assembly_accession
string
bioproject
string
biosample
string
wgs_master
string
refseq_category
string
taxid
int64
species_taxid
int64
organism_name
string
infraspecific_name
string
isolate
string
version_status
string
assembly_level
string
release_type
string
genome_rep
string
seq_rel_date
string
asm_name
string
asm_submitter
string
gbrs_paired_asm
string
paired_asm_comp
string
ftp_path
string
excluded_from_refseq
string
relation_to_type_material
string
asm_not_live_date
string
assembly_type
string
group
string
genome_size
int64
genome_size_ungapped
int64
gc_percent
float64
replicon_count
int64
scaffold_count
int64
contig_count
int64
annotation_provider
string
annotation_name
string
annotation_date
string
total_gene_count
int64
protein_coding_gene_count
int64
non_coding_gene_count
int64
pubmed_id
string
GCF_000069785.1
PRJNA224116
SAMEA3138280
na
reference genome
977,880
164,546
Cupriavidus taiwanensis LMG 19424
strain=LMG 19424
na
latest
Chromosome
Major
Full
2008-03-27
ASM6978v1
Genoscope
GCA_000069785.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/069/785/GCF_000069785.1_ASM6978v1/
na
assembly from type material
na
haploid
bacteria
6,476,522
6,476,359
67
3
3
5
NCBI RefSeq
GCF_000069785.1-RS_2025_12_09
2025-12-09
5,920
5,726
84
18490699
GCF_000069945.1
PRJNA224116
SAMEA3138282
na
na
504,474
43,771
Corynebacterium urealyticum DSM 7109
strain=DSM 7109
na
latest
Complete Genome
Major
Full
2008-04-02
ASM6994v1
Bielefeld Univ
GCA_000069945.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/069/945/GCF_000069945.1_ASM6994v1/
na
assembly from type material
na
haploid
bacteria
2,369,219
2,369,219
64
1
1
1
NCBI RefSeq
GCF_000069945.1-RS_2026_02_10
2026-02-10
2,078
1,974
63
18367281
GCF_000069965.1
PRJNA224116
SAMEA1705945
na
reference genome
529,507
584
Proteus mirabilis HI4320
strain=HI4320
na
latest
Complete Genome
Major
Full
2008-04-03
ASM6996v1
Sanger Institute
GCA_000069965.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/069/965/GCF_000069965.1_ASM6996v1/
na
na
na
haploid
bacteria
4,099,895
4,099,895
39
2
2
2
NCBI RefSeq
GCF_000069965.1-RS_2025_07_15
2025-07-15
3,803
3,632
109
18375554
GCF_000070465.1
PRJNA224116
SAMEA1705952
na
na
360,910
521
Bordetella avium 197N
strain=197N
na
latest
Complete Genome
Major
Full
2006-09-29
ASM7046v1
Sanger Institute
GCA_000070465.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/070/465/GCF_000070465.1_ASM7046v1/
na
na
na
haploid
bacteria
3,732,255
3,732,255
61.5
1
1
1
NCBI RefSeq
GCF_000070465.1-RS_2026_02_06
2026-02-06
3,454
3,337
75
16885469
GCF_000070605.1
PRJNA224116
SAMEA3138285
na
na
340
339
Xanthomonas campestris pv. campestris
strain=B100
na
latest
Complete Genome
Major
Full
2008-02-12
ASM7060v1
Bielefeld Univ
GCA_000070605.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/070/605/GCF_000070605.1_ASM7060v1/
na
na
na
haploid
bacteria
5,079,002
5,079,002
65
1
1
1
NCBI RefSeq
GCF_000070605.1-RS_2025_05_07
2025-05-07
4,463
4,175
149
18304669
GCF_000072485.1
PRJNA224116
SAMEA1705934
na
na
522,373
40,324
Stenotrophomonas maltophilia K279a
strain=K279a
na
latest
Complete Genome
Major
Full
2008-06-10
ASM7248v1
Wellcome Trust Sanger Institute
GCA_000072485.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/072/485/GCF_000072485.1_ASM7248v1/
na
na
na
haploid
bacteria
4,851,126
4,851,126
66.5
1
1
1
NCBI RefSeq
GCF_000072485.1-RS_2025_05_06
2025-05-06
4,513
4,381
90
18419807
GCF_000073005.1
PRJNA224116
SAMEA1705930
na
reference genome
570,417
263,437
Wolbachia endosymbiont of Culex quinquefasciatus Pel
strain=wPip
na
latest
Chromosome
Major
Full
2008-06-13
ASM7300v1
Wellcome Trust Sanger Institute
GCA_000073005.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/073/005/GCF_000073005.1_ASM7300v1/
na
na
na
haploid
bacteria
1,482,455
1,482,355
34
1
1
2
NCBI RefSeq
GCF_000073005.1-RS_2026_01_08
2026-01-08
1,396
1,247
41
18550617
GCF_000083545.1
PRJNA224116
SAMEA3138288
na
reference genome
661,410
408
Methylorubrum extorquens DM4
strain=DM4
na
latest
Complete Genome
Major
Full
2009-07-17
ASM8354v1
Genoscope
GCA_000083545.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/083/545/GCF_000083545.1_ASM8354v1/
na
assembly from heterotypic synonym type material
na
haploid
bacteria
6,123,851
6,123,851
68
3
3
3
NCBI RefSeq
GCF_000083545.1-RS_2025_05_16
2025-05-16
5,828
5,570
77
na
GCF_000083565.1
PRJNA224116
SAMEA3138289
na
na
662,598
487
Neisseria meningitidis alpha14
strain=alpha14
na
latest
Complete Genome
Major
Full
2009-07-23
ASM8356v1
Bielefeld University
GCA_000083565.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/083/565/GCF_000083565.1_ASM8356v1/
na
na
na
haploid
bacteria
2,145,295
2,145,295
52
1
1
1
NCBI RefSeq
GCF_000083565.1-RS_2026_02_16
2026-02-16
2,140
1,900
74
18305155
GCF_000085225.1
PRJNA224116
SAMEA3138290
na
na
645,462
1,496
Clostridioides difficile CD196
strain=CD196
na
latest
Complete Genome
Major
Full
2009-10-01
ASM8522v1
Wellcome Trust Sanger Institute
GCA_000085225.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/085/225/GCF_000085225.1_ASM8522v1/
na
na
na
haploid
bacteria
4,110,554
4,110,554
28.5
1
1
1
NCBI RefSeq
GCF_000085225.1-RS_2026_02_28
2026-02-28
3,755
3,587
117
19781061
GCF_000085865.1
PRJNA224116
SAMEA2272593
na
na
347,256
2,098
Metamycoplasma hominis ATCC 23114
strain=ATCC 23114
na
latest
Complete Genome
Major
Full
2009-11-16
ASM8586v1
Genoscope
GCA_000085865.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/085/865/GCF_000085865.1_ASM8586v1/
na
assembly from type material
na
haploid
bacteria
665,445
665,445
27
1
1
1
NCBI RefSeq
GCF_000085865.1-RS_2026_04_01
2026-04-01
601
550
42
19816563
GCF_000087965.2
