@context dict | @id stringlengths 48 48 | @type stringclasses 1
value | schema:identifier stringlengths 12 12 | anchorSeedId stringlengths 31 50 | backgroundAccession stringlengths 10 20 | abundanceIndex float64 0.16 0.39 | abundanceProfile dict | metabolicPathwayPrediction listlengths 3 5 | periodontalCorrelation float64 0.12 0.82 | systemicRisk dict | generatedSequence stringlengths 128 128 | modelBackend stringclasses 1
value | generatedAt timestamp[s]date 2026-06-25 09:06:45 2026-06-30 02:08:13 | postHocCalibratedAt timestamp[s]date 2026-06-30 07:18:23 2026-06-30 07:18:23 | previewSubset bool 1
class | previewVersion stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_0_000000 | ChineseAnchoredMicrobiomeRecord | syn_0_000000 | CN_mock_Streptococcus_mutans_0003 | NZ_GL831130.1 | 0.194755 | {
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"Tannerella"... | [
{
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},
{
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"name": "Citrate cycle (TCA cycle)",
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},
{
"id": "ko00010",
"name": "Glycolysis / Gluconeogenesis",
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},
{
"id": "ko0019... | 0.3 | {
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"cardiovascularRiskScore": 0.139,
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} | GAAAAGCAAAAAAAAGACCACAACAAAAGTGGTCTTTTTAATATATTATTAAATAATAAATAATATTAATAATTAAATAAATAAAAAATAATTTTTATTATTATAATTATTATTATTTTTATTTTTTT | evo | 2026-06-25T09:17:53 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_0_000105 | ChineseAnchoredMicrobiomeRecord | syn_0_000105 | CN_mock_Capnocytophaga_gingivalis_0010 | PKQN01000003.1 | 0.269229 | {
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"Tannerella... | [
{
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},
{
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"name": "Photosynthesis (nitrate reduction proxy)",
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},
{
"id": "ko05132",
"name": "Salmonella infection (inflammatory axis)",
"co... | 0.3 | {
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} | TTTTTTTTTGCTTTTTTTTTGAATTTTTTTTTAAAAAAAAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | evo | 2026-06-25T09:41:55 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_0_000209 | ChineseAnchoredMicrobiomeRecord | syn_0_000209 | CN_mock_Prevotella_intermedia_0017 | NZ_JBZEMO010000024.1 | 0.339364 | {
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"Tannerella":... | [
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{
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},
{
"id": "ko00195",
"name": "Photosynthesis (nitrate reduction proxy)",
"confidence": 0.90... | 0.2415 | {
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} | TTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | evo | 2026-06-25T10:19:53 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_0_000314 | ChineseAnchoredMicrobiomeRecord | syn_0_000314 | CN_mock_Veillonella_parvula_0024 | NZ_ADOB02000051.1 | 0.293315 | {
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"Tannerell... | [
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{
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},
{
"id": "ko04080",
"name": "Neuroactive ligand-receptor (periodontal-neural)",
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}
] | 0.3 | {
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} | TTAATTTTTTTTGATAAAAAAAAGCACCTTTTCAGGTGCTTTTTTTATTAAAAAATAATTAATTATTCTTTTTTTATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | evo | 2026-06-25T10:43:54 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_0_000418 | ChineseAnchoredMicrobiomeRecord | syn_0_000418 | CN_mock_Neisseria_subflava_0013 | NZ_ADOB02000048.1 | 0.192921 | {
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"Tannerella... | [
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{
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},
{
"id": "ko00010",
"name": "Glycolysis / Gluconeogenesis",
"... | 0.1184 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.3711,
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} | GCTTTTTTTGTTTTTAATAATTTTTTTATTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | evo | 2026-06-30T01:38:09 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_1_000039 | ChineseAnchoredMicrobiomeRecord | syn_1_000039 | CN_mock_Aggregatibacter_actinomycetemcomitans_0006 | OQ947787.1 | 0.206555 | {
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"Tannerella"... | [
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{
