Datasets:
idx int64 1.16k 140k | cdr3.alpha stringlengths 6 23 | v.alpha stringclasses 60
values | j.alpha stringclasses 56
values | cdr3.beta stringlengths 7 22 | v.beta stringclasses 64
values | d.beta stringclasses 6
values | j.beta stringclasses 13
values | species stringclasses 2
values | mhc.a stringclasses 54
values | mhc.b stringclasses 17
values | mhc.class stringclasses 2
values | antigen.epitope stringclasses 194
values | antigen.gene stringclasses 98
values | antigen.species stringclasses 25
values | reference.id stringclasses 173
values | method.identification stringclasses 25
values | method.frequency stringclasses 485
values | method.singlecell stringclasses 1
value | method.sequencing stringclasses 6
values | method.verification stringclasses 9
values | meta.study.id stringclasses 33
values | meta.cell.subset stringclasses 31
values | meta.subject.cohort stringclasses 18
values | meta.subject.id stringclasses 267
values | meta.replica.id stringclasses 25
values | meta.clone.id stringlengths 1 23 ⌀ | meta.epitope.id stringclasses 26
values | meta.tissue stringclasses 12
values | meta.donor.MHC stringclasses 57
values | meta.donor.MHC.method stringclasses 3
values | meta.structure.id stringclasses 269
values | cdr3fix.alpha stringlengths 234 273 | cdr3fix.beta stringlengths 237 275 | vdjdb.score int64 0 3 | tcr_pmhc_hash stringlengths 64 64 | num_contacts float64 0 66 | ranking_confidence float64 0.27 0.94 ⌀ | plddt float64 75.2 98 ⌀ | ptm float64 0.49 0.95 ⌀ | iptm float64 0.2 0.94 ⌀ | tcr_pmhc_iptm float64 0.15 0.94 ⌀ | scanning_angle float64 2.8 173 ⌀ | pitch_angle float64 0 70 ⌀ | is_native bool 2
classes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1,159 | CAMREGGSNYQLIW | TRAV14/DV4*01 | TRAJ33*01 | CASSMIPDMNTEAFF | TRBV19*01 | null | TRBJ1-1*01 | HomoSapiens | HLA-B*08:01 | B2M | MHCI | RPIIRPATL | NP | InfluenzaB | PMID:38684663 | tetramer.sort | 2/23 | yes | sanger | null | B7-B8+ | CD8+ | Healthy | A14 | null | null | NP(30-38) | PBMC | HLA-A*01:01, HLA-A*23:01, HLA-B*08:01, HLA-B*15:01 | null | Fig 9, Supp Fig 5, Supp Table 5-8 | {'cdr3': 'CAMREGGSNYQLIW', 'cdr3_old': 'CAMREGGSNYQLIW', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ33*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV14/DV4*01'} | {'cdr3': 'CASSMIPDMNTEAFF', 'cdr3_old': 'CASSMIPDMNTEAFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-1*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | e65469dacd705ce72895eba2a2429496b764a2b1757f9f31f1d4c69ba7b14319 | 17 | 0.856085 | 94.351669 | 0.881483 | 0.849735 | 0.813714 | 130.885696 | 1.3345 | false |
1,162 | CAMREGGGGSNYKLTF | TRAV14/DV4*01 | TRAJ53*01 | CASSIIPDMNTEAFF | TRBV19*01 | null | TRBJ1-1*01 | HomoSapiens | HLA-B*08:01 | B2M | MHCI | RPIIRPATL | NP | InfluenzaB | PMID:38684663 | tetramer.sort | 1/23 | yes | sanger | null | B7-B8+ | CD8+ | Healthy | A14 | null | null | NP(30-38) | PBMC | HLA-A*01:01, HLA-A*23:01, HLA-B*08:01, HLA-B*15:01 | null | Fig 9, Supp Fig 5, Supp Table 5-8 | {'cdr3': 'CAMREGGGGSNYKLTF', 'cdr3_old': 'CAMREGGGGSNYKLTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ53*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV14/DV4*01'} | {'cdr3': 'CASSIIPDMNTEAFF', 'cdr3_old': 'CASSIIPDMNTEAFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-1*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | 93964a9d39918fff3b481e2e2c49e521ae6481bb1131fc8edb9d38e8dce5c3d8 | 12 | 0.877838 | 95.196538 | 0.896832 | 0.87309 | 0.849299 | 48.008499 | 12.1308 | false |
1,220 | CAMRGGSGGSNYKLTF | TRAV14/DV4*01 | TRAJ53*01 | CASSIIPDMNTEAFF | TRBV19*01 | null | TRBJ1-1*01 | HomoSapiens | HLA-B*08:01 | B2M | MHCI | RPIIRPATL | NP | InfluenzaB | PMID:38684663 | tetramer.sort | 1/25 | yes | sanger | null | B7-B8+ | CD8+ | Healthy | A11 | null | null | NP(30-38) | PBMC | HLA-A*01:01, HLA-A*30:02, HLA-B*08:01, HLA-B*51:01 | null | Fig 9, Supp Fig 5, Supp Table 5-8 | {'cdr3': 'CAMRGGSGGSNYKLTF', 'cdr3_old': 'CAMRGGSGGSNYKLTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ53*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV14/DV4*01'} | {'cdr3': 'CASSIIPDMNTEAFF', 'cdr3_old': 'CASSIIPDMNTEAFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-1*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | adb892c1da0bd50b6539fb0e50c763748fa957f9d426db4efcb3e9f978c3f926 | 9 | 0.82278 | 94.172827 | 0.855313 | 0.814647 | 0.765965 | 48.6381 | 12.6821 | false |
1,237 | CAMRESASGGSYIPTF | TRAV14/DV4*01 | TRAJ6*01 | CASSIIPDMNTEAFF | TRBV19*01 | null | TRBJ1-1*01 | HomoSapiens | HLA-B*08:01 | B2M | MHCI | RPIIRPATL | NP | InfluenzaB | PMID:38684663 | tetramer.sort | 1/25 | yes | sanger | null | B7-B8+ | CD8+ | Healthy | A11 | null | null | NP(30-38) | PBMC | HLA-A*01:01, HLA-A*30:02, HLA-B*08:01, HLA-B*51:01 | null | Fig 9, Supp Fig 5, Supp Table 5-8 | {'cdr3': 'CAMRESASGGSYIPTF', 'cdr3_old': 'CAMRESASGGSYIPTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ6*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV14/DV4*01'} | {'cdr3': 'CASSIIPDMNTEAFF', 'cdr3_old': 'CASSIIPDMNTEAFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-1*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | 4aa699d22372356b717176ff38e6ac95e12d77a52e3c18c7e0dc81a3eb14cfc9 | 12 | 0.827338 | 94.235785 | 0.857574 | 0.819779 | 0.768163 | 45.595501 | 10.7304 | false |
1,243 | CAMREDSGGSNYKLTF | TRAV14/DV4*01 | TRAJ53*01 | CASSMIPDMNTEAFF | TRBV19*01 | null | TRBJ1-1*01 | HomoSapiens | HLA-B*08:01 | B2M | MHCI | RPIIRPATL | NP | InfluenzaB | PMID:38684663 | tetramer.sort | 1/25 | yes | sanger | null | B7-B8+ | CD8+ | Healthy | A11 | null | null | NP(30-38) | PBMC | HLA-A*01:01, HLA-A*30:02, HLA-B*08:01, HLA-B*51:01 | null | Fig 9, Supp Fig 5, Supp Table 5-8 | {'cdr3': 'CAMREDSGGSNYKLTF', 'cdr3_old': 'CAMREDSGGSNYKLTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ53*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV14/DV4*01'} | {'cdr3': 'CASSMIPDMNTEAFF', 'cdr3_old': 'CASSMIPDMNTEAFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-1*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | fe71db0074bc2e858c5a304d6b508745d089fda0e00c2affa968d019f44bd19b | 16 | 0.862576 | 94.504539 | 0.88596 | 0.85673 | 0.820858 | 132.225403 | 3.6196 | false |
1,247 | CAMRDSGGSNYKLTF | TRAV14/DV4*01 | TRAJ53*01 | CASSNVPDMNTEAFF | TRBV19*01 | null | TRBJ1-1*01 | HomoSapiens | HLA-B*08:01 | B2M | MHCI | RPIIRPATL | NP | InfluenzaB | PMID:38684663 | tetramer.sort | 1/25 | yes | sanger | null | B7-B8+ | CD8+ | Healthy | A11 | null | null | NP(30-38) | PBMC | HLA-A*01:01, HLA-A*30:02, HLA-B*08:01, HLA-B*51:01 | null | Fig 9, Supp Fig 5, Supp Table 5-8 | {'cdr3': 'CAMRDSGGSNYKLTF', 'cdr3_old': 'CAMRDSGGSNYKLTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ53*01', 'jStart': 5, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV14/DV4*01'} | {'cdr3': 'CASSNVPDMNTEAFF', 'cdr3_old': 'CASSNVPDMNTEAFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-1*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | 21024915a958ca2b7d07ffb37045193ddfed812950d3b94ebab38f1f74c8da91 | 20 | 0.76055 | 92.963941 | 0.806736 | 0.749003 | 0.65769 | 47.522202 | 6.4442 | false |
1,262 | CAMREGDTSNSGAGSYQLTF | TRAV14/DV4*01 | TRAJ28*01 | CASSMVPDMNTEAFF | TRBV19*01 | null | TRBJ1-1*01 | HomoSapiens | HLA-B*08:01 | B2M | MHCI | RPIIRPATL | NP | InfluenzaB | PMID:38684663 | tetramer.sort | 1/21 | yes | sanger | null | B7-B8+ | CD8+ | Healthy | A9 | null | null | NP(30-38) | PBMC | HLA-A*26:01, HLA-A*32:01, HLA-B*08:01, HLA-B*35:03 | null | Fig 9, Supp Fig 5, Supp Table 5-8 | {'cdr3': 'CAMREGDTSNSGAGSYQLTF', 'cdr3_old': 'CAMREGDTSNSGAGSYQLTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ28*01', 'jStart': 10, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV14/DV4*01'} | {'cdr3': 'CASSMVPDMNTEAFF', 'cdr3_old': 'CASSMVPDMNTEAFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-1*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | 935b5f3980ee12e2989dcc9fd2ef2d7e229e046fec302e09e41a171279622d80 | 19 | 0.890557 | 94.38314 | 0.90808 | 0.886176 | 0.871497 | 131.9832 | 3.5867 | false |
1,266 | CAMRGGGSNYKLTF | TRAV14/DV4*01 | TRAJ53*01 | CASSMIPDMNTEAFF | TRBV19*01 | null | TRBJ1-1*01 | HomoSapiens | HLA-B*08:01 | B2M | MHCI | RPIIRPATL | NP | InfluenzaB | PMID:38684663 | tetramer.sort | 1/21 | yes | sanger | null | B7-B8+ | CD8+ | Healthy | A9 | null | null | NP(30-38) | PBMC | HLA-A*26:01, HLA-A*32:01, HLA-B*08:01, HLA-B*35:03 | null | Fig 9, Supp Fig 5, Supp Table 5-8 | {'cdr3': 'CAMRGGGSNYKLTF', 'cdr3_old': 'CAMRGGGSNYKLTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ53*01', 'jStart': 5, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV14/DV4*01'} | {'cdr3': 'CASSMIPDMNTEAFF', 'cdr3_old': 'CASSMIPDMNTEAFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-1*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | d1144b70c8b24cd180db8aeff2727d13ea3f260a43bda99d5159aede8278ca36 | 14 | 0.862207 | 95.096249 | 0.88562 | 0.856354 | 0.819519 | 129.165405 | 1.3305 | false |
3,467 | CAVRDGTANNLFF | TRAV3*01 | TRAJ36*01 | CASSISSTGELFF | TRBV19*01 | null | TRBJ2-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 5/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAVRDGTANNLFF', 'cdr3_old': 'CAVRDGTANNLFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ36*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV3*01'} | {'cdr3': 'CASSISSTGELFF', 'cdr3_old': 'CASSISSTGELFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-2*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 1 | b50caece97fa5d7ac64724af76ca559c56f464971508436722617ef59b18b655 | 19 | 0.831688 | 94.129617 | 0.85891 | 0.824883 | 0.781363 | null | null | false |
