GotPsi / src /core /config.py
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"""
Configuration management for the GotPsi data cleaning pipeline.
Handles loading and validation of YAML configuration files.
"""
from pathlib import Path
from typing import Any, Dict
import yaml
from .exceptions import ConfigurationError
class Config:
"""
Configuration manager for the data cleaning pipeline.
Loads configuration from YAML file and provides typed access
to configuration values.
"""
def __init__(self, config_path: str | Path):
"""
Initialize configuration from YAML file.
Args:
config_path: Path to the YAML configuration file
Raises:
ConfigurationError: If config file is missing or invalid
"""
self.config_path = Path(config_path)
self._config: Dict[str, Any] = {}
self._load_config()
self._validate_config()
def _load_config(self) -> None:
"""Load configuration from YAML file."""
if not self.config_path.exists():
raise ConfigurationError(
f"Configuration file not found: {self.config_path}"
)
try:
with open(self.config_path, 'r') as f:
self._config = yaml.safe_load(f)
except yaml.YAMLError as e:
raise ConfigurationError(
f"Failed to parse configuration file: {e}"
)
def _validate_config(self) -> None:
"""Validate that required configuration keys exist."""
required_sections = [
'directories',
'processing',
'encoding',
'delimiters',
'temporal',
'schema',
'quality',
'export',
'datasets',
'logging'
]
missing = [s for s in required_sections if s not in self._config]
if missing:
raise ConfigurationError(
f"Missing required configuration sections: {missing}"
)
def get(self, key: str, default: Any = None) -> Any:
"""
Get configuration value by key.
Supports dot notation for nested keys (e.g., 'directories.raw_data')
Args:
key: Configuration key (supports dot notation)
default: Default value if key not found
Returns:
Configuration value or default
"""
keys = key.split('.')
value = self._config
for k in keys:
if isinstance(value, dict):
value = value.get(k)
if value is None:
return default
else:
return default
return value
def set(self, key: str, value: Any) -> None:
"""
Set configuration value by key.
Supports dot notation for nested keys (e.g., 'processing.audit_mode')
Args:
key: Configuration key (supports dot notation)
value: Value to set
"""
keys = key.split('.')
config = self._config
# Navigate to the parent dict
for k in keys[:-1]:
if k not in config:
config[k] = {}
config = config[k]
# Set the final value
config[keys[-1]] = value
def __getitem__(self, key: str) -> Any:
"""Get configuration value using dict-like syntax."""
value = self.get(key)
if value is None:
raise KeyError(f"Configuration key not found: {key}")
return value
@property
def raw_data_dir(self) -> Path:
"""Get raw data directory as Path object."""
return Path(self.get('directories.raw_data', 'data/'))
@property
def output_dir(self) -> Path:
"""Get output directory as Path object."""
return Path(self.get('directories.output', 'output/'))
@property
def logs_dir(self) -> Path:
"""Get logs directory as Path object."""
return Path(self.get('directories.logs', 'logs/'))
@property
def supplemental_dir(self) -> Path:
"""Get supplemental directory as Path object."""
return Path(self.get('directories.supplemental', 'supplemental/'))
@property
def chunk_size(self) -> int:
"""Get processing chunk size."""
return self.get('processing.chunk_size', 50000)
@property
def n_workers(self) -> int:
"""Get number of parallel workers."""
return self.get('processing.n_workers', 0)
def dataset_config(self, dataset_name: str) -> Dict[str, Any]:
"""
Get configuration for a specific dataset.
Args:
dataset_name: Name of the dataset
Returns:
Dataset configuration dictionary
Raises:
ConfigurationError: If dataset not configured
"""
datasets = self.get('datasets', {})
if dataset_name not in datasets:
raise ConfigurationError(
f"Dataset '{dataset_name}' not found in configuration"
)
return datasets[dataset_name]