Add files using upload-large-folder tool

pfam_gap_rates/2-Hacid_dh.gap.json

@@ -0,0 +1 @@
+{"family": "2-Hacid_dh", "n_seqs": 5000, "length": 337, "gap_rates": [0.7358, 0.647, 0.619, 0.608, 0.6048, 0.576, 0.5874, 0.4952, 0.4724, 0.4558, 0.4356, 0.4132, 0.378, 0.3578, 0.3416, 0.3302, 0.3168, 0.8944, 0.9194, 0.8676, 0.589, 0.4686, 0.3418, 0.7526, 0.2536, 0.2438, 0.2374, 0.2334, 0.2246, 0.2158, 0.728, 0.845, 0.6062, 0.1976, 0.1846, 0.168, 0.1616, 0.1544, 0.1534, 0.1394, 0.1186, 0.1016, 0.097, 0.0866, 0.0754, 0.0696, 0.9366, 0.0622, 0.0572, 0.055, 0.0536, 0.0518, 0.05, 0.0486, 0.0462, 0.0524, 0.0548, 0.9384, 0.9064, 0.3212, 0.0534, 0.0498, 0.0328, 0.031, 0.028, 0.0232, 0.0226, 0.027, 0.0576, 0.888, 0.7576, 0.0252, 0.0092, 0.0088, 0.0082, 0.0074, 0.0068, 0.0068, 0.0072, 0.0052, 0.0052, 0.0048, 0.007, 0.0048, 0.0048, 0.004, 0.0038, 0.006, 0.0058, 0.0036, 0.0034, 0.0036, 0.0046, 0.0054, 0.0046, 0.0128, 0.0048, 0.0052, 0.0052, 0.005, 0.0054, 0.0058, 0.006, 0.0278, 0.0096, 0.0088, 0.0096, 0.018, 0.0106, 0.0104, 0.01, 0.0106, 0.0112, 0.0122, 0.0232, 0.0232, 0.0238, 0.0238, 0.024, 0.0242, 0.025, 0.0258, 0.0268, 0.0272, 0.0278, 0.0284, 0.0288, 0.029, 0.0294, 0.0298, 0.0302, 0.0304, 0.0316, 0.0316, 0.0318, 0.0322, 0.0324, 0.033, 0.0332, 0.0336, 0.0344, 0.0346, 0.035, 0.0354, 0.036, 0.0364, 0.0366, 0.0384, 0.0396, 0.0406, 0.041, 0.0412, 0.0412, 0.0424, 0.0434, 0.0442, 0.0444, 0.0446, 0.0456, 0.046, 0.0474, 0.0488, 0.0506, 0.0514, 0.0528, 0.0532, 0.0544, 0.0548, 0.0558, 0.0562, 0.0566, 0.0568, 0.0576, 0.0584, 0.059, 0.0598, 0.0612, 0.0622, 0.0626, 0.0632, 0.0636, 0.065, 0.0662, 0.0664, 0.0666, 0.0672, 0.0678, 0.0682, 0.069, 0.0706, 0.0726, 0.0756, 0.0862, 0.0892, 0.0944, 0.105, 0.1076, 0.1136, 0.1184, 0.1274, 0.1768, 0.3212, 0.4262, 0.5838, 0.7176, 0.7896, 0.8414, 0.8894, 0.9414, 0.9474, 0.9244, 0.8644, 0.8038, 0.7608, 0.6758, 0.5236, 0.3876, 0.2178, 0.1422, 0.122, 0.116, 0.1108, 0.1064, 0.0968, 0.092, 0.0878, 0.0782, 0.074, 0.0714, 0.0696, 0.0686, 0.068, 0.0674, 0.067, 0.0666, 0.0662, 0.066, 0.0648, 0.0634, 0.0628, 0.0626, 0.0618, 0.061, 0.0596, 0.0584, 0.058, 0.0568, 0.0568, 0.0566, 0.0562, 0.0552, 0.0546, 0.0536, 0.0528, 0.052, 0.051, 0.0506, 0.0484, 0.0466, 0.0458, 0.0454, 0.0446, 0.0442, 0.0436, 0.0428, 0.0414, 0.0412, 0.0412, 0.0408, 0.0406, 0.0388, 0.038, 0.0366, 0.0362, 0.0356, 0.0354, 0.0348, 0.0346, 0.0336, 0.0334, 0.0332, 0.0328, 0.0324, 0.0318, 0.0316, 0.0316, 0.0312, 0.0304, 0.0302, 0.0296, 0.0292, 0.0288, 0.0286, 0.028, 0.0276, 0.027, 0.0266, 0.0252, 0.025, 0.024, 0.024, 0.0238, 0.0234, 0.0232, 0.0224, 0.0186, 0.0626, 0.064, 0.0644, 0.064, 0.0642, 0.0656, 0.0654, 0.0658, 0.0658, 0.0666, 0.0686, 0.0686, 0.0698, 0.0716, 0.0746, 0.0774, 0.081, 0.0842, 0.0904, 0.1008, 0.1146, 0.1372, 0.1572, 0.257, 0.2182, 0.2548, 0.2844, 0.309, 0.3528, 0.4054, 0.6358], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/2OG-FeII_Oxy_4.gap.json

@@ -0,0 +1 @@
+{"family": "2OG-FeII_Oxy_4", "n_seqs": 288, "length": 149, "gap_rates": [0.4652777777777778, 0.2673611111111111, 0.18055555555555555, 0.11805555555555555, 0.1111111111111111, 0.1076388888888889, 0.10069444444444445, 0.09722222222222222, 0.08680555555555555, 0.0798611111111111, 0.0798611111111111, 0.0798611111111111, 0.07291666666666667, 0.07291666666666667, 0.07291666666666667, 0.07291666666666667, 0.06944444444444445, 0.06944444444444445, 0.6909722222222222, 0.11458333333333333, 0.9444444444444444, 0.05555555555555555, 0.04513888888888889, 0.03819444444444445, 0.052083333333333336, 0.1388888888888889, 0.034722222222222224, 0.034722222222222224, 0.034722222222222224, 0.034722222222222224, 0.034722222222222224, 0.03125, 0.03125, 0.5, 0.8888888888888888, 0.5069444444444444, 0.4305555555555556, 0.024305555555555556, 0.010416666666666666, 0.013888888888888888, 0.017361111111111112, 0.013888888888888888, 0.006944444444444444, 0.006944444444444444, 0.006944444444444444, 0.010416666666666666, 0.010416666666666666, 0.010416666666666666, 0.6944444444444444, 0.013888888888888888, 0.017361111111111112, 0.013888888888888888, 0.8229166666666666, 0.8368055555555556, 0.9340277777777778, 0.8715277777777778, 0.8333333333333334, 0.8194444444444444, 0.017361111111111112, 0.13194444444444445, 0.1076388888888889, 0.6631944444444444, 0.7430555555555556, 0.9375, 0.8333333333333334, 0.7152777777777778, 0.625, 0.04513888888888889, 0.5173611111111112, 0.5590277777777778, 0.7152777777777778, 0.7777777777777778, 0.8784722222222222, 0.9027777777777778, 0.8645833333333334, 0.7465277777777778, 0.6701388888888888, 0.5243055555555556, 0.5069444444444444, 0.04513888888888889, 0.052083333333333336, 0.9097222222222222, 0.9131944444444444, 0.9305555555555556, 0.9166666666666666, 0.9131944444444444, 0.8958333333333334, 0.0625, 0.04861111111111111, 0.03819444444444445, 0.041666666666666664, 0.041666666666666664, 0.03819444444444445, 0.03819444444444445, 0.041666666666666664, 0.03819444444444445, 0.03819444444444445, 0.03819444444444445, 0.034722222222222224, 0.034722222222222224, 0.034722222222222224, 0.03125, 0.03125, 0.7743055555555556, 0.04513888888888889, 0.041666666666666664, 0.041666666666666664, 0.6180555555555556, 0.6805555555555556, 0.3506944444444444, 0.03819444444444445, 0.05555555555555555, 0.06597222222222222, 0.06597222222222222, 0.06944444444444445, 0.0798611111111111, 0.08333333333333333, 0.8576388888888888, 0.1388888888888889, 0.7291666666666666, 0.8125, 0.8402777777777778, 0.875, 0.9131944444444444, 0.8472222222222222, 0.8333333333333334, 0.7708333333333334, 0.7291666666666666, 0.3194444444444444, 0.1423611111111111, 0.10069444444444445, 0.1111111111111111, 0.09027777777777778, 0.9479166666666666, 0.9479166666666666, 0.9479166666666666, 0.9479166666666666, 0.9479166666666666, 0.9479166666666666, 0.9479166666666666, 0.09375, 0.09375, 0.10069444444444445, 0.10069444444444445, 0.10069444444444445, 0.1076388888888889, 0.1111111111111111, 0.11805555555555555, 0.23958333333333334], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/2TM.gap.json

@@ -0,0 +1 @@
+{"family": "2TM", "n_seqs": 307, "length": 92, "gap_rates": [0.7850162866449512, 0.4788273615635179, 0.31596091205211724, 0.2703583061889251, 0.1758957654723127, 0.1465798045602606, 0.13029315960912052, 0.08794788273615635, 0.05863192182410423, 0.05863192182410423, 0.05211726384364821, 0.035830618892508145, 0.029315960912052116, 0.026058631921824105, 0.016286644951140065, 0.006514657980456026, 0.006514657980456026, 0.003257328990228013, 0.003257328990228013, 0.003257328990228013, 0.003257328990228013, 0.003257328990228013, 0.003257328990228013, 0.003257328990228013, 0.003257328990228013, 0.003257328990228013, 0.003257328990228013, 0.003257328990228013, 0.003257328990228013, 0.009771986970684038, 0.9315960912052117, 0.009771986970684038, 0.013029315960912053, 0.04234527687296417, 0.21172638436482086, 0.7915309446254072, 0.8501628664495114, 0.9153094462540716, 0.9250814332247557, 0.8859934853420195, 0.8273615635179153, 0.7296416938110749, 0.08143322475570032, 0.019543973941368076, 0.009771986970684038, 0.019543973941368076, 0.009771986970684038, 0.006514657980456026, 0.013029315960912053, 0.009771986970684038, 0.006514657980456026, 0.006514657980456026, 0.006514657980456026, 0.006514657980456026, 0.003257328990228013, 0.003257328990228013, 0.003257328990228013, 0.003257328990228013, 0.003257328990228013, 0.003257328990228013, 0.003257328990228013, 0.003257328990228013, 0.006514657980456026, 0.006514657980456026, 0.013029315960912053, 0.02280130293159609, 0.048859934853420196, 0.08469055374592833, 0.11726384364820847, 0.2768729641693811, 0.8208469055374593, 0.8175895765472313, 0.30944625407166126, 0.3257328990228013, 0.30944625407166126, 0.30618892508143325, 0.30293159609120524, 0.3289902280130293, 0.8273615635179153, 0.7980456026058632, 0.3257328990228013, 0.3322475570032573, 0.3355048859934853, 0.34201954397394135, 0.3550488599348534, 0.3745928338762215, 0.38436482084690554, 0.42996742671009774, 0.46254071661237783, 0.5244299674267101, 0.5537459283387622, 0.749185667752443], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/3D.gap.json

@@ -0,0 +1 @@
+{"family": "3D", "n_seqs": 1258, "length": 82, "gap_rates": [0.4642289348171701, 0.1327503974562798, 0.03577106518282989, 0.017488076311605722, 0.016693163751987282, 0.016693163751987282, 0.013513513513513514, 0.013513513513513514, 0.037360890302066775, 0.00397456279809221, 0.003179650238473768, 0.0023847376788553257, 0.0023847376788553257, 0.0023847376788553257, 0.0023847376788553257, 0.0023847376788553257, 0.0023847376788553257, 0.0023847376788553257, 0.0023847376788553257, 0.0023847376788553257, 0.7551669316375199, 0.8163751987281399, 0.6875993640699523, 0.6812400635930048, 0.7273449920508744, 0.6550079491255962, 0.9062003179650239, 0.8243243243243243, 0.5794912559618441, 0.5620031796502385, 0.8918918918918919, 0.9062003179650239, 0.8775834658187599, 0.541335453100159, 0.5317965023847376, 0.5, 0.04689984101748808, 0.003179650238473768, 0.0023847376788553257, 0.003179650238473768, 0.000794912559618442, 0.0, 0.0, 0.0, 0.0, 0.0, 0.005564387917329093, 0.009538950715421303, 0.001589825119236884, 0.001589825119236884, 0.001589825119236884, 0.001589825119236884, 0.651033386327504, 0.001589825119236884, 0.001589825119236884, 0.001589825119236884, 0.0023847376788553257, 0.006359300476947536, 0.0047694753577106515, 0.007154213036565978, 0.016693163751987282, 0.014308426073131956, 0.014308426073131956, 0.022257551669316374, 0.026232114467408585, 0.028616852146263912, 0.03418124006359301, 0.5516693163751988, 0.04292527821939587, 0.04133545310015898, 0.6073131955484896, 0.5747217806041336, 0.04769475357710652, 0.05246422893481717, 0.058823529411764705, 0.06836248012718601, 0.075516693163752, 0.08187599364069953, 0.1041335453100159, 0.13195548489666137, 0.20508744038155802, 0.8410174880763116], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/5TM-5TMR_LYT.gap.json