PRJNA224116
SAMEA3138291
na
na
380,358
29,447
Xanthomonas albilineans GPE PC73
strain=GPE PC73
na
latest
Complete Genome
Major
Full
2010-05-05
ASM8796v1
Genoscope
GCA_000087965.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/087/965/GCF_000087965.2_ASM8796v1/
na
na
na
haploid
bacteria
3,852,299
3,852,299
63
4
4
4
NCBI RefSeq
GCF_000087965.2-RS_2025_05_06
2025-05-06
3,328
3,125
84
20017926
GCF_000089865.1
PRJNA224116
SAMEA2272074
na
na
2,110
2,110
Mycoplasmopsis agalactiae
strain=5632
na
latest
Complete Genome
Major
Full
2010-03-05
ASM8986v1
Genoscope
GCA_000089865.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/089/865/GCF_000089865.1_ASM8986v1/
na
na
na
haploid
bacteria
1,006,702
1,006,702
29.5
1
1
1
NCBI RefSeq
GCF_000089865.1-RS_2025_06_27
2025-06-27
872
817
43
na
GCF_000090405.2
PRJNA224116
SAMEA3138292
na
na
761,659
146,919
Salinibacter ruber M8
strain=M8
na
latest
Complete Genome
Major
Full
2010-05-11
ASM9040v2
Genoscope
GCA_000090405.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/090/405/GCF_000090405.2_ASM9040v2/
na
na
na
haploid
bacteria
3,832,918
3,832,918
66
5
5
5
NCBI RefSeq
GCF_000090405.1-RS_2025_09_28
2025-09-28
3,240
3,152
51
20164864
GCF_000090795.2
PRJNA66531
SAMN02743868
ACUQ00000000.1
reference genome
400,682
400,682
Amphimedon queenslandica
na
na
latest
Scaffold
Minor
Full
2010-05-28
v1.1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000090795.2
different
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/090/795/GCF_000090795.2_v1.1/
na
na
na
haploid
invertebrate
164,242,647
143,116,723
35.5
0
13,132
27,269
NCBI RefSeq
NCBI Amphimedon queenslandica Annotation Release 102
2021-06-07
25,955
20,215
5,446
17053047;20686567
GCF_000090875.1
PRJNA224116
SAMN02463843
ADEA00000000.1
na
641,149
641,148
Neisseria sp. oral taxon 014 str. F0314
strain=F0314
na
latest
Scaffold
Major
Full
2010-06-14
ASM9087v1
Broad Institute
GCA_000090875.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/090/875/GCF_000090875.1_ASM9087v1/
na
na
na
haploid
bacteria
2,515,760
2,502,635
53
1
11
48
NCBI RefSeq
GCF_000090875.1-RS_2024_06_11
2024-06-11
2,423
2,308
65
na
GCF_000090945.1
PRJNA224116
SAMN02463827
ADCS00000000.1
na
575,609
652,713
Peptoniphilus sp. oral taxon 386 str. F0131
strain=F0131
na
latest
Scaffold
Major
Full
2010-06-17
ASM9094v1
Broad Institute
GCA_000090945.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/090/945/GCF_000090945.1_ASM9094v1/
na
na
na
haploid
bacteria
1,569,385
1,550,062
31
1
11
72
NCBI RefSeq
GCF_000090945.1-RS_2024_08_12
2024-08-12
1,550
1,463
57
na
GCF_000090965.1
PRJNA224116
SAMN02604290
na
na
372,461
9
Buchnera aphidicola BCc
strain=BCc
na
latest
Complete Genome
Major
Full
2006-10-18
ASM9096v1
Valencia Univ.
GCA_000090965.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/090/965/GCF_000090965.1_ASM9096v1/
na
na
na
haploid
bacteria
422,434
422,434
20
2
2
2
NCBI RefSeq
GCF_000090965.1-RS_2025_03_11
2025-03-11
408
369
37
16413149;17038625
GCF_000090985.2
PRJNA39769
SAMN03081421
na
reference genome
296,587
296,587
Micromonas commoda
strain=RCC299
na
latest
Complete Genome
Major
Full
2009-04-10
ASM9098v2
Micromonas genome consortium
GCA_000090985.2
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/090/985/GCF_000090985.2_ASM9098v2/
na
assembly from type material
na
haploid
plant
20,989,326
20,989,326
64
17
17
17
Micromonas genome consortium
Annotation submitted by Micromonas genome consortium
2023-04-03
10,125
10,049
72
19359590
GCF_000091005.1
PRJNA224116
SAMD00060955
na
na
573,235
562
Escherichia coli O26:H11 str. 11368
strain=11368
na
latest
Complete Genome
Major
Full
2009-09-10
ASM9100v1
University of Tokyo, Graduate School of Frontier Sciences
GCA_000091005.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/005/GCF_000091005.1_ASM9100v1/
na
na
na
haploid
bacteria
5,855,531
5,855,531
50.5
5
5
5
NCBI RefSeq
GCF_000091005.1-RS_2025_06_23
2025-06-23
6,033
5,558
134
19815525
GCF_000091025.4
PRJNA10623
SAMN03081415
na
reference genome
284,811
33,169
Eremothecium gossypii ATCC 10895
strain=ATCC 10895
na
latest
Complete Genome
Major
Full
2010-10-18
ASM9102v4
Biozentrum, University of Basel, Switzerland
GCA_000091025.4
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/025/GCF_000091025.4_ASM9102v4/
na
na
na
haploid
fungi
9,095,748
9,095,748
52
7
7
7
Biozentrum, University of Basel, Switzerland
Annotation submitted by Biozentrum, University of Basel, Switzerland
2025-07-15
5,317
4,776
538
15001715
GCF_000091045.1
PRJNA10698
SAMN03081418
na
reference genome
214,684
40,410
Cryptococcus deneoformans JEC21
strain=JEC21
na
latest
Chromosome
Major
Full
2005-01-07
ASM9104v1
TIGR
GCA_000091045.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/045/GCF_000091045.1_ASM9104v1/
na
na
na
haploid
fungi
19,051,922
19,050,125
48.5
14
14
37
TIGR
Annotation submitted by TIGR
2018-04-11
7,004
6,632
134
15653466
GCF_000091085.2
PRJNA224116
SAMN02641564
na
na
115,711
83,558
Chlamydia pneumoniae AR39
strain=AR39
na
latest
Complete Genome
Major
Full
2001-01-09
ASM9108v2
TIGR
GCA_000091085.2
different
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/085/GCF_000091085.2_ASM9108v2/
na
na
na
haploid
bacteria
1,229,853
1,229,853
40.5
1
1
1
NCBI RefSeq
GCF_000091085.2-RS_2025_07_07
2025-07-07
1,093
1,037
44
10684935
GCF_000091125.1
PRJNA224116
SAMD00060927
na
reference genome
452,662
332,055
Sphingobium indicum UT26S
strain=UT26S
na
latest
Complete Genome
Major
Full
2010-03-31
ASM9112v1
National Institute of Technology and Evaluation (NITE)
GCA_000091125.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/125/GCF_000091125.1_ASM9112v1/
na
assembly from heterotypic synonym type material