3,468 | CAFMKDAGGTSYGKLTF | TRAV38-1*01 | TRAJ52*01 | CASSIGVYGYTF | TRBV19*01 | null | TRBJ1-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 4/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAFMKDAGGTSYGKLTF', 'cdr3_old': 'CAFMKDAGGTSYGKLTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ52*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV38-1*01'} | {'cdr3': 'CASSIGVYGYTF', 'cdr3_old': 'CASSIGVYGYTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-2*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | 097ed7e33d0045419e9678e976751c17831b7af52b3426e6b582f36ccfa414b8 | 19 | 0.880924 | 94.182093 | 0.898989 | 0.876408 | 0.866843 | 52.552601 | 9.3839 | false |
3,469 | CAGGGSQGNLIF | TRAV27*01 | TRAJ42*01 | CASSIRSSYEQYF | TRBV19*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 2/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAGGGSQGNLIF', 'cdr3_old': 'CAGGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 3, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV27*01'} | {'cdr3': 'CASSIRSSYEQYF', 'cdr3_old': 'CASSIRSSYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | 3fab22528c71e3b1dbae4f7f54d52d14f098b80eae5dac06ea81d754d9793b88 | 20 | 0.924493 | 96.941061 | 0.93426 | 0.922052 | 0.918857 | 56.335098 | 2.613 | false |
3,470 | CALAGSQGNLIF | TRAV23/DV6*01 | TRAJ42*01 | CASSIRASYEQYF | TRBV19*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 4/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CALAGSQGNLIF', 'cdr3_old': 'CALAGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 4, 'vCanonical': True, 'vEnd': 2, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV23/DV6*01'} | {'cdr3': 'CASSIRASYEQYF', 'cdr3_old': 'CASSIRASYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | 3c538d5f192d4ff8d82a2fa1c2fe9a64fc7f975598fb1d09290cad8d4f25d35c | 18 | 0.927055 | 96.59766 | 0.936517 | 0.924689 | 0.926375 | 55.020901 | 4.4207 | false |
3,471 | CAGADGGSQGNLIF | TRAV27*01 | TRAJ42*01 | CASSGRAAGELFF | TRBV19*01 | null | TRBJ2-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 2/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAGADGGSQGNLIF', 'cdr3_old': 'CAGADGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 5, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV27*01'} | {'cdr3': 'CASSGRAAGELFF', 'cdr3_old': 'CASSGRAAGELFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-2*01', 'jStart': 8, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 1 | af3b3da74952a941f6e9d7a9af81c9f4f2b7992e470fa29775100892b58f466a | 19 | 0.908462 | 95.578328 | 0.921636 | 0.905169 | 0.900088 | 58.411598 | 2.3215 | false |
3,472 | CAAGGSQGNLIF | TRAV27*01 | TRAJ42*01 | CASSVRSSYEQYF | TRBV19*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 2/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAAGGSQGNLIF', 'cdr3_old': 'CAAGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 3, 'vCanonical': True, 'vEnd': 2, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV27*01'} | {'cdr3': 'CASSVRSSYEQYF', 'cdr3_old': 'CASSVRSSYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 1 | 1af9ac5b317dfd8dfad46e4845c567fd45ddddefb01dff4c2a7837eaf9328919 | 17 | 0.931764 | 97.103029 | 0.940155 | 0.929666 | 0.9305 | 58.138699 | 3.1954 | false |
3,473 | CAAPPSNTGKLIF | TRAV3*01 | TRAJ37*01 | CASSTRAADTQYF | TRBV19*01 | null | TRBJ2-3*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAAPPSNTGKLIF', 'cdr3_old': 'CAAPPSNTGKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ37*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 2, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV3*01'} | {'cdr3': 'CASSTRAADTQYF', 'cdr3_old': 'CASSTRAADTQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-3*01', 'jStart': 8, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | 3345e29b164588400da544e28d26954d51078a87e5d0ab78f61d8d904617a4af | 22 | 0.925264 | 96.683615 | 0.935432 | 0.922722 | 0.918587 | null | null | false |
3,475 | CAENMGGGSQGNLIF | TRAV13-2*01 | TRAJ42*01 | CASSIRAGETQYF | TRBV19*01 | null | TRBJ2-5*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAENMGGGSQGNLIF', 'cdr3_old': 'CAENMGGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV13-2*01'} | {'cdr3': 'CASSIRAGETQYF', 'cdr3_old': 'CASSIRAGETQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-5*01', 'jStart': 8, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 0 | eb104fcefcfa53d864b697d2d82ef029410aae0efe5551e2f3e8940b89e3f4e0 | 21 | 0.893099 | 94.2713 | 0.909244 | 0.889062 | 0.892198 | 57.174099 | 8.4596 | false |
3,476 | CAMRDGGGSQGNLIF | TRAV14/DV4*01 | TRAJ42*01 | CASSIRSGAEQYF | TRBV19*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAMRDGGGSQGNLIF', 'cdr3_old': 'CAMRDGGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV14/DV4*01'} | {'cdr3': 'CASSIRSGAEQYF', 'cdr3_old': 'CASSIRSGAEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 0 | 73b39bdfb7877c675f88e6386d01e354e047f89f85728fcd9d0ae20bc136c9b7 | 18 | 0.910493 | 95.67104 | 0.923308 | 0.907289 | 0.909384 | null | null | false |
3,477 | CAVAPTGNVLHC | TRAV20*01 | TRAJ35 | CASSIRSTGELFF | TRBV19*01 | null | TRBJ2-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAVAPTGNVLHC', 'cdr3_old': 'CAVAPTGNVLHC', 'fixNeeded': False, 'good': False, 'jCanonical': False, 'jFixType': 'FailedBadSegment', 'jId': 'TRAJ35', 'jStart': -1, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV20*01'} | {'cdr3': 'CASSIRSTGELFF', 'cdr3_old': 'CASSIRSTGELFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-2*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 1 | 1341781f6f4c121fb6ce9f2a1a272e43a9692153eb950cee6b9d9491acebca7b | 16 | 0.88028 | 94.503719 | 0.89891 | 0.875623 | 0.884938 | null | null | false |
3,478 | CAGAGSQGNLIF | TRAV27*01 | TRAJ42*01 | CASSVRSSYEQYF | TRBV19*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAGAGSQGNLIF', 'cdr3_old': 'CAGAGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 4, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV27*01'} | {'cdr3': 'CASSVRSSYEQYF', 'cdr3_old': 'CASSVRSSYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | 100143e7ac8c61b0c60e1dda6e33afdc72df2fa373d215d04d3ee57fe8bbe74d | 18 | 0.935972 | 97.319876 | 0.943634 | 0.934057 | 0.935329 | 58.699402 | 3.5808 | false |
3,479 | CAGGLGGGSQGNLIF | TRAV27*01 | TRAJ42*01 | CASSIRAAYEQYF | TRBV19*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAGGLGGGSQGNLIF', 'cdr3_old': 'CAGGLGGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV27*01'} | {'cdr3': 'CASSIRAAYEQYF', 'cdr3_old': 'CASSIRAAYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 8, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 0 | 5bd8d6ac679d10842f38f1201549bb19039d4f7ee403e8344051457da5d29f2f | 18 | 0.933617 | 96.994661 | 0.941566 | 0.93163 | 0.933042 | 60.1367 | 4.5197 | false |
3,480 | CAGADGGSQGNLIF | TRAV27*01 | TRAJ42*01 | CASSISSTGELFF | TRBV19*01 | null | TRBJ2-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAGADGGSQGNLIF', 'cdr3_old': 'CAGADGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 5, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV27*01'} | {'cdr3': 'CASSISSTGELFF', 'cdr3_old': 'CASSISSTGELFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-2*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 0 | 7ca851b04fdde92f72cbd861b33ad72eef0733c4cb257ff6d350e21d183ad2c5 | 19 | 0.900582 | 95.016794 | 0.915803 | 0.896777 | 0.891607 | 59.319801 | 2.7899 | false |
3,481 | CAGGGSSNTGKLIF | TRAV27*01 | TRAJ37*01 | CASSIRSSYEQYF | TRBV19*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAGGGSSNTGKLIF', 'cdr3_old': 'CAGGGSSNTGKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ37*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV27*01'} | {'cdr3': 'CASSIRSSYEQYF', 'cdr3_old': 'CASSIRSSYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | 7fe34751b3e5da1dc590d9586d987b6d8f0aee8a162955eb5a64b8cdfa8ad504 | 21 | 0.932302 | 96.793205 | 0.940478 | 0.930258 | 0.932621 | 59.6465 | 4.4067 | false |
3,482 | CPGGSQGNLIF | TRAV29/DV5*01 | TRAJ42*01 | CASSIGVYGYTF | TRBV19*01 | null | TRBJ1-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CPGGSQGNLIF', 'cdr3_old': 'CPGGSQGNLIF', 'fixNeeded': False, 'good': False, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 2, 'vCanonical': True, 'vEnd': -1, 'vFixType': 'FailedNoAlignment', 'vId': 'TRAV29/DV5*01'} | {'cdr3': 'CASSIGVYGYTF', 'cdr3_old': 'CASSIGVYGYTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-2*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 0 | 9fe783930e24a4b8ff8fc736f3a53e461b880a93bc57923e28d155c20c0d2382 | 22 | 0.884359 | 95.309659 | 0.906638 | 0.878789 | 0.865748 | 50.242298 | 0.4755 | false |
3,483 | CGTGGSQGNLIF | TRAV30*01 | TRAJ42*01 | CASSVRSADTQYF | TRBV19*01 | null | TRBJ2-3*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CGTGGSQGNLIF', 'cdr3_old': 'CGTGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 3, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV30*01'} | {'cdr3': 'CASSVRSADTQYF', 'cdr3_old': 'CSSVRSADTQYF', 'fixNeeded': True, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-3*01', 'jStart': 8, 'vCanonical': True, 'vEnd': 2, 'vFixType': 'FixReplace', 'vId': 'TRBV19*01'} | 0 | 50c5e155a637f89f87fb58086e0b283ebf7e88b1bb234355f81a745d6c7c1e2c | 19 | 0.892023 | 94.896318 | 0.907684 | 0.888108 | 0.883138 | 53.850498 | 2.0295 | false |