@@ -0,0 +1 @@
+{"family": "5TM-5TMR_LYT", "n_seqs": 577, "length": 192, "gap_rates": [0.6516464471403813, 0.5545927209705372, 0.5077989601386482, 0.48700173310225303, 0.4679376083188908, 0.44714038128249567, 0.4072790294627383, 0.7383015597920277, 0.35008665511265163, 0.3223570190641248, 0.2772963604852686, 0.24783362218370883, 0.9358752166377816, 0.17157712305025996, 0.14558058925476602, 0.12131715771230503, 0.10398613518197573, 0.06412478336221837, 0.05545927209705372, 0.043327556325823226, 0.03986135181975736, 0.03292894280762565, 0.025996533795493933, 0.02772963604852686, 0.02772963604852686, 0.02772963604852686, 0.024263431542461005, 0.022530329289428077, 0.022530329289428077, 0.025996533795493933, 0.022530329289428077, 0.022530329289428077, 0.022530329289428077, 0.02079722703639515, 0.019064124783362217, 0.019064124783362217, 0.019064124783362217, 0.019064124783362217, 0.019064124783362217, 0.019064124783362217, 0.8162911611785095, 0.8318890814558059, 0.8353552859618717, 0.8353552859618717, 0.8370883882149047, 0.8422876949740035, 0.8457538994800693, 0.8492201039861352, 0.8457538994800693, 0.8440207972270364, 0.8388214904679376, 0.8353552859618717, 0.8353552859618717, 0.8318890814558059, 0.82842287694974, 0.5285961871750433, 0.01559792027729636, 0.8752166377816292, 0.01559792027729636, 0.01559792027729636, 0.01559792027729636, 0.01559792027729636, 0.01559792027729636, 0.01559792027729636, 0.01559792027729636, 0.01559792027729636, 0.01559792027729636, 0.01559792027729636, 0.012131715771230503, 0.012131715771230503, 0.012131715771230503, 0.010398613518197574, 0.010398613518197574, 0.008665511265164644, 0.008665511265164644, 0.008665511265164644, 0.010398613518197574, 0.006932409012131715, 0.006932409012131715, 0.006932409012131715, 0.008665511265164644, 0.006932409012131715, 0.006932409012131715, 0.006932409012131715, 0.006932409012131715, 0.006932409012131715, 0.006932409012131715, 0.006932409012131715, 0.008665511265164644, 0.008665511265164644, 0.008665511265164644, 0.006932409012131715, 0.01386481802426343, 0.8648180242634316, 0.8422876949740035, 0.008665511265164644, 0.012131715771230503, 0.008665511265164644, 0.9358752166377816, 0.902946273830156, 0.1923743500866551, 0.01559792027729636, 0.008665511265164644, 0.008665511265164644, 0.01386481802426343, 0.008665511265164644, 0.006932409012131715, 0.005199306759098787, 0.005199306759098787, 0.005199306759098787, 0.0034662045060658577, 0.010398613518197574, 0.006932409012131715, 0.006932409012131715, 0.005199306759098787, 0.005199306759098787, 0.008665511265164644, 0.006932409012131715, 0.005199306759098787, 0.0034662045060658577, 0.029462738301559793, 0.025996533795493933, 0.01559792027729636, 0.01386481802426343, 0.022530329289428077, 0.1559792027729636, 0.4003466204506066, 0.45233968804159447, 0.8180242634315424, 0.8596187175043327, 0.6845753899480069, 0.05199306759098787, 0.02772963604852686, 0.01733102253032929, 0.012131715771230503, 0.012131715771230503, 0.01386481802426343, 0.01559792027729636, 0.01559792027729636, 0.01559792027729636, 0.01733102253032929, 0.01733102253032929, 0.025996533795493933, 0.025996533795493933, 0.029462738301559793, 0.06759098786828423, 0.06412478336221837, 0.08492201039861352, 0.24610051993067592, 0.21837088388214904, 0.10398613518197573, 0.08145580589254767, 0.06932409012131716, 0.0658578856152513, 0.06412478336221837, 0.060658578856152515, 0.06759098786828423, 0.0779896013864818, 0.14731369150779897, 0.1265164644714038, 0.12305025996533796, 0.09532062391681109, 0.09185441941074524, 0.08665511265164645, 0.09012131715771231, 0.08492201039861352, 0.09185441941074524, 0.15251299826689774, 0.14038128249566725, 0.11438474870017332, 0.11785095320623917, 0.11265164644714037, 0.13344887348353554, 0.12824956672443674, 0.12131715771230503, 0.14558058925476602, 0.1265164644714038, 0.12478336221837089, 0.14731369150779897, 0.13518197573656845, 0.1386481802426343, 0.15251299826689774, 0.15251299826689774, 0.15771230502599654, 0.1681109185441941, 0.1733102253032929, 0.18024263431542462, 0.21317157712305027, 0.24263431542461006, 0.29809358752166376, 0.3882149046793761, 0.5805892547660312], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/60KD_IMP.gap.json

@@ -0,0 +1 @@
+{"family": "60KD_IMP", "n_seqs": 3168, "length": 315, "gap_rates": [0.26136363636363635, 0.0928030303030303, 0.06912878787878787, 0.06439393939393939, 0.0625, 0.059343434343434344, 0.05744949494949495, 0.054924242424242424, 0.05334595959595959, 0.05334595959595959, 0.05303030303030303, 0.052714646464646464, 0.05176767676767677, 0.05176767676767677, 0.05176767676767677, 0.05113636363636364, 0.05082070707070707, 0.05082070707070707, 0.050505050505050504, 0.050505050505050504, 0.04924242424242424, 0.04955808080808081, 0.04955808080808081, 0.04892676767676768, 0.04861111111111111, 0.048295454545454544, 0.047979797979797977, 0.047979797979797977, 0.04640151515151515, 0.043876262626262624, 0.043560606060606064, 0.04292929292929293, 0.039457070707070704, 0.039141414141414144, 0.038825757575757576, 0.03787878787878788, 0.03819444444444445, 0.03787878787878788, 0.03819444444444445, 0.03787878787878788, 0.03819444444444445, 0.03819444444444445, 0.03851010101010101, 0.03756313131313131, 0.05303030303030303, 0.6717171717171717, 0.7515782828282829, 0.9024621212121212, 0.9409722222222222, 0.9296085858585859, 0.8112373737373737, 0.7219065656565656, 0.6543560606060606, 0.03787878787878788, 0.09090909090909091, 0.9422348484848485, 0.041351010101010104, 0.8873106060606061, 0.9160353535353535, 0.8642676767676768, 0.03598484848484849, 0.03314393939393939, 0.029356060606060608, 0.027777777777777776, 0.026515151515151516, 0.026515151515151516, 0.026199494949494948, 0.025252525252525252, 0.024305555555555556, 0.024936868686868688, 0.02462121212121212, 0.02556818181818182, 0.025252525252525252, 0.024936868686868688, 0.025252525252525252, 0.041035353535353536, 0.024936868686868688, 0.028409090909090908, 0.026199494949494948, 0.03566919191919192, 0.9378156565656566, 0.024305555555555556, 0.027777777777777776, 0.025883838383838384, 0.02556818181818182, 0.030618686868686868, 0.027146464646464648, 0.02335858585858586, 0.019255050505050504, 0.019255050505050504, 0.019255050505050504, 0.01893939393939394, 0.019255050505050504, 0.019255050505050504, 0.019255050505050504, 0.019570707070707072, 0.019255050505050504, 0.019255050505050504, 0.01893939393939394, 0.019255050505050504, 0.019255050505050504, 0.019570707070707072, 0.03377525252525253, 0.02904040404040404, 0.15214646464646464, 0.16445707070707072, 0.4494949494949495, 0.5306186868686869, 0.5899621212121212, 0.6770833333333334, 0.6950757575757576, 0.7228535353535354, 0.7408459595959596, 0.7692550505050505, 0.8210227272727273, 0.8428030303030303, 0.8563762626262627, 0.8683712121212122, 0.8948863636363636, 0.9002525252525253, 0.9068813131313131, 0.9201388888888888, 0.9255050505050505, 0.9296085858585859, 0.9311868686868687, 0.9346590909090909, 0.9362373737373737, 0.9397095959595959, 0.9431818181818182, 0.9441287878787878, 0.9463383838383839, 0.9479166666666666, 0.9494949494949495, 0.9485479797979798, 0.9479166666666666, 0.9444444444444444, 0.9434974747474747, 0.9425505050505051, 0.9378156565656566, 0.9352904040404041, 0.9337121212121212, 0.9305555555555556, 0.9283459595959596, 0.9223484848484849, 0.9081439393939394, 0.9046717171717171, 0.8977272727272727, 0.8898358585858586, 0.8620580808080808, 0.8544823232323232, 0.8327020202020202, 0.7992424242424242, 0.7481060606060606, 0.7323232323232324, 0.709280303030303, 0.6865530303030303, 0.6303661616161617, 0.5684974747474747, 0.46622474747474746, 0.18244949494949494, 0.15561868686868688, 0.15088383838383837, 0.026515151515151516, 0.12342171717171717, 0.6966540404040404, 0.7900883838383839, 0.8371212121212122, 0.8832070707070707, 0.8301767676767676, 0.7774621212121212, 0.5438762626262627, 0.11363636363636363, 0.9160353535353535, 0.10858585858585859, 0.11395202020202021, 0.10542929292929293, 0.10227272727272728, 0.10258838383838384, 0.1038510101010101, 0.13383838383838384, 0.017676767676767676, 0.024305555555555556, 0.14962121212121213, 0.52114898989899, 0.5397727272727273, 0.5590277777777778, 0.5748106060606061, 0.610479797979798, 0.6496212121212122, 0.6777146464646465, 0.7449494949494949, 0.7714646464646465, 0.8349116161616161, 0.8459595959595959, 0.8639520202020202, 0.8977272727272727, 0.9084595959595959, 0.9201388888888888, 0.9444444444444444, 0.9463383838383839, 0.9416035353535354, 0.913510101010101, 0.9040404040404041, 0.8686868686868687, 0.8576388888888888, 0.8402777777777778, 0.7828282828282829, 0.764520202020202, 0.7326388888888888, 0.663510101010101, 0.6398358585858586, 0.5924873737373737, 0.5678661616161617, 0.5489267676767676, 0.53125, 0.5157828282828283, 0.12973484848484848, 0.022095959595959596, 0.017992424242424244, 0.021464646464646464, 0.020517676767676768, 0.020202020202020204, 0.019570707070707072, 0.01893939393939394, 0.018623737373737372, 0.019570707070707072, 0.019886363636363636, 0.019886363636363636, 0.021464646464646464, 0.020833333333333332, 0.021464646464646464, 0.034406565656565656, 0.03535353535353535, 0.036616161616161616, 0.7888257575757576, 0.8573232323232324, 0.9318181818181818, 0.9024621212121212, 0.8128156565656566, 0.7768308080808081, 0.04450757575757576, 0.18529040404040403, 0.7660984848484849, 0.88510101010101, 0.9460227272727273, 0.9261363636363636, 0.853219696969697, 0.7522095959595959, 0.02904040404040404, 0.36332070707070707, 0.476010101010101, 0.5609217171717171, 0.6452020202020202, 0.7215909090909091, 0.7894570707070707, 0.8630050505050505, 0.8977272727272727, 0.9305555555555556, 0.9406565656565656, 0.9160353535353535, 0.8854166666666666, 0.8440656565656566, 0.7496843434343434, 0.6770833333333334, 0.6070075757575758, 0.52114898989899, 0.41382575757575757, 0.3314393939393939, 0.03377525252525253, 0.12468434343434344, 0.8914141414141414, 0.6294191919191919, 0.04892676767676768, 0.03377525252525253, 0.025883838383838384, 0.029356060606060608, 0.18592171717171718, 0.02335858585858586, 0.0211489898989899, 0.020833333333333332, 0.020517676767676768, 0.021780303030303032, 0.021780303030303032, 0.021780303030303032, 0.021464646464646464, 0.021780303030303032, 0.021464646464646464, 0.020833333333333332, 0.022727272727272728, 0.020833333333333332, 0.0211489898989899, 0.021780303030303032, 0.022095959595959596, 0.023989898989898988, 0.023042929292929292, 0.023989898989898988, 0.023989898989898988, 0.024305555555555556, 0.02462121212121212, 0.02462121212121212, 0.02462121212121212, 0.024936868686868688, 0.025252525252525252, 0.025883838383838384, 0.026515151515151516, 0.02683080808080808, 0.027462121212121212, 0.028409090909090908, 0.03851010101010101, 0.046085858585858584, 0.054924242424242424, 0.08017676767676768, 0.12342171717171717, 0.29261363636363635, 0.6253156565656566], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/6PF2K.gap.json

@@ -0,0 +1 @@
+{"family": "6PF2K", "n_seqs": 916, "length": 239, "gap_rates": [0.925764192139738, 0.8373362445414847, 0.7609170305676856, 0.7106986899563319, 0.6244541484716157, 0.527292576419214, 0.45633187772925765, 0.34388646288209607, 0.28056768558951967, 0.24563318777292575, 0.2292576419213974, 0.22489082969432314, 0.21943231441048036, 0.21943231441048036, 0.21943231441048036, 0.18777292576419213, 0.18449781659388648, 0.18340611353711792, 0.1812227074235808, 0.1812227074235808, 0.1812227074235808, 0.18013100436681223, 0.18013100436681223, 0.17903930131004367, 0.1779475982532751, 0.185589519650655, 0.18449781659388648, 0.18013100436681223, 0.1812227074235808, 0.18013100436681223, 0.1779475982532751, 0.1779475982532751, 0.17903930131004367, 0.17903930131004367, 0.17903930131004367, 0.17685589519650655, 0.17903930131004367, 0.17139737991266377, 0.1703056768558952, 0.1703056768558952, 0.17139737991266377, 0.1703056768558952, 0.16812227074235808, 0.16593886462882096, 0.16703056768558952, 0.16703056768558952, 0.16703056768558952, 0.1648471615720524, 0.16593886462882096, 0.16812227074235808, 0.16703056768558952, 0.16593886462882096, 0.16048034934497818, 0.15829694323144106, 0.14847161572052403, 0.14301310043668122, 0.13646288209606988, 0.7052401746724891, 0.8024017467248908, 0.9061135371179039, 0.9137554585152838, 0.915938864628821, 0.9093886462882096, 0.888646288209607, 0.75, 0.6528384279475983, 0.24126637554585154, 0.15283842794759825, 0.1539301310043668, 0.1615720524017467, 0.17139737991266377, 0.1539301310043668, 0.1539301310043668, 0.15611353711790393, 0.15283842794759825, 0.15938864628820962, 0.1572052401746725, 0.1572052401746725, 0.1539301310043668, 0.16375545851528384, 0.1648471615720524, 0.16375545851528384, 0.1615720524017467, 0.15938864628820962, 0.15611353711790393, 0.1572052401746725, 0.15829694323144106, 0.15829694323144106, 0.15829694323144106, 0.15829694323144106, 0.1572052401746725, 0.15283842794759825, 0.1539301310043668, 0.15283842794759825, 0.1539301310043668, 0.1539301310043668, 0.15611353711790393, 0.15502183406113537, 0.1539301310043668, 0.15502183406113537, 0.462882096069869, 0.15829694323144106, 0.15829694323144106, 0.16266375545851527, 0.16703056768558952, 0.15938864628820962, 0.16048034934497818, 0.16048034934497818, 0.16266375545851527, 0.16593886462882096, 0.16703056768558952, 0.16593886462882096, 0.16593886462882096, 0.16266375545851527, 0.16266375545851527, 0.1615720524017467, 0.1615720524017467, 0.16048034934497818, 0.16048034934497818, 0.16048034934497818, 0.16266375545851527, 0.15938864628820962, 0.16048034934497818, 0.15938864628820962, 0.15938864628820962, 0.16048034934497818, 0.16048034934497818, 0.16048034934497818, 0.16048034934497818, 0.24017467248908297, 0.7860262008733624, 0.9170305676855895, 0.9497816593886463, 0.8624454148471615, 0.7456331877729258, 0.1703056768558952, 0.15611353711790393, 0.15938864628820962, 0.1615720524017467, 0.1615720524017467, 0.16266375545851527, 0.16375545851528384, 0.16375545851528384, 0.16266375545851527, 0.1615720524017467, 0.16048034934497818, 0.16048034934497818, 0.16048034934497818, 0.1615720524017467, 0.16266375545851527, 0.1615720524017467, 0.16266375545851527, 0.16266375545851527, 0.16048034934497818, 0.16048034934497818, 0.15829694323144106, 0.1539301310043668, 0.15502183406113537, 0.15938864628820962, 0.15829694323144106, 0.15829694323144106, 0.3558951965065502, 0.17248908296943233, 0.17139737991266377, 0.16593886462882096, 0.15502183406113537, 0.15829694323144106, 0.15611353711790393, 0.1572052401746725, 0.1572052401746725, 0.15611353711790393, 0.15611353711790393, 0.8930131004366813, 0.1539301310043668, 0.15283842794759825, 0.14956331877729256, 0.14847161572052403, 0.14847161572052403, 0.14847161572052403, 0.14737991266375547, 0.14737991266375547, 0.14737991266375547, 0.14737991266375547, 0.14737991266375547, 0.14737991266375547, 0.14519650655021835, 0.1462882096069869, 0.1462882096069869, 0.1462882096069869, 0.1462882096069869, 0.14737991266375547, 0.14847161572052403, 0.14956331877729256, 0.777292576419214, 0.5414847161572053, 0.4945414847161572, 0.38209606986899564, 0.1648471615720524, 0.17139737991266377, 0.17467248908296942, 0.17685589519650655, 0.1779475982532751, 0.17903930131004367, 0.17903930131004367, 0.18013100436681223, 0.18340611353711792, 0.18013100436681223, 0.1812227074235808, 0.925764192139738, 0.19323144104803494, 0.1888646288209607, 0.185589519650655, 0.18777292576419213, 0.18777292576419213, 0.19104803493449782, 0.1943231441048035, 0.1965065502183406, 0.19868995633187772, 0.19868995633187772, 0.2019650655021834, 0.9323144104803494, 0.20305676855895197, 0.2096069868995633, 0.20851528384279475, 0.2096069868995633, 0.21179039301310043, 0.21179039301310043, 0.21069868995633187, 0.212882096069869, 0.21506550218340612, 0.21506550218340612, 0.2183406113537118, 0.2205240174672489, 0.22489082969432314, 0.23034934497816595, 0.2390829694323144, 0.2576419213973799, 0.38427947598253276, 0.5524017467248908], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/7TM_GPCR_Srd.gap.json