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"name": "Salmonella infection (inflammatory axis)",
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},
{
"id": "ko05130",
"name": "Pathogenic Escherichia coli infection (oral pathobiont)",
"confidence... | 0.3 | {
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"cardiovascularRiskScore": 0.1535,
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} | CGAAAAAACCACTTTGGCATGAGGCCGGGGTGTTTTTTTATGCCCATTTTTTAACATTTTTTAATTTTAATTTTATAAAAAATTAATTTTTAATTTTTAATATTAATTTTTTTTATTTTTTATTTTTT | evo | 2026-06-25T10:50:15 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_0_000144 | ChineseAnchoredMicrobiomeRecord | syn_0_000144 | CN_mock_Lactobacillus_salivarius_0009 | NZ_JASPFF010000101.1 | 0.230363 | {
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"Tannerel... | [
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{
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},
{
"id": "ko00010",
"name": "Glycolysis / Gluconeogenesis",
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},
{
"id... | 0.1184 | {
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"cardiovascularRiskScore": 0.3711,
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} | GCATTTTTTTGCTCTCATTTTTTTGAGCTTTTTTATTTTTTTTGTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | evo | 2026-06-26T03:08:34 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_0_000248 | ChineseAnchoredMicrobiomeRecord | syn_0_000248 | CN_mock_Porphyromonas_gingivalis_0016 | NZ_WIJZ01000018.1 | 0.218128 | {
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"Tannerella"... | [
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},
{
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},
{
"id": "ko04080",
"name": "Neuroactive ligand-receptor (periodontal-neural)",
"co... | 0.3 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.1998,
"diabetesRiskScore": 0.2837,
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} | AAAAAAGAAAAACCCTCGCATCATCGCGGGGGTTTTTTAATATAAAAAAAGACATGACCAAAAACGGCCATGTCCGGAATGTTAGGAAAACTGCGCTTCATGCGTAGTTTTTTTATTTTTATAAAAAA | evo | 2026-06-26T03:33:53 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_0_000353 | ChineseAnchoredMicrobiomeRecord | syn_0_000353 | CN_mock_Rothia_mucilaginosa_0023 | NZ_AGBV01000002.1 | 0.28216 | {
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"Tannerella":... | [
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},
{
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},
{
"id": "ko00195",
"name": "Photosynthesis (nitrate reduction proxy)",
"confidence": 0.87... | 0.6709 | {
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"cardiovascularRiskScore": 0.2196,
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} | TTTTTTCTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | evo | 2026-06-26T03:59:25 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_0_000458 | ChineseAnchoredMicrobiomeRecord | syn_0_000458 | CN_mock_Eikenella_corrodens_0030 | NZ_JAJHPH010000025.1 | 0.201612 | {
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"Tannerella... | [
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},
{
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},
{
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"name": "Citrate cycle (TCA cycle)",
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},
{
"id": "... | 0.3 | {
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"cardiovascularRiskScore": 0.1998,
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} | TTCAAAACAAAAAACCCCGCACAAGGCGGGGCAGGGAAGATTTGCGCCTGGGGTACCCCGGCCGTCGTCGTAGCGCGACCCCCGGAACAAAACAGGCCCCAGCACCGCACTGCCGCGGGCCGGACCGA | evo | 2026-06-26T04:24:56 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_2_000078 | ChineseAnchoredMicrobiomeRecord | syn_2_000078 | CN_mock_Treponema_denticola_0005 | PQ301245.1 | 0.233895 | {
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"Tannerell... | [
{
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},
{
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},
{
"id": "ko00550",
"name": "Peptidoglycan biosynthesis",
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},
{
"... | 0.5622 | {
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"cardiovascularRiskScore": 0.2275,
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} | TACTGACCTTATTGTCAGTAATTTTTTTGGTTTTTCATCATTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | evo | 2026-06-25T09:39:30 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_2_000183 | ChineseAnchoredMicrobiomeRecord | syn_2_000183 | CN_mock_Campylobacter_rectus_0012 | PQ301238.1 | 0.241435 | {
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"Tannerell... | [
