lines.
"""
strings_to_strip = [
r... |
java | @Override
public ResourceSchema getSchema(String location, Job job) throws IOException {
ResourceSchema rs = new ResourceSchema();
List<ResourceFieldSchema> fieldSchemaList = new ArrayList<>();
for (String fieldName : requestedFields) {
ResourceFieldSchema rfs = new ResourceFiel... |
python | def __setup_native_run(self):
# These options are appended to mounted volume arguments
# NOTE: This tells Docker to re-label the directory for compatibility
# with SELinux. See `man docker-run` for more information.
self.vol_opts = ['z']
# Pass variables to scubainit
se... |
python | def current_jobs(self):
"""
Returns a snapshot of the Jobs that are currently being processed by the
ThreadPool. These jobs can not be found in the #pending_jobs() list.
"""
jobs = []
with synchronized(self.__queue):
for worker in self.__threads:
with synchronized(worker):
... |
java | public void Intersect( CalendarPeriod pPeriod )
{
if( (days != null) && (pPeriod.getDays() != null) )
{
for( int i = 0; i < 7; i++ )
if( days.getDay( i ).get() + pPeriod.getDays().getDay( i ).get() >= 2 )
days.getDay( i ).set();
else
days.getDay( i ).reset();
return;
}
// if one of the... |
python | def _set_src_vtep_ip(self, v, load=False):
"""
Setter method for src_vtep_ip, mapped from YANG variable /overlay/access_list/type/vxlan/standard/seq/src_vtep_ip (inet:ipv4-address)
If this variable is read-only (config: false) in the
source YANG file, then _set_src_vtep_ip is considered as a private
... |
java | private void setActiveCenters(IAtomContainer reactant) throws CDKException {
Iterator<IAtom> atomis = reactant.atoms().iterator();
while (atomis.hasNext()) {
IAtom atomi = atomis.next();
if (atomi.getFormalCharge() == 0 && reactant.getConnectedSingleElectronsCount(atomi) == 0
... |
python | def get_review_sh(self, revision, item):
""" Add sorting hat enrichment fields for the author of the revision """
identity = self.get_sh_identity(revision)
update = parser.parse(item[self.get_field_date()])
erevision = self.get_item_sh_fields(identity, update)
return erevision |
python | def remove_from_group(self, group, user):
"""
Remove a user from a group
:type user: str
:param user: User's email
:type group: str
:param group: Group name
:rtype: dict
:return: an empty dictionary
"""
data = {'group': group, 'user': us... |
python | def _update_from_pb(self, instance_pb):
"""Refresh self from the server-provided protobuf.
Helper for :meth:`from_pb` and :meth:`reload`.
"""
if not instance_pb.display_name: # Simple field (string)
raise ValueError("Instance protobuf does not contain display_name")
... |
java | public static void removeDisablingOverlay(Element element) {
List<Element> overlays = CmsDomUtil.getElementsByClass(
I_CmsLayoutBundle.INSTANCE.generalCss().disablingOverlay(),
Tag.div,
element);
if (overlays == null) {
return;
}
for (Elem... |
python | def execute_command(self, command, args=None):
"""
Execute a command
:param command: name of the command
:type command: str
:param args: optional named arguments for command
:type args: dict
:return: the result of command
:raises KeyError: if command is n... |
java | public static void destroy(final Resource... resources)
{
for (Resource r : resources) {
if (r != null) {
r.destroy();
}
}
} |
python | def save(self, *args, **kwargs):
"""Saves changes made on model instance if ``request`` or
``track_token`` keyword are provided.
"""
from tracked_model.models import History, RequestInfo
if self.pk:
action = ActionType.UPDATE
changes = None
else:
... |
python | def _filter_list(input_list, search_key, search_value):
'''
Filters a list of dictionary by a set of key-value pair.
:param input_list: is a list of dictionaries
:param search_key: is the key we are looking for
:param search_value: is the value we are looking for the key specified in search_ke... |
python | def _is_finished_dumping_checkpoint(directory):
"""Recent versions of RTA (1.10 or better), write the complete file.
This is the most straightforward source but as of 1.10 still does not
work correctly as the file will be created at the end of Read 1 even
if there are multiple reads.