@@ -0,0 +1 @@
+{"family": "7TM_GPCR_Srd", "n_seqs": 397, "length": 295, "gap_rates": [0.8463476070528967, 0.72544080604534, 0.6498740554156172, 0.6045340050377834, 0.5717884130982368, 0.5541561712846348, 0.5415617128463476, 0.5289672544080605, 0.5289672544080605, 0.5239294710327456, 0.5214105793450882, 0.5214105793450882, 0.5214105793450882, 0.5214105793450882, 0.5188916876574308, 0.5188916876574308, 0.5188916876574308, 0.5163727959697733, 0.5163727959697733, 0.5163727959697733, 0.5163727959697733, 0.5113350125944585, 0.5113350125944585, 0.5012594458438288, 0.5012594458438288, 0.49622166246851385, 0.49622166246851385, 0.49622166246851385, 0.49622166246851385, 0.4987405541561713, 0.4811083123425693, 0.4811083123425693, 0.4811083123425693, 0.4811083123425693, 0.47858942065491183, 0.47858942065491183, 0.47103274559193953, 0.47103274559193953, 0.47103274559193953, 0.47103274559193953, 0.47103274559193953, 0.4609571788413098, 0.4508816120906801, 0.4508816120906801, 0.4508816120906801, 0.44836272040302266, 0.44836272040302266, 0.44836272040302266, 0.44836272040302266, 0.44836272040302266, 0.44836272040302266, 0.44836272040302266, 0.44836272040302266, 0.44836272040302266, 0.44584382871536526, 0.43828715365239296, 0.4332493702770781, 0.43828715365239296, 0.4508816120906801, 0.4534005037783375, 0.9496221662468514, 0.45591939546599497, 0.45843828715365237, 0.4634760705289673, 0.45843828715365237, 0.45843828715365237, 0.45591939546599497, 0.45843828715365237, 0.45591939546599497, 0.45591939546599497, 0.4534005037783375, 0.45591939546599497, 0.45843828715365237, 0.45591939546599497, 0.45591939546599497, 0.4534005037783375, 0.4534005037783375, 0.44836272040302266, 0.44584382871536526, 0.44584382871536526, 0.44836272040302266, 0.4508816120906801, 0.4534005037783375, 0.4534005037783375, 0.45591939546599497, 0.473551637279597, 0.4811083123425693, 0.4811083123425693, 0.4836272040302267, 0.4811083123425693, 0.48614609571788414, 0.48614609571788414, 0.48614609571788414, 0.48866498740554154, 0.48866498740554154, 0.4811083123425693, 0.48614609571788414, 0.4836272040302267, 0.4811083123425693, 0.4836272040302267, 0.48614609571788414, 0.48614609571788414, 0.48614609571788414, 0.48614609571788414, 0.48614609571788414, 0.48866498740554154, 0.48866498740554154, 0.48866498740554154, 0.491183879093199, 0.491183879093199, 0.48866498740554154, 0.4811083123425693, 0.48614609571788414, 0.48614609571788414, 0.48614609571788414, 0.48614609571788414, 0.49370277078085645, 0.8337531486146096, 0.49370277078085645, 0.491183879093199, 0.48614609571788414, 0.4811083123425693, 0.4760705289672544, 0.473551637279597, 0.47103274559193953, 0.46851385390428213, 0.4659949622166247, 0.4634760705289673, 0.4659949622166247, 0.47103274559193953, 0.473551637279597, 0.4760705289672544, 0.4811083123425693, 0.491183879093199, 0.48866498740554154, 0.4811083123425693, 0.47103274559193953, 0.4760705289672544, 0.473551637279597, 0.4760705289672544, 0.46851385390428213, 0.4760705289672544, 0.4760705289672544, 0.4811083123425693, 0.47858942065491183, 0.47103274559193953, 0.473551637279597, 0.47103274559193953, 0.47103274559193953, 0.473551637279597, 0.47103274559193953, 0.47103274559193953, 0.4760705289672544, 0.47103274559193953, 0.4659949622166247, 0.4659949622166247, 0.4609571788413098, 0.4634760705289673, 0.4609571788413098, 0.4760705289672544, 0.4609571788413098, 0.4609571788413098, 0.45591939546599497, 0.4508816120906801, 0.4760705289672544, 0.47103274559193953, 0.47103274559193953, 0.853904282115869, 0.4534005037783375, 0.44080604534005036, 0.44080604534005036, 0.43828715365239296, 0.49370277078085645, 0.45843828715365237, 0.43073047858942065, 0.4357682619647355, 0.4282115869017632, 0.4256926952141058, 0.42317380352644834, 0.44080604534005036, 0.4282115869017632, 0.42317380352644834, 0.4181360201511335, 0.4156171284634761, 0.4282115869017632, 0.41309823677581864, 0.4080604534005038, 0.40554156171284633, 0.40554156171284633, 0.3979848866498741, 0.3979848866498741, 0.40302267002518893, 0.40302267002518893, 0.40302267002518893, 0.3954659949622166, 0.3929471032745592, 0.3929471032745592, 0.3904282115869018, 0.3929471032745592, 0.3904282115869018, 0.3853904282115869, 0.38287153652392947, 0.3853904282115869, 0.3853904282115869, 0.3929471032745592, 0.3954659949622166, 0.3929471032745592, 0.4005037783375315, 0.4005037783375315, 0.3979848866498741, 0.4005037783375315, 0.40302267002518893, 0.5667506297229219, 0.5012594458438288, 0.4811083123425693, 0.4256926952141058, 0.38287153652392947, 0.3677581863979849, 0.36523929471032746, 0.36523929471032746, 0.3702770780856423, 0.3677581863979849, 0.3677581863979849, 0.3702770780856423, 0.3702770780856423, 0.36523929471032746, 0.3602015113350126, 0.35516372795969775, 0.3501259445843829, 0.33249370277078083, 0.35516372795969775, 0.36272040302267, 0.3602015113350126, 0.3526448362720403, 0.35516372795969775, 0.35516372795969775, 0.3501259445843829, 0.3501259445843829, 0.3526448362720403, 0.3526448362720403, 0.3526448362720403, 0.3526448362720403, 0.3526448362720403, 0.3526448362720403, 0.6926952141057935, 0.3501259445843829, 0.34760705289672544, 0.34760705289672544, 0.3501259445843829, 0.3526448362720403, 0.3526448362720403, 0.35768261964735515, 0.3501259445843829, 0.3501259445843829, 0.3602015113350126, 0.3778337531486146, 0.35516372795969775, 0.35516372795969775, 0.35768261964735515, 0.35516372795969775, 0.35768261964735515, 0.35768261964735515, 0.35768261964735515, 0.3602015113350126, 0.35768261964735515, 0.35768261964735515, 0.3602015113350126, 0.37279596977329976, 0.3778337531486146, 0.380352644836272, 0.3853904282115869, 0.3853904282115869, 0.3929471032745592, 0.3929471032745592, 0.3929471032745592, 0.3979848866498741, 0.3979848866498741, 0.3979848866498741, 0.3979848866498741, 0.4005037783375315, 0.4005037783375315, 0.40554156171284633, 0.40554156171284633, 0.4080604534005038, 0.4105793450881612, 0.41309823677581864, 0.42317380352644834, 0.4256926952141058, 0.4282115869017632, 0.4282115869017632, 0.4332493702770781, 0.4534005037783375, 0.47103274559193953, 0.5869017632241813, 0.8463476070528967], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/7TM_GPCR_Srh.gap.json

@@ -0,0 +1 @@
+{"family": "7TM_GPCR_Srh", "n_seqs": 384, "length": 317, "gap_rates": [0.6822916666666666, 0.4427083333333333, 0.3697916666666667, 0.328125, 0.3072916666666667, 0.2890625, 0.2864583333333333, 0.2786458333333333, 0.2708333333333333, 0.265625, 0.2630208333333333, 0.2630208333333333, 0.2578125, 0.2552083333333333, 0.25, 0.25, 0.25, 0.24479166666666666, 0.24479166666666666, 0.24739583333333334, 0.24479166666666666, 0.24479166666666666, 0.24479166666666666, 0.2421875, 0.23958333333333334, 0.23958333333333334, 0.2421875, 0.23958333333333334, 0.23958333333333334, 0.23697916666666666, 0.23697916666666666, 0.23697916666666666, 0.23697916666666666, 0.23697916666666666, 0.23697916666666666, 0.2265625, 0.22916666666666666, 0.2265625, 0.2265625, 0.22395833333333334, 0.22916666666666666, 0.2265625, 0.2265625, 0.22395833333333334, 0.22395833333333334, 0.22135416666666666, 0.22395833333333334, 0.22395833333333334, 0.22135416666666666, 0.21354166666666666, 0.2109375, 0.2109375, 0.21614583333333334, 0.21614583333333334, 0.21614583333333334, 0.21614583333333334, 0.21614583333333334, 0.21354166666666666, 0.2109375, 0.2109375, 0.20833333333333334, 0.20833333333333334, 0.20833333333333334, 0.20572916666666666, 0.20572916666666666, 0.20572916666666666, 0.20572916666666666, 0.20572916666666666, 0.21354166666666666, 0.20572916666666666, 0.20572916666666666, 0.203125, 0.20572916666666666, 0.20572916666666666, 0.20572916666666666, 0.20572916666666666, 0.20572916666666666, 0.20572916666666666, 0.20572916666666666, 0.20833333333333334, 0.20833333333333334, 0.9479166666666666, 0.3359375, 0.3046875, 0.2994791666666667, 0.2630208333333333, 0.19791666666666666, 0.203125, 0.20052083333333334, 0.20052083333333334, 0.20052083333333334, 0.20052083333333334, 0.19791666666666666, 0.19791666666666666, 0.19791666666666666, 0.1953125, 0.1953125, 0.203125, 0.203125, 0.20052083333333334, 0.19791666666666666, 0.19791666666666666, 0.1953125, 0.19270833333333334, 0.19010416666666666, 0.19010416666666666, 0.19010416666666666, 0.19270833333333334, 0.19270833333333334, 0.1953125, 0.1953125, 0.19270833333333334, 0.19270833333333334, 0.19010416666666666, 0.1875, 0.1875, 0.3203125, 0.19010416666666666, 0.2734375, 0.2526041666666667, 0.9296875, 0.796875, 0.5130208333333334, 0.22916666666666666, 0.19791666666666666, 0.19791666666666666, 0.19791666666666666, 0.1953125, 0.19270833333333334, 0.9453125, 0.8619791666666666, 0.18489583333333334, 0.1875, 0.18489583333333334, 0.18489583333333334, 0.18489583333333334, 0.18489583333333334, 0.18489583333333334, 0.1875, 0.1875, 0.1875, 0.19010416666666666, 0.1875, 0.18489583333333334, 0.18489583333333334, 0.1875, 0.19270833333333334, 0.21614583333333334, 0.18489583333333334, 0.18489583333333334, 0.18489583333333334, 0.18489583333333334, 0.9375, 0.19270833333333334, 0.19010416666666666, 0.1875, 0.8203125, 0.1875, 0.19010416666666666, 0.19010416666666666, 0.1875, 0.1875, 0.18489583333333334, 0.19010416666666666, 0.18229166666666666, 0.1796875, 0.17447916666666666, 0.17708333333333334, 0.18229166666666666, 0.171875, 0.17708333333333334, 0.18229166666666666, 0.1875, 0.19270833333333334, 0.23958333333333334, 0.21354166666666666, 0.18489583333333334, 0.234375, 0.17708333333333334, 0.53125, 0.17708333333333334, 0.16666666666666666, 0.16145833333333334, 0.1640625, 0.15885416666666666, 0.16145833333333334, 0.16145833333333334, 0.1640625, 0.921875, 0.16666666666666666, 0.16666666666666666, 0.15364583333333334, 0.7994791666666666, 0.828125, 0.7526041666666666, 0.16145833333333334, 0.16927083333333334, 0.15364583333333334, 0.14583333333333334, 0.14322916666666666, 0.140625, 0.140625, 0.140625, 0.13802083333333334, 0.13802083333333334, 0.1328125, 0.13020833333333334, 0.12760416666666666, 0.12760416666666666, 0.12760416666666666, 0.12760416666666666, 0.12760416666666666, 0.125, 0.125, 0.125, 0.125, 0.125, 0.125, 0.12760416666666666, 0.125, 0.13020833333333334, 0.125, 0.125, 0.12239583333333333, 0.12239583333333333, 0.11979166666666667, 0.3098958333333333, 0.3333333333333333, 0.9192708333333334, 0.9375, 0.7317708333333334, 0.1640625, 0.1171875, 0.11458333333333333, 0.1171875, 0.1171875, 0.11458333333333333, 0.11197916666666667, 0.11458333333333333, 0.11458333333333333, 0.11197916666666667, 0.109375, 0.109375, 0.109375, 0.109375, 0.109375, 0.11197916666666667, 0.11197916666666667, 0.10677083333333333, 0.10677083333333333, 0.10416666666666667, 0.10416666666666667, 0.10677083333333333, 0.10416666666666667, 0.10677083333333333, 0.109375, 0.11197916666666667, 0.11197916666666667, 0.1171875, 0.12760416666666666, 0.13020833333333334, 0.12760416666666666, 0.125, 0.125, 0.125, 0.125, 0.125, 0.12760416666666666, 0.13541666666666666, 0.13802083333333334, 0.1328125, 0.15104166666666666, 0.14583333333333334, 0.14322916666666666, 0.9244791666666666, 0.14322916666666666, 0.15625, 0.1640625, 0.15625, 0.1640625, 0.16145833333333334, 0.16666666666666666, 0.16666666666666666, 0.16666666666666666, 0.16666666666666666, 0.16927083333333334, 0.16927083333333334, 0.17447916666666666, 0.1796875, 0.18229166666666666, 0.18229166666666666, 0.18489583333333334, 0.18489583333333334, 0.1875, 0.19010416666666666, 0.19010416666666666, 0.19010416666666666, 0.19010416666666666, 0.19270833333333334, 0.19791666666666666, 0.19791666666666666, 0.19791666666666666, 0.19791666666666666, 0.20052083333333334, 0.203125, 0.203125, 0.203125, 0.203125, 0.203125, 0.20572916666666666, 0.20833333333333334, 0.2265625, 0.23958333333333334, 0.2552083333333333, 0.2916666666666667, 0.4609375, 0.9010416666666666], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/AAA_3.gap.json

