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import unittest import import_ipynb import pandas as pd import pandas.testing as pd_testing import numpy.testing as np_testing import pandas as pd import numpy as np from sklearn import preprocessing from sklearn import ensemble from sklearn import model_selection from scipy import stats class Test(unittest.TestCase)...
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#!/usr/bin/env python # Noise2Void - 2D Example for SEM data from n2v.models import N2V import numpy as np from matplotlib import pyplot as plt from tifffile import imread from csbdeep.io import save_tiff_imagej_compatible # A previously trained model is loaded by creating a new N2V-object without providing a 'config'...
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// All content Copyright (C) 2018 Genomics plc #define BOOST_TEST_DYN_LINK #include <boost/test/unit_test.hpp> #include "io/read.hpp" #include "io/readRange.hpp" #include "io/readDataSet.hpp" #include "alignment/cigar.hpp" #include "alignment/cigarItems.hpp" #include "common.hpp" using wecall::io::Read; using wecall::...
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[STATEMENT] lemma splitting_lemma_left: assumes ex: "exact_seq ([C,B,A], [g,f])" and f': "f' \<in> hom B A" and inv: "(\<And>x. x \<in> carrier A \<Longrightarrow> f'(f x) = x)" and injf: "inj_on f (carrier A)" and surj: "g ` carrier B = carrier C" obtains H K where "H \<lhd> B" "K \<lhd> B" "H \<inter> K \<...
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''' Created on Apr 10, 2019 @author: chengzi ''' import os,sys,glob,math from PIL import Image import numpy as np from six.moves import cPickle as pickle import matplotlib.pyplot as plt import torch import torch.nn.functional as F from DepInvercs_model import DeepInverse block_size =33; dtype = torch.float32 d...
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import numpy as np from glob import glob from keras.models import Sequential, load_model from keras.layers import InputLayer, GlobalMaxPool2D, Dense # from dog_detector import dog_detector, from dog_detector import path_to_tensor # from human_detector import face_detector from extract_bottleneck_features import extra...
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import numpy as np import tensorflow as tf class VGG16Net(tf.keras.Model): def __init__(self, num_classes=3): super(VGG16Net, self).__init__() # self.block_1 = VGGBlock(conv_layers=2, filters=64) # self.block_2 = VGGBlock(conv_layers=2, filters=128) # self.block_3 = VGGBlock(conv_l...
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# -*- coding: utf-8 -*- """ Created on Thu Jun 11 11:19:32 2020 @author: luol2 """ from nltk.tokenize import word_tokenize from nltk.stem import WordNetLemmatizer from nltk.corpus import wordnet from nltk.stem.porter import PorterStemmer import nltk import numpy as np import json import copy import sys import argpars...
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@testset "999.available-captures-for-rook.jl" begin board = [ '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 'p' '.' '.' '.' '.' '.' '.' '.' 'R' '.' '.' '.' 'p' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' '.' 'p' '.' '.' '.' '.' '.' '....
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# Import the necessary packages and modules import matplotlib.pyplot as plt import numpy as np # Prepare the data x = np.linspace(0, 10, 100) # Plot the data plt.plot(x, x, label='linear') # Add a legend plt.legend() # Show the plot plt.show() print("done")
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#!/usr/bin/env python3 import matplotlib matplotlib.use('pdf') import scrublet as scr import scipy.io import scipy.sparse import numpy import numpy.ma from PIL import Image, ImageDraw, ImageFont import os import sys import re import warnings import traceback import argparse # # Notes: # o apply umi_cutoff in filte...
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[STATEMENT] theorem main\<^sub>P\<^sub>K\<^sub>B: \<open>G \<TTurnstile>\<^sub>!\<^sub>K\<^sub>B p \<longleftrightarrow> G \<turnstile>\<^sub>!\<^sub>K\<^sub>B p\<close> [PROOF STATE] proof (prove) goal (1 subgoal): 1. (G \<TTurnstile>\<^sub>!\<^sub>K\<^sub>B p) = (G \<turnstile>\<^sub>!\<^sub>K\<^sub>B p) [PROOF STEP...