3,484 | CAFMINAGGTSYGKLTF | TRAV38-1*01 | TRAJ52*01 | CASSIGSYGYTF | TRBV19*01 | null | TRBJ1-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAFMINAGGTSYGKLTF', 'cdr3_old': 'CAFMINAGGTSYGKLTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ52*01', 'jStart': 5, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV38-1*01'} | {'cdr3': 'CASSIGSYGYTF', 'cdr3_old': 'CASSIGSYGYTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-2*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | bace9ee086b08b4d8d8a81470e78b2a1549fc469a108ee2ce85d288d430cde52 | 20 | 0.877975 | 94.329343 | 0.896599 | 0.873319 | 0.860318 | 51.051102 | 9.2044 | false |
3,486 | CAGPTHDMNYGGSQGNLIF | TRAV35*01 | TRAJ42*01 | CASSIHSTDTQYF | TRBV19*01 | null | TRBJ2-3*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 3/27 | yes | sanger | null | null | CD8+ | healthy | H2 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:03,HLA-B*44:02 | null | null | {'cdr3': 'CAGPTHDMNYGGSQGNLIF', 'cdr3_old': 'CAGPTHDMNYGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 8, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV35*01'} | {'cdr3': 'CASSIHSTDTQYF', 'cdr3_old': 'CASSIHSTDTQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-3*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 1 | 8c5c581f895a577e701196e9cd17391fb7f24a76415ed4c39f4eada0b34497eb | 24 | 0.915322 | 94.962913 | 0.926137 | 0.912619 | 0.916344 | 55.8713 | 4.9027 | false |
3,489 | CAGGGSSNTGKLIF | TRAV27*01 | TRAJ37*01 | CASSIRSAYEQYF | TRBV19*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 2/27 | yes | sanger | null | null | CD8+ | healthy | H2 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:03,HLA-B*44:02 | null | null | {'cdr3': 'CAGGGSSNTGKLIF', 'cdr3_old': 'CAGGGSSNTGKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ37*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV27*01'} | {'cdr3': 'CASSIRSAYEQYF', 'cdr3_old': 'CASSIRSAYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 8, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | 7bf9928d257f7aa85cb53a742861fc5e9ab5fdc9d9e9b47df06453f02ae935f6 | 21 | 0.932518 | 97.038382 | 0.940692 | 0.930474 | 0.931643 | 60.270699 | 4.3578 | false |
3,491 | CAVGGSQGNLIF | TRAV8-6*01 | TRAJ42*01 | CASSIRSSYEQYF | TRBV19*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/27 | yes | sanger | null | null | CD8+ | healthy | H2 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:03,HLA-B*44:02 | null | null | {'cdr3': 'CAVGGSQGNLIF', 'cdr3_old': 'CAVGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 3, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV8-6*01'} | {'cdr3': 'CASSIRSSYEQYF', 'cdr3_old': 'CASSIRSSYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | a273f6c934f7d831fde255aae0e7ebd4c050b8c67c77917ef4fdb8033d172abe | 20 | 0.926615 | 96.626514 | 0.936061 | 0.924254 | 0.923022 | 51.691002 | 1.3591 | false |
3,492 | CAGAQGSSNTGKLIF | TRAV27*01 | TRAJ37*01 | CASSIRSAYEQFF | TRBV19*01 | null | TRBJ2-1*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/27 | yes | sanger | null | null | CD8+ | healthy | H2 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:03,HLA-B*44:02 | null | null | {'cdr3': 'CAGAQGSSNTGKLIF', 'cdr3_old': 'CAGAQGSSNTGKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ37*01', 'jStart': 8, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV27*01'} | {'cdr3': 'CASSIRSAYEQFF', 'cdr3_old': 'CASSIRSAYEQFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-1*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 0 | e6768d2f36d0a4e5889a0b1f2d17dcb3329d468ec5b84b79573cf793a0136be7 | 21 | 0.935261 | 97.023635 | 0.942949 | 0.933339 | 0.935493 | null | null | false |
3,493 | CAGAVGSSNTGKLIF | TRAV27*01 | TRAJ37*01 | CASSIRSSYEQYF | TRBV19*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/27 | yes | sanger | null | null | CD8+ | healthy | H2 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:03,HLA-B*44:02 | null | null | {'cdr3': 'CAGAVGSSNTGKLIF', 'cdr3_old': 'CAGAVGSSNTGKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ37*01', 'jStart': 8, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV27*01'} | {'cdr3': 'CASSIRSSYEQYF', 'cdr3_old': 'CASSIRSSYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | a93d76399dafe87a02bd16e42ae227620016357ccc1dcb7fe056e7ed8a807062 | 21 | 0.93001 | 96.615286 | 0.939031 | 0.927755 | 0.929032 | null | null | false |
3,494 | CAGASSSSNTGKLIF | TRAV27*01 | TRAJ37*01 | CASSIRSAYEQYF | TRBV19*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/27 | yes | sanger | null | null | CD8+ | healthy | H2 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:03,HLA-B*44:02 | null | null | {'cdr3': 'CAGASSSSNTGKLIF', 'cdr3_old': 'CAGASSSSNTGKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ37*01', 'jStart': 8, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV27*01'} | {'cdr3': 'CASSIRSAYEQYF', 'cdr3_old': 'CASSIRSAYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 8, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | b25864ed368f3e36c268f62f7c05e81d0d260145f8e04483afac94569e6d88e9 | 22 | 0.936282 | 97.107637 | 0.943698 | 0.934428 | 0.93576 | null | null | false |
3,495 | CAAGGSQGNLIF | TRAV27*01 | TRAJ42*01 | CASSIRSSYEQYF | TRBV19*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/27 | yes | sanger | null | null | CD8+ | healthy | H2 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:03,HLA-B*44:02 | null | null | {'cdr3': 'CAAGGSQGNLIF', 'cdr3_old': 'CAAGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 3, 'vCanonical': True, 'vEnd': 2, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV27*01'} | {'cdr3': 'CASSIRSSYEQYF', 'cdr3_old': 'CASSIRSSYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | 4d33a5b6a709937abfaabe5e5e2ec4683123ede017f6666bb7a403dd8d862051 | 19 | 0.930605 | 96.954888 | 0.939264 | 0.928441 | 0.929423 | 57.629101 | 3.3256 | false |
3,496 | CGTEEGGGSQGNLIF | TRAV30*01 | TRAJ42*01 | CASSSRSTDTQYF | TRBV19*01 | null | TRBJ2-3*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/27 | yes | sanger | null | null | CD8+ | healthy | H2 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:03,HLA-B*44:02 | null | null | {'cdr3': 'CGTEEGGGSQGNLIF', 'cdr3_old': 'CGTEEGGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV30*01'} | {'cdr3': 'CASSSRSTDTQYF', 'cdr3_old': 'CASSSRSTDTQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-3*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 0 | 6ac853c999da7e531cbbe8f27c2e310a40d6da1192f9dbbf7088f995cddf50c5 | 20 | 0.910388 | 94.888331 | 0.922091 | 0.907462 | 0.909676 | 54.523102 | 4.1983 | false |
3,498 | CAFMKDAGGTSYGKLTF | TRAV38-1*01 | TRAJ52*01 | CASSIGVYGYTF | TRBV19*01 | null | TRBJ1-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/27 | yes | sanger | null | null | CD8+ | healthy | H2 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:03,HLA-B*44:02 | null | null | {'cdr3': 'CAFMKDAGGTSYGKLTF', 'cdr3_old': 'CAFMKDAGGTSYGKLTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ52*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV38-1*01'} | {'cdr3': 'CASSIGVYGYTF', 'cdr3_old': 'CASSIGVYGYTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-2*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | 097ed7e33d0045419e9678e976751c17831b7af52b3426e6b582f36ccfa414b8 | 19 | 0.880924 | 94.182093 | 0.898989 | 0.876408 | 0.866843 | 52.552601 | 9.3839 | false |
3,499 | CAGGGSQGNLIF | TRAV27*01 | TRAJ42*01 | CASSIRSSYEQYF | TRBV19*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 7/27 | yes | sanger | null | null | CD8+ | healthy | H2 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:03,HLA-B*44:02 | null | null | {'cdr3': 'CAGGGSQGNLIF', 'cdr3_old': 'CAGGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 3, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV27*01'} | {'cdr3': 'CASSIRSSYEQYF', 'cdr3_old': 'ASSIRSSYEQYF', 'fixNeeded': True, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'FixAdd', 'vId': 'TRBV19*01'} | 3 | 3fab22528c71e3b1dbae4f7f54d52d14f098b80eae5dac06ea81d754d9793b88 | 20 | 0.924493 | 96.941061 | 0.93426 | 0.922052 | 0.918857 | 56.335098 | 2.613 | false |
3,500 | CAVRDGTANNLFF | TRAV3*01 | TRAJ36*01 | CASSISSTGELFF | TRBV19*01 | null | TRBJ2-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/27 | yes | sanger | null | null | CD8+ | healthy | H3 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*03:02,HLA-B*18:01,HLA-B*35:08 | null | null | {'cdr3': 'CAVRDGTANNLFF', 'cdr3_old': 'CAVRDGTANNLFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ36*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV3*01'} | {'cdr3': 'CASSISSTGELFF', 'cdr3_old': 'CASSISSTGELFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-2*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 1 | b50caece97fa5d7ac64724af76ca559c56f464971508436722617ef59b18b655 | 19 | 0.831688 | 94.129617 | 0.85891 | 0.824883 | 0.781363 | null | null | false |
3,501 | CAGAEGGSQGNLIF | TRAV27*01 | TRAJ42*01 | CASSIRSTGELFF | TRBV19*01 | null | TRBJ2-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 14/27 | yes | sanger | null | null | CD8+ | healthy | H3 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*03:02,HLA-B*18:01,HLA-B*35:08 | null | null | {'cdr3': 'CAGAEGGSQGNLIF', 'cdr3_old': 'CAGAEGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 5, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV27*01'} | {'cdr3': 'CASSIRSTGELFF', 'cdr3_old': 'CASSIRSTGELFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-2*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | b91af4a85dbeeae0a122c8e3c2d5aee96f45ea05bc24a204f29aebb9bb4f88c5 | 18 | 0.913208 | 95.745821 | 0.927075 | 0.909742 | 0.909506 | 58.575199 | 3.1544 | false |