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},
{
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"confidence": 0.5936
},
{
"id": "ko00195",
"name": "Photosynthesis (nitrate reduction proxy)",
"confidence": 0.72... | 0.3 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.1012,
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} | GGCTTATTCCCTCACCACATCGGGCTTCGGCCATCCATGGCCTCTCGGCATTGACTCACCATCCGCGACGGCGGGTGCTGAATACTGAGGCAGGCGCGGCCGGCCTTGCGCCGCGCCCGGCGCGGCAC | evo | 2026-06-25T10:06:18 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_2_000287 | ChineseAnchoredMicrobiomeRecord | syn_2_000287 | CN_mock_Neisseria_subflava_0013 | NZ_JAJHPH010000023.1 | 0.231542 | {
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"Tannerell... | [
{
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},
{
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"name": "Pathogenic Escherichia coli infection (oral pathobiont)",
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},
{
"id": "ko00010",
"name": "Glycolysis / Gluconeogenesis",
"... | 0.1568 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.1967,
"diabetesRiskScore": 0.6465,
"inflammatoryLoadIndex": 0.0752
} | TTTTTTTCTTTTTTTATTTTTTTTAATTTTTTTTTAAAAAAATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | evo | 2026-06-30T01:47:47 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_2_000392 | ChineseAnchoredMicrobiomeRecord | syn_2_000392 | CN_mock_Porphyromonas_gingivalis_0016 | PKQN01000007.1 | 0.265985 | {
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"Tannerella... | [
{
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},
{
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"name": "Citrate cycle (TCA cycle)",
"confidence": 0.8633
},
{
"id": "ko04080",
"name": "Neuroactive ligand-receptor (periodontal-neural)",
"co... | 0.82 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.2668,
"diabetesRiskScore": 0.3257,
"inflammatoryLoadIndex": 0.3936
} | CCACACCAAAACCCCTCCTGCAAACAGGAGGGGTTTCACGTTGATTCATATTCACTCTTACTCCCACTCAATCGTGGCTGGTGGCTTGCTGGTGCAGTCGTAGAAGACGCGGTTGATGCCGCGGACTT | evo | 2026-06-30T02:08:13 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_3_000013 | ChineseAnchoredMicrobiomeRecord | syn_3_000013 | CN_mock_Porphyromonas_gingivalis_0000 | CM177833.1 | 0.252913 | {
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"Tannerella":... | [
{
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},
{
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"name": "Peptidoglycan biosynthesis",
"confidence": 0.7883
},
{
"id": "ko04080",
"name": "Neuroactive ligand-receptor (periodontal-neural)",
"confidence": 0.7577
}
] | 0.1568 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.1967,
"diabetesRiskScore": 0.6465,
"inflammatoryLoadIndex": 0.0752
} | TCGCAGGGATGCCCTTTTTTCTTGCATAAAAAAAGCACCGCATCGGCGGCGCTTCTTTTTATCTATTAAAAAATCAATGCTTTTTCTTACGCTTTTTCTTGTATTCGTATTTTTTTTGTTTTTTTTCT | evo | 2026-06-25T09:06:45 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_3_000117 | ChineseAnchoredMicrobiomeRecord | syn_3_000117 | CN_mock_Rothia_mucilaginosa_0007 | NZ_ADOB02000047.1 | 0.192007 | {
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"Tannerella"... | [
{
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{
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"name": "Peptidoglycan biosynthesis",
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},
{
"id": "ko00195",
"name": "Photosynthesis (nitrate reduction proxy)",
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{
"id... | 0.3 | {
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"cardiovascularRiskScore": 0.0972,
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} | CAGAAAAAAAGATAAACACCGAATTACTGCGCGCCGCCCTGGCGGCCCGCTTCCACGACCCCAACCACCGCTGGACCCTGGCGCTGGCCTGCGAACACGAACGCATGTCGCTGTTCTTCTTCCTGTGC | evo | 2026-06-25T09:31:20 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_3_000222 | ChineseAnchoredMicrobiomeRecord | syn_3_000222 | CN_mock_Eikenella_corrodens_0014 | MW600379.1 | 0.155899 | {
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"Tannerella"... | [
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},
{
"id": "ko05132",
"name": "Salmonella infection (inflammatory axis)",
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},
... | 0.3 | {
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} | CGGCTCGCTCTCACCATTCTCGGTCGCTGTAACCTCTGTTGGCCTTGTCGCCCCGGCACTCGACCGAACCCGGCATCCACTGTTCTCGCTGGATCTCATTCGACACCAGTCTCGACCGTTCTCCGACC | evo | 2026-06-25T09:56:09 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_3_000327 | ChineseAnchoredMicrobiomeRecord | syn_3_000327 | CN_mock_Treponema_denticola_0021 | NZ_CP072347.1 | 0.177539 | {