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# the inclusion of the tests module is not meant to offer best practices for # testing in general, but rather to support the `find_packages` example in # setup.py that excludes installing the "tests" package from __future__ import print_function import networkx as nx from pyhwcomm import Compute, Transfer from pyhwc...
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# USAGE # python histogram_with_mask.py # import the necessary packages from matplotlib import pyplot as plt import numpy as np import cv2 def plot_histogram(image, title, mask=None): # split the image into its respective channels, then initialize # the tuple of channel names along with our figure for plotting cha...
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import os import pathlib import matplotlib.pyplot as plt import gdal import tensorflow as tf import numpy as np import sys import globalvars as g from data_generator import DataGenerator from model import get_model from included_vars import data_vars, vars_to_plot, operators print('Python version: %s' % sys.version)...
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import mxnet as mx import numpy as np from distutils.util import strtobool from ..processing.generate_anchor import generate_anchors from ..processing.bbox_transform import iou_pred, nonlinear_pred from ..processing.nms import py_nms_wrapper, cpu_nms_wrapper, gpu_nms_wrapper def check_equal(lst, errstr='check_equal'...
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import numpy as np from phenom.testing import prec_angle_helper as pah from phenom import HztoMf, m1_m2_M_q import lal f_gw_min=1. f_gw_max=700 df_gw=0.1 f_gw_ref=f_gw_min*2 Npts = int(np.ceil((f_gw_max - f_gw_min)/df_gw)) f_gw_list = lal.CreateREAL8Sequence(Npts) f_gw_list.data = np.arange(f_gw_min, f_gw_max, df_g...
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# Goal here is to automate saving out dithered positions (RA, Dec, rotTelPos) # for non-MAF users. See function documentation below for details. # # Humna Awan: humna.awan@rutgers.edu # ########################################################################################## import matplotlib matplotlib.use('Agg') imp...
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SUBROUTINE zcorec6 (IFTOLD, IFTNEW, CPOLD, CPNEW, * IBUFF1, KBUFF1, IBUFF2, KBUFF2, LDUP, ISTAT) C C C Copy a single record using buffered reads and writes. C This allows us to copy as big as record as in the file C (unlimited size). C The record can be copied from another file, or can be dup...
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/* @copyright Louis Dionne 2015 Distributed under the Boost Software License, Version 1.0. (See accompanying file LICENSE.md or copy at http://boost.org/LICENSE_1_0.txt) */ #include <boost/hana/ext/std/type_traits.hpp> #include <boost/hana/assert.hpp> #include <boost/hana/integral_constant.hpp> #include <boost/hana/...
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[STATEMENT] lemma uint_0_iff: "uint x = 0 \<longleftrightarrow> x = 0" [PROOF STATE] proof (prove) goal (1 subgoal): 1. (uint x = 0) = (x = 0) [PROOF STEP] by (auto simp add: unsigned_word_eqI)
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# Defined in Section 2.1.2 import numpy as np M = np.array([[0, 2, 1, 1, 1, 1, 1, 2, 1, 3], [2, 0, 1, 1, 1, 0, 0, 1, 1, 2], [1, 1, 0, 1, 1, 0, 0, 0, 0, 1], [1, 1, 1, 0, 1, 0, 0, 0, 0, 1], [1, 1, 1, 1, 0, 0, 0, 0, 0, 1], [1, 0, 0, 0, 0, 0, 1, 1, 0, ...
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(* Copyright 2014 Cornell University This file is part of VPrl (the Verified Nuprl project). VPrl is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option)...
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import numpy as np from scipy.optimize import curve_fit from utils import import_qchem from utils import utils from core.polymer_chain import Polymer from core.polymer_chain import RandomChargePolymer from argparse import ArgumentParser def run_partial_order_param(): description = "command line interface for run...
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# -*- coding : utf-8-*- import copy import json import os import zipfile import numpy as np import sqlalchemy from decimal import ROUND_HALF_UP, Decimal from PyAngle import Angle from numpy import loadtxt, pi from sqlalchemy import create_engine, event from sqlalchemy.orm import sessionmaker from xml.dom.minidom import...