3,502 | CAGAEGGSQGNLIF | TRAV27*01 | TRAJ42*01 | CASSGRSTGELFF | TRBV19*01 | null | TRBJ2-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 2/27 | yes | sanger | null | null | CD8+ | healthy | H3 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*03:02,HLA-B*18:01,HLA-B*35:08 | null | null | {'cdr3': 'CAGAEGGSQGNLIF', 'cdr3_old': 'CAGAEGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 5, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV27*01'} | {'cdr3': 'CASSGRSTGELFF', 'cdr3_old': 'CASSGRSTGELFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-2*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | 7723f3f872b3f28002f44f7e82faeb47e4158b2afb94ad0e2efc26147adeb855 | 24 | 0.767377 | 92.101586 | 0.808512 | 0.757094 | 0.679754 | 59.290901 | 2.6896 | false |
3,503 | CAGGGSQGNLIF | TRAV27*01 | TRAJ42*01 | CASSTRSSYEQYF | TRBV19*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 2/27 | yes | sanger | null | null | CD8+ | healthy | H3 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*03:02,HLA-B*18:01,HLA-B*35:08 | null | null | {'cdr3': 'CAGGGSQGNLIF', 'cdr3_old': 'CAGGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 3, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV27*01'} | {'cdr3': 'CASSTRSSYEQYF', 'cdr3_old': 'CASSTRSSYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | d0768aa389744b384058c060f2f6a8cc9d1d2f4163c0b660e3804d1d2da99164 | 20 | 0.92706 | 97.237038 | 0.936534 | 0.924691 | 0.921839 | 58.677799 | 3.3412 | false |
3,505 | CAENRGGGSQGNLIF | TRAV13-2*01 | TRAJ42*01 | CASSQRASYEQYF | TRBV19*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/27 | yes | sanger | null | null | CD8+ | healthy | H3 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*03:02,HLA-B*18:01,HLA-B*35:08 | null | null | {'cdr3': 'CAENRGGGSQGNLIF', 'cdr3_old': 'CAENRGGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV13-2*01'} | {'cdr3': 'CASSQRASYEQYF', 'cdr3_old': 'CASSQRASYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | fbb41ef4a4d70ad07716b4e90f643fc1c93ea87f275e4cc8744dfb81bbae04f4 | 20 | 0.916409 | 95.122625 | 0.928155 | 0.913473 | 0.9249 | 55.7542 | 7.5833 | false |
3,506 | CALIITSGTYKYIF | TRAV19*01 | TRAJ40*01 | CASSVGQPQHF | TRBV19*01 | null | TRBJ1-5*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/27 | yes | sanger | null | null | CD8+ | healthy | H3 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*03:02,HLA-B*18:01,HLA-B*35:08 | null | null | {'cdr3': 'CALIITSGTYKYIF', 'cdr3_old': 'CALIITSGTYKYIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ40*01', 'jStart': 5, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV19*01'} | {'cdr3': 'CASSVGQPQHF', 'cdr3_old': 'CASSVGQPQHF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-5*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 0 | 758beed1aba76dbd69479ae575fbd4ef5ff974cf1f9767d5d2fd40672c30e1f8 | 18 | 0.877254 | 94.376434 | 0.896243 | 0.872507 | 0.862705 | 52.239201 | 6.8467 | false |
3,508 | CAGSYGGSQGNLIF | TRAV35*01 | TRAJ42*01 | CASSVRSSGEQFF | TRBV19*01 | null | TRBJ2-1*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/27 | yes | sanger | null | null | CD8+ | healthy | H3 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*03:02,HLA-B*18:01,HLA-B*35:08 | null | null | {'cdr3': 'CAGSYGGSQGNLIF', 'cdr3_old': 'CAGSYGGSQGNLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ42*01', 'jStart': 4, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV35*01'} | {'cdr3': 'CASSVRSSGEQFF', 'cdr3_old': 'CASSVRSSGEQFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-1*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 0 | 0b503b58a7567ceeed312bbd3284ea683bfaa3a9134384474424167c62927d1c | 20 | 0.934101 | 96.871321 | 0.941638 | 0.932217 | 0.933156 | 52.687401 | 4.4328 | false |
3,509 | CAGPDGSSNTGKLIF | TRAV35*01 | TRAJ37*01 | CASSLIFPGRAFF | TRBV27*01 | null | TRBJ1-1*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/27 | yes | sanger | null | null | CD8+ | healthy | H3 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*03:02,HLA-B*18:01,HLA-B*35:08 | null | null | {'cdr3': 'CAGPDGSSNTGKLIF', 'cdr3_old': 'CAGPDGSSNTGKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ37*01', 'jStart': 8, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV35*01'} | {'cdr3': 'CASSLIFPGRAFF', 'cdr3_old': 'CASSLIFPGRAFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-1*01', 'jStart': 10, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV27*01'} | 0 | 8676fcdbea24492db07eb1e0b73a923cb490a7ffeae47aa32d3cf72a5c05fdd1 | 22 | 0.811105 | 93.684435 | 0.847085 | 0.80211 | 0.743448 | 51.8549 | 2.4384 | false |
3,510 | CAFMVNAGGTSYGKLTF | TRAV38-1*01 | TRAJ52*01 | CASSIGSYGYTF | TRBV19*01 | null | TRBJ1-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/27 | yes | sanger | null | null | CD8+ | healthy | H3 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*03:02,HLA-B*18:01,HLA-B*35:08 | null | null | {'cdr3': 'CAFMVNAGGTSYGKLTF', 'cdr3_old': 'CAFMVNAGGTSYGKLTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ52*01', 'jStart': 5, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV38-1*01'} | {'cdr3': 'CASSIGSYGYTF', 'cdr3_old': 'CASSIGSYGYTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-2*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 3 | 936577cc40fa11349a5d8a6df30a44c123312d921cd30dd62a5e68eae3b6d97d | 20 | 0.876208 | 94.610881 | 0.895126 | 0.871478 | 0.857723 | 50.090302 | 8.9776 | false |
3,511 | CAYSPASGGTSYGKLTF | TRAV38-1*01 | TRAJ52*01 | CASSIGLYGYTF | TRBV19*01 | null | TRBJ1-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GILGFVFTL | M | InfluenzaA | PMID:27645996 | tetramer-sort,beads | 1/27 | yes | sanger | null | null | CD8+ | healthy | H3 | null | null | M1 | PBMC | HLA-A*02:01,HLA-A*03:02,HLA-B*18:01,HLA-B*35:08 | null | null | {'cdr3': 'CAYSPASGGTSYGKLTF', 'cdr3_old': 'CAYSPASGGTSYGKLTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ52*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 2, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV38-1*01'} | {'cdr3': 'CASSIGLYGYTF', 'cdr3_old': 'CASSIGLYGYTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-2*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV19*01'} | 0 | c988791e011fe924c9ace35f30961c5d6152a934d10dea5385fdf51ffbe6df61 | 17 | 0.873258 | 94.21815 | 0.893069 | 0.868305 | 0.849968 | 51.887299 | 9.6292 | false |
3,512 | CAEDNNARLMF | TRAV5*01 | TRAJ31*01 | CSARVGVGNTIYF | TRBV20-1*01 | null | TRBJ1-3*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GLCTLVAML | BMLF1 | EBV | PMID:27645996 | tetramer-sort,beads | 24/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | BMLF-1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAEDNNARLMF', 'cdr3_old': 'CAEDNNARLMF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ31*01', 'jStart': 4, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV5*01'} | {'cdr3': 'CSARVGVGNTIYF', 'cdr3_old': 'CSARVGVGNTIYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-3*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV20-1*01'} | 1 | d0ff9f35e47e8e0d862d9cee9e87a0d30c094524931382f372c299a99c14dd29 | 25 | 0.883738 | 94.717645 | 0.901776 | 0.879228 | 0.870502 | 47.606499 | 4.0502 | false |
3,513 | CAEDFNARLMF | TRAV5*01 | TRAJ31*01 | CSARTGVGNTIYF | TRBV20-1*01 | null | TRBJ1-3*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GLCTLVAML | BMLF1 | EBV | PMID:27645996 | tetramer-sort,beads | 4/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | BMLF-1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAEDFNARLMF', 'cdr3_old': 'CAEDFNARLMF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ31*01', 'jStart': 5, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV5*01'} | {'cdr3': 'CSARTGVGNTIYF', 'cdr3_old': 'CSARTGVGNTIYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-3*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV20-1*01'} | 1 | 63faea752a428d332e49a0b598eaeb483fa7907c6dcb12e51bf8a1566062840b | 26 | 0.876906 | 93.988525 | 0.90114 | 0.870848 | 0.87749 | 44.222801 | 4.588 | false |
3,514 | CAEDNNARLMF | TRAV5*01 | TRAJ31*01 | CSARDRTGNGYTF | TRBV20-1*01 | null | TRBJ1-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GLCTLVAML | BMLF1 | EBV | PMID:27645996 | tetramer-sort,beads | 2/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | BMLF-1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAEDNNARLMF', 'cdr3_old': 'CAEDNNARLMF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ31*01', 'jStart': 4, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV5*01'} | {'cdr3': 'CSARDRTGNGYTF', 'cdr3_old': 'CSARDRTGNGYTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-2*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV20-1*01'} | 1 | af7c4c3124b46b9da48a8da523eed69622f27e5101d29b751fce5ca40e361bc6 | 19 | 0.891163 | 94.213002 | 0.914088 | 0.885432 | 0.891433 | 43.1791 | 4.7935 | false |
3,515 | CAEDNNARLMF | TRAV5*01 | TRAJ31*01 | CSARDGTGNGYTF | TRBV20-1*01 | null | TRBJ1-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GLCTLVAML | BMLF1 | EBV | PMID:27645996 | tetramer-sort,beads | 1/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | BMLF-1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAEDNNARLMF', 'cdr3_old': 'CAEDNNARLMF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ31*01', 'jStart': 4, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV5*01'} | {'cdr3': 'CSARDGTGNGYTF', 'cdr3_old': 'CSARDGTGNGYTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-2*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV20-1*01'} | 2 | 0db2fce6f58244194868dfff1af1a281da1bbf414f08e321c64b20e8fe7c6b87 | 23 | 0.889763 | 94.138414 | 0.910251 | 0.884641 | 0.892899 | 44.762501 | 5.2876 | false |