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"Tannerell... | [
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},
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},
{
"id": "ko04080",
"name": "Neuroactive ligand-receptor (periodontal-neural)",
"co... | 0.3 | {
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} | AAAGCACCCACTTTCGTGGGCGTTTTTTTGTTTTTTTTTCACCTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | evo | 2026-06-25T10:20:57 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_3_000431 | ChineseAnchoredMicrobiomeRecord | syn_3_000431 | CN_mock_Campylobacter_rectus_0028 | NZ_JASPFF010000102.1 | 0.209646 | {
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"Tannerella":... | [
{
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},
{
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},
{
"id": "ko05130",
"name": "Pathogenic Escherichia coli infection (oral pathobiont)",
"confiden... | 0.3 | {
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} | CTCCACTTCCAGCGGTTTTTTGTCATTTTTTTCTTCCTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTAATAAATATTAAATAAAAAAAATAAAAAAAAAAA | evo | 2026-06-25T10:45:35 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_4_000052 | ChineseAnchoredMicrobiomeRecord | syn_4_000052 | CN_mock_Streptococcus_mutans_0003 | PQ222948.1 | 0.258773 | {
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"Tannerella"... | [
{
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},
{
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},
{
"id": "ko00010",
"name": "Glycolysis / Gluconeogenesis",
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},
{
"id": "ko0019... | 0.3 | {
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"cardiovascularRiskScore": 0.2536,
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} | CCGGGCGGCCATCCCACGATGCTCCACCCTGTCGTTGCTCCTCCCCGGCCTTACACCCCCGACCGTTCCCCGTTGCAGGCTGCTTCATTGTCAGTCTGGATCGGCTTCACACCTCACACTCTCGGATC | evo | 2026-06-25T09:32:12 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_4_000156 | ChineseAnchoredMicrobiomeRecord | syn_4_000156 | CN_mock_Capnocytophaga_gingivalis_0010 | NZ_AGBV01000002.1 | 0.304209 | {
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"Tannere... | [
{
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},
{
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"name": "Photosynthesis (nitrate reduction proxy)",
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},
{
"id": "ko05132",
"name": "Salmonella infection (inflammatory axis)",
"co... | 0.3 | {
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} | TATTTTTTTTCTTTTTTTTGCTTAAAAATAAAAAAATAAAAAAATAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | evo | 2026-06-25T09:58:11 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_4_000261 | ChineseAnchoredMicrobiomeRecord | syn_4_000261 | CN_mock_Prevotella_intermedia_0017 | NZ_JAJHPH010000025.1 | 0.318559 | {
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"Tannerella"... | [
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},
{
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},
{
"id": "ko00195",
"name": "Photosynthesis (nitrate reduction proxy)",
"confidence": 0.90... | 0.3 | {
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"cardiovascularRiskScore": 0.3371,
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} | CTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | evo | 2026-06-25T10:24:28 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_4_000366 | ChineseAnchoredMicrobiomeRecord | syn_4_000366 | CN_mock_Leptotrichia_buccalis_0015 | NZ_CP084142.1 | 0.323321 | {
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"Tannerel... | [
{
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},
{
"id": "ko00020",
"name": "Citrate cycle (TCA cycle)",
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},
{
"id": "ko00550",
"name": "Peptidoglycan biosynthesis",
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},... | 0.3 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.1986,
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} | CATCATCTTTTATTTTTAATAAAAAAATAAAAAAATAAAAAAAGAAAAAAAAGAAAAAAAAGAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | evo | 2026-06-30T01:40:56 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_4_000470 | ChineseAnchoredMicrobiomeRecord | syn_4_000470 | CN_mock_Leptotrichia_buccalis_0015 | NZ_JASPFF010000106.1 | 0.216197 | {
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"Tannerella":... | [
{
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},
{
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},
{
"id": "ko00550",
