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Some formatting fixes and data collection ref clarification

#6
by egrace479 - opened
Files changed (1) hide show
  1. README.md +44 -37
README.md CHANGED
@@ -2,8 +2,9 @@
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  license: cc0-1.0
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  language:
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  - en
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- pretty_name: mmla_wilds
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- task_categories: [image-classification]
 
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  tags:
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  - biology
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  - image
@@ -11,21 +12,28 @@ tags:
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  - CV
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  - drone
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  - zebra
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- - "African Painted Dog"
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- - "Persian Onanger"
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  - giraffe
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  - Grevy's
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  size_categories: 10K<n<100K
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- description: "Annotated video frames of giraffes, Grevy's zebras, Persian onagers, and African Painted Dogs collected at The Wilds in Ohio. This dataset is intended for use in training and evaluating computer vision models for animal detection and classification from drone imagery. It includes frames from various sessions, with annotations indicating the presence of animals in the images in YOLO format, and is designed to facilitate research in wildlife monitoring and conservation using autonomous drones."
 
 
 
 
 
 
 
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  configs:
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- - config_name: African-painted-dogs
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- data_files: session_1/*/*.jpg
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- - config_name: Persion-onangers
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- data_files: session_2/*/*.jpg
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- - config_name: Giraffes
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- data_files: session_3/*/*.jpg
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- - config_name: Grevys-zebras
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- data_files: session_4/*/*.jpg
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  ---
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@@ -34,7 +42,7 @@ configs:
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  <!-- Provide a quick summary of what the dataset is or can be used for. -->
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  ## Dataset Details
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- This dataset contains annotated video frames of giraffes, Grevy's zebras, Persian onagers, and African Painted Dogs, collected at [The Wilds](https://www.thewilds.org/) in Ohio. The dataset is intended for use in training and evaluating computer vision models for animal detection and classification from drone imagery. The dataset includes frames from various sessions, with annotations indicating the presence of animals in the images in YOLO format. The dataset is designed to facilitate research in wildlife monitoring and conservation using autonomous drones.
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39
 
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  ### Dataset Description
@@ -70,7 +78,7 @@ See the [fine-tuned YOLO11m model](https://huggingface.co/imageomics/mmla) that
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  ## Dataset Structure
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  ```
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  /dataset/
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- README.md
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  session_1/
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  partition_1/
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  DJI_0034_000000.jpg
@@ -104,29 +112,30 @@ See the [fine-tuned YOLO11m model](https://huggingface.co/imageomics/mmla) that
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  P0070007/
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  P0070007_000000.jpg
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  P0070007_000000.txt
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- ...
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  P0080008/
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- ...
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  P0090009/
111
- ...
112
  P0100010/
113
- ...
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  P0110011/
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- ...
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  P0120012/
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- ...
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  P0160016/
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- ...
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- P0160016_000598.txt
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- session_4/P0070010
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- P0070010_000000.jpg
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- P0070010_000000.txt
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- ...
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- P0070010_000505.txt
 
126
  ```
127
 
128
  ### Data Instances
129
- All images are names <video_id>_<frame_number>.jpg, each within a folder named for the date of the session. The annotations are in YOLO format and are stored in a corresponding .txt file with the same name as the image.
130
 
131
 
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  ### Data Fields
@@ -144,11 +153,9 @@ All images are names <video_id>_<frame_number>.jpg, each within a folder named f
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  - `width`: Width of the bounding box (normalized to [0, 1])
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  - `height`: Height of the bounding box (normalized to [0, 1])
146
 
147
- <!-- ### Data Splits
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- [More Information Needed] -->
149
- <!--
150
- Give your train-test splits for benchmarking; could be as simple as "split is indicated by the `split` column in the metadata file: `train`, `val`, or `test`." Or perhaps this is just the training dataset and other datasets were used for testing (you may indicate which were used).
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- -->
152
 
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  ## Dataset Creation
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@@ -169,7 +176,7 @@ The dataset was created to facilitate research in wildlife monitoring and conser
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  This is what _you_ did to it following collection from the original source; it will be overall processing if you collected the data initially.
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  -->
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172
- The African Painted Dog missions were collected manually using a [DJI Mavic Mini drone](https://www.dji.com/support/product/mavic-mini), while the Giraffe, Persian Onanger, and Grevy's Zebra missions were collected using a [Parrot Anafi drone](https://www.parrot.com/us/drones/anafi). The Grevy's zebras and giraffe missions were conducted semi-autonomously using the [WildWing system](https://imageomics.github.io/wildwing/), while the Persian onager data was collected manually. The drones were flown over the Wilds Conservation Center in Ohio, capturing video footage of the animals in their natural habitat.
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174
 
175
  The videos were annotated manually using the Computer Vision Annotation Tool ([CVAT](https://www.cvat.ai/)) and the [kabr-tools](https://github.com/Imageomics/kabr-tools) library. These detection annotations and original video files were then processed to extract individual frames, which were saved as JPEG images. The annotations were converted to YOLO format, with bounding boxes indicating the presence of zebras in each frame.
@@ -205,7 +212,7 @@ The dataset was cleaned to remove any personal or sensitive information.
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  ## Licensing Information
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- This dataset is dedicated to the public domain for the benefit of scientific pursuits. We ask that you cite the dataset and journal paper using the below citations if you make use of it in your research.
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  ## Citation
211
 
@@ -241,7 +248,7 @@ This dataset is dedicated to the public domain for the benefit of scientific pur
241
  }
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  ```
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- If you use this dataset, please cite the [WildWing video dataset](https://huggingface.co/datasets/imageomics/wildwingdeployment) used to generate data for sessions 2-4.
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246
  **Related Papers**
247
  ```
 