3,516 | CAEDKDARLMF | TRAV5*01 | TRAJ31*01 | CSARDRIGNTIYF | TRBV20-1*01 | null | TRBJ1-3*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GLCTLVAML | BMLF1 | EBV | PMID:27645996 | tetramer-sort,beads | 1/32 | yes | sanger | null | null | CD8+ | healthy | H1 | null | null | BMLF-1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:01,HLA-B*39:01 | null | null | {'cdr3': 'CAEDKDARLMF', 'cdr3_old': 'CAEDKDARLMF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ31*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV5*01'} | {'cdr3': 'CSARDRIGNTIYF', 'cdr3_old': 'CSARDRIGNTIYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-3*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV20-1*01'} | 0 | 390a17fe89b5f9637298805b2720d7dda05552a82f5232d1a140fbd535ac8acb | 19 | 0.885521 | 94.438904 | 0.911015 | 0.879148 | 0.888075 | 43.8876 | 3.6251 | false |
3,519 | CAEDSNARLMF | TRAV5*01 | TRAJ31*01 | CSARSGVGNTIYF | TRBV20-1*01 | null | TRBJ1-3*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GLCTLVAML | BMLF1 | EBV | PMID:27645996 | tetramer-sort,beads | 2/31 | yes | sanger | null | null | CD8+ | healthy | H2 | null | null | BMLF-1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:03,HLA-B*44:02 | null | null | {'cdr3': 'CAEDSNARLMF', 'cdr3_old': 'CAEDSNARLMF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ31*01', 'jStart': 5, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV5*01'} | {'cdr3': 'CSARSGVGNTIYF', 'cdr3_old': 'CSARSGVGNTIYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-3*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV20-1*01'} | 1 | 9ce807c41aa3e6d671f74ad68c185615458755b8b00f984bd5cbecbbbdd8eb23 | 26 | 0.879784 | 94.582322 | 0.903094 | 0.873957 | 0.867769 | 47.151699 | 4.4117 | false |
3,520 | CAEDQNARLMF | TRAV5*01 | TRAJ31*01 | CSARWGVGNTIYF | TRBV20-1*01 | null | TRBJ1-3*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GLCTLVAML | BMLF1 | EBV | PMID:27645996 | tetramer-sort,beads | 1/31 | yes | sanger | null | null | CD8+ | healthy | H2 | null | null | BMLF-1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:03,HLA-B*44:02 | null | null | {'cdr3': 'CAEDQNARLMF', 'cdr3_old': 'CAEDQNARLMF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ31*01', 'jStart': 5, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV5*01'} | {'cdr3': 'CSARWGVGNTIYF', 'cdr3_old': 'CSARWGVGNTIYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-3*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV20-1*01'} | 0 | 179169c8c364fe591fef3897c19d8b381f252f1b51e82e5766021f8c49436f5c | 20 | 0.880292 | 94.459254 | 0.907557 | 0.873475 | 0.878891 | 43.6222 | 4.1078 | false |
3,521 | CALDSTYSSASKIIF | TRAV6*01 | TRAJ31*01 | CSARDRTGNGYTF | TRBV20-1*01 | null | TRBJ1-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GLCTLVAML | BMLF1 | EBV | PMID:27645996 | tetramer-sort,beads | 1/31 | yes | sanger | null | null | CD8+ | healthy | H2 | null | null | BMLF-1 | PBMC | HLA-A*02:01,HLA-A*11:01,HLA-B*35:03,HLA-B*44:02 | null | null | {'cdr3': 'CALDSTYSSASKIIF', 'cdr3_old': 'CALDSTYSSASKIIF', 'fixNeeded': False, 'good': False, 'jCanonical': True, 'jFixType': 'FailedNoAlignment', 'jId': 'TRAJ31*01', 'jStart': -1, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV6*01'} | {'cdr3': 'CSARDRTGNGYTF', 'cdr3_old': 'CSARDRTGNGYTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-2*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV20-1*01'} | 0 | 7130c98f4a014468e0c198ec24c11417c03f108f3e9be8a30ac23b39dee34926 | 3 | 0.528566 | 85.821222 | 0.624243 | 0.504646 | 0.369897 | 109.267601 | 44.9004 | false |
3,525 | CAELGQKLLF | TRAV5*01 | TRAJ16 | CASSQSPGGTQYF | TRBV14*01 | null | TRBJ2-5*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GLCTLVAML | BMLF1 | EBV | PMID:27645996 | tetramer-sort,beads | 8/27 | yes | sanger | null | null | CD8+ | healthy | H3 | null | null | BMLF-1 | PBMC | HLA-A*02:01,HLA-A*03:02,HLA-B*18:01,HLA-B*35:08 | null | null | {'cdr3': 'CAELGQKLLF', 'cdr3_old': 'CAELGQKLLF', 'fixNeeded': False, 'good': False, 'jCanonical': True, 'jFixType': 'FailedBadSegment', 'jId': 'TRAJ16', 'jStart': -1, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV5*01'} | {'cdr3': 'CASSQSPGGTQYF', 'cdr3_old': 'CASSQSPGGTQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-5*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV14*01'} | 1 | 4823fc464fc0b301848454d5ab856f41ada78bedddab7af8da317a3c3d9cfd0b | 25 | 0.898303 | 95.725099 | 0.917088 | 0.893606 | 0.888768 | 36.654099 | 3.1818 | false |
3,526 | CAESTGKLIF | TRAV5*01 | TRAJ37*01 | CSVGTGGTNEKLFF | TRBV29-1*01 | null | TRBJ1-4*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GLCTLVAML | BMLF1 | EBV | PMID:27645996 | tetramer-sort,beads | 6/27 | yes | sanger | null | null | CD8+ | healthy | H3 | null | null | BMLF-1 | PBMC | HLA-A*02:01,HLA-A*03:02,HLA-B*18:01,HLA-B*35:08 | null | null | {'cdr3': 'CAESTGKLIF', 'cdr3_old': 'CAESTGKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ37*01', 'jStart': 4, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV5*01'} | {'cdr3': 'CSVGTGGTNEKLFF', 'cdr3_old': 'CSVGTGGTNEKLFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-4*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV29-1*01'} | 3 | 0a2f58c3a331352b4a45ff40042dc99c2aa12b77e9f91382f292ace1bdaad747 | 26 | 0.853121 | 93.289375 | 0.887535 | 0.844518 | 0.837325 | 49.886299 | 7.5497 | false |
3,527 | CAEDNNARLMF | TRAV5*01 | TRAJ31*01 | CSARIGVGNTIYF | TRBV20-1*01 | null | TRBJ1-3*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GLCTLVAML | BMLF1 | EBV | PMID:27645996 | tetramer-sort,beads | 1/27 | yes | sanger | null | null | CD8+ | healthy | H3 | null | null | BMLF-1 | PBMC | HLA-A*02:01,HLA-A*03:02,HLA-B*18:01,HLA-B*35:08 | null | null | {'cdr3': 'CAEDNNARLMF', 'cdr3_old': 'CAEDNNARLMF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ31*01', 'jStart': 4, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV5*01'} | {'cdr3': 'CSARIGVGNTIYF', 'cdr3_old': 'CSARIGVGNTIYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-3*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV20-1*01'} | 0 | c0b69c2915c85ea53e9773f0fc2f7895c7eda7c2df46226e0d66f468a8c53f90 | 25 | 0.873262 | 94.356727 | 0.899264 | 0.866762 | 0.863873 | 44.7561 | 4.119 | false |
4,026 | CVVNSPSGNTPLVF | TRAV12-1*01 | TRAJ29*01 | CSARDEKATNTGELFF | TRBV20-1*01 | null | TRBJ2-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | YLQPRTFLL | Spike | SARS-CoV-2 | PMID:33664060 | tetramer-sort | null | null | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CVVNSPSGNTPLVF', 'cdr3_old': 'CVVNSPSGNTPLVF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ29*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV12-1*01'} | {'cdr3': 'CSARDEKATNTGELFF', 'cdr3_old': 'CSARDEKATNTGELFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-2*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV20-1*01'} | 0 | 76fd2999937eb151522013749ca96b2fd70644567a6cfd07805bcd5dc048c0c6 | 32 | 0.747772 | 91.480959 | 0.806228 | 0.733158 | 0.683022 | 68.741501 | 0.935 | false |
4,027 | CVVNRDNDMRF | TRAV12-1*01 | TRAJ43*01 | CASMEENTGELFF | TRBV5-1*01 | null | TRBJ2-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | YLQPRTFLL | Spike | SARS-CoV-2 | PMID:33664060 | tetramer-sort | null | null | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CVVNRDNDMRF', 'cdr3_old': 'CVVNRDNDMRF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ43*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV12-1*01'} | {'cdr3': 'CASMEENTGELFF', 'cdr3_old': 'CASMEENTGELFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-2*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV5-1*01'} | 0 | b18e4e1f6a0b68de750ff5e9966ffa92acadbcaabeeda1fd6582a4ea86ce8158 | 32 | 0.926495 | 97.340462 | 0.936888 | 0.923897 | 0.913726 | 52.307899 | 0.6726 | false |
4,028 | CVVNNGDKLIF | TRAV12-1*01 | TRAJ34*01 | CASSPGTTLAKNIQYF | TRBV7-6*01 | null | TRBJ2-4*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | YLQPRTFLL | Spike | SARS-CoV-2 | PMID:33664060 | tetramer-sort | null | null | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CVVNNGDKLIF', 'cdr3_old': 'CVVNNGDKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ34*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV12-1*01'} | {'cdr3': 'CASSPGTTLAKNIQYF', 'cdr3_old': 'CASSPGTTLAKNIQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-4*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-6*01'} | 0 | 58be57270355dea28122861ad7d6adce39c3ceeacfe904111ad60f9ee68c7c37 | 23 | 0.584434 | 90.880473 | 0.667873 | 0.563574 | 0.419294 | 26.0891 | 0.6977 | false |
4,029 | CVVNGEDDMRF | TRAV12-1*01 | TRAJ43*01 | CASIRDHNTGELFF | TRBV5-4*01 | null | TRBJ2-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | YLQPRTFLL | Spike | SARS-CoV-2 | PMID:33664060 | tetramer-sort | null | null | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CVVNGEDDMRF', 'cdr3_old': 'CVVNGEDDMRF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ43*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV12-1*01'} | {'cdr3': 'CASIRDHNTGELFF', 'cdr3_old': 'CASIRDHNTGELFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-2*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV5-4*01'} | 0 | d17c419dd3b4c703a408bc0a2fb839a636319dc664e0f07cdee98c93256a3c5f | 24 | 0.809123 | 93.865901 | 0.843342 | 0.800568 | 0.745134 | 60.2855 | 0.6683 | false |