"name": "Peptidoglycan biosynthesis",
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},... | 0.3 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.3371,
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} | CAACCATAAGGGGCTGCTCCTGCGTCTCCTGCGCAGGCCCAAGTCCCATCTCACCATCGCGGAAATCGCCGAGAAGTCCGCCGTTTCAGAGCAGACCGTCAAGCGCGACCTGGCCCGGCTGGCCGAGG | evo | 2026-06-30T02:05:21 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_5_000091 | ChineseAnchoredMicrobiomeRecord | syn_5_000091 | CN_mock_Aggregatibacter_actinomycetemcomitans_0006 | PZ117463.1 | 0.166365 | {
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"Tannerella": ... | [
{
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},
{
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"name": "Salmonella infection (inflammatory axis)",
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},
{
"id": "ko05130",
"name": "Pathogenic Escherichia coli infection (oral pathobiont)",
"confidence... | 0.3 | {
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} | CCGCGCCTCGATCATCTTCCGCCGTTTCCATTCACGCTTTTTTTTTCTTTTTTTTCTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | evo | 2026-06-25T09:26:40 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_5_000196 | ChineseAnchoredMicrobiomeRecord | syn_5_000196 | CN_mock_Neisseria_subflava_0013 | CEWRZC010000103.1 | 0.210721 | {
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"Tannerel... | [
{
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},
{
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"name": "Pathogenic Escherichia coli infection (oral pathobiont)",
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},
{
"id": "ko00010",
"name": "Glycolysis / Gluconeogenesis",
"... | 0.3 | {
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"cardiovascularRiskScore": 0.3371,
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} | TTAAATATATTATTATATAATATTAAAATATATTATAATATATAAATAAAAAAATAAAAAAATAAAAAAATAAAAAAATAAAAAAATAAAAAAATAAAAAAATAAAAAAATAAAAAAATATAAAAAAT | evo | 2026-06-25T09:53:07 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_5_000300 | ChineseAnchoredMicrobiomeRecord | syn_5_000300 | CN_mock_Eikenella_corrodens_0014 | NZ_CP084111.1 | 0.304543 | {
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"Tannerel... | [
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},
{
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},
{
"id": "ko05132",
"name": "Salmonella infection (inflammatory axis)",
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},
... | 0.3 | {
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} | AGCGCCAGCCCGCCCAGCAGCATCAGCCACAGCGGCACGGCGGGCAGGCCGGGCGCGGCGGGCGCGGCGGCGGGCGCGGCGGCGGGCGCGGCAGCGGCGGCAGCGGCAGCGGCGGCGGCGGCGGCGAT | evo | 2026-06-30T01:19:44 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_5_000405 | ChineseAnchoredMicrobiomeRecord | syn_5_000405 | CN_mock_Eikenella_corrodens_0014 | NZ_JASPFF010000102.1 | 0.296338 | {
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"Tannerella... | [
{
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},
{
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},
{
"id": "ko05132",
"name": "Salmonella infection (inflammatory axis)",
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},
... | 0.3 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.3371,
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} | AGGGATAGCCCCGCCAGCAGGTAGAGCACGCCGTCGTTTGTCGCGGGGATTTCCGGCAGGTCAGCGGCCAGCGCGGGGGCGGCGACGAGGGCGGCGAGGGCGGCGACGGGCAGGTATTTCTCGGCGTT | evo | 2026-06-30T01:38:45 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_6_000025 | ChineseAnchoredMicrobiomeRecord | syn_6_000025 | CN_mock_Prevotella_intermedia_0001 | MW600379.1 | 0.243658 | {
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"Tannerella... | [
{
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},
{
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},
{
"id": "ko00020",
"name": "Citrate cycle (TCA cycle)",
"confidence": 0.7009
},
{... | 0.3 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.1266,
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} | GCAGAAATATTTTTAATAAATTTAAAAAAATAAAAAAAATATCAAAAAAAGACCACAAAAAAAGCCCTTAACGAGGCCGGATTTTTGAATTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | evo | 2026-06-25T09:42:27 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_6_000130 | ChineseAnchoredMicrobiomeRecord | syn_6_000130 | CN_mock_Veillonella_parvula_0008 | NZ_CP072347.1 | 0.230355 | {
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"Tannerell... | [
{
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},
{
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"name": "Citrate cycle (TCA cycle)",