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#!/usr/bin/env python3 # -*- coding: utf-8 -*- """ Created on 11/3/2020 15:06:33 2020 @author: cmg """ import numpy as np import matplotlib.pyplot as plt import timeit import active_subspaces as ss from astars.stars_sim import Stars_sim from astars.utils.misc import subspace_dist, find_active import pandas as pd ...
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import torch import torch.nn as nn import torch.nn.functional as F from torch.nn import init import numpy as np from .A2JPoseNet import RegressionModel, ClassificationModel, generate_anchors, shift from .pose_hrnet import get_pose_net class HRNetA2JPoseNet(nn.Module): def __init__(self, cfg): super(HRNetA2...
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import numpy as np import pandas as pd import pytest from anndata import AnnData from scipy import sparse import scanpy as sc from scanpy.preprocessing._qc import ( top_proportions, top_segment_proportions, describe_var, describe_obs, ) @pytest.fixture def anndata(): a = np.random.binomial(100, 0...
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import tensorflow from tensorflow.keras.layers import * from tensorflow.keras.models import * import os from tensorflow.keras.preprocessing import image from .net import MobileNetV2 import numpy as np from tensorflow.keras import backend as K class OrangeClassifier(): def __init__(self, model_path): ...
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# The abstract types provided by InteratomicPotentials.jl export AbstractPotential, NonTrainablePotential, TrainablePotential, EmpiricalPotential, MixedPotential """ AbstractPotential The abstract supertype of all interatomic potentials. """ abstract type AbstractPotential end include("types/abstract_potential.j...
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#ifndef HPENFACAG_HPP_INCLUDED #define HPENFACAG_HPP_INCLUDED #include <vector> #include <string> #include <boost/serialization/list.hpp> #include <boost/serialization/set.hpp> #include <boost/serialization/vector.hpp> #include <boost/serialization/deque.hpp> #include <caffe/util/math_functions.hpp> #include "arch/AA...
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#!/usr/bin/env python3 import rospy import numpy as np import math from std_msgs.msg import Float32 from std_msgs.msg import Int32 from sensor_msgs.msg import PointCloud2, PointField from sensor_msgs import point_cloud2 from visualization_msgs.msg import Marker, MarkerArray import os import open3d.ml as _ml3d import op...
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subroutine r8mktricub(x,nx,y,ny,z,nz,f,nf2,nf3, > ibcxmin,bcxmin,ibcxmax,bcxmax,inb1x, > ibcymin,bcymin,ibcymax,bcymax,inb1y, > ibczmin,bczmin,ibczmax,bczmax,inb1z, > ilinx,iliny,ilinz,ier) c c setup a tricubic spline...
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from __future__ import print_function # try to connect features that really ought to be connected: from matplotlib.pyplot import * from numpy import * import shapely.wkb,shapely.geometry try: from osgeo import ogr except ImportError: import ogr import sys import os.path import six from numpy.linalg import nor...
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mutable struct ILU0Preconditioner{Tv, Ti} <: AbstractExtendablePreconditioner{Tv,Ti} extmatrix::ExtendableSparseMatrix{Tv,Ti} xdiag::Array{Tv,1} idiag::Array{Ti,1} pattern_timestamp::Float64 end function ILU0Preconditioner(extmatrix::ExtendableSparseMatrix{Tv,Ti}) where {Tv,Ti} @assert size(extmat...
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using Documenter, EqualizerFilters makedocs( sitename="EqualizerFilters.jl", modules=[EqualizerFilters], pages = [ "index.md", "IndividualFilters.md", "TupleFormat.md", "SamplingRateSettings.md" ]) deploydocs(repo="github.com/Firionus/EqualizerFilters.jl.git")
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# -*- coding: utf-8 -*- """ Created on Thu Mar 5 07:39:31 2020 @author: lizet """ from numpy import array import os def rename_old( folder): # olds_files = array([file_name for file_name in name.parent.iterdir() if name.stem in file_name]) olds_files = [] for i in folder.parent.iterdi...
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import numpy as np def CO2_flux(DelCO2, grid_wind, unit='Pg'): """ Returns carbon flux in moles, g or Pg (1e15 g) of carbon (not CO2) per year. F = A * E * DeltaCO2 where: A is area in m2 E is the gas transfer coefficient (mol CO2 m-2 yr-1 uatm-1) from Wanninkhof (1992) ...
