HDR Imageomics Institute org
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egrace479 changed pull request status to open
HDR Imageomics Institute org

@thompsonmj could you review the README update? I tried to clarify the files, but am wondering if I should reorganize, or just add something like "[Outdated]" to the ones referencing and only using v1-dev-names.csv.

HDR Imageomics Institute org

I would request that, for clarity, the names of some of the files be changed to be more intuitive.

  • statistics.csv -> catalog.csv
  • v1-dev-names.csv -> catalog_v1.0.csv (clearly tagged so as to remain stationary, maintains an intuitive semantic link to the up-to-date file)
  • ToL_stats_EDA.ipynb (and .py) -> ToL_catalog_EDA.ipynb (and .py)
HDR Imageomics Institute org

Sounds good (especially since the file will be renamed as output from the data-generation script).

HDR Imageomics Institute org

Renamed the fixed file as catalog-v1-dev.csv, where the dev is intended to mean it is not a finished product, leaves room to have v1 at end of this iteration without requiring . in filename (National Archives best practices).

I believe I captured all references to the catalog files (in the notebooks, README, missing taxa output, gitattributes). @thompsonmj , look good?

HDR Imageomics Institute org

Looks good!

egrace479 changed pull request status to merged

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