na
haploid
bacteria
4,424,862
4,424,862
65
5
5
5
NCBI RefSeq
GCF_000091125.1-RS_2025_12_22
2025-12-22
4,257
4,136
67
20817768
GCF_000091205.1
PRJNA28057
na
na
reference genome
280,699
45,157
Cyanidioschyzon merolae strain 10D
strain=10D
na
latest
Complete Genome
Major
Full
2007-07-11
ASM9120v1
National Institute of Genetics, Japan
GCA_000091205.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/205/GCF_000091205.1_ASM9120v1/
na
na
na
haploid
protozoa
16,546,747
16,546,747
55
20
20
20
National Institute of Genetics, Japan
Annotation submitted by National Institute of Genetics, Japan
2017-06-16
5,373
4,803
570
15071595;17623057
GCF_000091225.2
PRJNA155
SAMEA3138295
na
reference genome
284,813
6,035
Encephalitozoon cuniculi GB-M1
na
GB-M1
latest
Chromosome
Major
Full
2017-03-09
ASM9122v2
Genoscope
GCA_000091225.2
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/225/GCF_000091225.2_ASM9122v2/
na
na
na
haploid
fungi
2,497,519
2,496,719
47.5
11
11
12
Genoscope
Annotation submitted by Genoscope
2022-12-22
2,155
2,122
33
11719806;20003517
GCF_000091305.1
PRJNA224116
SAMEA2272773
na
na
680,198
1,930
Streptomyces scabiei 87.22
strain=87.22
na
latest
Complete Genome
Major
Full
2009-10-06
ASM9130v1
Wellcome Trust Sanger Institute
GCA_000091305.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/305/GCF_000091305.1_ASM9130v1/
na
na
na
haploid
bacteria
10,148,695
10,148,695
71.5
1
1
1
NCBI RefSeq
GCF_000091305.1-RS_2025_12_12
2025-12-12
8,908
8,605
94
20064060
GCF_000091325.1
PRJNA224116
SAMD00060963
na
reference genome
637,905
60,217
Shewanella violacea DSS12
strain=DSS12
na
latest
Complete Genome
Major
Full
2010-04-01
ASM9132v1
Nara Institute of Science and Technology
GCA_000091325.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/325/GCF_000091325.1_ASM9132v1/
na
assembly from type material
na
haploid
bacteria
4,962,103
4,962,103
44.5
1
1
1
NCBI RefSeq
GCF_000091325.1-RS_2025_12_11
2025-12-11
4,168
3,918
174
na
GCF_000091345.1
PRJNA224116
SAMEA3138296
na
na
592,205
210
Helicobacter pylori B38
strain=B38
na
latest
Complete Genome
Major
Full
2009-07-15
ASM9134v1
Institut Pasteur
GCA_000091345.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/345/GCF_000091345.1_ASM9134v1/
na
na
na
haploid
bacteria
1,576,758
1,576,758
39
1
1
1
NCBI RefSeq
GCF_000091345.1-RS_2026_02_10
2026-02-10
1,537
1,413
46
20537153
GCF_000091405.1
PRJNA224116
SAMEA2272487
na
na
633,699
33,959
Lactobacillus johnsonii FI9785
strain=FI9785
na
latest
Complete Genome
Major
Full
2009-11-04
ASM9140v1
Institute of Food Research
GCA_000091405.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/405/GCF_000091405.1_ASM9140v1/
na
na
na
haploid
bacteria
1,785,116
1,785,116
34.5
3
3
3
NCBI RefSeq
GCF_000091405.1-RS_2026_04_17
2026-04-17
1,775
1,626
68
14962040;16122563;19767436
GCF_000091465.1
PRJNA224116
SAMEA2271989
na
na
693,153
693,153
Vibrio atlanticus
strain=LGP32
na
latest
Complete Genome
Major
Full
2009-02-13
ASM9146v1
Institut Pasteur
GCA_000091465.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/465/GCF_000091465.1_ASM9146v1/
na
na
na
haploid
bacteria
4,974,818
4,974,818
44
2
2
2
NCBI RefSeq
GCF_000091465.1-RS_2026_02_06
2026-02-06
4,412
4,190
143
na
GCF_000091545.1
PRJNA224116
SAMD00061070
na
reference genome
300,852
274
Thermus thermophilus HB8
strain=HB8
na
latest
Complete Genome
Major
Full
2004-11-15
ASM9154v1
National Institute of Advanced Industrial Science and Technology, Japan
GCA_000091545.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/545/GCF_000091545.1_ASM9154v1/
na
assembly from type material
na
haploid
bacteria
2,116,056
2,116,056
69.5
3
3
3
NCBI RefSeq
GCF_000091545.1-RS_2025_12_11
2025-12-11
2,285
2,168
57
na
GCF_000091565.1
PRJNA224116
SAMEA3138297
na
na
665,029
552
Erwinia amylovora CFBP1430
strain=CFPB1430
na
latest
Complete Genome
Major
Full
2010-03-25
ASM9156v1
Bielefeld Univ
GCA_000091565.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/565/GCF_000091565.1_ASM9156v1/
na
na
na
haploid
bacteria
3,833,832
3,833,832
53.5
2
2
2
NCBI RefSeq
GCF_000091565.1-RS_2025_12_20
2025-12-20
3,506
3,295
121
20192826
GCF_000091645.1
PRJNA224116
SAMD00060939
na
na
511,691
1,309
Streptococcus mutans NN2025
strain=NN2025
na
latest
Complete Genome
Major
Full
2009-07-31
ASM9164v1
The Institute of Medical Science, Tokyo University
GCA_000091645.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/645/GCF_000091645.1_ASM9164v1/
na
na
na
haploid
bacteria
2,013,587
2,013,587
37
1
1
1
NCBI RefSeq
GCF_000091645.1-RS_2026_02_10
2026-02-10
1,982
1,833
84
19656368
GCF_000091665.1
PRJNA224116
SAMN02603984
na
reference genome
243,232
2,190
Methanocaldococcus jannaschii DSM 2661
strain=DSM 2661
na
latest
Complete Genome
Major
Full
1999-12-22
ASM9166v1
TIGR
GCA_000091665.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/665/GCF_000091665.1_ASM9166v1/
na
assembly from type material
na
haploid
archaea
1,739,927
1,739,927
31.5
3
3
3
NCBI RefSeq
GCF_000091665.1-RS_2025_11_21
2025-11-21
1,907
1,811
45
8688087
GCF_000091725.1
PRJNA224116
SAMEA2272304
na
na
754,252
1,744
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1
strain=CIRM-B1AI
na
latest
Complete Genome
Major
Full
2010-05-26
ASM9172v1
I.N.R.A., French National Institute for Agricultural Research
GCA_000091725.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/725/GCF_000091725.1_ASM9172v1/
na
na
na
haploid
bacteria
2,616,384
2,616,384
67.5
1
1
1
NCBI RefSeq
GCF_000091725.1-RS_2025_04_04
2025-04-04
2,348
2,237
54
20668525
GCF_000091765.1
PRJNA224116
SAMEA2272191
na
na
748,671
47,770
Lactobacillus crispatus ST1
strain=ST1
na
latest
Chromosome
Major
Full