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import numpy as np import pandas as pd from sklearn import preprocessing from sklearn.impute import SimpleImputer continues = [0, 2, 4, 10, 11, 12] # 记录数值型数据的维度 categories = [1, 3, 5, 6, 7, 8, 9] # 记录类别型数的维度 # 类别数据转数值型 def cate_encode(arrays): enc = preprocessing.OrdinalEncoder() if len(arrays)...
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#include "RBGL.hpp" #include <boost/graph/graph_utility.hpp> using namespace boost; typedef adjacency_list<vecS, vecS, undirectedS, // vertex properties property<vertex_index_t, int, property<vertex_centrality_t, double> >, // edge properties property<edge_weight_t, double, property<e...
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import sys import dlib import numpy as np MAX_DIMENSION = 1024 WIDTH_MARGIN = 0.18 TOP_SHIFT = 0.2 class Edhead(object): def __init__(self): self.detector = dlib.get_frontal_face_detector() self.overlay = dlib.load_rgb_image('A1opZLgQdoL.jpg') def _preprocess(self, image): """Load ...
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[STATEMENT] lemma synth_trans: "\<lbrakk> X \<in> synth G; G \<subseteq> synth H \<rbrakk> \<Longrightarrow> X \<in> synth H" [PROOF STATE] proof (prove) goal (1 subgoal): 1. \<lbrakk>X \<in> synth G; G \<subseteq> synth H\<rbrakk> \<Longrightarrow> X \<in> synth H [PROOF STEP] by (drule synth_mono, blast)
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import IDONE import numpy as np import os from scipy.optimize import rosen def test_Rosenbrock(d): print(f"Testing IDONE on the {d}-dimensional Rosenbrock function with integer constraints.") print("The known global minimum is f(1,1,...,1)=0") lb = -5*np.ones(d).astype(int) # Lower bound ub = 10*np.ones(d).astype(...
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import numpy as np import pcl import pyrealsense2 as rs from swagscanner.scanner.d435 import D435 from swagscanner.scanner.kinect import Kinect import swagscanner.visualization.viewer as viewer class DepthProcessor(): '''Factory object creator to send processing to either 'fast' or 'slow' DepthProcessor objec...
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module Altro import TrajectoryOptimization import RobotDynamics using StaticArrays using BenchmarkTools using Interpolations using SolverLogging using Crayons using SparseArrays using LinearAlgebra using Logging using Statistics using TimerOutputs using ForwardDiff using FiniteDiff import Octavian const TO = Traject...
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#include <atomic> #include <chrono> #include <fstream> #include <future> #include <memory> #include <string> #include <tuple> #include <boost/asio/steady_timer.hpp> #include <boost/beast/core.hpp> #include <boost/beast/http.hpp> #include <boost/beast/version.hpp> #include <boost/filesystem.hpp> #include "TileManager...
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# Important to keep cv2 top import import cv2 import os import copy import json from collections import defaultdict import numpy as np import logging import torch import torchvision from detectron2.data.dataset_mapper import SimpleDatasetMapper import detectron2.utils from detectron2.utils import comm import detectron...
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import numpy as np from ..editortool import EditorTool from ... import util class ContourTool(EditorTool): def on_paint(self): if not self.is_mask: return self.canvas output = np.zeros(self.canvas.shape, dtype=np.uint8) util.draw.contours(output, self.canvas, (*self.color, 2...
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# Copyright (c) 2020 PaddlePaddle Authors. All Rights Reserved. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by appli...
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from collections import defaultdict import jsonlines import numpy as np import os import tagme import ujson import pandas as pd from tqdm import tqdm pd.options.display.max_colwidth = 500 from bootleg.symbols.constants import * def copy_candidates(from_alias, to_alias, alias2qids, max_candidates=30, qids_to_add=Non...