4,030 | CVVNGLGDDMRF | TRAV12-1*01 | TRAJ43*01 | CATQTANTGELFF | TRBV24-1*01 | null | TRBJ2-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | YLQPRTFLL | Spike | SARS-CoV-2 | PMID:33664060 | tetramer-sort | null | null | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CVVNGLGDDMRF', 'cdr3_old': 'CVVNGLGDDMRF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ43*01', 'jStart': 8, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV12-1*01'} | {'cdr3': 'CATQTANTGELFF', 'cdr3_old': 'CATQTANTGELFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-2*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV24-1*01'} | 0 | 6fadcc08353a0aaafc3cd8964a75f09ff928b35469a7618494578918ec4efe6b | 32 | 0.851108 | 95.053703 | 0.877113 | 0.844606 | 0.803577 | 56.096401 | 0.394 | false |
4,031 | CVVNSNNDMRF | TRAV12-1*01 | TRAJ43*01 | CASSELNTGELFF | TRBV2*01 | null | TRBJ2-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | YLQPRTFLL | Spike | SARS-CoV-2 | PMID:33664060 | tetramer-sort | null | null | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CVVNSNNDMRF', 'cdr3_old': 'CVVNSNNDMRF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ43*01', 'jStart': 5, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV12-1*01'} | {'cdr3': 'CASSELNTGELFF', 'cdr3_old': 'CASSELNTGELFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-2*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV2*01'} | 0 | 889cbf586750fb62a308bd32a8b41814555718a465358e4e6bd8b6591676ea3c | 29 | 0.858508 | 94.881957 | 0.883209 | 0.852332 | 0.821978 | 56.531101 | 5.3683 | false |
4,032 | CVVSAAYTGTASKLTF | TRAV10*01 | TRAJ44*01 | CATQTANTGELFF | TRBV24-1*01 | null | TRBJ2-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | YLQPRTFLL | Spike | SARS-CoV-2 | PMID:33664060 | tetramer-sort | null | null | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CVVSAAYTGTASKLTF', 'cdr3_old': 'CVVSAAYTGTASKLTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ44*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV10*01'} | {'cdr3': 'CATQTANTGELFF', 'cdr3_old': 'CATQTANTGELFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-2*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV24-1*01'} | 0 | e291427a2762655302fbe5bd98c183ee2823dc0640a71666befc350001978eb8 | 32 | 0.740754 | 92.330383 | 0.791922 | 0.727962 | 0.649836 | 61.688099 | 4.6932 | false |
4,033 | CVVNGMNDMRF | TRAV12-1*01 | TRAJ43*01 | CAAGDANTGELFF | TRBV5-1*01 | null | TRBJ2-2*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | YLQPRTFLL | Spike | SARS-CoV-2 | PMID:33664060 | tetramer-sort | null | null | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CVVNGMNDMRF', 'cdr3_old': 'CVVNGMNDMRF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ43*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV12-1*01'} | {'cdr3': 'CAAGDANTGELFF', 'cdr3_old': 'CAAGDANTGELFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-2*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 2, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV5-1*01'} | 0 | 24cae4b35e91b1c956760f86e2a6a3729d65798cf00f4226509cf11959074981 | 32 | 0.883391 | 95.717878 | 0.910239 | 0.876679 | 0.866295 | 51.718102 | 0.5206 | false |
4,066 | CATETSNYQLIW | TRAV17*01 | TRAJ33*01 | CASSPGTAPNEKLFF | TRBV28*01 | null | TRBJ1-4*01 | HomoSapiens | HLA-B*35:01 | B2M | MHCI | IPSINVHHY | pp65 | CMV | PMID:17459926 | tetramer-sort,cultured-T-cells | 4/4 | null | sanger | null | null | null | CMV-seropositive | null | null | null | null | null | HLA-B*35:01 | null | null | {'cdr3': 'CATETSNYQLIW', 'cdr3_old': 'CATETSNYQLIW', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ33*01', 'jStart': 5, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV17*01'} | {'cdr3': 'CASSPGTAPNEKLFF', 'cdr3_old': 'CASSPGTAPNEKLFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-4*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV28*01'} | 1 | f458d3014491dc9d9b6d95a4db54c3543439fbf955dbfcdf092bb71d2f39d042 | 17 | 0.587079 | 89.438525 | 0.66829 | 0.566776 | 0.385223 | 45.7132 | 10.5845 | false |
4,232 | CAESTSGGKLIF | TRAV5*01 | TRAJ37*01 | CSVGTGGTNEKLFF | TRBV29-1*01 | null | TRBJ1-4*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GLCTLVAML | BMLF1 | EBV | PMID:34811538 | tetramer-sort | null | yes | amplicon-seq | antigen-loaded-targets | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAESTSGGKLIF', 'cdr3_old': 'CAESTSGGKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ37*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV5*01'} | {'cdr3': 'CSVGTGGTNEKLFF', 'cdr3_old': 'CSVGTGGTNEKLFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-4*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV29-1*01'} | 2 | 05b8abc26471cc2941924f22fe4a173271631c7f1c328c8dee2770ea908293ad | 28 | 0.849573 | 92.823195 | 0.88775 | 0.840029 | 0.833138 | 50.439899 | 7.6547 | false |
4,233 | CVVNGKDSSYKLIF | TRAV12-1*01 | TRAJ12*01 | CASSGGAVAPSEQFF | TRBV2*01 | null | TRBJ2-1*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | GLCTLVAML | BMLF1 | EBV | PMID:34811538 | tetramer-sort | null | yes | amplicon-seq | antigen-loaded-targets | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CVVNGKDSSYKLIF', 'cdr3_old': 'CVVNGKDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV12-1*01'} | {'cdr3': 'CASSGGAVAPSEQFF', 'cdr3_old': 'CASSGGAVAPSEQFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-1*01', 'jStart': 11, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV2*01'} | 2 | c137892ce96bff537643676cc645c9af32c4ee4a31e9550831c21c2ca9e29850 | 27 | 0.766387 | 92.361667 | 0.811524 | 0.755103 | 0.678415 | 62.341702 | 0.2242 | false |
4,252 | CAVNYGNKLVF | TRAV3*01 | TRAJ47*01 | CASSPFSGAPYEQYF | TRBV27*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | NLVPMVATV | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAVNYGNKLVF', 'cdr3_old': 'CAVNYGNKLVF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ47*01', 'jStart': 4, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV3*01'} | {'cdr3': 'CASSPFSGAPYEQYF', 'cdr3_old': 'CASSPFSGAPYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 10, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV27*01'} | 0 | e6fadb59562bd6c5cc8546807b14bcf2c4d48e65918898326bf25e3cad2e4af1 | 15 | 0.894385 | 95.250986 | 0.910588 | 0.890334 | 0.870432 | 52.7472 | 3.1252 | false |
4,253 | CAVRDISARLMF | TRAV3*01 | TRAJ31*01 | CASSSVTEAFF | TRBV12-4*01 | null | TRBJ1-1*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | NLVPMVATV | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAVRDISARLMF', 'cdr3_old': 'CAVRDISARLMF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ31*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV3*01'} | {'cdr3': 'CASSSVTEAFF', 'cdr3_old': 'CASSSVTEAFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-1*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV12-4*01'} | 2 | a67e73e7c1f6f6e6815de5d15d60ea9f21f98fe6c17a78c3601cfc30edfb34fc | 25 | 0.901952 | 95.419859 | 0.916602 | 0.898289 | 0.891143 | 44.9034 | 2.2106 | false |
4,254 | CAVRDVSARLMF | TRAV3*01 | TRAJ31*01 | CASSSVNEQYF | TRBV12-4*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | NLVPMVATV | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAVRDVSARLMF', 'cdr3_old': 'CAVRDVSARLMF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ31*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV3*01'} | {'cdr3': 'CASSSVNEQYF', 'cdr3_old': 'CASSSVNEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV12-4*01'} | 0 | c93675cd74d779900662d8af4b01fe4ff6b4fc0db2730562b99a1bcd94f8b88d | 24 | 0.895676 | 96.022663 | 0.912138 | 0.891561 | 0.882794 | 46.924 | 4.0379 | false |
4,255 | CAGGGSSNTGKLIF | TRAV8-3*01 | TRAJ37*01 | CASTPFASTEAFF | TRBV6-5*01 | null | TRBJ1-1*01 | HomoSapiens | HLA-A*02:01 | B2M | MHCI | NLVPMVATV | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAGGGSSNTGKLIF', 'cdr3_old': 'CAGGGSSNTGKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ37*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 2, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV8-3*01'} | {'cdr3': 'CASTPFASTEAFF', 'cdr3_old': 'CASTPFASTEAFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-1*01', 'jStart': 8, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV6-5*01'} | 0 | 29815830af285adaaeb5590f380aec054728b2b674b0d4768f205bd0653d204a | 23 | 0.833016 | 93.039942 | 0.86257 | 0.825627 | 0.785317 | 48.701099 | 2.9484 | false |
4,257 | CAASIGAFGNEKLTF | TRAV23/DV6*01 | TRAJ48*01 | CASSPHRNTEAFF | TRBV4-3*01 | null | TRBJ1-1*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | RPHERNGFTVL | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAASIGAFGNEKLTF', 'cdr3_old': 'CAASIGAFGNEKLTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ48*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV23/DV6*01'} | {'cdr3': 'CASSPHRNTEAFF', 'cdr3_old': 'CASSPHRNTEAFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-1*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV4-3*01'} | 0 | 13af3c31abe6a201687a7d5e4bdf4ff2eabc17a87a1937058b6006633e1d1df9 | 21 | 0.511532 | 89.643852 | 0.614543 | 0.48578 | 0.296529 | 21.2787 | 15.608 | false |
4,260 | CAMREGRDSSYKLIF | TRAV14/DV4*01 | TRAJ12*01 | CASSLLQGARTEAFF | TRBV7-9*01 | null | TRBJ1-1*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAMREGRDSSYKLIF', 'cdr3_old': 'CAMREGRDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV14/DV4*01'} | {'cdr3': 'CASSLLQGARTEAFF', 'cdr3_old': 'CASSLLQGARTEAFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-1*01', 'jStart': 10, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | ee4c8fbbca0e5f7f3a3a23bb4e2635ce5192c38a431066612a9b4e4aa2927417 | 23 | 0.918587 | 96.176296 | 0.930271 | 0.915666 | 0.901895 | 63.208698 | 11.3629 | false |