"confidence": 0.6879
},
{
"id": "ko05130",
"name": "Pathogenic Escherichia coli infection (oral pathobiont)",
"confidence... | 0.3 | {
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"cardiovascularRiskScore": 0.1902,
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} | GCTTGGCTTTGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | evo | 2026-06-25T10:09:52 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_6_000235 | ChineseAnchoredMicrobiomeRecord | syn_6_000235 | CN_mock_Leptotrichia_buccalis_0015 | PZ213023.1 | 0.255869 | {
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"Veillonella": 0.0933314754183822,
"Tannerella":... | [
{
"id": "ko05130",
"name": "Pathogenic Escherichia coli infection (oral pathobiont)",
"confidence": 0.5736
},
{
"id": "ko00020",
"name": "Citrate cycle (TCA cycle)",
"confidence": 0.7149
},
{
"id": "ko00550",
"name": "Peptidoglycan biosynthesis",
"confidence": 0.6351
},... | 0.3 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.1266,
"diabetesRiskScore": 0.0788,
"inflammatoryLoadIndex": 0.144
} | CGTCTTCGGACTCCTCCTTTTCTTCGCTTTTTTTATTCTTATTTTTTTCTTTTTTTTCTTTTTTTTCTTTTTCTTTTTCTTTTTTTTCTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | evo | 2026-06-25T10:37:17 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_6_000339 | ChineseAnchoredMicrobiomeRecord | syn_6_000339 | CN_mock_Neisseria_subflava_0013 | PQ222948.1 | 0.173718 | {
"Porphyromonas": 0.10428186037433174,
"Prevotella": 0.16208423430998478,
"Streptococcus": 0.17371847638058505,
"Fusobacterium": 0.10379208554100999,
"Rothia": 0.1394022511515891,
"Actinomyces": 0.14641548765249116,
"Lactobacillus": 0.023043206393095064,
"Veillonella": 0.08571634460887734,
"Tannerell... | [
{
"id": "ko04080",
"name": "Neuroactive ligand-receptor (periodontal-neural)",
"confidence": 0.737
},
{
"id": "ko05130",
"name": "Pathogenic Escherichia coli infection (oral pathobiont)",
"confidence": 0.8462
},
{
"id": "ko00010",
"name": "Glycolysis / Gluconeogenesis",
"... | 0.3 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.2299,
"diabetesRiskScore": 0.3114,
"inflammatoryLoadIndex": 0.144
} | AGGAATGGAAAACATAGAATGATAGATACCTGATATGTTGATGATGTTGGAATATCATAGAATAATAGATTCCACTTTGTTGAAAATGACACTGATGGAATATCAGAAGATATTGATGATATGGAATT | evo | 2026-06-30T01:37:31 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_6_000444 | ChineseAnchoredMicrobiomeRecord | syn_6_000444 | CN_mock_Neisseria_subflava_0013 | NZ_JBZEMO010000022.1 | 0.200022 | {
"Porphyromonas": 0.06665863057945247,
"Prevotella": 0.17172007888353003,
"Streptococcus": 0.20002182346415537,
"Fusobacterium": 0.07778027805772497,
"Rothia": 0.1050307745764245,
"Actinomyces": 0.1568018518471808,
"Lactobacillus": 0.07012354282355365,
"Veillonella": 0.09889465743565788,
"Tannerella"... | [
{
"id": "ko04080",
"name": "Neuroactive ligand-receptor (periodontal-neural)",
"confidence": 0.737
},
{
"id": "ko05130",
"name": "Pathogenic Escherichia coli infection (oral pathobiont)",
"confidence": 0.8462
},
{
"id": "ko00010",
"name": "Glycolysis / Gluconeogenesis",
"... | 0.58 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.2727,
"diabetesRiskScore": 0.1138,
"inflammatoryLoadIndex": 0.2784
} | TTTTTTTATTTTTTATTATTTTTATTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | evo | 2026-06-30T02:02:01 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_7_000065 | ChineseAnchoredMicrobiomeRecord | syn_7_000065 | CN_mock_Tannerella_forsythia_0004 | NZ_AGBV01000001.1 | 0.217468 | {
"Porphyromonas": 0.07478180707156772,
"Prevotella": 0.17886439578228208,
"Streptococcus": 0.21746761848080182,
"Fusobacterium": 0.09083800956882303,
"Rothia": 0.11004188375591399,
"Actinomyces": 0.15596775283323208,
"Lactobacillus": 0.03140438328306109,
"Veillonella": 0.06986061191800609,
"Tannerell... | [
{
"id": "ko02020",
"name": "Two-component regulatory system",
"confidence": 0.6586
},
{
"id": "ko00010",
"name": "Glycolysis / Gluconeogenesis",
"confidence": 0.6405
},
{
"id": "ko00195",
"name": "Photosynthesis (nitrate reduction proxy)",
"confidence": 0.7626
}
] | 0.3 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.2299,
"diabetesRiskScore": 0.3114,
"inflammatoryLoadIndex": 0.144
} | CTGCGCCCGCCTTGGCCTTATTTAAAAACAGAAAAATGAAAATAGAGTAGAGCATCAAAAAATATGTCATAACCAAACTATTTTTTATTATTTTTTATTTTTTTATTATTTTTTATTTTTTTTTATTT | evo | 2026-06-25T09:33:06 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_7_000169 | ChineseAnchoredMicrobiomeRecord | syn_7_000169 | CN_mock_Actinomyces_naeslundii_0011 | NZ_CP084147.1 | 0.221152 | {
"Porphyromonas": 0.09947183247437233,
"Prevotella": 0.16109578472737157,
"Streptococcus": 0.2211521785085206,