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%ADABOOSTC % % [W,V,ALF] = ADABOOSTC(A,CLASSF,N,RULE,VERBOSE); % % INPUT % A Dataset % CLASSF Untrained weak classifier % N Number of classifiers to be trained % RULE Combining rule (default: weighted voting) % VERBOSE Suppress progress report if 0 (default) % % OUTPUT % W Combined tr...
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import unittest import os import cPickle as pickle import skrf as rf import numpy as npy from nose.tools import nottest from nose.plugins.skip import SkipTest class CalibrationTest(object): ''' This is the generic Calibration test case which all Calibration Subclasses should be able to pass. They must im...
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"""Matrix Base Classes This file contains the base Matrix classes that represent a linear equation Gm=d. Where G is the design matrix of coefficients, m are the model parameters and d is the data array of observations. This file contains the following classes: * DesignMatrix - handles coefficients of an arbitrar...
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import pandas as pd import numpy as np import matplotlib.pyplot as plt import tensorflow as tf # List of all csv filenames GAS_TRAIN_DATA = 'CSV_Files/Gas Data Last Year.csv' GAS_TEST_DATA = 'CSV_Files/Gas Data Last Month.csv' GOLD_TRAIN_DATA = 'CSV_Files/Gold Data Last Year.csv' GOLD_TEST_DATA = 'CSV_Files/Gold Data ...
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\documentclass[11pt,a4paper]{book} \usepackage{graphicx} \begin{document} \title{Book: How to Structure a LaTeX Document} \author{Author1 \and Author2 \and ...} \date{\today} \maketitle \frontmatter \chapter{Preface} \mainmatter \chapter{First chapter} \section{Section Title 1} \section{Sec...
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# под вопросом. пока не подключаем "strftime(\"%F/%H\", now())" strftime{T<:DateTime}(fmt::AbstractString, t::T) = Libc.strftime(fmt,Dates.datetime2unix(t)) "strftime(\"%F\", Dates.today())" strftime{T<:Date}(fmt::AbstractString, d::T) = strftime(fmt,DateTime(d)) """ [Dates.Date(2016,4,1), Dates.Date...
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try: from lapjv import lapjv # from scipy.optimize import linear_sum_assignment segment = False except ImportError: print('Module lap not found, emulating with much slower scipy.optimize.linear_sum_assignment') segment = True from scipy.optimize import linear_sum_assignment import random import...
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[STATEMENT] lemma rel_witness_gpv_sel [simp]: "the_gpv (rel_witness_gpv A C R R' (gpv, gpv')) = map_spmf (map_generat id id (\<lambda>(rpv, rpv'). (rel_witness_gpv A C R R' \<circ> rel_witness_fun R R' (rpv, rpv'))) \<circ> rel_witness_generat) (rel_witness_spmf (rel_generat A C (rel_fun (R OO R') (rel_gpv'...
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# Copyright (c) 2018 PaddlePaddle Authors. All Rights Reserved. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by app...
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#!/usr/bin/env python """ Created on Wed Feb 26 16:23:30 2014 @author: Bodangles """ import os import numpy as np import tables import glob import matplotlib.pyplot as plt import pdb class BeamSelector(object): """This class will take in a numpy array with the first column being the beam numbers the second c...
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import numpy as np import cv2 from glob import glob from tqdm import tqdm bird_imgs_train = glob('../Data/bird_or_bicycle/0.0.3/train/bird/*') bicycle_imgs_train = glob('../Data/bird_or_bicycle/0.0.3/train/bicycle/*') bird_imgs_test = glob('../Data/bird_or_bicycle/0.0.3/test/bird/*') bicycle_imgs_test = glob('../Data...
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import pandas as pd import numpy as np import matplotlib.pyplot as plt from sklearn.preprocessing import MinMaxScaler from sklearn.model_selection import train_test_split, GridSearchCV from sklearn.metrics import make_scorer, f1_score, classification_report from sklearn.tree import DecisionTreeClassifier # adult_inc...
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import networkx as nx import math from the_traffic_magic import get_pareto_traffic_one from helper_scratch import chunks, connect_to_db, EdgeNames, graph_open from dbhelper_scratch import database_commit, get_all_sd_using_this, get_first_last_from_id, add_to_frist_last, add_to_a c, conn = connect_to_db() database_com...