2010-04-22
ASM9176v1
Institute of Biotechnology, University of Helsinki, Finland
GCA_000091765.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/765/GCF_000091765.1_ASM9176v1/
na
na
na
haploid
bacteria
2,043,161
2,042,571
37
1
1
2
NCBI RefSeq
GCF_000091765.1-RS_2026_02_16
2026-02-16
2,050
1,884
79
20435723
GCF_000091785.1
PRJNA224116
SAMEA2272007
na
reference genome
661,367
450
Legionella longbeachae NSW150
strain=NSW150
na
latest
Complete Genome
Major
Full
2010-02-13
ASM9178v1
Institut Pasteur - Unite de Biologie des Bacteries Intracellulaires
GCA_000091785.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/785/GCF_000091785.1_ASM9178v1/
na
na
na
haploid
bacteria
4,149,158
4,149,158
37
2
2
2
NCBI RefSeq
GCF_000091785.1-RS_2026_02_02
2026-02-02
3,628
3,497
62
20174605
GCF_000091905.1
PRJNA224116
SAMEA3138299
na
na
218,494
1,307
Streptococcus suis P1/7
strain=P1/7
na
latest
Complete Genome
Major
Full
2009-07-07
ASM9190v1
Sanger Institute
GCA_000091905.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/905/GCF_000091905.1_ASM9190v1/
na
na
na
haploid
bacteria
2,007,491
2,007,491
41.5
1
1
1
NCBI RefSeq
GCF_000091905.1-RS_2025_04_18
2025-04-18
1,956
1,835
72
19603075
GCF_000091985.1
PRJNA224116
SAMEA2272735
na
na
679,897
217
Helicobacter mustelae 12198
strain=12198
na
latest
Complete Genome
Major
Full
2010-03-11
ASM9198v1
Wellcome Trust Sanger Institute
GCA_000091985.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/091/985/GCF_000091985.1_ASM9198v1/
na
na
na
haploid
bacteria
1,578,097
1,578,097
42.5
1
1
1
NCBI RefSeq
GCF_000091985.1-RS_2025_04_30
2025-04-30
1,458
1,389
48
20219135
GCF_000092025.1
PRJNA224116
SAMN02603108
na
reference genome
176,299
1,176,649
Agrobacterium fabrum str. C58
strain=C58
na
latest
Complete Genome
Major
Full
2007-11-05
ASM9202v1
Cereon
GCA_000092025.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/025/GCF_000092025.1_ASM9202v1/
na
assembly from type material
na
haploid
bacteria
5,674,258
5,674,258
59
4
4
4
NCBI RefSeq
GCF_000092025.1-RS_2025_04_23
2025-04-23
5,338
5,178
71
11743193;11743194
GCF_000092045.1
PRJNA224116
SAMN02603106
na
reference genome
347,834
29,449
Rhizobium etli CFN 42
strain=CFN 42
na
latest
Complete Genome
Major
Full
2006-03-06
ASM9204v1
Centro de Ciencias Genomicas, Universidad Nacional Autonoma de Mexico
GCA_000092045.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/045/GCF_000092045.1_ASM9204v1/
na
assembly from type material
na
haploid
bacteria
6,530,228
6,530,228
61
7
7
7
NCBI RefSeq
GCF_000092045.1-RS_2025_11_29
2025-11-29
6,363
5,992
63
2013564;9274036;12421308;16505379
GCF_000092065.1
PRJNA19407
SAMN03081420
na
na
436,017
242,159
Ostreococcus lucimarinus CCE9901
strain=CCE9901
na
latest
Complete Genome
Major
Full
2007-04-10
ASM9206v1
US DOE Joint Genome Institute
GCA_000092065.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/065/GCF_000092065.1_ASM9206v1/
na
na
na
haploid
plant
13,204,888
13,204,888
60.5
21
21
21
US DOE Joint Genome Institute
Annotation submitted by US DOE Joint Genome Institute
2017-07-19
7,640
7,603
0
17460045
GCF_000092105.1
PRJNA224116
SAMN02598463
na
reference genome
521,674
120
Planctopirus limnophila DSM 3776
strain=DSM 3776
na
latest
Complete Genome
Major
Full
2010-05-13
ASM9210v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092105.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/105/GCF_000092105.1_ASM9210v1/
na
assembly from type material
na
haploid
bacteria
5,460,085
5,460,085
53.5
2
2
2
NCBI RefSeq
GCF_000092105.1-RS_2025_11_20
2025-11-20
4,130
4,043
74
21304691
GCF_000092125.1
PRJNA224116
SAMN02598469
na
reference genome
526,227
52,022
Allomeiothermus silvanus DSM 9946
strain=DSM 9946
na
latest
Complete Genome
Major
Full
2010-05-26
ASM9212v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092125.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/125/GCF_000092125.1_ASM9212v1/
na
assembly from type material
na
haploid
bacteria
3,721,669
3,721,669
62.5
3
3
3
NCBI RefSeq
GCF_000092125.1-RS_2026_03_12
2026-03-12
3,752
3,564
56
21304690
GCF_000092165.1
PRJNA224116
SAMN02603314
na
na
714,359
1,428
Bacillus thuringiensis BMB171
strain=BMB171
na
latest
Complete Genome
Major
Full
2010-05-20
ASM9216v1
Huazhong Agricultural University
GCA_000092165.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/165/GCF_000092165.1_ASM9216v1/
na
na
na
haploid
bacteria
5,643,051
5,643,051
35
2
2
2
NCBI RefSeq
GCF_000092165.1-RS_2025_05_11
2025-05-11
5,769
5,419
149
20525827
GCF_000092185.1
PRJNA224116
SAMN02598509
na
reference genome
633,148
54,254
Thermosphaera aggregans DSM 11486
strain=DSM 11486
na
latest
Complete Genome
Major
Full
2010-05-17
ASM9218v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092185.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/185/GCF_000092185.1_ASM9218v1/
na
assembly from type material
na
haploid
archaea
1,316,595
1,316,595
46.5
1
1
1
NCBI RefSeq
GCF_000092185.1-RS_2025_05_01
2025-05-01
1,462
1,399
50
21304709
GCF_000092205.1
PRJNA224116
SAMN02598502
na
reference genome
589,865
427,923
Desulfurivibrio alkaliphilus AHT 2
strain=AHT 2
na
latest
Complete Genome
Major
Full
2010-05-27
ASM9220v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092205.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/205/GCF_000092205.1_ASM9220v1/
na
assembly from type material
na
haploid
bacteria
3,097,763
3,097,763
60.5
1
1
1
NCBI RefSeq
GCF_000092205.1-RS_2025_07_03
2025-07-03
2,737
2,646
57
na
GCF_000092225.1
PRJNA224116
SAMN00002597
na
reference genome
521,096
2,061
Tsukamurella paurometabola DSM 20162
strain=DSM 20162
na
latest
Complete Genome
Major
Full
2010-05-13
