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"""Setup MARBLE.""" |
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import numpy |
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from Cython.Build import cythonize |
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from setuptools import Extension |
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from setuptools import find_packages |
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from setuptools import setup |
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setup( |
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name="MARBLE", |
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version="1.0", |
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author="Adam Gosztolai", |
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author_email="a.gosztolai@gmail.com", |
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description="""Package for the unsupervised data-driven representation of non-linear dynamics |
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over manifolds based on a statistical distribution of local flow fields""", |
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long_description=open("README.md", "r").read(), |
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long_description_content_type="text/markdown", |
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install_requires=[ |
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"matplotlib", |
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"pandas", |
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"numpy<2.0", |
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"scipy", |
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"networkx", |
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"seaborn", |
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"torch", |
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"pympl", |
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"tensorboardX", |
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"pyyaml", |
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"POT", |
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"umap-learn", |
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"mat73", |
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"wget", |
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], |
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packages=find_packages(), |
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include_package_data=True, |
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package_data={"MARBLE.lib": ["ptu_dijkstra.pyx", "ptu_dijkstra.c"]}, |
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ext_modules=cythonize( |
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Extension( |
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"ptu_dijkstra", ["MARBLE/lib/ptu_dijkstra.pyx"], include_dirs=[numpy.get_include()] |
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) |
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), |
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) |
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