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% !TeX root = ../main.tex % Add the above to each chapter to make compiling the PDF easier in some editors. \chapter{Introduction}\label{chapter:introduction} \section{The Isabelle Proof Assistant} \section{The B-Tree Data Structure} Citation test~\parencite{latex}. \subsection{Definition} See~\autoref{tab:sample}...
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#= Copyright (c) 2015, Intel Corporation All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: - Redistributions of source code must retain the above copyright notice, this list of conditions and the follo...
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[STATEMENT] lemma no_step_none: "step e s r aa ba = None \<Longrightarrow> \<not> recognises_execution e s r ((aa, ba) # p)" [PROOF STATE] proof (prove) goal (1 subgoal): 1. step e s r aa ba = None \<Longrightarrow> \<not> recognises_execution e s r ((aa, ba) # p) [PROOF STEP] using recognises_cons_step [PROOF STATE...
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from __future__ import division, print_function from sklearn.feature_extraction.text import TfidfVectorizer from collections import defaultdict from sklearn import decomposition import json import os import numpy as np import pandas as pd class NMF: """ Class for NMF model. This is a wrapper for sklearn....
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!*==dlarrk.f90 processed by SPAG 7.51RB at 20:08 on 3 Mar 2022 !> \brief \b DLARRK computes one eigenvalue of a symmetric tridiagonal matrix T to suitable accuracy. ! ! =========== DOCUMENTATION =========== ! ! Online html documentation available at ! http://www.netlib.org/lapack/explore-html/ ! !> \htmlo...
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# A 1D model with no-flux walls at ends. # in this case, the orientation becomes +-1 from ald.rtp.rtpcompiler import AbstractCompiler from jinja2 import Template from ald.rtp.rtpkernels import AbstractRTPKernel import pycuda.gpuarray as gpuarray import numpy as np from ald.rtp.rtpsimulator import RTPSimulator import py...
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from __future__ import absolute_import import wx from wx.lib.pubsub import pub import wx.lib.layoutf as layoutf import numpy as np import threading import warnings import psutil import time import os import sys import pickle import glob from astropy.io import fits from astropy import wcs from astropy.coordinates import...
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*DECK DBSPVD SUBROUTINE DBSPVD (T, K, NDERIV, X, ILEFT, LDVNIK, VNIKX, WORK) C***BEGIN PROLOGUE DBSPVD C***PURPOSE Calculate the value and all derivatives of order less than C NDERIV of all basis functions which do not vanish at X. C***LIBRARY SLATEC C***CATEGORY E3, K6 C***TYPE DOUBLE PRECIS...
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DOUBLE PRECISION FUNCTION DT_SANO(Ecm) C*********************************************************************** C This version dated 31.07.96 is written by S. Roesler * C*********************************************************************** IMPLICIT NONE DOUBLE PRECISION afra1 , ...
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#!/usr/bin/python #coding:utf-8 # *************************************************************** # 绘制正态分布曲线 # author: pruce # email: 1756983926@qq.com # date: 20180919 # *************************************************************** import numpy as np import matplotlib.mlab as mlab import matplotlib.pyplot ...
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# -*- coding: utf-8 -*- import sys import numpy from HiddenLayer import HiddenLayer from LogisticRegression import LogisticRegression from utils import * class Dropout(object): def __init__(self, input, label,\ n_in, hidden_layer_sizes, n_out,\ rng=None, activation=ReLU): ...
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[STATEMENT] lemma shadow_root_delete_get_6 [simp]: "delete\<^sub>S\<^sub>h\<^sub>a\<^sub>d\<^sub>o\<^sub>w\<^sub>R\<^sub>o\<^sub>o\<^sub>t shadow_root_ptr h = Some h' \<Longrightarrow> get\<^sub>C\<^sub>h\<^sub>a\<^sub>r\<^sub>a\<^sub>c\<^sub>t\<^sub>e\<^sub>r\<^sub>D\<^sub>a\<^sub>t\<^sub>a character_data_ptr h' = get...