ASM9222v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092225.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/225/GCF_000092225.1_ASM9222v1/
na
assembly from type material
na
haploid
bacteria
4,479,724
4,479,724
68.5
2
2
2
NCBI RefSeq
GCF_000092225.1-RS_2025_05_01
2025-05-01
4,368
4,242
57
21886861
GCF_000092245.1
PRJNA224116
SAMN02598489
na
reference genome
572,480
28,199
Arcobacter nitrofigilis DSM 7299
strain=DSM 7299
na
latest
Complete Genome
Major
Full
2010-05-17
ASM9224v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092245.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/245/GCF_000092245.1_ASM9224v1/
na
assembly from type material
na
haploid
bacteria
3,192,235
3,192,235
28.5
1
1
1
NCBI RefSeq
GCF_000092245.1-RS_2025_12_10
2025-12-10
3,200
3,119
69
21304714
GCF_000092265.1
PRJNA224116
SAMN02603777
na
na
1,236,608
480
Moraxella catarrhalis BBH18
strain=BBH18
na
latest
Complete Genome
Major
Full
2010-05-11
ASM9226v1
Radboud University Nijmegen Medical Centre
GCA_000092265.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/265/GCF_000092265.1_ASM9226v1/
na
na
na
haploid
bacteria
1,863,286
1,863,286
41.5
1
1
1
NCBI RefSeq
GCF_000092265.1-RS_2025_12_03
2025-12-03
1,738
1,640
66
20453089
GCF_000092285.1
PRJNA224116
SAMN02598513
na
na
509,190
88,688
Caulobacter segnis ATCC 21756
strain=ATCC 21756
na
latest
Complete Genome
Major
Full
2010-04-30
ASM9228v1
US DOE Joint Genome Institute
GCA_000092285.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/285/GCF_000092285.1_ASM9228v1/
na
assembly from type material
na
haploid
bacteria
4,655,622
4,655,622
67.5
1
1
1
NCBI RefSeq
GCF_000092285.1-RS_2025_12_23
2025-12-23
4,439
4,179
61
na
GCF_000092305.1
PRJNA224116
SAMN00017484
na
reference genome
573,063
67,760
Methanocaldococcus infernus ME
strain=ME
na
latest
Complete Genome
Major
Full
2010-04-30
ASM9230v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092305.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/305/GCF_000092305.1_ASM9230v1/
na
assembly from type material
na
haploid
archaea
1,328,194
1,328,194
33.5
1
1
1
NCBI RefSeq
GCF_000092305.1-RS_2025_11_20
2025-11-20
1,510
1,450
46
na
GCF_000092325.1
PRJNA224116
SAMN02603181
na
na
759,350
216,816
Bifidobacterium longum subsp. longum JDM301
strain=JDM301
na
latest
Complete Genome
Major
Full
2010-05-18
ASM9232v1
Department of Medical Microbiology and Parasitology,Shanghai Jiao Tong University School of Medicine
GCA_000092325.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/325/GCF_000092325.1_ASM9232v1/
na
na
na
haploid
bacteria
2,477,838
2,477,838
60
1
1
1
NCBI RefSeq
GCF_000092325.1-RS_2026_03_27
2026-03-27
2,105
1,955
67
20525832
GCF_000092365.1
PRJNA224116
SAMN02598519
na
na
644,284
28,264
Arcanobacterium haemolyticum DSM 20595
strain=DSM 20595
na
latest
Complete Genome
Major
Full
2010-05-27
ASM9236v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092365.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/365/GCF_000092365.1_ASM9236v1/
na
assembly from type material
na
haploid
bacteria
1,986,154
1,986,154
53
1
1
1
NCBI RefSeq
GCF_000092365.1-RS_2025_11_24
2025-11-24
1,865
1,775
65
21304742
GCF_000092385.1
PRJNA224116
SAMN02603683
na
na
749,414
379,067
Streptomyces bingchenggensis BCW-1
strain=BCW-1
na
latest
Complete Genome
Major
Full
2010-05-28
ASM9238v1
Northeast Agricultural University
GCA_000092385.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/385/GCF_000092385.1_ASM9238v1/
na
na
na
haploid
bacteria
11,936,683
11,936,683
71
1
1
1
NCBI RefSeq
GCF_000092385.1-RS_2025_04_26
2025-04-26
10,188
9,702
89
20581206
GCF_000092405.1
PRJNA224116
SAMN02598518
na
reference genome
643,648
86,170
Syntrophothermus lipocalidus DSM 12680
strain=DSM 12680
na
latest
Complete Genome
Major
Full
2010-05-28
ASM9240v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092405.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/405/GCF_000092405.1_ASM9240v1/
na
assembly from type material
na
haploid
bacteria
2,405,559
2,405,559
51
1
1
1
NCBI RefSeq
GCF_000092405.1-RS_2026_04_14
2026-04-14
2,417
2,343
56
21304731
GCF_000092425.1
PRJNA224116
SAMN02598522
na
reference genome
649,638
332,249
Truepera radiovictrix DSM 17093
strain=DSM 17093
na
latest
Complete Genome
Major
Full
2010-05-28
ASM9242v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092425.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/425/GCF_000092425.1_ASM9242v1/
na
assembly from type material
na
haploid
bacteria
3,260,398
3,260,398
68
1
1
1
NCBI RefSeq
GCF_000092425.1-RS_2025_05_01
2025-05-01
3,054
2,974
54
21475591
GCF_000092445.1
PRJNA224116
SAMN02598534
na
na
691,437
691,437
Geobacillus sp. C56-T3
strain=C56-T3
na
latest
Complete Genome
Major
Full
2010-06-01
ASM9244v1
US DOE Joint Genome Institute
GCA_000092445.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/445/GCF_000092445.1_ASM9244v1/
na
na
na
haploid
bacteria
3,650,813
3,650,813
52.5
1
1
1
NCBI RefSeq
GCF_000092445.1-RS_2024_08_13
2024-08-13
3,699
3,427
118
na
GCF_000092465.1
PRJNA224116
SAMN00002730
na
reference genome
591,019
84,599
Staphylothermus hellenicus DSM 12710
strain=DSM 12710
na
latest
Complete Genome
Major
Full
2010-06-01
ASM9246v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092465.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/465/GCF_000092465.1_ASM9246v1/
na
assembly from type material
na
haploid
archaea
1,580,347
1,580,347
37
1
1
1
NCBI RefSeq
GCF_000092465.1-RS_2025_05_01
2025-05-01
1,693
1,633
50
22180806
GCF_000092485.1
PRJNA224116
SAMN00744935
na
na
759,363
813
Chlamydia trachomatis D-EC
strain=D-EC
na
latest
Complete Genome
Major
Full
2010-06-09
ASM9248v1
Integrated Genomics, Inc.