@@ -0,0 +1 @@
+{"family": "AAA_3", "n_seqs": 2858, "length": 135, "gap_rates": [0.06857942617214835, 0.026242127361791462, 0.021693491952414275, 0.020643806857942617, 0.020293911826452064, 0.020293911826452064, 0.01959412176347096, 0.01959412176347096, 0.01959412176347096, 0.01959412176347096, 0.01959412176347096, 0.019244226731980407, 0.019244226731980407, 0.019244226731980407, 0.017844646606018196, 0.017844646606018196, 0.017844646606018196, 0.017844646606018196, 0.017844646606018196, 0.017844646606018196, 0.01749475157452764, 0.01749475157452764, 0.017144856543037088, 0.017144856543037088, 0.016445066480055982, 0.01609517144856543, 0.015745276417074877, 0.01609517144856543, 0.01609517144856543, 0.015045486354093772, 0.01609517144856543, 0.015045486354093772, 0.01469559132260322, 0.015395381385584325, 0.015395381385584325, 0.014345696291112667, 0.01364590622813156, 0.01364590622813156, 0.01364590622813156, 0.013995801259622114, 0.014345696291112667, 0.014345696291112667, 0.015395381385584325, 0.015395381385584325, 0.015395381385584325, 0.015045486354093772, 0.015045486354093772, 0.01469559132260322, 0.01994401679496151, 0.03498950314905528, 0.03673897830650805, 0.834149755073478, 0.9485654303708887, 0.8614415675297411, 0.8285514345696291, 0.01749475157452764, 0.015745276417074877, 0.013995801259622114, 0.01364590622813156, 0.01364590622813156, 0.013995801259622114, 0.013995801259622114, 0.013995801259622114, 0.014345696291112667, 0.014345696291112667, 0.013296011196641007, 0.013296011196641007, 0.013296011196641007, 0.00979706088173548, 0.00979706088173548, 0.009097270818754374, 0.009097270818754374, 0.009097270818754374, 0.00874737578726382, 0.00874737578726382, 0.00874737578726382, 0.00874737578726382, 0.00874737578726382, 0.008397480755773267, 0.008397480755773267, 0.008047585724282715, 0.008047585724282715, 0.008397480755773267, 0.008397480755773267, 0.008397480755773267, 0.00874737578726382, 0.00874737578726382, 0.008397480755773267, 0.008397480755773267, 0.007697690692792162, 0.007697690692792162, 0.007697690692792162, 0.007697690692792162, 0.008047585724282715, 0.00874737578726382, 0.00874737578726382, 0.014345696291112667, 0.014345696291112667, 0.015745276417074877, 0.015395381385584325, 0.010146955913226032, 0.010496850944716585, 0.01119664100769769, 0.01119664100769769, 0.010846745976207137, 0.01224632610216935, 0.026242127361791462, 0.01224632610216935, 0.01119664100769769, 0.010496850944716585, 0.009447165850244927, 0.012946116165150455, 0.009447165850244927, 0.00979706088173548, 0.009447165850244927, 0.011546536039188244, 0.011896431070678797, 0.010496850944716585, 0.01119664100769769, 0.010846745976207137, 0.010846745976207137, 0.01119664100769769, 0.015395381385584325, 0.01469559132260322, 0.01469559132260322, 0.015745276417074877, 0.01609517144856543, 0.017144856543037088, 0.01749475157452764, 0.017844646606018196, 0.017844646606018196, 0.017844646606018196, 0.01819454163750875, 0.03079076277116865, 0.13540937718684395], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/AAA_PrkA.gap.json

@@ -0,0 +1 @@
+{"family": "AAA_PrkA", "n_seqs": 514, "length": 394, "gap_rates": [0.8365758754863813, 0.1926070038910506, 0.17704280155642024, 0.17704280155642024, 0.17509727626459143, 0.17509727626459143, 0.17509727626459143, 0.17509727626459143, 0.17509727626459143, 0.17509727626459143, 0.17509727626459143, 0.17509727626459143, 0.17509727626459143, 0.17509727626459143, 0.17315175097276264, 0.17315175097276264, 0.17315175097276264, 0.17315175097276264, 0.17315175097276264, 0.17315175097276264, 0.17315175097276264, 0.17315175097276264, 0.17315175097276264, 0.17120622568093385, 0.17120622568093385, 0.17120622568093385, 0.16926070038910507, 0.16926070038910507, 0.16926070038910507, 0.16926070038910507, 0.16926070038910507, 0.556420233463035, 0.556420233463035, 0.17120622568093385, 0.2840466926070039, 0.4591439688715953, 0.4474708171206226, 0.4455252918287938, 0.44163424124513617, 0.44357976653696496, 0.45330739299610895, 0.45330739299610895, 0.4494163424124514, 0.4455252918287938, 0.44357976653696496, 0.4357976653696498, 0.42412451361867703, 0.41245136186770426, 0.2782101167315175, 0.1867704280155642, 0.17120622568093385, 0.17509727626459143, 0.188715953307393, 0.188715953307393, 0.1828793774319066, 0.1867704280155642, 0.17704280155642024, 0.16731517509727625, 0.15369649805447472, 0.14785992217898833, 0.5389105058365758, 0.14396887159533073, 0.14396887159533073, 0.14396887159533073, 0.14396887159533073, 0.14396887159533073, 0.14396887159533073, 0.14396887159533073, 0.14396887159533073, 0.14591439688715954, 0.14591439688715954, 0.14396887159533073, 0.14396887159533073, 0.14202334630350194, 0.14202334630350194, 0.7626459143968871, 0.14202334630350194, 0.14202334630350194, 0.14202334630350194, 0.14202334630350194, 0.14202334630350194, 0.14202334630350194, 0.14202334630350194, 0.14202334630350194, 0.13813229571984437, 0.13813229571984437, 0.14007782101167315, 0.14007782101167315, 0.13813229571984437, 0.13813229571984437, 0.13813229571984437, 0.13813229571984437, 0.13813229571984437, 0.13813229571984437, 0.13618677042801555, 0.13618677042801555, 0.13618677042801555, 0.13618677042801555, 0.13618677042801555, 0.13618677042801555, 0.13229571984435798, 0.13229571984435798, 0.1303501945525292, 0.1303501945525292, 0.1303501945525292, 0.1303501945525292, 0.1303501945525292, 0.1303501945525292, 0.13229571984435798, 0.13424124513618677, 0.13618677042801555, 0.13229571984435798, 0.12840466926070038, 0.12840466926070038, 0.12840466926070038, 0.13229571984435798, 0.6147859922178989, 0.6206225680933852, 0.622568093385214, 0.622568093385214, 0.6147859922178989, 0.5389105058365758, 0.1264591439688716, 0.1264591439688716, 0.1264591439688716, 0.1264591439688716, 0.1264591439688716, 0.7334630350194552, 0.7334630350194552, 0.8832684824902723, 0.8852140077821011, 0.8949416342412452, 0.8988326848249028, 0.9105058365758755, 0.9105058365758755, 0.9455252918287937, 0.9299610894941635, 0.9105058365758755, 0.8988326848249028, 0.896887159533074, 0.8891050583657587, 0.8852140077821011, 0.8813229571984436, 0.7334630350194552, 0.7334630350194552, 0.1245136186770428, 0.11867704280155641, 0.11089494163424124, 0.11089494163424124, 0.11089494163424124, 0.11089494163424124, 0.11089494163424124, 0.11089494163424124, 0.11089494163424124, 0.11284046692607004, 0.11284046692607004, 0.11284046692607004, 0.11284046692607004, 0.603112840466926, 0.11089494163424124, 0.11089494163424124, 0.11284046692607004, 0.11089494163424124, 0.11089494163424124, 0.11089494163424124, 0.11284046692607004, 0.11284046692607004, 0.11284046692607004, 0.11284046692607004, 0.11284046692607004, 0.11284046692607004, 0.11284046692607004, 0.11089494163424124, 0.48443579766536965, 0.8754863813229572, 0.8793774319066148, 0.9007782101167315, 0.9416342412451362, 0.8793774319066148, 0.8793774319066148, 0.48638132295719844, 0.4805447470817121, 0.10894941634241245, 0.10700389105058365, 0.10700389105058365, 0.10505836575875487, 0.10505836575875487, 0.10505836575875487, 0.10505836575875487, 0.10311284046692606, 0.10311284046692606, 0.10116731517509728, 0.09727626459143969, 0.09727626459143969, 0.09727626459143969, 0.0933852140077821, 0.4961089494163424, 0.0933852140077821, 0.0933852140077821, 0.0933852140077821, 0.0933852140077821, 0.0933852140077821, 0.0933852140077821, 0.0914396887159533, 0.08754863813229571, 0.08560311284046693, 0.08365758754863813, 0.08560311284046693, 0.08365758754863813, 0.08365758754863813, 0.08365758754863813, 0.08171206225680934, 0.07782101167315175, 0.07782101167315175, 0.07782101167315175, 0.07782101167315175, 0.07782101167315175, 0.07587548638132295, 0.07392996108949416, 0.07587548638132295, 0.07587548638132295, 0.06809338521400778, 0.058365758754863814, 0.058365758754863814, 0.058365758754863814, 0.058365758754863814, 0.0622568093385214, 0.06031128404669261, 0.06420233463035019, 0.06614785992217899, 0.06420233463035019, 0.06614785992217899, 0.0622568093385214, 0.07003891050583658, 0.07003891050583658, 0.06420233463035019, 0.054474708171206226, 0.05642023346303502, 0.05642023346303502, 0.058365758754863814, 0.058365758754863814, 0.05642023346303502, 0.058365758754863814, 0.06614785992217899, 0.05642023346303502, 0.054474708171206226, 0.054474708171206226, 0.054474708171206226, 0.054474708171206226, 0.06420233463035019, 0.622568093385214, 0.05642023346303502, 0.054474708171206226, 0.054474708171206226, 0.054474708171206226, 0.054474708171206226, 0.054474708171206226, 0.054474708171206226, 0.054474708171206226, 0.054474708171206226, 0.054474708171206226, 0.058365758754863814, 0.07392996108949416, 0.058365758754863814, 0.05642023346303502, 0.054474708171206226, 0.054474708171206226, 0.054474708171206226, 0.054474708171206226, 0.07003891050583658, 0.058365758754863814, 0.05642023346303502, 0.054474708171206226, 0.054474708171206226, 0.054474708171206226, 0.054474708171206226, 0.054474708171206226, 0.048638132295719845, 0.048638132295719845, 0.048638132295719845, 0.048638132295719845, 0.048638132295719845, 0.048638132295719845, 0.048638132295719845, 0.048638132295719845, 0.048638132295719845, 0.048638132295719845, 0.05058365758754864, 0.05058365758754864, 0.048638132295719845, 0.048638132295719845, 0.048638132295719845, 0.048638132295719845, 0.05058365758754864, 0.05058365758754864, 0.05058365758754864, 0.05058365758754864, 0.05058365758754864, 0.05058365758754864, 0.05058365758754864, 0.48638132295719844, 0.11478599221789883, 0.0622568093385214, 0.0622568093385214, 0.05252918287937743, 0.0622568093385214, 0.08171206225680934, 0.05642023346303502, 0.05252918287937743, 0.05252918287937743, 0.048638132295719845, 0.04474708171206226, 0.04669260700389105, 0.048638132295719845, 0.054474708171206226, 0.05642023346303502, 0.058365758754863814, 0.058365758754863814, 0.06031128404669261, 0.06031128404669261, 0.058365758754863814, 0.0622568093385214, 0.06809338521400778, 0.07198443579766536, 0.07587548638132295, 0.07587548638132295, 0.07198443579766536, 0.07782101167315175, 0.07782101167315175, 0.07003891050583658, 0.0622568093385214, 0.0622568093385214, 0.0622568093385214, 0.0622568093385214, 0.0622568093385214, 0.0622568093385214, 0.0622568093385214, 0.0622568093385214, 0.058365758754863814, 0.058365758754863814, 0.058365758754863814, 0.06031128404669261, 0.058365758754863814, 0.058365758754863814, 0.0622568093385214, 0.06420233463035019, 0.07587548638132295, 0.07587548638132295, 0.07976653696498054, 0.07976653696498054, 0.07976653696498054, 0.07976653696498054, 0.08365758754863813, 0.08365758754863813, 0.08949416342412451, 0.0914396887159533, 0.09533073929961089, 0.09727626459143969, 0.09533073929961089, 0.09922178988326848, 0.09727626459143969, 0.10505836575875487, 0.13618677042801555, 0.10311284046692606, 0.10505836575875487, 0.2490272373540856, 0.10116731517509728, 0.09727626459143969, 0.09727626459143969, 0.09727626459143969, 0.09922178988326848, 0.09922178988326848, 0.09922178988326848, 0.10116731517509728, 0.10116731517509728, 0.10116731517509728, 0.10116731517509728, 0.10116731517509728, 0.10116731517509728, 0.10116731517509728, 0.10116731517509728, 0.10116731517509728, 0.10116731517509728, 0.10116731517509728, 0.10116731517509728, 0.10116731517509728, 0.10311284046692606, 0.10505836575875487, 0.11089494163424124, 0.11867704280155641, 0.13813229571984437, 0.20038910505836577, 0.4260700389105058, 0.5739299610894941], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/AAT.gap.json