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# Integer Functions # TODO: vector types const generic_integer_types = [Cchar, Cuchar, Cshort, Cushort, Cint, Cuint, Clong, Culong] # generically typed for gentype in generic_integer_types @eval begin @device_override Base.abs(x::$gentype) = @builtin_ccall("abs", $gentype, ($gentype,), x) @device_function abs_diff...
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# Copyright (c) Facebook, Inc. and its affiliates. All Rights Reserved. #!/usr/bin/env python import glob import os import numpy as np import torch from setuptools import find_packages from setuptools import setup, Extension from torch.utils.cpp_extension import CUDA_HOME from torch.utils.cpp_extension import CppExte...
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module ProgressiveAligner push!(LOAD_PATH, dirname(@__FILE__())) #export DataReader, # DataWriter, # ProfileAligner, # Clustering include("DataReader.jl") include("DataWriter.jl") include("ProfileAligner.jl") include("Clustering.jl") end # module
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import numpy as np def msaeye(msa, unique, turbo): tic1 = timeit.default_timer() length = msa.shape[1] number = msa.shape[0] # number = 5 array = np.eye(int(number)) seqs = [] for i in range(number): seqs.append(msa[i,:]) iseq = np.zeros((number, length), dtype=int) for i ...
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function value = r4_besi1e ( x ) %*****************************************************************************80 % %% R4_BESI1E: exponentially scaled Bessel function I of order 1 of an R4 argument. % % Licensing: % % This code is distributed under the GNU LGPL license. % % Modified: % % 29 September 2011 % % ...
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! Rice test ! ROSE's unparser fails an assertion on an empty character string constant. ! It doesn't matter whether single or double quotes are used. program empty_string_constant character(*), parameter :: c1 = "" , c3 = '', c4 = "Zung" ! produces assertion failure in testTranslator character(len = 8) :: c2 = '' ...
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#include <stdio.h> #include <stdlib.h> #include <math.h> #include <string.h> #include <float.h> #include <iostream> #include <armadillo> #include <tuple> #include "sys.h" #include "grid.h" #include "vtk_functions.h" using namespace std; typedef struct { double minMag; double maxMag; double range; } SYS...
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""" Cokriging example from [Forrester 2007] to show MultiFiMetaModel and MultiFiCoKrigingSurrogate usage """ import numpy as np from openmdao.api import Component, Group, Problem, MultiFiMetaModel, MultiFiCoKrigingSurrogate, KrigingSurrogate def model_hifi(x): return ((6*x-2)**2)*np.sin((6*x-2)*2) def model_lof...
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#!/usr/bin/env python # coding: utf-8 from qiskit.aqua.components.optimizers import COBYLA, ADAM, SPSA from qiskit.circuit.library import ZZFeatureMap, RealAmplitudes, ZFeatureMap, PauliFeatureMap from Benchmarking import Benchmark, normalize_data import csv import numpy as np import pandas as pd from sklearn.prepr...
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""" Module documentation: https://medium.com/codingthesmartway-com-blog/the-machine-learning-crash-course-part-2-linear-regression-6a5955792109 __author__ = "R" __copyright__ = "" __credits__ = ["Sebastian Eschweiler"] __license__ = "GPL" __version__ = "1.0" __maintainer__ = "R" __email__ = "~" __status__ = "P...
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# -*- coding: utf-8 -*- """Auto-Encoder-v0.ipynb Automatically generated by Colaboratory. Original file is located at https://colab.research.google.com/drive/19KI_q17bSNNI3LNAD9R1x-HCSXl3sZsf """ # Commented out IPython magic to ensure Python compatibility. # %tensorflow_version 2.x import time import torch imp...
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#ifndef SEARCH_NBEST__ #define SEARCH_NBEST__ #include "search/applied.hh" #include "search/config.hh" #include "search/edge.hh" #include <boost/pool/object_pool.hpp> #include <cstddef> #include <queue> #include <vector> #include <assert.h> namespace search { class NBestList; class NBestList { private: cla...
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# -*- coding: utf-8 -*- """ Author: Philip Anfinrud, Brian Mahon, Friedrich Schotte Date created: 12/8/2016 Date last modified: 10/17/2017 2017-06-02 1.5 Adapted for 3-way injection port 2017-10-06 1.6 Friedrich, Using IOC 2017-10-17 1.7 Brian, Friedrich, refill_1, refill_3 Setup: Start desktop shortcut "Centris Syri...
