molmoda / data /src /UI /Navigation /TreeView /TreeInterfaces.ts
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/* eslint-disable @typescript-eslint/no-empty-interface */
/* eslint-disable @typescript-eslint/ban-types */
export interface IAtom {
chain: string;
resi: number;
resn: string;
serial?: number;
atom?: string; // atom name
altLoc?: string;
pdbline?: string;
x?: number;
y?: number;
z?: number;
b?: number;
elem?: string;
bonds?: number[];
index?: number;
bondOrder: number[];
hetflag?: boolean;
}
export enum TreeNodeType {
Protein = "protein",
Nucleic = "nucleic",
Compound = "compound",
Metal = "metal",
Lipid = "lipid",
Ions = "ions",
Solvent = "solvent",
Region = "region",
Other = "other" // For things like fpocket volume atoms
}
export enum SelectedType {
False = "false",
True = "true",
ChildOfTrue = "child_of_true",
}
export enum RegionType {
Sphere = "Sphere",
Box = "Box",
Arrow = "Arrow",
Cylinder = "Cylinder",
}
// export class Region {
// // All regions can have these properties
// type: RegionType;
// center: [number, number, number];
// opacity?: number;
// color?: string;
// movable?: boolean; // Whether you can move or resize
// // Spheres and arrows have radius
// radius?: number;
// // x/y/z size for box
// dimensions?: [number, number, number];
// // arrow only (uses radius too). Also cylinder.
// endPt?: [number, number, number]; // center is start pt
// radiusRatio?: number; // Radius of arrow head is radiusRatio * radius
// // Cylinder only
// dashed?: boolean;
// constructor(params: IRegion | ISphere | IBox | IArrow | ICylinder) {
// this.type = params.type;
// this.center = params.center;
// this.opacity = params.opacity;
// this.color = params.color;
// this.movable = params.movable;
// this.radius = (params as ISphere).radius;
// this.dimensions = (params as IBox).dimensions;
// this.endPt = (params as IArrow).endPt;
// this.radiusRatio = (params as IArrow).radiusRatio;
// this.dashed = (params as ICylinder).dashed;
// }
// }
export interface IRegion {
type: RegionType;
center: [number, number, number];
opacity?: number;
color?: string;
movable?: boolean; // Whether you can move or resize
}
export interface ISphere extends IRegion {
radius: number;
}
export interface IBox extends IRegion {
// x/y/z size for box
dimensions: [number, number, number];
}
export interface IArrow extends IRegion {
endPt: [number, number, number]; // center is start pt
radius?: number;
radiusRatio?: number; // Radius of arrow head is radiusRatio * radius
}
export interface ICylinder extends IRegion {
endPt: [number, number, number]; // center is start pt
radius?: number;
dashed?: boolean;
}
export enum TreeNodeDataType {
Table,
Graph,
}
export enum TableHeaderSort {
All, // default
AllButFirst,
None
}
export interface ITreeNodeData {
// Varies depending on type. TODO: Make more specific using ||
data: any; // Should be like {}, I think.
type: TreeNodeDataType;
// The TreeNode that this data is associated with. It's the id to avoid
// circular references when serializing.
treeNodeId?: string;
headerSort?: TableHeaderSort;
}
// export interface IResidue extends TreeNode {}
// Below is used by the FormSelectRegion component in its emits.
export interface ISphereOrBox {
center: [number, number, number];
radius?: number;
dimensions?: [number, number, number];
}