@@ -0,0 +1 @@
+{"family": "AAT", "n_seqs": 611, "length": 280, "gap_rates": [0.9312602291325696, 0.8821603927986906, 0.7741407528641571, 0.5990180032733224, 0.4288052373158756, 0.3109656301145663, 0.2193126022913257, 0.6923076923076923, 0.12929623567921442, 0.10638297872340426, 0.10147299509001637, 0.09819967266775777, 0.09656301145662848, 0.09656301145662848, 0.09656301145662848, 0.8952536824877251, 0.8723404255319149, 0.09656301145662848, 0.09983633387888707, 0.10147299509001637, 0.09819967266775777, 0.09656301145662848, 0.09492635024549918, 0.09983633387888707, 0.09328968903436989, 0.09328968903436989, 0.09001636661211129, 0.08183306055646482, 0.08019639934533551, 0.08183306055646482, 0.08019639934533551, 0.08183306055646482, 0.2144026186579378, 0.309328968903437, 0.6121112929623568, 0.8641571194762684, 0.9034369885433715, 0.9459901800327333, 0.9492635024549918, 0.9476268412438625, 0.9296235679214403, 0.8772504091653028, 0.8265139116202946, 0.5531914893617021, 0.09165302782324058, 0.07364975450081833, 0.07364975450081833, 0.07201309328968904, 0.07364975450081833, 0.06382978723404255, 0.062193126022913256, 0.062193126022913256, 0.8412438625204582, 0.9443535188216039, 0.8183306055646481, 0.05564648117839607, 0.054009819967266774, 0.05073649754500818, 0.049099836333878884, 0.3911620294599018, 0.9328968903436988, 0.1276595744680851, 0.05564648117839607, 0.04746317512274959, 0.2569558101472995, 0.031096563011456628, 0.029459901800327332, 0.029459901800327332, 0.029459901800327332, 0.027823240589198037, 0.0425531914893617, 0.029459901800327332, 0.029459901800327332, 0.027823240589198037, 0.027823240589198037, 0.031096563011456628, 0.8968903436988543, 0.9099836333878887, 0.9312602291325696, 0.9443535188216039, 0.9361702127659575, 0.9181669394435352, 0.9050736497545008, 0.8805237315875614, 0.031096563011456628, 0.031096563011456628, 0.029459901800327332, 0.031096563011456628, 0.031096563011456628, 0.03273322422258593, 0.03273322422258593, 0.03600654664484452, 0.9443535188216039, 0.43044189852700493, 0.044189852700491, 0.03436988543371522, 0.029459901800327332, 0.029459901800327332, 0.031096563011456628, 0.031096563011456628, 0.031096563011456628, 0.03273322422258593, 0.03273322422258593, 0.03273322422258593, 0.03436988543371522, 0.029459901800327332, 0.027823240589198037, 0.027823240589198037, 0.027823240589198037, 0.5040916530278232, 0.03436988543371522, 0.027823240589198037, 0.02618657937806874, 0.02618657937806874, 0.02618657937806874, 0.02618657937806874, 0.02618657937806874, 0.02618657937806874, 0.024549918166939442, 0.024549918166939442, 0.027823240589198037, 0.029459901800327332, 0.029459901800327332, 0.02618657937806874, 0.8919803600654664, 0.9230769230769231, 0.9067103109656302, 0.8805237315875614, 0.027823240589198037, 0.03436988543371522, 0.024549918166939442, 0.027823240589198037, 0.02618657937806874, 0.022913256955810146, 0.024549918166939442, 0.02618657937806874, 0.027823240589198037, 0.09983633387888707, 0.02618657937806874, 0.02618657937806874, 0.027823240589198037, 0.027823240589198037, 0.1342062193126023, 0.04746317512274959, 0.03436988543371522, 0.03927986906710311, 0.08183306055646482, 0.0425531914893617, 0.044189852700491, 0.04746317512274959, 0.04582651391162029, 0.05237315875613748, 0.04746317512274959, 0.049099836333878884, 0.05073649754500818, 0.3993453355155483, 0.24222585924713586, 0.8805237315875614, 0.9034369885433715, 0.9247135842880524, 0.939443535188216, 0.911620294599018, 0.8952536824877251, 0.8527004909983633, 0.060556464811783964, 0.06873977086743044, 0.06546644844517185, 0.07364975450081833, 0.07201309328968904, 0.058919803600654665, 0.8101472995090017, 0.9181669394435352, 0.6415711947626841, 0.25859247135842883, 0.18985270049099837, 0.16202945990180032, 0.06710310965630115, 0.05564648117839607, 0.057283142389525366, 0.057283142389525366, 0.058919803600654665, 0.07037643207855974, 0.9181669394435352, 0.9361702127659575, 0.9230769230769231, 0.9050736497545008, 0.22422258592471359, 0.2127659574468085, 0.10310965630114566, 0.09492635024549918, 0.088379705400982, 0.09165302782324058, 0.09983633387888707, 0.10310965630114566, 0.18985270049099837, 0.7659574468085106, 0.8870703764320785, 0.8379705400981997, 0.7299509001636661, 0.132569558101473, 0.13747954173486088, 0.10965630114566285, 0.10310965630114566, 0.09492635024549918, 0.10147299509001637, 0.09165302782324058, 0.09492635024549918, 0.09656301145662848, 0.09819967266775777, 0.09492635024549918, 0.09656301145662848, 0.09656301145662848, 0.09656301145662848, 0.09492635024549918, 0.09656301145662848, 0.09983633387888707, 0.10965630114566285, 0.10310965630114566, 0.10638297872340426, 0.10801963993453355, 0.11129296235679215, 0.11783960720130933, 0.1276595744680851, 0.5433715220949263, 0.8854337152209493, 0.9443535188216039, 0.9067103109656302, 0.6808510638297872, 0.4795417348608838, 0.3142389525368249, 0.2160392798690671, 0.15384615384615385, 0.14402618657937807, 0.1407528641571195, 0.14402618657937807, 0.14729950900163666, 0.14893617021276595, 0.16039279869067102, 0.16366612111292964, 0.16693944353518822, 0.1718494271685761, 0.2765957446808511, 0.2553191489361702, 0.22913256955810146, 0.22913256955810146, 0.45662847790507366, 0.4451718494271686, 0.44844517184942717, 0.44353518821603927, 0.7283142389525368, 0.33878887070376434, 0.3142389525368249, 0.3011456628477905, 0.25859247135842883, 0.2602291325695581, 0.2684124386252046, 0.2602291325695581, 0.25368248772504093, 0.25368248772504093, 0.25859247135842883, 0.2602291325695581, 0.265139116202946, 0.265139116202946, 0.2684124386252046, 0.2733224222585925, 0.28314238952536824, 0.2864157119476268, 0.28805237315875615, 0.2945990180032733, 0.3011456628477905, 0.3076923076923077, 0.3158756137479542, 0.33060556464811786, 0.34206219312602293, 0.38461538461538464, 0.41243862520458263, 0.44189852700491, 0.5155482815057283, 0.5728314238952537, 0.79050736497545], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/AA_permease_C.gap.json

@@ -0,0 +1 @@
+{"family": "AA_permease_C", "n_seqs": 723, "length": 51, "gap_rates": [0.10096818810511757, 0.08022130013831259, 0.06915629322268327, 0.0677731673582296, 0.0677731673582296, 0.0677731673582296, 0.0677731673582296, 0.013831258644536652, 0.011065006915629323, 0.009681881051175657, 0.009681881051175657, 0.008298755186721992, 0.008298755186721992, 0.008298755186721992, 0.009681881051175657, 0.009681881051175657, 0.009681881051175657, 0.006915629322268326, 0.005532503457814661, 0.004149377593360996, 0.0027662517289073307, 0.0027662517289073307, 0.0013831258644536654, 0.0013831258644536654, 0.0027662517289073307, 0.009681881051175657, 0.009681881051175657, 0.011065006915629323, 0.011065006915629323, 0.011065006915629323, 0.011065006915629323, 0.011065006915629323, 0.011065006915629323, 0.011065006915629323, 0.011065006915629323, 0.011065006915629323, 0.011065006915629323, 0.012448132780082987, 0.019363762102351315, 0.035961272475795295, 0.04702627939142462, 0.04702627939142462, 0.048409405255878286, 0.051175656984785614, 0.06085753803596127, 0.06915629322268327, 0.07330567081604426, 0.07468879668049792, 0.08298755186721991, 0.14246196403872752, 0.27247579529737204], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/AA_synth.gap.json

@@ -0,0 +1 @@
+{"family": "AA_synth", "n_seqs": 170, "length": 179, "gap_rates": [0.03529411764705882, 0.01764705882352941, 0.01764705882352941, 0.01764705882352941, 0.01764705882352941, 0.01764705882352941, 0.01764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.01764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.01764705882352941, 0.01764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.6588235294117647, 0.01764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.6294117647058823, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.0, 0.0, 0.0, 0.0, 0.0058823529411764705, 0.0058823529411764705, 0.0058823529411764705, 0.6, 0.2235294117647059, 0.1, 0.0058823529411764705, 0.0058823529411764705, 0.0058823529411764705, 0.0058823529411764705, 0.0058823529411764705, 0.0058823529411764705, 0.0058823529411764705, 0.0058823529411764705, 0.0058823529411764705, 0.0058823529411764705, 0.0058823529411764705, 0.0058823529411764705, 0.0058823529411764705, 0.0058823529411764705, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.27058823529411763, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.6176470588235294, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.3941176470588235, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.011764705882352941, 0.01764705882352941, 0.01764705882352941, 0.01764705882352941, 0.01764705882352941, 0.01764705882352941, 0.01764705882352941, 0.023529411764705882, 0.12352941176470589], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/ABATE.gap.json

@@ -0,0 +1 @@
+{"family": "ABATE", "n_seqs": 502, "length": 157, "gap_rates": [0.7270916334661355, 0.48804780876494025, 0.2450199203187251, 0.12151394422310757, 0.09362549800796813, 0.061752988047808766, 0.053784860557768925, 0.04780876494023904, 0.04183266932270916, 0.043824701195219126, 0.8725099601593626, 0.9302788844621513, 0.6892430278884463, 0.33665338645418325, 0.3605577689243028, 0.2051792828685259, 0.1852589641434263, 0.15139442231075698, 0.10159362549800798, 0.07370517928286853, 0.05976095617529881, 0.0398406374501992, 0.037848605577689244, 0.025896414342629483, 0.021912350597609563, 0.0199203187250996, 0.01593625498007968, 0.017928286852589643, 0.01593625498007968, 0.0199203187250996, 0.013944223107569721, 0.013944223107569721, 0.01195219123505976, 0.01195219123505976, 0.0099601593625498, 0.0099601593625498, 0.013944223107569721, 0.14741035856573706, 0.12350597609561753, 0.09362549800796813, 0.07370517928286853, 0.03386454183266932, 0.03187250996015936, 0.049800796812749, 0.07171314741035857, 0.0697211155378486, 0.07370517928286853, 0.07569721115537849, 0.13346613545816732, 0.2788844621513944, 0.4800796812749004, 0.549800796812749, 0.7549800796812749, 0.796812749003984, 0.8326693227091634, 0.8625498007968128, 0.9123505976095617, 0.900398406374502, 0.8446215139442231, 0.8147410358565738, 0.7928286852589641, 0.701195219123506, 0.12350597609561753, 0.08565737051792828, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.00199203187250996, 0.00398406374501992, 0.00398406374501992, 0.00398406374501992, 0.00199203187250996, 0.00199203187250996, 0.00398406374501992, 0.00398406374501992, 0.00796812749003984, 0.1553784860557769, 0.25298804780876494, 0.22709163346613545, 0.2729083665338645, 0.33266932270916333, 0.9342629482071713, 0.9462151394422311, 0.9262948207171314, 0.45219123505976094, 0.30278884462151395, 0.17928286852589642, 0.049800796812749, 0.025896414342629483, 0.027888446215139442, 0.02390438247011952, 0.0199203187250996, 0.9362549800796812, 0.025896414342629483, 0.027888446215139442, 0.025896414342629483, 0.025896414342629483, 0.025896414342629483, 0.029880478087649404, 0.08366533864541832, 0.05976095617529881, 0.053784860557768925, 0.049800796812749, 0.049800796812749, 0.0398406374501992, 0.037848605577689244, 0.0398406374501992, 0.0398406374501992, 0.043824701195219126, 0.043824701195219126, 0.045816733067729085, 0.04780876494023904, 0.049800796812749, 0.10358565737051793, 0.09760956175298804, 0.12350597609561753, 0.13346613545816732, 0.1752988047808765, 0.17131474103585656, 0.199203187250996, 0.24701195219123506, 0.2749003984063745, 0.2788844621513944, 0.26693227091633465, 0.2908366533864542, 0.4721115537848606, 0.3944223107569721, 0.30677290836653387, 0.4760956175298805, 0.6693227091633466, 0.7749003984063745, 0.798804780876494, 0.8605577689243028, 0.7888446215139442, 0.7330677290836654, 0.5637450199203188, 0.35856573705179284, 0.11155378486055777, 0.1892430278884462, 0.17330677290836655, 0.18127490039840638, 0.896414342629482, 0.16733067729083664, 0.17131474103585656, 0.18127490039840638, 0.18725099601593626, 0.2051792828685259, 0.22310756972111553, 0.250996015936255, 0.27689243027888444, 0.31673306772908366, 0.34860557768924305, 0.4402390438247012, 0.7390438247011952], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/ACCA.gap.json