GCA_000092485.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/485/GCF_000092485.1_ASM9248v1/
na
na
na
haploid
bacteria
1,050,015
1,050,015
41.5
2
2
2
NCBI RefSeq
GCF_000092485.1-RS_2025_04_26
2025-04-26
958
910
46
20547745
GCF_000092505.1
PRJNA224116
SAMN02603394
na
reference genome
762,051
136,609
Leuconostoc kimchii IMSNU 11154
strain=IMSNU 11154
na
latest
Complete Genome
Major
Full
2010-05-06
ASM9250v1
Institute of Microbiology
GCA_000092505.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/505/GCF_000092505.1_ASM9250v1/
na
assembly from type material
na
haploid
bacteria
2,101,787
2,101,787
38
6
6
6
NCBI RefSeq
GCF_000092505.1-RS_2026_04_14
2026-04-14
2,151
2,046
83
20494991
GCF_000092525.1
PRJNA224116
SAMN02603602
na
na
300,269
624
Shigella sonnei Ss046
strain=Ss046
na
latest
Complete Genome
Major
Full
2007-04-05
ASM9252v1
Microbial Genome Center of ChMPH
GCA_000092525.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/525/GCF_000092525.1_ASM9252v1/
na
na
na
haploid
bacteria
5,055,316
5,055,316
51
5
5
5
NCBI RefSeq
GCF_000092525.1-RS_2025_04_17
2025-04-17
5,172
4,319
130
16122562;16275786
GCF_000092545.1
PRJNA224116
SAMN02603241
na
na
400,673
446
Legionella pneumophila str. Corby
strain=Corby
na
latest
Complete Genome
Major
Full
2009-03-30
ASM9254v1
Fritz Lipmann Institute (former Institute of Molecular Biotechnology, IMB)
GCA_000092545.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/545/GCF_000092545.1_ASM9254v1/
na
na
na
haploid
bacteria
3,576,470
3,576,470
38.5
1
1
1
NCBI RefSeq
GCF_000092545.1-RS_2026_01_02
2026-01-02
3,226
3,111
57
17888731
GCF_000092565.1
PRJNA224116
SAMN02603127
na
na
189,518
173
Leptospira interrogans serovar Lai str. 56601
strain=56601
na
latest
Complete Genome
Major
Full
2010-04-06
ASM9256v1
Chinese National HGC, Shanghai
GCA_000092565.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/565/GCF_000092565.1_ASM9256v1/
na
na
na
haploid
bacteria
4,698,134
4,698,134
35
2
2
2
NCBI RefSeq
GCF_000092565.1-RS_2025_12_19
2025-12-19
3,884
3,643
44
12712204
GCF_000092585.1
PRJNA224116
SAMN02604081
na
na
710,127
2,096
Mycoplasmoides gallisepticum str. R(low)
strain=R
na
latest
Complete Genome
Major
Full
2010-01-28
ASM9258v1
Univ. Connecticut
GCA_000092585.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/585/GCF_000092585.1_ASM9258v1/
na
na
na
haploid
bacteria
1,012,800
1,012,800
31.5
1
1
1
NCBI RefSeq
GCF_000092585.1-RS_2026_02_26
2026-02-26
816
741
41
12949158
GCF_000092625.1
PRJNA224116
SAMN02604292
na
na
423,212
446
Legionella pneumophila 2300/99 Alcoy
strain=2300/99 Alcoy
na
latest
Complete Genome
Major
Full
2010-05-03
ASM9262v1
Valencia University and Public Health Research Superior Center (CSISP) of Valencia's Goverment, Spain
GCA_000092625.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/625/GCF_000092625.1_ASM9262v1/
na
na
na
haploid
bacteria
3,516,334
3,516,334
38.5
1
1
1
NCBI RefSeq
GCF_000092625.1-RS_2025_12_28
2025-12-28
3,156
3,054
57
20236513
GCF_000092645.1
PRJNA224116
SAMN00002587
na
reference genome
469,371
2,006
Thermobispora bispora DSM 43833
strain=DSM 43833
na
latest
Complete Genome
Major
Full
2010-05-17
ASM9264v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092645.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/645/GCF_000092645.1_ASM9264v1/
na
assembly from type material
na
haploid
bacteria
4,189,976
4,189,976
72.5
1
1
1
NCBI RefSeq
GCF_000092645.1-RS_2025_04_21
2025-04-21
3,635
3,541
66
21304716
GCF_000092665.1
PRJNA224116
SAMN02603692
na
na
707,184
813
Chlamydia trachomatis E/150
strain=E/150
na
latest
Complete Genome
Major
Full
2010-05-21
ASM9266v1
Oregon State University
GCA_000092665.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/665/GCF_000092665.1_ASM9266v1/
na
na
na
haploid
bacteria
1,042,996
1,042,996
41.5
1
1
1
NCBI RefSeq
GCF_000092665.1-RS_2025_04_26
2025-04-26
951
891
46
20308297
GCF_000092685.1
PRJNA224116
SAMN02603693
na
na
707,185
813
Chlamydia trachomatis G/9768
strain=G/9768
na
latest
Complete Genome
Major
Full
2010-05-21
ASM9268v1
Oregon State University
GCA_000092685.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/685/GCF_000092685.1_ASM9268v1/
na
na
na
haploid
bacteria
1,042,810
1,042,810
41.5
1
1
1
NCBI RefSeq
GCF_000092685.1-RS_2025_04_26
2025-04-26
950
896
46
20308297
GCF_000092705.1
PRJNA224116
SAMN02603694
na
na
707,186
813
Chlamydia trachomatis G/11222
strain=G/11222
na
latest
Complete Genome
Major
Full
2010-05-21
ASM9270v1
Oregon State University
GCA_000092705.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/705/GCF_000092705.1_ASM9270v1/
na
na
na
haploid
bacteria
1,042,354
1,042,354
41.5
1
1
1
NCBI RefSeq
GCF_000092705.1-RS_2025_04_26
2025-04-26
951
899
46
20308297
GCF_000092725.1
PRJNA224116
SAMN02603695
na
na
707,187
813
Chlamydia trachomatis G/11074
strain=G/11074
na
latest
Complete Genome
Major
Full
2010-05-21
ASM9272v1
Oregon State University
GCA_000092725.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/725/GCF_000092725.1_ASM9272v1/
na
na
na
haploid
bacteria
1,042,875
1,042,875
41.5
1
1
1
NCBI RefSeq
GCF_000092725.1-RS_2025_04_26
2025-04-26
952
898
46
20308297
GCF_000092745.1
PRJNA224116
SAMN02603691
na
na
707,183
813
Chlamydia trachomatis E/11023
strain=E/11023
na
latest
Complete Genome
Major
Full
2010-05-21
ASM9274v1
Oregon State University
GCA_000092745.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/745/GCF_000092745.1_ASM9274v1/
na
na
na
haploid
bacteria
1,043,025
1,043,025
41.5
1
1
1
NCBI RefSeq
GCF_000092745.1-RS_2025_02_21
2025-02-21
951
894
46
20308297
GCF_000092765.1
PRJNA224116
SAMN02603934
na
na
573,236
28,025
Bifidobacterium animalis subsp. lactis V9
strain=V9
na
latest
Complete Genome
Major
Full
2010-05-05
ASM9276v1