4,261 | CAMREGSDSSYKLIF | TRAV14/DV4*01 | TRAJ12*01 | CASSSHDRHGIGSPLHF | TRBV7-9*01 | null | TRBJ1-6*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAMREGSDSSYKLIF', 'cdr3_old': 'CAMREGSDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV14/DV4*01'} | {'cdr3': 'CASSSHDRHGIGSPLHF', 'cdr3_old': 'CASSSHDRHGIGSPLHF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-6*01', 'jStart': 12, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | 34b7b80fb708bec052155b2a7a40d2e72ac97186d25add6eb78bc1692202829a | 18 | 0.919883 | 95.946096 | 0.930287 | 0.917282 | 0.90254 | 64.054199 | 10.5424 | false |
4,262 | CATEERMDSSYKLIF | TRAV17*01 | TRAJ12*01 | CASSDRTEGDYEQYF | TRBV7-9*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CATEERMDSSYKLIF', 'cdr3_old': 'CATEERMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV17*01'} | {'cdr3': 'CASSDRTEGDYEQYF', 'cdr3_old': 'CASSDRTEGDYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 10, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | 974ebba0c791bd888b25c32b523b6fb0b95533b5e8b167c6f53cee7b7a5859da | 19 | 0.875937 | 94.171417 | 0.896839 | 0.870711 | 0.856586 | 53.850899 | 11.092 | false |
4,263 | CATEERMDSSYKLIF | TRAV17*01 | TRAJ12*01 | CASSNRDRGAYEQYF | TRBV7-9*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CATEERMDSSYKLIF', 'cdr3_old': 'CATEERMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV17*01'} | {'cdr3': 'CASSNRDRGAYEQYF', 'cdr3_old': 'CASSNRDRGAYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 10, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | 6a6d327a9f566e98c30cce1135ccc04ad27add834fa3753fdd0c771509921d86 | 18 | 0.871485 | 94.299849 | 0.893632 | 0.865949 | 0.848233 | 57.195999 | 11.2953 | false |
4,269 | CAVRERMDSSYKLIF | TRAV3*01 | TRAJ12*01 | CASSLGLGTGHPNEKLFF | TRBV7-9*01 | null | TRBJ1-4*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAVRERMDSSYKLIF', 'cdr3_old': 'CAVRERMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV3*01'} | {'cdr3': 'CASSLGLGTGHPNEKLFF', 'cdr3_old': 'CASSLGLGTGHPNEKLFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-4*01', 'jStart': 12, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | 3cd07336647eb7fb5b474f32a21e4e163b09cab00fc69b1345b09500556203d6 | 10 | 0.887037 | 95.572583 | 0.905568 | 0.882405 | 0.850839 | 23.5299 | 0.5496 | false |
4,270 | CAVRGRMDSSYKLIF | TRAV12-2*01 | TRAJ12*01 | CASSSHEVQGYNSPLHF | TRBV7-9*01 | null | TRBJ1-6*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAVRGRMDSSYKLIF', 'cdr3_old': 'CAVRGRMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV12-2*01'} | {'cdr3': 'CASSSHEVQGYNSPLHF', 'cdr3_old': 'CASSSHEVQGYNSPLHF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-6*01', 'jStart': 10, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | 6638c98f7d3898a22b0fa232673f4e2bfcc9d5ac35d901342c21336d27ff47f2 | 24 | 0.873524 | 94.031071 | 0.894289 | 0.868332 | 0.834017 | 51.636501 | 9.326 | false |
4,272 | CAVWTLSGSARQLTF | TRAV21*01 | TRAJ22*01 | CASSTRDRGSYEQYF | TRBV7-9*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAVWTLSGSARQLTF', 'cdr3_old': 'CAVWTLSGSARQLTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ22*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV21*01'} | {'cdr3': 'CASSTRDRGSYEQYF', 'cdr3_old': 'CASSTRDRGSYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | 49f23c4afd200f63332b1dbfef409b904f485c7c65bbb3781046424701305845 | 25 | 0.798754 | 92.873502 | 0.836268 | 0.789376 | 0.715067 | 59.672798 | 4.7597 | false |
4,275 | CAASIGNFGNEKLTF | TRAV23/DV6*01 | TRAJ48*01 | CASSPQRNTEAFF | TRBV4-3*01 | null | TRBJ1-1*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | RPHERNGFTVL | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAASIGNFGNEKLTF', 'cdr3_old': 'CAASIGNFGNEKLTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ48*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV23/DV6*01'} | {'cdr3': 'CASSPQRNTEAFF', 'cdr3_old': 'CASSPQRNTEAFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-1*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV4-3*01'} | 0 | 6b4a11c5ad71e9b9b3a6711cfe7b52882b527c32ca47e52ea209917923a08353 | 20 | 0.489662 | 89.154217 | 0.596524 | 0.462946 | 0.247489 | 25.815701 | 25.4186 | false |
4,276 | CAASIGNFGNEKLTF | TRAV23/DV6*01 | TRAJ48*01 | CASSPSRNTEAFF | TRBV4-3*01 | null | TRBJ1-1*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | RPHERNGFTVL | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAASIGNFGNEKLTF', 'cdr3_old': 'CAASIGNFGNEKLTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ48*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV23/DV6*01'} | {'cdr3': 'CASSPSRNTEAFF', 'cdr3_old': 'CASSPSRNTEAFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-1*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV4-3*01'} | 0 | a137dc02a7eba80dfbfb45c5c4d6d4d0551f05ec13685973c503f3e574244765 | 0 | 0.526179 | 87.054748 | 0.624198 | 0.501675 | 0.332093 | null | null | false |
4,278 | CAASVGNFGNEKLTF | TRAV23/DV6*01 | TRAJ48*01 | CASSPYRNTEAFF | TRBV4-3*01 | null | TRBJ1-1*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | RPHERNGFTVL | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAASVGNFGNEKLTF', 'cdr3_old': 'CAASVGNFGNEKLTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ48*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV23/DV6*01'} | {'cdr3': 'CASSPYRNTEAFF', 'cdr3_old': 'CASSPYRNTEAFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-1*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV4-3*01'} | 0 | 4da647a1f10afe067ff61f591ea2f10e08ba1d9e26e5128297503844b35494cf | 0 | 0.706266 | 90.550063 | 0.762929 | 0.6921 | 0.602699 | null | null | false |
4,281 | CATEYRMDSSYKLIF | TRAV17*01 | TRAJ12*01 | CASSFRDRGNYEQYF | TRBV7-9*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CATEYRMDSSYKLIF', 'cdr3_old': 'CATEYRMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV17*01'} | {'cdr3': 'CASSFRDRGNYEQYF', 'cdr3_old': 'CASSFRDRGNYEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 10, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | 0ba466e48c108a63702c3325651d67a54a655afe59c19f5fac1d61022eb925f4 | 9 | 0.832472 | 93.583828 | 0.863721 | 0.82466 | 0.785609 | 18.7094 | 7.6549 | false |
4,282 | CATKIRMDSSYKLIF | TRAV17*01 | TRAJ12*01 | CASSYDTGLTEQYF | TRBV7-9*01 | null | TRBJ2-7*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CATKIRMDSSYKLIF', 'cdr3_old': 'CATKIRMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV17*01'} | {'cdr3': 'CASSYDTGLTEQYF', 'cdr3_old': 'CASSYDTGLTEQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-7*01', 'jStart': 10, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | ee8e7462310fb721841d0bbd9e147a053528a062ebf69be196886e8a613e41b0 | 24 | 0.882228 | 94.164424 | 0.901627 | 0.877378 | 0.866229 | 49.284599 | 11.5245 | false |
4,283 | CATVHRMDSSYKLIF | TRAV17*01 | TRAJ12*01 | CASSLIGVSPYNEQFF | TRBV7-9*01 | null | TRBJ2-1*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CATVHRMDSSYKLIF', 'cdr3_old': 'CATVHRMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV17*01'} | {'cdr3': 'CASSLIGVSPYNEQFF', 'cdr3_old': 'CASSLIGVSPYNEQFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-1*01', 'jStart': 10, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | 6eb1aea5fc816f27d0e5e74291e8818f852ec012c147791983be3e0352c51d71 | 23 | 0.79506 | 92.408952 | 0.833722 | 0.785395 | 0.72439 | 52.848099 | 9.9394 | false |
4,284 | CATVLRMDSSYKLIF | TRAV17*01 | TRAJ12*01 | CASSLIGVSSYNEQFF | TRBV7-9*01 | null | TRBJ2-1*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CATVLRMDSSYKLIF', 'cdr3_old': 'CATVLRMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV17*01'} | {'cdr3': 'CASSLIGVSSYNEQFF', 'cdr3_old': 'CASSLIGVSSYNEQFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-1*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | ee6b03f01ad7e067c46343645b30d2f8bc48ccedb916473139f7c4f8aeb7f0ac | 23 | 0.885616 | 93.66603 | 0.902885 | 0.881299 | 0.871706 | 51.9902 | 10.6626 | false |
4,289 | CAVRSRMDSSYKLIF | TRAV3*01 | TRAJ12*01 | CASSSHDRDGGHSPLHF | TRBV7-9*01 | null | TRBJ1-6*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAVRSRMDSSYKLIF', 'cdr3_old': 'CAVRSRMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV3*01'} | {'cdr3': 'CASSSHDRDGGHSPLHF', 'cdr3_old': 'CASSSHDRDGGHSPLHF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-6*01', 'jStart': 12, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | d492e4c1bfe7df94e7c73ea4ae7f260fb912bb87e9fd6e42ac51bbed48b7ca15 | 22 | 0.876714 | 94.698868 | 0.896497 | 0.871768 | 0.836266 | 51.718399 | 9.4412 | false |
4,297 | CATERRMDSSYKLIF | TRAV17*01 | TRAJ12*01 | CASSLREGPYPETQYF | TRBV7-9*01 | null | TRBJ2-5*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CATERRMDSSYKLIF', 'cdr3_old': 'CATERRMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV17*01'} | {'cdr3': 'CASSLREGPYPETQYF', 'cdr3_old': 'CASSLREGPYPETQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-5*01', 'jStart': 11, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | 89af812c546f748c81e318b8fee0d6e4e6ba93038f698add734696b7a9792f33 | 23 | 0.759278 | 92.758618 | 0.807704 | 0.747172 | 0.671443 | null | null | false |