@@ -0,0 +1 @@
+{"family": "ACCA", "n_seqs": 1332, "length": 145, "gap_rates": [0.6433933933933934, 0.31756756756756754, 0.2882882882882883, 0.27927927927927926, 0.2732732732732733, 0.2627627627627628, 0.2545045045045045, 0.2484984984984985, 0.24324324324324326, 0.23573573573573572, 0.22972972972972974, 0.22522522522522523, 0.22372372372372373, 0.2222222222222222, 0.22072072072072071, 0.21921921921921922, 0.21696696696696696, 0.21921921921921922, 0.22147147147147148, 0.21996996996996998, 0.21771771771771772, 0.23123123123123124, 0.22597597597597596, 0.24924924924924924, 0.8768768768768769, 0.240990990990991, 0.23573573573573572, 0.22747747747747749, 0.22672672672672672, 0.23423423423423423, 0.20795795795795796, 0.2012012012012012, 0.19894894894894896, 0.19894894894894896, 0.1981981981981982, 0.1966966966966967, 0.19519519519519518, 0.19444444444444445, 0.19144144144144143, 0.1891891891891892, 0.18768768768768768, 0.18543543543543545, 0.18393393393393392, 0.1816816816816817, 0.17942942942942944, 0.17117117117117117, 0.16966966966966968, 0.16366366366366367, 0.15840840840840842, 0.11636636636636637, 0.1021021021021021, 0.08333333333333333, 0.04354354354354354, 0.03078078078078078, 0.025525525525525526, 0.02027027027027027, 0.018018018018018018, 0.018018018018018018, 0.017267267267267267, 0.014264264264264264, 0.01126126126126126, 0.01126126126126126, 0.01126126126126126, 0.015015015015015015, 0.012012012012012012, 0.012012012012012012, 0.012762762762762763, 0.012762762762762763, 0.013513513513513514, 0.010510510510510511, 0.010510510510510511, 0.010510510510510511, 0.010510510510510511, 0.00975975975975976, 0.00975975975975976, 0.00975975975975976, 0.00975975975975976, 0.00975975975975976, 0.00975975975975976, 0.00975975975975976, 0.00975975975975976, 0.00975975975975976, 0.00975975975975976, 0.01126126126126126, 0.012762762762762763, 0.012762762762762763, 0.012762762762762763, 0.012762762762762763, 0.01126126126126126, 0.01126126126126126, 0.010510510510510511, 0.010510510510510511, 0.010510510510510511, 0.00975975975975976, 0.00975975975975976, 0.00975975975975976, 0.00975975975975976, 0.00975975975975976, 0.009009009009009009, 0.009009009009009009, 0.009009009009009009, 0.00975975975975976, 0.00975975975975976, 0.009009009009009009, 0.009009009009009009, 0.009009009009009009, 0.009009009009009009, 0.008258258258258258, 0.0075075075075075074, 0.009009009009009009, 0.008258258258258258, 0.008258258258258258, 0.009009009009009009, 0.009009009009009009, 0.010510510510510511, 0.033783783783783786, 0.03453453453453453, 0.03528528528528529, 0.015765765765765764, 0.015765765765765764, 0.015765765765765764, 0.015765765765765764, 0.015765765765765764, 0.014264264264264264, 0.014264264264264264, 0.014264264264264264, 0.014264264264264264, 0.013513513513513514, 0.013513513513513514, 0.013513513513513514, 0.013513513513513514, 0.013513513513513514, 0.014264264264264264, 0.014264264264264264, 0.014264264264264264, 0.014264264264264264, 0.014264264264264264, 0.014264264264264264, 0.014264264264264264, 0.014264264264264264, 0.015765765765765764, 0.015765765765765764, 0.015765765765765764, 0.01951951951951952, 0.11411411411411411], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/ACDC.gap.json

@@ -0,0 +1 @@
+{"family": "ACDC", "n_seqs": 100, "length": 114, "gap_rates": [0.44, 0.28, 0.21, 0.15, 0.14, 0.14, 0.1, 0.1, 0.08, 0.08, 0.08, 0.07, 0.07, 0.07, 0.07, 0.07, 0.07, 0.07, 0.07, 0.05, 0.04, 0.05, 0.05, 0.06, 0.06, 0.06, 0.06, 0.06, 0.06, 0.06, 0.06, 0.06, 0.3, 0.42, 0.52, 0.63, 0.65, 0.73, 0.74, 0.74, 0.74, 0.79, 0.81, 0.82, 0.83, 0.88, 0.95, 0.9, 0.84, 0.82, 0.82, 0.8, 0.74, 0.74, 0.74, 0.73, 0.66, 0.63, 0.59, 0.05, 0.05, 0.05, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.01, 0.03, 0.03, 0.04, 0.04, 0.04, 0.04, 0.04, 0.05, 0.06, 0.09, 0.13, 0.24, 0.34], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/ACT_6.gap.json

@@ -0,0 +1 @@
+{"family": "ACT_6", "n_seqs": 1274, "length": 82, "gap_rates": [0.8618524332810047, 0.6255886970172685, 0.4858712715855573, 0.12637362637362637, 0.05337519623233909, 0.03218210361067504, 0.016483516483516484, 0.013343799058084773, 0.012558869701726845, 0.005494505494505495, 0.004709576138147566, 0.004709576138147566, 0.004709576138147566, 0.0031397174254317113, 0.0031397174254317113, 0.0031397174254317113, 0.002354788069073783, 0.002354788069073783, 0.002354788069073783, 0.0007849293563579278, 0.0007849293563579278, 0.0007849293563579278, 0.0007849293563579278, 0.0007849293563579278, 0.0007849293563579278, 0.0007849293563579278, 0.0007849293563579278, 0.0015698587127158557, 0.0007849293563579278, 0.0007849293563579278, 0.0, 0.0015698587127158557, 0.0031397174254317113, 0.004709576138147566, 0.004709576138147566, 0.006279434850863423, 0.006279434850863423, 0.00706436420722135, 0.00706436420722135, 0.008634222919937205, 0.01098901098901099, 0.01098901098901099, 0.012558869701726845, 0.013343799058084773, 0.0141287284144427, 0.0141287284144427, 0.0141287284144427, 0.0141287284144427, 0.02040816326530612, 0.027472527472527472, 0.030612244897959183, 0.6640502354788069, 0.945054945054945, 0.9167974882260597, 0.5847723704866562, 0.04081632653061224, 0.04552590266875981, 0.9081632653061225, 0.7621664050235479, 0.04945054945054945, 0.05416012558869702, 0.05180533751962323, 0.07849293563579278, 0.05180533751962323, 0.05416012558869702, 0.06043956043956044, 0.06671899529042387, 0.0706436420722135, 0.07770800627943485, 0.08948194662480377, 0.11930926216640503, 0.17425431711145997, 0.1546310832025118, 0.16562009419152277, 0.17739403453689168, 0.18288854003139718, 0.1891679748822606, 0.206436420722135, 0.2370486656200942, 0.3139717425431711, 0.49921507064364207, 0.8445839874411303], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/AFG1_ATPase.gap.json

@@ -0,0 +1 @@
+{"family": "AFG1_ATPase", "n_seqs": 1403, "length": 412, "gap_rates": [0.9180327868852459, 0.8054169636493229, 0.6863863150392017, 0.6058446186742694, 0.5481111903064861, 0.5103349964362082, 0.48467569493941554, 0.481111903064861, 0.4775481111903065, 0.47113328581610836, 0.4689950106913756, 0.466143977191732, 0.4640057020669993, 0.4597291518175339, 0.45901639344262296, 0.4504632929436921, 0.44689950106913756, 0.4354953670705631, 0.4219529579472559, 0.4155381325730577, 0.4112615823235923, 0.4112615823235923, 0.4105488239486814, 0.4105488239486814, 0.4098360655737705, 0.4091233071988596, 0.40841054882394867, 0.40769779044903776, 0.4069850320741269, 0.406272273699216, 0.406272273699216, 0.40484675694939415, 0.40555951532430506, 0.40270848182466146, 0.925160370634355, 0.9372772630078403, 0.9215965787598004, 0.3998574483250178, 0.40769779044903776, 0.4091233071988596, 0.406272273699216, 0.40555951532430506, 0.40413399857448323, 0.4034212401995723, 0.5010691375623664, 0.46115466856735565, 0.4547398431931575, 0.5630791161796151, 0.7769066286528866, 0.8203848895224519, 0.8595866001425517, 0.8937990021382751, 0.932287954383464, 0.9465431218816821, 0.9415538132573058, 0.9123307198859587, 0.8816821097647898, 0.8296507483962936, 0.7954383464005702, 0.7419814682822523, 0.4632929436920884, 0.43193157519600855, 0.41767640769779046, 0.398431931575196, 0.3806129722024234, 0.3585174625801853, 0.3499643620812545, 0.3471133285816108, 0.40484675694939415, 0.36564504632929434, 0.45260156806842483, 0.924447612259444, 0.8823948681397007, 0.5666429080541696, 0.46044191019244474, 0.3827512473271561, 0.2915181753385602, 0.25302922309337134, 0.2344975053456878, 0.23093371347113328, 0.22665716322166785, 0.22665716322166785, 0.22665716322166785, 0.22594440484675696, 0.22594440484675696, 0.22523164647184604, 0.22451888809693513, 0.22309337134711332, 0.22380612972202424, 0.22380612972202424, 0.22451888809693513, 0.22380612972202424, 0.22380612972202424, 0.2166785459729152, 0.21739130434782608, 0.21596578759800428, 0.2166785459729152, 0.2166785459729152, 0.21881682109764788, 0.22024233784746972, 0.2195295794725588, 0.2195295794725588, 0.2195295794725588, 0.22166785459729152, 0.9308624376336422, 0.925160370634355, 0.21739130434782608, 0.33642195295794725, 0.9308624376336422, 0.2900926585887384, 0.29223093371347114, 0.2936564504632929, 0.28296507483962935, 0.2851033499643621, 0.27726300784034213, 0.27726300784034213, 0.2722736992159658, 0.2209550962223806, 0.218104062722737, 0.21739130434782608, 0.2195295794725588, 0.22523164647184604, 0.22736992159657876, 0.22523164647184604, 0.22166785459729152, 0.22166785459729152, 0.218104062722737, 0.2166785459729152, 0.21739130434782608, 0.2166785459729152, 0.2166785459729152, 0.5808980755523877, 0.6607270135424091, 0.7783321454027085, 0.796863863150392, 0.8538845331432644, 0.8695652173913043, 0.9080541696364932, 0.9215965787598004, 0.9394155381325731, 0.9458303635067712, 0.9486813970064149, 0.9465431218816821, 0.9422665716322167, 0.9337134711332858, 0.9166072701354241, 0.8987883107626514, 0.8631503920171062, 0.8403421240199572, 0.7868852459016393, 0.7412687099073414, 0.6457590876692801, 0.5787598004276551, 0.32287954383464007, 0.22523164647184604, 0.2209550962223806, 0.21739130434782608, 0.21382751247327156, 0.21454027084818247, 0.21311475409836064, 0.21311475409836064, 0.21168923734853884, 0.21168923734853884, 0.21097647897362795, 0.21097647897362795, 0.21026372059871704, 0.21311475409836064, 0.21382751247327156, 0.21739130434782608, 0.21525302922309336, 0.2915181753385602, 0.20812544547398432, 0.2074126870990734, 0.2074126870990734, 0.2074126870990734, 0.2074126870990734, 0.2074126870990734, 0.2066999287241625, 0.20384889522451888, 0.2052744119743407, 0.2059871703492516, 0.2059871703492516, 0.2066999287241625, 0.2066999287241625, 0.2066999287241625, 0.2059871703492516, 0.2059871703492516, 0.2059871703492516, 0.2059871703492516, 0.2059871703492516, 0.2052744119743407, 0.2059871703492516, 0.2059871703492516, 0.2059871703492516, 0.2066999287241625, 0.2074126870990734, 0.2074126870990734, 0.2074126870990734, 0.20812544547398432, 0.2074126870990734, 0.20883820384889523, 0.2059871703492516, 0.2066999287241625, 0.2066999287241625, 0.2066999287241625, 0.2059871703492516, 0.2059871703492516, 0.2074126870990734, 0.2059871703492516, 0.2059871703492516, 0.2066999287241625, 0.2052744119743407, 0.2059871703492516, 0.2059871703492516, 0.2059871703492516, 0.20955096222380612, 0.23877405559515325, 0.24019957234497505, 0.23877405559515325, 0.23948681397006416, 0.24091233071988596, 0.24091233071988596, 0.24305060584461868, 0.24305060584461868, 0.24376336421952957, 0.2444761225944405, 0.2466143977191732, 0.2466143977191732, 0.2459016393442623, 0.2444761225944405, 0.2444761225944405, 0.24376336421952957, 0.2444761225944405, 0.24376336421952957, 0.2444761225944405, 0.2444761225944405, 0.2444761225944405, 0.2444761225944405, 0.2451888809693514, 0.2459016393442623, 0.2444761225944405, 0.2444761225944405, 0.24305060584461868, 0.35138987883107625, 0.24376336421952957, 0.24305060584461868, 0.24233784746970777, 0.24376336421952957, 0.24875267284390593, 0.25089094796863864, 0.25659301496792586, 0.2594440484675695, 0.2615823235923022, 0.2672843905915894, 0.2722736992159658, 0.3449750534568781, 0.34640057020669995, 0.33927298645759085, 0.3328581610833927, 0.33713471133285816, 0.3421240199572345, 0.33998574483250177, 0.3449750534568781, 0.34853884533143265, 0.35424091233071986, 0.35210263720598717, 0.3449750534568781, 0.3428367783321454, 0.34568781183178904, 0.34568781183178904, 0.34568781183178904, 0.34640057020669995, 0.34640057020669995, 0.3499643620812545, 0.34782608695652173, 0.34568781183178904, 0.3414112615823236, 0.34782608695652173, 0.8146828225231646, 0.9465431218816821, 0.9294369208838203, 0.7662152530292231, 0.3421240199572345, 0.3300071275837491, 0.3378474697077691, 0.33357091945830364, 0.32786885245901637, 0.31860299358517463, 0.315751960085531, 0.30648610121168923, 0.29793300071275836, 0.29508196721311475, 0.2915181753385602, 0.2886671418389166, 0.28367783321454026, 0.28082679971489666, 0.27726300784034213, 0.2722736992159658, 0.26657163221667857, 0.29579472558802566, 0.2736992159657876, 0.25445473984319317, 0.25160370634354956, 0.2466143977191732, 0.24233784746970777, 0.24091233071988596, 0.23378474697077692, 0.22950819672131148, 0.22808267997148968, 0.22594440484675696, 0.22380612972202424, 0.22451888809693513, 0.22380612972202424, 0.22238061297220243, 0.22166785459729152, 0.21881682109764788, 0.22736992159657876, 0.22736992159657876, 0.21525302922309336, 0.21311475409836064, 0.21240199572344975, 0.21240199572344975, 0.21168923734853884, 0.21026372059871704, 0.21026372059871704, 0.21026372059871704, 0.21026372059871704, 0.21026372059871704, 0.20955096222380612, 0.20812544547398432, 0.20812544547398432, 0.20812544547398432, 0.20812544547398432, 0.20812544547398432, 0.2074126870990734, 0.2074126870990734, 0.2074126870990734, 0.2066999287241625, 0.2066999287241625, 0.2059871703492516, 0.2045616535994298, 0.20242337847469707, 0.20242337847469707, 0.20028510334996436, 0.3171774768353528, 0.3036350677120456, 0.2074126870990734, 0.20242337847469707, 0.2045616535994298, 0.2052744119743407, 0.2059871703492516, 0.2059871703492516, 0.2059871703492516, 0.2052744119743407, 0.2052744119743407, 0.2045616535994298, 0.2045616535994298, 0.2045616535994298, 0.2045616535994298, 0.2052744119743407, 0.2066999287241625, 0.2074126870990734, 0.20812544547398432, 0.20812544547398432, 0.21026372059871704, 0.21240199572344975, 0.21382751247327156, 0.21454027084818247, 0.21739130434782608, 0.2166785459729152, 0.2166785459729152, 0.9037776193870278, 0.9037776193870278, 0.9009265858873842, 0.21881682109764788, 0.218104062722737, 0.218104062722737, 0.21881682109764788, 0.2195295794725588, 0.22238061297220243, 0.22451888809693513, 0.22736992159657876, 0.24305060584461868, 0.2758374910905203, 0.3050605844618674, 0.33998574483250177, 0.37633642195295797, 0.4390591589451176, 0.9337134711332858, 0.9301496792587313, 0.46115466856735565, 0.47255880256593014, 0.4796863863150392, 0.48467569493941554, 0.4868139700641482, 0.49607982893799, 0.5003563791874555, 0.5032074126870991, 0.5067712045616536, 0.5081967213114754, 0.5153243050605845, 0.5160370634354954, 0.5167498218104063, 0.5196008553100498, 0.5352815395580898, 0.5773342836778332, 0.6222380612972203, 0.6357804704205274, 0.6450463292943692, 0.6749821810406272, 0.7205987170349252, 0.8866714183891661], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/AIPR.gap.json