2
  license: cc0-1.0
3
  language:
4
  - en
5
+ pretty_name: MMLA The Wilds
6
+ task_categories:
7
+ - image-classification
8
  tags:
9
  - biology
10
  - image
 
12
  - CV
13
  - drone
14
  - zebra
15
+ - African Painted Dog
16
+ - Persian Onanger
17
  - giraffe
18
  - Grevy's
19
  size_categories: 10K<n<100K
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+ description: >-
21
+ Annotated video frames of giraffes, Grevy's zebras, Persian onagers, and
22
+ African Painted Dogs collected at The Wilds in Ohio. This dataset is intended
23
+ for use in training and evaluating computer vision models for animal detection
24
+ and classification from drone imagery. It includes frames from various
25
+ sessions, with annotations indicating the presence of animals in the images in
26
+ YOLO format, and is designed to facilitate research in wildlife monitoring and
27
+ conservation using autonomous drones.
28
  configs:
29
+ - config_name: African-painted-dogs
30
+ data_files: session_1/*/*.jpg
31
+ - config_name: Persion-onangers
32
+ data_files: session_2/*/*.jpg
33
+ - config_name: Giraffes
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+ data_files: session_3/*/*.jpg
35
+ - config_name: Grevys-zebras
36
+ data_files: session_4/*/*.jpg
37
  ---
38
 
39
 
 
42
  <!-- Provide a quick summary of what the dataset is or can be used for. -->
43
 
44
  ## Dataset Details
45
+ This dataset contains annotated video frames of giraffes, Grevy's zebras, Persian onagers, and African Painted Dogs, collected at [The Wilds](https://www.thewilds.org/) in Ohio. The dataset is intended for use in training and evaluating computer vision models for animal detection and classification from drone imagery. It includes frames from various sessions, with annotations indicating the presence of animals in the images in YOLO format, and is designed to facilitate research in wildlife monitoring and conservation using autonomous drones.
46
 
47
 
48
  ### Dataset Description
 
78
  ## Dataset Structure
79
  ```
80
  /dataset/
81
+ classes.txt
82
  session_1/
83
  partition_1/
84
  DJI_0034_000000.jpg
 
112
  P0070007/
113
  P0070007_000000.jpg
114
  P0070007_000000.txt
115
+ ...
116
  P0080008/
117
+ ...
118
  P0090009/
119
+ ...
120
  P0100010/
121
+ ...
122
  P0110011/
123
+ ...
124
  P0120012/
125
+ ...
126
  P0160016/
127
+ ...
128
+ P0160016_000598.txt
129
+ session_4/
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+ P0070010/
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+ P0070010_000000.jpg
132
+ P0070010_000000.txt
133
+ ...
134
+ P0070010_000505.txt
135
  ```
136
 
137
  ### Data Instances
138
+ All images are named `<video_id>_<frame_number>.jpg`, under the particular session and full video to which they belong; these can be matched to dates based on the table above. The annotations are in YOLO format and are stored in a corresponding `.txt` file with the same name as the image.
139
 
140
 
141
  ### Data Fields
 
153
  - `width`: Width of the bounding box (normalized to [0, 1])
154
  - `height`: Height of the bounding box (normalized to [0, 1])
155
 
156
+ ### Data Splits
157
+
158
+ This dataset was used in conjunction with the other two [MMLA datasets](https://huggingface.co/collections/imageomics/mmla) for both training and testing the [MMLA YOLO model](https://huggingface.co/imageomics/mmla#training-details).
 
 
159
 
160
  ## Dataset Creation
161
 
 
176
  This is what _you_ did to it following collection from the original source; it will be overall processing if you collected the data initially.
177
  -->
178
 
179
+ The African Painted Dog missions were collected manually using a [DJI Mavic Mini drone](https://www.dji.com/support/product/mavic-mini), while the Giraffe, Persian Onanger, and Grevy's Zebra missions were collected using a [Parrot Anafi drone](https://www.parrot.com/us/drones/anafi). The Grevy's zebras and giraffe missions were conducted semi-autonomously using the [WildWing system](https://imageomics.github.io/wildwing/), while the Persian onager data was collected manually. The drones were flown over the [Wilds Conservation Center](https://www.thewilds.org/) in Ohio, capturing video footage of the animals in their natural habitat.
180
 
181
 
182
  The videos were annotated manually using the Computer Vision Annotation Tool ([CVAT](https://www.cvat.ai/)) and the [kabr-tools](https://github.com/Imageomics/kabr-tools) library. These detection annotations and original video files were then processed to extract individual frames, which were saved as JPEG images. The annotations were converted to YOLO format, with bounding boxes indicating the presence of zebras in each frame.
 
212
 
213
  ## Licensing Information
214
 
215
+ This dataset is dedicated to the public domain (by applying the [CC0-1.0 Public Domain Waiver](https://creativecommons.org/publicdomain/zero/1.0/)) for the benefit of scientific pursuits. We ask that you cite the dataset and journal paper using the below citations if you make use of it in your research.
216
 
217
  ## Citation
218
 
 
248
  }
249
  ```
250
 
251
+ If you use this dataset, please also cite the [WildWing video dataset](https://huggingface.co/datasets/imageomics/wildwingdeployment) used to generate data for sessions 2-4.
252
 
253
  **Related Papers**
254
  ```