"Fusobacterium": 0.04303991549518086,
"Rothia": 0.12691745823085707,
"Actinomyces": 0.16853706221496276,
"Lactobacillus": 0.07927639403855882,
"Veillonella": 0.04642061514150349,
"Tannerella... | [
{
"id": "ko00195",
"name": "Photosynthesis (nitrate reduction proxy)",
"confidence": 0.7394
},
{
"id": "ko05130",
"name": "Pathogenic Escherichia coli infection (oral pathobiont)",
"confidence": 0.9467
},
{
"id": "ko04080",
"name": "Neuroactive ligand-receptor (periodontal-ne... | 0.3 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.1475,
"diabetesRiskScore": 0.1072,
"inflammatoryLoadIndex": 0.144
} | GGGCTTAATCAAAAACAAAAAATCACCCACGATGGGCTAACACCAGACAGGGTTGAGATAAGGCAATCATGCGCCTTGAAAAAATGAGCTAATAAAAAATGATTTATATATTATTATTATTTTTTATT | evo | 2026-06-25T10:40:19 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_7_000274 | ChineseAnchoredMicrobiomeRecord | syn_7_000274 | CN_mock_Leptotrichia_buccalis_0015 | NZ_JBZEMO010000023.1 | 0.165508 | {
"Porphyromonas": 0.11696691506275915,
"Prevotella": 0.14215910002800333,
"Streptococcus": 0.1655079905405603,
"Fusobacterium": 0.06853460799684134,
"Rothia": 0.12561465542711597,
"Actinomyces": 0.11899350812885696,
"Lactobacillus": 0.07231170790331783,
"Veillonella": 0.07926476303693525,
"Tannerella... | [
{
"id": "ko05130",
"name": "Pathogenic Escherichia coli infection (oral pathobiont)",
"confidence": 0.5736
},
{
"id": "ko00020",
"name": "Citrate cycle (TCA cycle)",
"confidence": 0.7149
},
{
"id": "ko00550",
"name": "Peptidoglycan biosynthesis",
"confidence": 0.6351
},... | 0.3 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.3371,
"diabetesRiskScore": 0.2069,
"inflammatoryLoadIndex": 0.144
} | GCAAAAACGAGCACGGGTCGAGCGGATGCTGAGCCTGCTGGCCTACCAGAAGGGCGAGAACATCGCCACCCTGCCCAAGCTGGCCGAGGAGCTGGGCGTGAACGTCACCGCCCTGCTGCACGAGCTGC | evo | 2026-06-30T01:21:45 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_7_000378 | ChineseAnchoredMicrobiomeRecord | syn_7_000378 | CN_mock_Porphyromonas_gingivalis_0016 | PZ117463.1 | 0.283849 | {
"Porphyromonas": 0.02718436949942582,
"Prevotella": 0.28384898528444785,
"Streptococcus": 0.15172464149354425,
"Fusobacterium": 0.05294033452335209,
"Rothia": 0.09075622836262702,
"Actinomyces": 0.119070669743907,
"Lactobacillus": 0.04344781893395608,
"Veillonella": 0.18980890929689995,
"Tannerella"... | [
{
"id": "ko05130",
"name": "Pathogenic Escherichia coli infection (oral pathobiont)",
"confidence": 0.6184
},
{
"id": "ko00020",
"name": "Citrate cycle (TCA cycle)",
"confidence": 0.8633
},
{
"id": "ko04080",
"name": "Neuroactive ligand-receptor (periodontal-neural)",
"co... | 0.3 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.3217,
"diabetesRiskScore": 0.1569,
"inflammatoryLoadIndex": 0.144
} | CTGTAAACACTAAAAAAGCCCCGCACCATGCGTCCACCGCCTTGCTCTCAAACGAAAAACACATGACACGGGCCACCGGCCCACACACAAAAACTTGAGACAGGGCATCATCCCTATCAAAAAACAAA | evo | 2026-06-30T01:40:44 | 2026-06-30T07:18:23 | true | v2026.06 |
{
"@vocab": "https://bio-factory.local/vocab/",
"schema": "https://schema.org/"
} | https://bio-factory.local/synthetic/syn_7_000483 | ChineseAnchoredMicrobiomeRecord | syn_7_000483 | CN_mock_Porphyromonas_gingivalis_0016 | NZ_WIJZ01000020.1 | 0.390928 | {
"Porphyromonas": 0.049556066806390485,
"Prevotella": 0.17064603500906636,
"Streptococcus": 0.3909276514581513,
"Fusobacterium": 0.04542625833553663,
"Rothia": 0.050909217944305356,
"Actinomyces": 0.14084572770168946,
"Lactobacillus": 0.03782870830683527,
"Veillonella": 0.06296622370980808,
"Tannerel... | [
{
"id": "ko05130",
"name": "Pathogenic Escherichia coli infection (oral pathobiont)",
"confidence": 0.6184
},
{
"id": "ko00020",
"name": "Citrate cycle (TCA cycle)",
"confidence": 0.8633
},
{
"id": "ko04080",
"name": "Neuroactive ligand-receptor (periodontal-neural)",
"co... | 0.3 | {
"@type": "SystemicRiskPrediction",
"cardiovascularRiskScore": 0.1695,
"diabetesRiskScore": 0.2988,
"inflammatoryLoadIndex": 0.144
} | TTTAGTTTTTCTTTTTCTTTCTTTTCTTTTTTTTTCTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT | evo | 2026-06-30T02:05:05 | 2026-06-30T07:18:23 | true | v2026.06 |
🦷 World's First Chinese-Anchored Oral Multi-Omics Synthetic Dataset (v2026)
3,872 production records · PERMANOVA p=0.994 · MMD=0.060 · 100% synthetic = zero GDPR risk
📄 Full Whitepaper · 📋 1-Page Executive Summary · 🔬 38-Sample Preview · 📧 Enterprise: jerry820402@hotmail.com
English Executive Summary
This is the world's first Asian/Chinese-specific oral microbiome multi-omics synthetic dataset, generated via Evo foundation model inference on 8× NVIDIA A800 DDP. Each record links genomic sequence + 10-taxon abundance profile + clinical triplet (periodontal / cardiovascular / diabetes).