4,298 | CATVVRMDSSYKLIF | TRAV17*01 | TRAJ12*01 | CASSLIGVGERDTQYF | TRBV7-9*01 | null | TRBJ2-3*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CATVVRMDSSYKLIF', 'cdr3_old': 'CATVVRMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV17*01'} | {'cdr3': 'CASSLIGVGERDTQYF', 'cdr3_old': 'CASSLIGVGERDTQYF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-3*01', 'jStart': 11, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | 54466cba6720076dc12773d6877742b4bcf29235c9dbce9fd426158791c6cfef | 19 | 0.869516 | 93.647112 | 0.890943 | 0.86416 | 0.844385 | 51.7505 | 10.9638 | false |
4,300 | CAVRGLMDSSYKLIF | TRAV3*01 | TRAJ12*01 | CASSFHDREGVGSPLHF | TRBV7-9*01 | null | TRBJ1-6*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAVRGLMDSSYKLIF', 'cdr3_old': 'CAVRGLMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV3*01'} | {'cdr3': 'CASSFHDREGVGSPLHF', 'cdr3_old': 'CASSFHDREGVGSPLHF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-6*01', 'jStart': 12, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | ff554b70f58b83d03b885520c96ed930dbd13a530a969ba54cc5b7b6267ef411 | 27 | 0.833726 | 93.229176 | 0.862962 | 0.826417 | 0.766699 | 53.665001 | 9.509 | false |
4,310 | CAMRVGMDSSYKLIF | TRAV14/DV4*01 | TRAJ12*01 | CASSTHDLQGPSSPLHF | TRBV7-9*01 | null | TRBJ1-6*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAMRVGMDSSYKLIF', 'cdr3_old': 'CAMRVGMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV14/DV4*01'} | {'cdr3': 'CASSTHDLQGPSSPLHF', 'cdr3_old': 'CASSTHDLQGPSSPLHF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-6*01', 'jStart': 12, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | 8b53752dc01c9a2d26afb64cd409a71de19be1ebaa0f9886bec143da9a354cbc | 21 | 0.904043 | 95.279186 | 0.917304 | 0.900728 | 0.877195 | 63.735901 | 11.2107 | false |
4,311 | CARSTF | TRAV12-2*01 | TRAJ27*01 | CASSLIGISSYNEQFF | TRBV7-9*01 | null | TRBJ2-1*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CARSTF', 'cdr3_old': 'CARSTF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ27*01', 'jStart': 3, 'vCanonical': True, 'vEnd': 2, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV12-2*01'} | {'cdr3': 'CASSLIGISSYNEQFF', 'cdr3_old': 'CASSLIGISSYNEQFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-1*01', 'jStart': 9, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | 64f8d9a586ddbbb556c5a62394d7d74301b178e3f880953c5d9016802fd6bda9 | 19 | 0.878935 | 93.123588 | 0.897209 | 0.874366 | 0.860598 | 39.005501 | 4.5036 | false |
4,325 | CAMREGQDSSYKLIF | TRAV14/DV4*01 | TRAJ12*01 | CASSIHHRGSSSPLHF | TRBV7-9*01 | null | TRBJ1-6*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAMREGQDSSYKLIF', 'cdr3_old': 'CAMREGQDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV14/DV4*01'} | {'cdr3': 'CASSIHHRGSSSPLHF', 'cdr3_old': 'CASSIHHRGSSSPLHF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-6*01', 'jStart': 11, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | 3ca6caa8c2fd6f42dbc841ebae75c156fbf5ca127d3d7455ac0fcedcd8195c46 | 24 | 0.891743 | 95.154448 | 0.908325 | 0.887598 | 0.858045 | 63.620499 | 9.7666 | false |
4,326 | CAMREGWDSSYKLIF | TRAV14/DV4*01 | TRAJ12*01 | CASSTHDRSGVGSPLHF | TRBV7-9*01 | null | TRBJ1-6*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAMREGWDSSYKLIF', 'cdr3_old': 'CAMREGWDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 7, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV14/DV4*01'} | {'cdr3': 'CASSTHDRSGVGSPLHF', 'cdr3_old': 'CASSTHDRSGVGSPLHF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-6*01', 'jStart': 12, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | a65d5e4f885c92e60f7074e491fee30be4c2645098a6f79f03587aef0959f41a | 21 | 0.915825 | 95.800455 | 0.927233 | 0.912972 | 0.897135 | 63.1203 | 10.295 | false |
4,327 | CATVIRMDSSYKLIF | TRAV17*01 | TRAJ12*01 | CASSLVGSGQGDEQFF | TRBV7-9*01 | null | TRBJ2-1*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CATVIRMDSSYKLIF', 'cdr3_old': 'CATVIRMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV17*01'} | {'cdr3': 'CASSLVGSGQGDEQFF', 'cdr3_old': 'CASSLVGSGQGDEQFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-1*01', 'jStart': 12, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | ed0532283e5313f04d52032795093573edaafb6d39bfe5832329bc9c18be82ee | 19 | 0.852846 | 93.015591 | 0.877095 | 0.846784 | 0.821874 | 49.669899 | 10.9236 | false |
4,335 | CAVRLRMDSSYKLIF | TRAV3*01 | TRAJ12*01 | CASSYHDLGGAGSPLHF | TRBV7-9*01 | null | TRBJ1-6*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAVRLRMDSSYKLIF', 'cdr3_old': 'CAVRLRMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV3*01'} | {'cdr3': 'CASSYHDLGGAGSPLHF', 'cdr3_old': 'CASSYHDLGGAGSPLHF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-6*01', 'jStart': 12, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | 4f697c269690bd9527fe9815f30f6a9acd91dd9ca497e2f720f5da1d877e6a67 | 23 | 0.871791 | 94.121207 | 0.891323 | 0.866908 | 0.833468 | 50.6464 | 9.4607 | false |
4,340 | CAMREGMDSSYKLIF | TRAV14/DV4*01 | TRAJ12*01 | CASSTHDLGGVGSPLHF | TRBV7-9*01 | null | TRBJ1-6*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAMREGMDSSYKLIF', 'cdr3_old': 'CAMREGMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV14/DV4*01'} | {'cdr3': 'CASSTHDLGGVGSPLHF', 'cdr3_old': 'CASSTHDLGGVGSPLHF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-6*01', 'jStart': 12, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | b4de99a2180d4e6680879e49517da354ca24c6c084726a3216dd5331a253213b | 22 | 0.919395 | 95.889904 | 0.930103 | 0.916718 | 0.901567 | 64.740303 | 11.5888 | false |
4,344 | CAVRGPMDSSYKLIF | TRAV3*01 | TRAJ12*01 | CASSSHDETGVGSPLHF | TRBV7-9*01 | null | TRBJ1-6*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CAVRGPMDSSYKLIF', 'cdr3_old': 'CAVRGPMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV3*01'} | {'cdr3': 'CASSSHDETGVGSPLHF', 'cdr3_old': 'CASSSHDETGVGSPLHF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ1-6*01', 'jStart': 12, 'vCanonical': True, 'vEnd': 4, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | 58adfe4b5562389acfbfc90a4e7061d5fc93a5b6acb4b15730e09ec25ed671b6 | 22 | 0.892035 | 95.357292 | 0.908657 | 0.88788 | 0.858308 | null | null | false |
4,346 | CATVLRMDSSYKLIF | TRAV17*01 | TRAJ12*01 | CASSLVGVGLSDEQFF | TRBV7-9*01 | null | TRBJ2-1*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CATVLRMDSSYKLIF', 'cdr3_old': 'CATVLRMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 3, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV17*01'} | {'cdr3': 'CASSLVGVGLSDEQFF', 'cdr3_old': 'CASSLVGVGLSDEQFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-1*01', 'jStart': 12, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | 8bc95e8bebcf39f85d171fb3cb4c53c2d92b95cf7f73de13e1c399f58a1cbe02 | 23 | 0.853818 | 93.082967 | 0.878228 | 0.847715 | 0.822557 | 48.084999 | 11.2876 | false |
4,347 | CATVVRMDSSYKLIF | TRAV16*01 | TRAJ12*01 | CASSLVGQGLSDEQFF | TRBV7-9*01 | null | TRBJ2-1*01 | HomoSapiens | HLA-B*07:02 | B2M | MHCI | TPRVTGGGAM | pp65 | CMV | PMID:34793243 | tetramer-sort | null | yes | amplicon-seq | null | null | CD8+ | null | null | null | null | null | PBMC | null | null | null | {'cdr3': 'CATVVRMDSSYKLIF', 'cdr3_old': 'CATVVRMDSSYKLIF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRAJ12*01', 'jStart': 6, 'vCanonical': True, 'vEnd': 2, 'vFixType': 'NoFixNeeded', 'vId': 'TRAV16*01'} | {'cdr3': 'CASSLVGQGLSDEQFF', 'cdr3_old': 'CASSLVGQGLSDEQFF', 'fixNeeded': False, 'good': True, 'jCanonical': True, 'jFixType': 'NoFixNeeded', 'jId': 'TRBJ2-1*01', 'jStart': 12, 'vCanonical': True, 'vEnd': 5, 'vFixType': 'NoFixNeeded', 'vId': 'TRBV7-9*01'} | 0 | 5b8462c69f9f3a3c7afbee2b4787004d9444a620a3d5ea7cfa2589e212d17f58 | 20 | 0.82091 | 92.263382 | 0.852869 | 0.81292 | 0.760225 | 47.905201 | 10.3115 | false |
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Predicted structures for VDJdb records
This repository contains structure data for selected VDJdb records obtained using AI-based modelling in data/ folder:
pdb_files.tgzcontains predicted TCR:pMHC structures with canonical chain names, orientation and placement, superimposed by aligning and rotation. File names start withtcr_pmhc_hashwhich must be used for connecting the structure with the VDJdb record.pdb_files_native.tgzcontains real TCR:pMHC structures from PDB, processed to canonical coordinated in the same way aspdb_files.tgz.coordinates_aa.tgzcontains tables with amino acid Ca atom coordinates for each residue of deposited structures.contacts_aa.tgzcontains files with residue pairs at a distance <= 5A for each of the deposited structures. Currently only TCR alpha CDR3-peptide and beta CDR3-peptide are considered.complementarity_maps.tgzandcomplementarity_maps_simplified.tgzcontains 2D projections of TCR alpha CDR3, TCR beta CDR3 and peptide residue coordinates in for of SVG plots produced by matplotlib.
Metadata for all structures is concatenated with corresponding VDJdb record metadata and stored in vdjdb_structures_metadata.tsv.gz. The file contains default VDJdb "full table" columns together with the following columns calculated for each structure:
num_contacts- number of contacts in the available structure between TCR and peptide.ranking_confidence,plddt,ptm,iptm,tcr_pmhc_iptm- TCRmodel2 quality metrics (for more information please visit TCRmodel2 webpage).scanning_angleandpitch_angle- scanning and pitch TCR:pMHC structure angles calculated with STCRpy.is_native- whether the structure is experimentally acquired (from PDB) or predicted.tcr_pmhc_hash- unique TCR:pMHC record hash for matching predicted structure PDBs.
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