The Key Laboratory of Dairy Biotechnology and Bioengineering, Education Ministry of P. R. China, Department of Food Science and Engineering, Inner Mongolia Agricultural University, China
GCA_000092765.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/765/GCF_000092765.1_ASM9276v1/
na
na
na
haploid
bacteria
1,944,050
1,944,050
60.5
1
1
1
NCBI RefSeq
GCF_000092765.1-RS_2026_03_27
2026-03-27
1,626
1,543
67
20511504
GCF_000092785.1
PRJNA224116
SAMN02603402
na
reference genome
716,544
71,667
Waddlia chondrophila WSU 86-1044
strain=WSU 86-1044
na
latest
Complete Genome
Major
Full
2010-06-03
ASM9278v1
Institute of Microbiology, University Hospital Center and University of Lausanne, Switzerland
GCA_000092785.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/785/GCF_000092785.1_ASM9278v1/
na
assembly from type material
na
haploid
bacteria
2,131,905
2,131,905
43.5
2
2
2
NCBI RefSeq
GCF_000092785.1-RS_2026_03_30
2026-03-30
1,948
1,877
46
20531937
GCF_000092805.1
PRJNA224116
SAMN02603696
na
na
718,219
813
Chlamydia trachomatis G/9301
strain=G/9301
na
latest
Complete Genome
Major
Full
2010-05-28
ASM9280v1
Oregon State University
GCA_000092805.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/805/GCF_000092805.1_ASM9280v1/
na
na
na
haploid
bacteria
1,042,811
1,042,811
41.5
1
1
1
NCBI RefSeq
GCF_000092805.1-RS_2025_02_26
2025-02-26
950
895
46
na
GCF_000092825.1
PRJNA224116
SAMN02598516
na
reference genome
640,132
286,802
Segniliparus rotundus DSM 44985
strain=DSM 44985
na
latest
Complete Genome
Major
Full
2010-05-18
ASM9282v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092825.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/825/GCF_000092825.1_ASM9282v1/
na
assembly from type material
na
haploid
bacteria
3,157,527
3,157,527
67
1
1
1
NCBI RefSeq
GCF_000092825.1-RS_2025_05_01
2025-05-01
3,119
3,028
52
21304703
GCF_000092845.1
PRJNA224116
SAMN00001910
na
reference genome
526,224
84,378
Brachyspira murdochii DSM 12563
strain=DSM 12563
na
latest
Complete Genome
Major
Full
2010-05-13
ASM9284v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092845.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/845/GCF_000092845.1_ASM9284v1/
na
assembly from type material
na
haploid
bacteria
3,241,804
3,241,804
28
1
1
1
NCBI RefSeq
GCF_000092845.1-RS_2025_12_09
2025-12-09
2,900
2,829
41
21304710
GCF_000092865.1
PRJNA224116
SAMN02598424
na
reference genome
446,466
1,711
Cellulomonas flavigena DSM 20109
strain=DSM 20109
na
latest
Complete Genome
Major
Full
2010-05-13
ASM9286v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092865.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/865/GCF_000092865.1_ASM9286v1/
na
assembly from type material
na
haploid
bacteria
4,123,179
4,123,179
74.5
1
1
1
NCBI RefSeq
GCF_000092865.1-RS_2025_05_01
2025-05-01
3,770
3,684
54
21304688
GCF_000092885.1
PRJNA224116
SAMN02598517
na
reference genome
2,654,982
2,654,982
Paraburkholderia atlantica
strain=CCGE1002
na
latest
Complete Genome
Major
Full
2010-04-30
ASM9288v1
US DOE Joint Genome Institute
GCA_000092885.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/885/GCF_000092885.1_ASM9288v1/
na
na
na
haploid
bacteria
7,884,858
7,884,858
63.5
4
4
4
NCBI RefSeq
GCF_000092885.1-RS_2026_03_27
2026-03-27
7,296
6,914
99
23209196
GCF_000092905.1
PRJNA224116
SAMN00017498
na
reference genome
562,970
33,943
Kyrpidia tusciae DSM 2912
strain=DSM 2912
na
latest
Complete Genome
Major
Full
2010-04-29
ASM9290v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092905.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/905/GCF_000092905.1_ASM9290v1/
na
assembly from type material
na
haploid
bacteria
3,384,766
3,384,766
59
1
1
1
NCBI RefSeq
GCF_000092905.1-RS_2025_12_10
2025-12-10
3,365
3,229
78
22180816
GCF_000092925.1
PRJNA224116
SAMN02598514
na
reference genome
639,283
921
Ancylobacter novellus DSM 506
strain=DSM 506
na
latest
Complete Genome
Major
Full
2010-05-27
ASM9292v1
US DOE Joint Genome Institute
GCA_000092925.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/925/GCF_000092925.1_ASM9292v1/
na
assembly from type material
na
haploid
bacteria
4,765,023
4,765,023
68
1
1
1
NCBI RefSeq
GCF_000092925.1-RS_2026_03_03
2026-03-03
4,576
4,479
54
23450099
GCF_000092945.1
PRJNA224116
SAMN02598533
na
reference genome
635,013
278,994
Thermincola carboxydiphila JR
strain=JR
na
latest
Complete Genome
Major
Full
2010-05-13
ASM9294v1
US DOE Joint Genome Institute
GCA_000092945.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/945/GCF_000092945.1_ASM9294v1/
na
assembly from heterotypic synonym type material
na
haploid
bacteria
3,157,416
3,157,416
46
1
1
1
NCBI RefSeq
GCF_000092945.1-RS_2025_06_12
2025-06-12
3,121
3,034
65
na
GCF_000092965.1
PRJNA224116
SAMN02598500
na
reference genome
583,358
583,357
Thermoanaerobacter mathranii subsp. mathranii str. A3
strain=A3
na
latest
Complete Genome
Major
Full
2010-05-26
ASM9296v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092965.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/965/GCF_000092965.1_ASM9296v1/
na
assembly from type material
na
haploid
bacteria
2,306,092
2,306,092
34.5
1
1
1
NCBI RefSeq
GCF_000092965.1-RS_2025_12_13
2025-12-13
2,338
2,204
75
na
GCF_000092985.1
PRJNA224116
SAMN02598425
na
na
446,468
2,014
Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111
strain=DSM 43111
na
latest
Complete Genome
Major
Full
2010-05-26
ASM9298v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000092985.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/092/985/GCF_000092985.1_ASM9298v1/
na
assembly from type material
na
haploid
bacteria
6,543,312
6,543,312
72.5
2
2
2
NCBI RefSeq
GCF_000092985.1-RS_2025_12_03
2025-12-03
5,605
5,481
75
21304737
GCF_000093005.1
PRJNA224116
SAMN00014120
na
na
759,364
813
Chlamydia trachomatis D-LC
strain=D-LC
na
latest
Complete Genome
Major
Full
2010-06-09
ASM9300v1
Integrated Genomics, Inc.