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"""A binary to train using a single GPU. """ from __future__ import absolute_import from __future__ import division from __future__ import print_function import sys import os.path import math import numpy as np from six.moves import xrange # pylint: disable=redefined-builtin import tensorflow as tf from tensorflow.co...
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import torch import numpy as np import torch.nn as nn import torch.nn.functional as F def cross_entropy2d(input, target, weight=None, size_average=True): n, c, h, w = input.size() nt, ht, wt = target.size() weights = [5.2406, 1.0, 0.0088] class_weights = torch.FloatTensor(weights).cuda() # Handle ...
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import numpy as np from typing import Tuple from numpy.typing import ArrayLike from liegroups.numpy import SO2, SE2, SO3, SE3 from numpy import sin, cos def angle_to_se2(a: float, theta: float) -> SE2: """Transform a single set of DH parameters into an SE2 matrix :param a: link length :param theta: rotati...
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function funcplus(func1, funcs...) function (k...) v = func1(k...) for func in funcs v += func(k...) end v end end function functimes(func1, funcs...) function (k...) v = func1(k...) for func in funcs v *= func(k...) end v end end
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import geopandas import numpy as np import pandas as pd import matplotlib as mpl import matplotlib.pyplot as plt from matplotlib.animation import FuncAnimation from mpl_toolkits.axes_grid1 import make_axes_locatable from matplotlib.backends.backend_pdf import PdfPages from matplotlib import cm import matplotlib.ticker ...
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import numpy as np import matplotlib.pyplot as plt deepsea="/home/fast/onimaru/encode/deepsea/deepsea_pred.txt" deepshark="/home/fast/onimaru/encode/deepsea/deepshark_Tue_Apr_17_183529_2018.ckpt-57883_prediction.log" deepsea_dict={} with open(deepsea, 'r') as fin: for line in fin: if not line.startswith...
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import json import codecs import numpy as np import plotly.express as px import streamlit as st import os class Web: def __init__(self): self.ruta_menus = os.path.join("scraper_siglas-uc", "outputs", "menus.json") self.min_rec = 4 self.max_rec = 30 self.step_rec = 2 ...
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! { dg-do compile } ! { dg-options "-fimplicit-none" } ! ! PR 41121: [4.5 Regression] compile-time error when building BLAS with -fimplicit-none ! ! Original test case: http://www.netlib.org/blas/dgbmv.f ! Reduced by Joost VandeVondele <jv244@cam.ac.uk> INTRINSIC MIN INTEGER :: I,J print *,MIN(I,J) END
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[STATEMENT] lemma maxr_lg: "\<lbrakk>Suc 0 < x; Suc 0 < y\<rbrakk> \<Longrightarrow> Maxr lgR [x, y] x = lg x y" [PROOF STATE] proof (prove) goal (1 subgoal): 1. \<lbrakk>Suc 0 < x; Suc 0 < y\<rbrakk> \<Longrightarrow> Maxr lgR [x, y] x = lg x y [PROOF STEP] apply(auto simp add: lg.simps Maxr.simps) [PROOF STATE] proo...
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from sympl import ( AdamsBashforth, PlotFunctionMonitor) from climt import ( Frierson06LongwaveOpticalDepth, GrayLongwaveRadiation, SimplePhysics, DryConvectiveAdjustment, SlabSurface, get_default_state) import climt import datetime import numpy as np import sympl from datetime import timedelta import m...
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""" Training a seq2bow encoder-decoder model ======================================== """ from tmnt.estimator import SeqBowEstimator import numpy as np import gluonnlp as nlp import os import mxnet as mx import logging from sklearn.datasets import fetch_20newsgroups from tmnt.preprocess.vectorizer import TMNTVectorizer...
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import os import sys import numpy as np import random import string import tensorflow as tf from tensorflow.models.rnn import rnn, rnn_cell import collections import urllib import zipfile url = 'http://mattmahoney.net/dc/' def maybe_download(filename, expected_bytes): """Download a file if not present, and make sur...
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