@@ -0,0 +1 @@
+{"family": "AIPR", "n_seqs": 257, "length": 418, "gap_rates": [0.20622568093385213, 0.10505836575875487, 0.05058365758754864, 0.04669260700389105, 0.04669260700389105, 0.04669260700389105, 0.04669260700389105, 0.04669260700389105, 0.04669260700389105, 0.05058365758754864, 0.05058365758754864, 0.04669260700389105, 0.04669260700389105, 0.45525291828793774, 0.8638132295719845, 0.04669260700389105, 0.042801556420233464, 0.042801556420233464, 0.042801556420233464, 0.042801556420233464, 0.042801556420233464, 0.038910505836575876, 0.038910505836575876, 0.03501945525291829, 0.03501945525291829, 0.03501945525291829, 0.0311284046692607, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.8249027237354085, 0.6303501945525292, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.038910505836575876, 0.8287937743190662, 0.41245136186770426, 0.3735408560311284, 0.25680933852140075, 0.22568093385214008, 0.4474708171206226, 0.7782101167315175, 0.33073929961089493, 0.22957198443579765, 0.17120622568093385, 0.12840466926070038, 0.04669260700389105, 0.0311284046692607, 0.0311284046692607, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.8988326848249028, 0.9105058365758755, 0.8949416342412452, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.0311284046692607, 0.0311284046692607, 0.0311284046692607, 0.03501945525291829, 0.03501945525291829, 0.0311284046692607, 0.0311284046692607, 0.03501945525291829, 0.03501945525291829, 0.0311284046692607, 0.0311284046692607, 0.05058365758754864, 0.06614785992217899, 0.8054474708171206, 0.914396887159533, 0.5136186770428015, 0.0933852140077821, 0.20233463035019456, 0.17898832684824903, 0.8443579766536965, 0.8988326848249028, 0.9299610894941635, 0.867704280155642, 0.8326848249027238, 0.042801556420233464, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.7509727626459144, 0.8715953307392996, 0.933852140077821, 0.8560311284046692, 0.6186770428015564, 0.45525291828793774, 0.40077821011673154, 0.06614785992217899, 0.06614785992217899, 0.05058365758754864, 0.0311284046692607, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.027237354085603113, 0.023346303501945526, 0.038910505836575876, 0.023346303501945526, 0.023346303501945526, 0.023346303501945526, 0.023346303501945526, 0.023346303501945526, 0.023346303501945526, 0.023346303501945526, 0.023346303501945526, 0.023346303501945526, 0.023346303501945526, 0.023346303501945526, 0.023346303501945526, 0.023346303501945526, 0.023346303501945526, 0.023346303501945526, 0.023346303501945526, 0.023346303501945526, 0.023346303501945526, 0.5291828793774319, 0.6614785992217899, 0.7509727626459144, 0.7626459143968871, 0.7898832684824902, 0.7626459143968871, 0.7587548638132295, 0.688715953307393, 0.6342412451361867, 0.49416342412451364, 0.4396887159533074, 0.38132295719844356, 0.08560311284046693, 0.07392996108949416, 0.04669260700389105, 0.04669260700389105, 0.04669260700389105, 0.04669260700389105, 0.054474708171206226, 0.05058365758754864, 0.9260700389105059, 0.038910505836575876, 0.03501945525291829, 0.0311284046692607, 0.03501945525291829, 0.038910505836575876, 0.03501945525291829, 0.038910505836575876, 0.038910505836575876, 0.058365758754863814, 0.6731517509727627, 0.6770428015564203, 0.6770428015564203, 0.6848249027237354, 0.8171206225680934, 0.8988326848249028, 0.6964980544747081, 0.6770428015564203, 0.6770428015564203, 0.6731517509727627, 0.6653696498054474, 0.6186770428015564, 0.6147859922178989, 0.377431906614786, 0.669260700389105, 0.6848249027237354, 0.5603112840466926, 0.31906614785992216, 0.26459143968871596, 0.19455252918287938, 0.06614785992217899, 0.04669260700389105, 0.038910505836575876, 0.03501945525291829, 0.03501945525291829, 0.03501945525291829, 0.03501945525291829, 0.03501945525291829, 0.03501945525291829, 0.03501945525291829, 0.03501945525291829, 0.03501945525291829, 0.042801556420233464, 0.5136186770428015, 0.04669260700389105, 0.058365758754863814, 0.05058365758754864, 0.058365758754863814, 0.08171206225680934, 0.8443579766536965, 0.8638132295719845, 0.8871595330739299, 0.9105058365758755, 0.9494163424124513, 0.8949416342412452, 0.8754863813229572, 0.8638132295719845, 0.8365758754863813, 0.06614785992217899, 0.0622568093385214, 0.06614785992217899, 0.0622568093385214, 0.0622568093385214, 0.058365758754863814, 0.058365758754863814, 0.058365758754863814, 0.058365758754863814, 0.058365758754863814, 0.7937743190661478, 0.8365758754863813, 0.8910505836575876, 0.8910505836575876, 0.8910505836575876, 0.8560311284046692, 0.8171206225680934, 0.7509727626459144, 0.33073929961089493, 0.3151750972762646, 0.3151750972762646, 0.35019455252918286, 0.3657587548638132, 0.4046692607003891, 0.41245136186770426, 0.48638132295719844, 0.490272373540856, 0.4357976653696498, 0.36186770428015563, 0.31906614785992216, 0.16342412451361868, 0.14007782101167315, 0.12840466926070038, 0.12062256809338522, 0.10116731517509728, 0.10116731517509728, 0.10894941634241245, 0.9416342412451362, 0.8988326848249028, 0.42412451361867703, 0.377431906614786, 0.3463035019455253, 0.3346303501945525, 0.30739299610894943, 0.8910505836575876, 0.9455252918287937, 0.9221789883268483, 0.867704280155642, 0.08171206225680934, 0.07003891050583658, 0.07003891050583658, 0.07003891050583658, 0.07003891050583658, 0.07003891050583658, 0.07003891050583658, 0.07392996108949416, 0.07392996108949416, 0.08171206225680934, 0.08171206225680934, 0.08560311284046693, 0.08949416342412451, 0.0933852140077821, 0.0933852140077821, 0.10116731517509728, 0.10116731517509728, 0.10116731517509728, 0.10116731517509728, 0.10116731517509728, 0.10894941634241245, 0.6498054474708171, 0.9027237354085603, 0.8521400778210116, 0.5992217898832685, 0.15953307392996108, 0.3229571984435798, 0.2723735408560311, 0.23735408560311283, 0.2140077821011673, 0.2490272373540856, 0.7120622568093385, 0.7276264591439688, 0.7626459143968871, 0.7704280155642024, 0.8054474708171206, 0.8171206225680934, 0.8171206225680934, 0.8326848249027238, 0.8326848249027238, 0.8404669260700389, 0.8521400778210116, 0.8599221789883269, 0.8715953307392996, 0.8754863813229572, 0.8793774319066148, 0.8832684824902723, 0.8871595330739299, 0.9299610894941635, 0.9299610894941635, 0.8988326848249028, 0.8832684824902723, 0.8832684824902723, 0.8754863813229572, 0.8754863813229572, 0.8599221789883269, 0.8560311284046692, 0.8443579766536965, 0.8365758754863813, 0.8326848249027238, 0.8210116731517509, 0.8171206225680934, 0.8093385214007782, 0.7976653696498055, 0.7704280155642024, 0.7431906614785992, 0.7198443579766537, 0.7120622568093385, 0.14785992217898833, 0.16731517509727625, 0.16731517509727625, 0.16342412451361868, 0.15953307392996108, 0.15953307392996108, 0.15953307392996108, 0.16342412451361868, 0.17509727626459143, 0.17898832684824903, 0.17898832684824903, 0.1828793774319066, 0.1828793774319066, 0.19066147859922178, 0.19066147859922178, 0.19455252918287938, 0.2178988326848249, 0.23346303501945526, 0.5447470817120622, 0.6731517509727627, 0.7898832684824902, 0.8638132295719845, 0.8949416342412452, 0.9221789883268483, 0.9416342412451362, 0.9105058365758755, 0.8715953307392996, 0.8015564202334631, 0.7120622568093385, 0.5797665369649806, 0.5214007782101168, 0.311284046692607, 0.4280155642023346, 0.4085603112840467, 0.40077821011673154, 0.377431906614786, 0.3735408560311284, 0.3657587548638132, 0.3540856031128405, 0.36964980544747084, 0.377431906614786, 0.3852140077821012, 0.38910505836575876, 0.5097276264591439, 0.9377431906614786, 0.4163424124513619, 0.42023346303501946, 0.4085603112840467, 0.4085603112840467, 0.3968871595330739, 0.4046692607003891, 0.42023346303501946, 0.43190661478599224, 0.45525291828793774, 0.46303501945525294, 0.48249027237354086, 0.4980544747081712, 0.5291828793774319, 0.5525291828793775, 0.5642023346303502, 0.6070038910505836, 0.622568093385214, 0.6575875486381323, 0.7003891050583657, 0.7587548638132295, 0.8443579766536965], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/ANAPC10.gap.json

@@ -0,0 +1 @@
+{"family": "ANAPC10", "n_seqs": 511, "length": 216, "gap_rates": [0.949119373776908, 0.9452054794520548, 0.9354207436399217, 0.9119373776908023, 0.8786692759295499, 0.8688845401174168, 0.8473581213307241, 0.8317025440313112, 0.8140900195694716, 0.7984344422700587, 0.786692759295499, 0.7651663405088063, 0.7436399217221135, 0.7495107632093934, 0.7455968688845401, 0.7084148727984344, 0.9060665362035225, 0.9197651663405088, 0.9373776908023483, 0.9099804305283757, 0.8962818003913894, 0.6614481409001957, 0.5675146771037182, 0.5362035225048923, 0.3913894324853229, 0.3816046966731898, 0.3796477495107632, 0.37181996086105673, 0.3659491193737769, 0.36203522504892366, 0.35812133072407043, 0.3150684931506849, 0.30724070450097846, 0.29354207436399216, 0.2876712328767123, 0.2857142857142857, 0.29354207436399216, 0.29549902152641877, 0.27984344422700586, 0.2857142857142857, 0.2720156555772994, 0.2328767123287671, 0.21135029354207435, 0.162426614481409, 0.1487279843444227, 0.14285714285714285, 0.14285714285714285, 0.14285714285714285, 0.11154598825831702, 0.10176125244618395, 0.09980430528375733, 0.08610567514677103, 0.08023483365949119, 0.07632093933463796, 0.07632093933463796, 0.07436399217221135, 0.07632093933463796, 0.9471624266144814, 0.07827788649706457, 0.07240704500978473, 0.07045009784735812, 0.07240704500978473, 0.9080234833659491, 0.08023483365949119, 0.9178082191780822, 0.07827788649706457, 0.07632093933463796, 0.07240704500978473, 0.07240704500978473, 0.07436399217221135, 0.07632093933463796, 0.07632093933463796, 0.07632093933463796, 0.0821917808219178, 0.08023483365949119, 0.07827788649706457, 0.07045009784735812, 0.0684931506849315, 0.06653620352250489, 0.05870841487279843, 0.05283757338551859, 0.05283757338551859, 0.05283757338551859, 0.05283757338551859, 0.05675146771037182, 0.07240704500978473, 0.12915851272015655, 0.18590998043052837, 0.05870841487279843, 0.05675146771037182, 0.0547945205479452, 0.0547945205479452, 0.05283757338551859, 0.050880626223091974, 0.0547945205479452, 0.050880626223091974, 0.050880626223091974, 0.05283757338551859, 0.0547945205479452, 0.0547945205479452, 0.0547945205479452, 0.05870841487279843, 0.06457925636007827, 0.0684931506849315, 0.07240704500978473, 0.0958904109589041, 0.06262230919765166, 0.06457925636007827, 0.06653620352250489, 0.06457925636007827, 0.06457925636007827, 0.0684931506849315, 0.08023483365949119, 0.08023483365949119, 0.0821917808219178, 0.09197651663405088, 0.08610567514677103, 0.8610567514677103, 0.08414872798434442, 0.10371819960861056, 0.09393346379647749, 0.09980430528375733, 0.1095890410958904, 0.13111545988258316, 0.12524461839530332, 0.12915851272015655, 0.11937377690802348, 0.16829745596868884, 0.13111545988258316, 0.1487279843444227, 0.6712328767123288, 0.7397260273972602, 0.8414872798434442, 0.8786692759295499, 0.8943248532289628, 0.9001956947162426, 0.9060665362035225, 0.9099804305283757, 0.9197651663405088, 0.9295499021526419, 0.9393346379647749, 0.9452054794520548, 0.9471624266144814, 0.9452054794520548, 0.9412915851272016, 0.9373776908023483, 0.923679060665362, 0.9178082191780822, 0.9060665362035225, 0.9021526418786693, 0.898238747553816, 0.8864970645792564, 0.8551859099804305, 0.8160469667318982, 0.7377690802348337, 0.6594911937377691, 0.15655577299412915, 0.8767123287671232, 0.37573385518590996, 0.2974559686888454, 0.24266144814090018, 0.19765166340508805, 0.20743639921722112, 0.20939334637964774, 0.18395303326810175, 0.17221135029354206, 0.18199608610567514, 0.18786692759295498, 0.18590998043052837, 0.18199608610567514, 0.18199608610567514, 0.18786692759295498, 0.18786692759295498, 0.18786692759295498, 0.18786692759295498, 0.18786692759295498, 0.18786692759295498, 0.19373776908023482, 0.1917808219178082, 0.1917808219178082, 0.19373776908023482, 0.19373776908023482, 0.19373776908023482, 0.19569471624266144, 0.19373776908023482, 0.19373776908023482, 0.20156555772994128, 0.2054794520547945, 0.20939334637964774, 0.20939334637964774, 0.2172211350293542, 0.24266144814090018, 0.2896281800391389, 0.3835616438356164, 0.45596868884540115, 0.44031311154598823, 0.47162426614481406, 0.5166340508806262, 0.5616438356164384, 0.6692759295499021, 0.6731898238747553, 0.6731898238747553, 0.6692759295499021, 0.6810176125244618, 0.6986301369863014, 0.7142857142857143, 0.7221135029354208, 0.735812133072407, 0.7416829745596869, 0.7495107632093934, 0.7592954990215264, 0.7690802348336595, 0.786692759295499, 0.812133072407045, 0.8414872798434442, 0.9021526418786693], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/ANAPC3.gap.json