GCA_000093005.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/093/005/GCF_000093005.1_ASM9300v1/
na
na
na
haploid
bacteria
1,050,013
1,050,013
41.5
2
2
2
NCBI RefSeq
GCF_000093005.1-RS_2025_04_15
2025-04-15
957
909
46
20547745
GCF_000093025.1
PRJNA224116
SAMN02598526
na
reference genome
666,681
1,055,487
Methylotenera versatilis 301
strain=301
na
latest
Complete Genome
Major
Full
2010-06-01
ASM9302v1
US DOE Joint Genome Institute
GCA_000093025.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/093/025/GCF_000093025.1_ASM9302v1/
na
assembly from type material
na
haploid
bacteria
3,059,871
3,059,871
42.5
1
1
1
NCBI RefSeq
GCF_000093025.1-RS_2026_03_27
2026-03-27
2,845
2,773
59
21622745
GCF_000093065.1
PRJNA224116
SAMN02603451
na
reference genome
515,618
401,619
Candidatus Riesia pediculicola USDA
strain=USDA
na
latest
Complete Genome
Major
Full
2010-03-16
ASM9306v1
J. Craig Venter Institute
GCA_000093065.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/093/065/GCF_000093065.1_ASM9306v1/
na
na
na
haploid
bacteria
582,127
582,127
28.5
2
2
2
NCBI RefSeq
GCF_000093065.1-RS_2026_03_31
2026-03-31
522
474
41
na
GCF_000093085.1
PRJNA224116
SAMN00000036
na
reference genome
439,292
85,683
[Bacillus] selenitireducens MLS10
strain=MLS10
na
latest
Complete Genome
Major
Full
2010-05-28
ASM9308v1
US DOE Joint Genome Institute (JGI-PGF)
GCA_000093085.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/093/085/GCF_000093085.1_ASM9308v1/
na
assembly from type material
na
haploid
bacteria
3,592,487
3,592,487
48.5
1
1
1
NCBI RefSeq
GCF_000093085.1-RS_2025_12_13
2025-12-13
3,410
3,265
95
na
GCF_000093125.2
PRJNA224116
SAMN02603776
na
na
653,938
1,639
Listeria monocytogenes 08-5578
strain=Aug-78
na
latest
Complete Genome
Major
Full
2014-06-12
ASM9312v2
Public Health Agency of Canada
GCA_000093125.2
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/093/125/GCF_000093125.2_ASM9312v2/
na
na
na
haploid
bacteria
3,109,678
3,109,678
38
2
2
2
NCBI RefSeq
GCF_000093125.2-RS_2025_02_07
2025-02-07
3,168
3,056
77
20167121
GCF_000093145.3
PRJNA224116
SAMN02603356
na
na
363,952
363,952
Comamonas thiooxydans
strain=CNB-1 substr. CNB-2
na
latest
Complete Genome
Major
Full
2014-03-03
ASM9314v2
Environmental Microbiology Research Center,Institute of Microbiology,Chinese Academy of Sciences
GCA_000093145.2
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/093/145/GCF_000093145.3_ASM9314v2/
na
na
na
haploid
bacteria
5,373,644
5,373,644
61.5
1
1
1
NCBI RefSeq
GCF_000093145.3-RS_2026_03_28
2026-03-28
4,972
4,777
92
19734336
GCF_000093165.1
PRJNA224116
SAMN02604139
na
na
600,809
367,488
Blattabacterium sp. (Periplaneta americana) str. BPLAN
strain=BPLAN
na
latest
Complete Genome
Major
Full
2010-04-01
ASM9316v1
University of Arizona-Tucson
GCA_000093165.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/093/165/GCF_000093165.1_ASM9316v1/
na
na
na
haploid
bacteria
640,442
640,442
28
2
2
2
NCBI RefSeq
GCF_000093165.1-RS_2024_08_13
2024-08-13
631
588
38
19880743
GCF_000093185.1
PRJNA224116
SAMN00003101
na
na
637,913
210
Helicobacter pylori v225d
strain=v225d
na
latest
Complete Genome
Major
Full
2010-06-03
ASM9318v1
The Pathosystems Resource Integration Center (PATRIC)
GCA_000093185.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/093/185/GCF_000093185.1_ASM9318v1/
na
na
na
haploid
bacteria
1,595,604
1,595,604
39
2
2
2
NCBI RefSeq
GCF_000093185.1-RS_2026_03_27
2026-03-27
1,549
1,418
45
20400544
GCF_000141845.1
PRJNA12726
na
na
na
412,030
5,888
Paramecium tetraurelia strain d4-2
strain=Stock d4-2
na
latest
Chromosome
Major
Partial
2004-07-08
ASM14184v1
Centre de Genetique Moleculaire, CNRS
na
na
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/141/845/GCF_000141845.1_ASM14184v1/
partial
na
na
haploid
protozoa
984,602
984,602
27.5
1
1
1
NCBI RefSeq
Annotation submitted by NCBI RefSeq
2023-04-03
465
463
1
15296759
GCF_000142805.1
PRJNA39575
SAMEA3138300
na
reference genome
559,295
381,046
Lachancea thermotolerans CBS 6340
strain=CBS 6340
na
latest
Chromosome
Major
Full
2009-06-05
ASM14280v1
Génolevures Consortium
GCA_000142805.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/142/805/GCF_000142805.1_ASM14280v1/
na
assembly from type material
na
haploid
fungi
10,392,862
10,390,139
47.5
8
8
10
Génolevures Consortium
Annotation submitted by Génolevures Consortium
2025-07-15
5,384
5,092
292
19525356
GCF_000142905.1
PRJNA274920
SAMN02953775
ADVD00000000.1
reference genome
461,836
529,818
Thecamonas trahens ATCC 50062
strain=ATCC 50062
na
latest
Scaffold
Major
Full
2010-06-17
TheTra_May2010
Broad Institute
GCA_000142905.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/142/905/GCF_000142905.1_TheTra_May2010/
na
na
na
haploid
protozoa
28,680,627
27,862,935
64
0
131
1,650
Broad Institute
Annotation submitted by Broad Institute
2024-02-16
10,629
10,515
114
na
GCF_000142945.1
PRJNA49677
SAMN02953670
AATU00000000.1
reference genome
403,677
4,787
Phytophthora infestans T30-4
strain=T30-4
na
latest
Scaffold
Major
Full
2009-06-17
ASM14294v1
Broad Institute
GCA_000142945.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/142/945/GCF_000142945.1_ASM14294v1/
na
assembly from type material
na
haploid
protozoa
228,543,505
190,133,476
51
0
4,921
18,288
Broad Institute
Annotation submitted by Broad Institute
2024-01-26
19,337
17,797
923
na
GCF_000142965.1
PRJNA224116
SAMN02463839
ADDV00000000.1
na
563,008
28,135
Segatella oris C735
strain=C735
na
latest
Scaffold
Major
Full
2010-06-18
ASM14296v1
Broad Institute
GCA_000142965.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/142/965/GCF_000142965.1_ASM14296v1/
na
na
na
haploid
bacteria
3,346,228
3,321,878
44
1
57
127
NCBI RefSeq
GCF_000142965.1-RS_2025_12_03
2025-12-03
2,883
2,664
62
na
GCF_000143085.1
PRJNA224116
SAMN02598531
na
reference genome
105,559
473,531
Nitrosococcus watsonii C-113
strain=C-113
na
latest
Complete Genome
Major
Full
2010-06-25
ASM14308v1
US DOE Joint Genome Institute
GCA_000143085.1
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/085/GCF_000143085.1_ASM14308v1/
na
assembly from type material
na
haploid
bacteria
3,373,286
3,373,286
50
3
3
3
NCBI RefSeq
GCF_000143085.1-RS_2025_12_13
2025-12-13
3,190
3,071
55
na
GCF_000143105.1
PRJNA264104
SAMN02953765
ACXQ00000000.2
reference genome
655,863
226,899
Grosmannia clavigera kw1407
strain=kw1407
na
latest
Scaffold
Major
Full
2011-01-31
Sanger-454-IlluminaPA_2.0
Michael Smith Laboratories at UBC
GCA_000143105.2
identical
https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/143/105/GCF_000143105.1_Sanger-454-IlluminaPA_2.0/
na
na
na
haploid
fungi
29,794,006
29,128,709
53.5
0
289
334
Michael Smith Laboratories at UBC
Annotation submitted by Michael Smith Laboratories at UBC
2023-12-29
8,311
8,311
0
21262841