After Cyclic Dirichlet manifold calibration, the full 3,872-record cohort passed enterprise B2B audit: PERMANOVA p=0.994, MMD=0.060, clinical triplet p=0.415 — statistically indistinguishable from real Han-Chinese oral cohorts.
100% synthetic · zero natural persons · GDPR / cross-border clinical data exempt.
中文摘要
全球首个华人锚定口腔多组学全合成数据集，基于 8 卡 A800 + Evo 分布式推理，每条样本包含基因序列、菌群丰度、临床三元组标签。经 Cyclic Dirichlet 流形校准后，3872 条生产数据终局审计 OVERALL PASSED（PERMANOVA p=0.994，MMD=0.060）。100% 合成，零合规风险，面向药企 AI 训模与口腔器械智能化场景。
Audit Bulletin (Production-Verified)
| Audit Dimension | Method | Result | Status |
|---|---|---|---|
| Community Structure Fidelity | PERMANOVA | p = 0.994 | ✅ PASSED |
| High-Dimensional Manifold | MMD | 0.060 | ✅ PASSED |
| Clinical Triplet Distribution | PERMANOVA | p = 0.415 | ✅ PASSED |
| Alpha Diversity (Shannon) | Mann–Whitney U | p = 0.599 | ✅ PASSED |
| Mean Abundance Correlation | Spearman | r = 1.000 | ✅ PASSED |
Full production set: n=3,872 · Reference cohort: n=30 Han-Chinese clinical samples
Repository Files
| File | Description |
|---|---|
preview_dataset.jsonl |
38 stratified preview records (1% open-access sample) |
validate_preview.py |
Run PERMANOVA / MMD audit locally in ~30 seconds |
docs/Asian_Oral_Microbiome_Whitepaper_v2026.md |
Full technical & commercial whitepaper |
docs/Executive_OnePager_v2026.md |
1-page summary for BD / LinkedIn / email |
Quick Start (30 Seconds)
git clone https://huggingface.co/datasets/jerry982/BioFactory-Asian-Oral-Microbiome-Preview
cd BioFactory-Asian-Oral-Microbiome-Preview
python validate_preview.py
import json
with open("preview_dataset.jsonl") as f:
for line in f:
rec = json.loads(line)
print(rec["schema:identifier"], rec["abundanceIndex"], rec["periodontalCorrelation"])
Record Schema (Each JSON-L Line)
| Field | Description |
|---|---|
generatedSequence |
Evo-inferred nucleotide sequence |
abundanceProfile |
10-taxon CHOMD compositional vector (sums to 1.0) |
periodontalCorrelation |
Periodontal disease correlation index |
systemicRisk |
Cardiovascular / diabetes risk scores |
metabolicPathwayPrediction |
KEGG pathway predictions with confidence |
Full Commercial License
| Channel | Details |
|---|---|
| Snowflake Marketplace | Quarterly incremental drops / exclusive enterprise buyout |
| Direct License | Encrypted zip (3,872 records) + Validation_Report.json + MD5 |
Contact: jerry820402@hotmail.com
Citation
@dataset{biofactory_asian_oral_2026,
title={Asian Oral Microbiome Multi-Omics Synthetic Dataset (v2026)},
author={AI Bio-Data Factory Lab},
year={2026},
url={https://huggingface.co/datasets/jerry982/BioFactory-Asian-Oral-Microbiome-Preview}
}
Compliance
100% synthetic data — maps to zero natural persons — inherently exempt from GDPR and cross-border clinical genetic data restrictions.
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