"""
check_... |
java | public CommandLine setUnmatchedOptionsArePositionalParams(boolean newValue) {
getCommandSpec().parser().unmatchedOptionsArePositionalParams(newValue);
for (CommandLine command : getCommandSpec().subcommands().values()) {
command.setUnmatchedOptionsArePositionalParams(newValue);
}
... |
java | private final static int difference(int seq1, int seq2, int maxSequence) {
int diff = seq1 - seq2;
if (Math.abs(diff) <= maxSequence / 2)
return diff;
else
return (-Integer.signum(diff) * maxSequence) + diff;
} |
python | def write_lockfile(self, content):
"""Write out the lockfile.
"""
s = self._lockfile_encoder.encode(content)
open_kwargs = {"newline": self._lockfile_newlines, "encoding": "utf-8"}
with vistir.contextmanagers.atomic_open_for_write(
self.lockfile_location, **open_kwarg... |
java | public void setListener(T listener) {
Assert.notNull(listener, "Listener must not be null");
Assert.isTrue(isSupportedType(listener), "Listener is not of a supported type");
this.listener = listener;
} |
java | public void openCloseElement(String elementName) throws IOException {
assert(elementNames.size() > 0);
assert(elementNames.get(elementNames.size() - 1).equals(elementName));
writer.write("/>\n");
removeElementName(elementName);
} |
python | def delete(self, path, recursive=True):
"""
Delete ``path``.
:type path: str
:param path: the path of the file or directory
:type recursive: bool
:param recursive: if ``path`` is a directory, delete it recursively
when :obj:`True`
:raises: :exc:`~except... |
java | public OvhOrder hosting_web_serviceName_changeMainDomain_duration_POST(String serviceName, String duration, String domain, OvhMxPlanEnum mxplan) throws IOException {
String qPath = "/order/hosting/web/{serviceName}/changeMainDomain/{duration}";
StringBuilder sb = path(qPath, serviceName, duration);
HashMap<String... |
python | def set_points(self, pt1, pt2):
"""Reset the rectangle coordinates."""
(x1, y1) = pt1.as_tuple()
(x2, y2) = pt2.as_tuple()
self.left = min(x1, x2)
self.top = min(y1, y2)
self.right = max(x1, x2)
self.bottom = max(y1, y2) |
java | protected void processNoPrimaryReference(APMSpanBuilder builder, TraceRecorder recorder, ContextSampler sampler) {
// No primary reference found, so means that all references will be treated
// as equal, to provide a join construct within a separate fragment.
initTopLevelState(this, recorder, sa... |
python | def notice(self, target, msg):
"""
Sends a NOTICE to an user or channel.
:param target: user or channel to send to.
:type target: str
:param msg: message to send.
:type msg: basestring
"""
self.cmd(u'NOTICE', u'{0} :{1}'.format(target, msg)) |
java | @Override
public Resource getResource(String key)
{
Resource resource = new ClasspathResource(key, this.getChildPath(root, key), this);
return resource;
} |
python | def get_cases(variant_source, case_lines=None, case_type='ped',
variant_type='snv', variant_mode='vcf'):
"""Create a cases and populate it with individuals
Args:
variant_source (str): Path to vcf files
case_lines (Iterable): Ped like lines
... |
python | def getVarianceComps(self, univariance=False):
"""
Return the estimated variance components
Args:
univariance: Boolean indicator, if True variance components are normalized to sum up to 1 for each trait
Returns:
variance components of all random effects on all ... |
python | def supports_version_type(self, version_type=None):
"""Tests if the given version type is supported.
arg: version_type (osid.type.Type): a version Type
return: (boolean) - ``true`` if the type is supported, ``false``
otherwise
raise: IllegalState - syntax is not a ``... |
python | def get_word_input(data, word_dict, embed, embed_dim):
'''
Get word input.
'''
batch_size = len(data)
max_sequence_length = max(len(d) for d in data)
sequence_length = max_sequence_length
word_input = np.zeros((max_sequence_length, batch_size,
embed_dim), dtype=np.... |
python | def clear(self):
"""
removes all items from this manifest, and clears and removes all
sub-sections
"""
for sub in self.sub_sections.values():
sub.clear()
self.sub_sections.clear()
ManifestSection.clear(self) |
python | def assign_vertices(self):
"""
Sets .edges, .verts for node positions.
X and Y positions here refer to base assumption that tree is right
facing, reorient_coordinates() will handle re-translating this.
"""
# shortname
uselen = bool(self.ttree.style.use_e... |
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