@@ -0,0 +1 @@
+{"family": "ANAPC3", "n_seqs": 1248, "length": 85, "gap_rates": [0.8205128205128205, 0.5745192307692307, 0.390224358974359, 0.3060897435897436, 0.2692307692307692, 0.21314102564102563, 0.20432692307692307, 0.19631410256410256, 0.18830128205128205, 0.1842948717948718, 0.17708333333333334, 0.1658653846153846, 0.1594551282051282, 0.1578525641025641, 0.15544871794871795, 0.1482371794871795, 0.4855769230769231, 0.16826923076923078, 0.12259615384615384, 0.0889423076923077, 0.08092948717948718, 0.06971153846153846, 0.06330128205128205, 0.055288461538461536, 0.05048076923076923, 0.040865384615384616, 0.032852564102564104, 0.026442307692307692, 0.01842948717948718, 0.9447115384615384, 0.9190705128205128, 0.00641025641025641, 0.00641025641025641, 0.005608974358974359, 0.005608974358974359, 0.005608974358974359, 0.005608974358974359, 0.004807692307692308, 0.003205128205128205, 0.003205128205128205, 0.003205128205128205, 0.002403846153846154, 0.002403846153846154, 0.003205128205128205, 0.003205128205128205, 0.003205128205128205, 0.004006410256410256, 0.004006410256410256, 0.004006410256410256, 0.004006410256410256, 0.00641025641025641, 0.4495192307692308, 0.21394230769230768, 0.17868589743589744, 0.11458333333333333, 0.09455128205128205, 0.03766025641025641, 0.03926282051282051, 0.03766025641025641, 0.9375, 0.03926282051282051, 0.03926282051282051, 0.038461538461538464, 0.03926282051282051, 0.04006410256410257, 0.04006410256410257, 0.04006410256410257, 0.04006410256410257, 0.040865384615384616, 0.041666666666666664, 0.04326923076923077, 0.04487179487179487, 0.04487179487179487, 0.04567307692307692, 0.046474358974358976, 0.052884615384615384, 0.055288461538461536, 0.05929487179487179, 0.0641025641025641, 0.07371794871794872, 0.09615384615384616, 0.1233974358974359, 0.15544871794871795, 0.24358974358974358, 0.46634615384615385], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/APG17.gap.json

@@ -0,0 +1 @@
+{"family": "APG17", "n_seqs": 207, "length": 522, "gap_rates": [0.6956521739130435, 0.5072463768115942, 0.4830917874396135, 0.47342995169082125, 0.463768115942029, 0.45410628019323673, 0.45410628019323673, 0.45410628019323673, 0.45410628019323673, 0.45410628019323673, 0.45410628019323673, 0.7536231884057971, 0.4492753623188406, 0.4444444444444444, 0.4396135265700483, 0.41545893719806765, 0.41545893719806765, 0.40096618357487923, 0.40096618357487923, 0.40096618357487923, 0.3961352657004831, 0.3961352657004831, 0.391304347826087, 0.391304347826087, 0.391304347826087, 0.38164251207729466, 0.37681159420289856, 0.37681159420289856, 0.37681159420289856, 0.3671497584541063, 0.36231884057971014, 0.357487922705314, 0.357487922705314, 0.3526570048309179, 0.3526570048309179, 0.3526570048309179, 0.3526570048309179, 0.3526570048309179, 0.3526570048309179, 0.3526570048309179, 0.3526570048309179, 0.3526570048309179, 0.34782608695652173, 0.34782608695652173, 0.34782608695652173, 0.34299516908212563, 0.33816425120772947, 0.33816425120772947, 0.33816425120772947, 0.33816425120772947, 0.33816425120772947, 0.3333333333333333, 0.3333333333333333, 0.3285024154589372, 0.3333333333333333, 0.3333333333333333, 0.3333333333333333, 0.3333333333333333, 0.3333333333333333, 0.3333333333333333, 0.3333333333333333, 0.34299516908212563, 0.3526570048309179, 0.357487922705314, 0.3526570048309179, 0.3526570048309179, 0.927536231884058, 0.33816425120772947, 0.34299516908212563, 0.34299516908212563, 0.34299516908212563, 0.3333333333333333, 0.3285024154589372, 0.3285024154589372, 0.32367149758454106, 0.3285024154589372, 0.3285024154589372, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.3188405797101449, 0.3188405797101449, 0.3188405797101449, 0.3188405797101449, 0.3333333333333333, 0.3333333333333333, 0.3333333333333333, 0.33816425120772947, 0.3333333333333333, 0.4492753623188406, 0.34299516908212563, 0.6908212560386473, 0.7391304347826086, 0.7584541062801933, 0.7681159420289855, 0.7922705314009661, 0.821256038647343, 0.8454106280193237, 0.855072463768116, 0.8599033816425121, 0.8647342995169082, 0.8647342995169082, 0.8647342995169082, 0.8647342995169082, 0.8647342995169082, 0.8743961352657005, 0.8792270531400966, 0.8792270531400966, 0.8792270531400966, 0.8792270531400966, 0.893719806763285, 0.8985507246376812, 0.8985507246376812, 0.9033816425120773, 0.9130434782608695, 0.9323671497584541, 0.9371980676328503, 0.927536231884058, 0.9082125603864735, 0.8985507246376812, 0.8985507246376812, 0.8985507246376812, 0.8840579710144928, 0.8792270531400966, 0.8792270531400966, 0.8792270531400966, 0.8792270531400966, 0.8647342995169082, 0.8647342995169082, 0.8647342995169082, 0.8647342995169082, 0.8647342995169082, 0.8647342995169082, 0.8599033816425121, 0.855072463768116, 0.8405797101449275, 0.8019323671497585, 0.782608695652174, 0.7632850241545893, 0.748792270531401, 0.7246376811594203, 0.463768115942029, 0.3333333333333333, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.3188405797101449, 0.3188405797101449, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.3333333333333333, 0.3333333333333333, 0.3333333333333333, 0.3333333333333333, 0.3333333333333333, 0.3333333333333333, 0.3333333333333333, 0.32367149758454106, 0.8888888888888888, 0.9033816425120773, 0.9082125603864735, 0.9323671497584541, 0.9468599033816425, 0.9371980676328503, 0.9130434782608695, 0.9082125603864735, 0.893719806763285, 0.8888888888888888, 0.32367149758454106, 0.3285024154589372, 0.32367149758454106, 0.3285024154589372, 0.3285024154589372, 0.32367149758454106, 0.32367149758454106, 0.3188405797101449, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.32367149758454106, 0.3285024154589372, 0.3285024154589372, 0.34782608695652173, 0.3526570048309179, 0.3333333333333333, 0.34299516908212563, 0.33816425120772947, 0.33816425120772947, 0.33816425120772947, 0.33816425120772947, 0.34299516908212563, 0.34782608695652173, 0.34782608695652173, 0.34782608695652173, 0.33816425120772947, 0.5458937198067633, 0.6231884057971014, 0.7584541062801933, 0.821256038647343, 0.8309178743961353, 0.8647342995169082, 0.8840579710144928, 0.893719806763285, 0.9082125603864735, 0.9178743961352657, 0.927536231884058, 0.9130434782608695, 0.8985507246376812, 0.893719806763285, 0.8743961352657005, 0.855072463768116, 0.8309178743961353, 0.7971014492753623, 0.6859903381642513, 0.5652173913043478, 0.5217391304347826, 0.357487922705314, 0.6618357487922706, 0.6135265700483091, 0.5265700483091788, 0.5072463768115942, 0.4444444444444444, 0.37681159420289856, 0.9082125603864735, 0.821256038647343, 0.357487922705314, 0.357487922705314, 0.34782608695652173, 0.34299516908212563, 0.34782608695652173, 0.34782608695652173, 0.34782608695652173, 0.34782608695652173, 0.3526570048309179, 0.3526570048309179, 0.357487922705314, 0.3526570048309179, 0.3526570048309179, 0.3526570048309179, 0.36231884057971014, 0.3671497584541063, 0.3671497584541063, 0.3671497584541063, 0.3719806763285024, 0.37681159420289856, 0.38164251207729466, 0.38164251207729466, 0.38164251207729466, 0.3864734299516908, 0.3864734299516908, 0.3864734299516908, 0.3864734299516908, 0.3864734299516908, 0.3961352657004831, 0.40096618357487923, 0.40096618357487923, 0.3961352657004831, 0.3961352657004831, 0.391304347826087, 0.391304347826087, 0.391304347826087, 0.391304347826087, 0.4106280193236715, 0.41545893719806765, 0.42995169082125606, 0.43478260869565216, 0.4251207729468599, 0.42028985507246375, 0.42995169082125606, 0.45410628019323673, 0.4927536231884058, 0.6811594202898551, 0.7391304347826086, 0.6570048309178744, 0.6280193236714976, 0.6666666666666666, 0.7053140096618358, 0.6859903381642513, 0.5797101449275363, 0.6811594202898551, 0.6859903381642513, 0.6908212560386473, 0.6908212560386473, 0.7004830917874396, 0.7004830917874396, 0.7004830917874396, 0.7004830917874396, 0.7101449275362319, 0.7246376811594203, 0.7391304347826086, 0.7584541062801933, 0.782608695652174, 0.8405797101449275, 0.9227053140096618, 0.9371980676328503, 0.893719806763285, 0.821256038647343, 0.7729468599033816, 0.7439613526570048, 0.7294685990338164, 0.7198067632850241, 0.7101449275362319, 0.7004830917874396, 0.7004830917874396, 0.7004830917874396, 0.6908212560386473, 0.6908212560386473, 0.6908212560386473, 0.6859903381642513, 0.6763285024154589, 0.4975845410628019, 0.4830917874396135, 0.463768115942029, 0.45410628019323673, 0.4444444444444444, 0.5507246376811594, 0.5362318840579711, 0.5314009661835749, 0.5314009661835749, 0.3719806763285024, 0.3671497584541063, 0.3671497584541063, 0.3719806763285024, 0.3719806763285024, 0.3671497584541063, 0.357487922705314, 0.357487922705314, 0.357487922705314, 0.34782608695652173, 0.34299516908212563, 0.33816425120772947, 0.33816425120772947, 0.3333333333333333, 0.32367149758454106, 0.3285024154589372, 0.32367149758454106, 0.3188405797101449, 0.3140096618357488, 0.30917874396135264, 0.30434782608695654, 0.2995169082125604, 0.2995169082125604, 0.2995169082125604, 0.2898550724637681, 0.8985507246376812, 0.9082125603864735, 0.9033816425120773, 0.8840579710144928, 0.27053140096618356, 0.27053140096618356, 0.27053140096618356, 0.26570048309178745, 0.2608695652173913, 0.25120772946859904, 0.23671497584541062, 0.23671497584541062, 0.2318840579710145, 0.22705314009661837, 0.2318840579710145, 0.22705314009661837, 0.22705314009661837, 0.2222222222222222, 0.21739130434782608, 0.19806763285024154, 0.1932367149758454, 0.1932367149758454, 0.1932367149758454, 0.18840579710144928, 0.18357487922705315, 0.18357487922705315, 0.18357487922705315, 0.18357487922705315, 0.18357487922705315, 0.18357487922705315, 0.18357487922705315, 0.18357487922705315, 0.18357487922705315, 0.2753623188405797, 0.2560386473429952, 0.7971014492753623, 0.2560386473429952, 0.21256038647342995, 0.16908212560386474, 0.1642512077294686, 0.16908212560386474, 0.16908212560386474, 0.1642512077294686, 0.1642512077294686, 0.1642512077294686, 0.7536231884057971, 0.7198067632850241, 0.6859903381642513, 0.17391304347826086, 0.16908212560386474, 0.16908212560386474, 0.1642512077294686, 0.16908212560386474, 0.16908212560386474, 0.16908212560386474, 0.1642512077294686, 0.9371980676328503, 0.9420289855072463, 0.9371980676328503, 0.9323671497584541, 0.2753623188405797, 0.2608695652173913, 0.2560386473429952, 0.17391304347826086, 0.17391304347826086, 0.16908212560386474, 0.16908212560386474, 0.1642512077294686, 0.1642512077294686, 0.1642512077294686, 0.15942028985507245, 0.15942028985507245, 0.15942028985507245, 0.1642512077294686, 0.1642512077294686, 0.16908212560386474, 0.16908212560386474, 0.16908212560386474, 0.18357487922705315, 0.23671497584541062, 0.21256038647342995, 0.22705314009661837, 0.18840579710144928, 0.1932367149758454, 0.1932367149758454, 0.16908212560386474, 0.14492753623188406, 0.13043478260869565, 0.13043478260869565, 0.13043478260869565, 0.13043478260869565, 0.13043478260869565, 0.13043478260869565, 0.13043478260869565, 0.13043478260869565, 0.13043478260869565, 0.14009661835748793, 0.14009661835748793, 0.13526570048309178, 0.13526570048309178, 0.13526570048309178, 0.14009661835748793, 0.14492753623188406, 0.14009661835748793, 0.14009661835748793, 0.18357487922705315, 0.178743961352657, 0.14492753623188406, 0.14492753623188406, 0.13526570048309178, 0.14009661835748793, 0.13526570048309178, 0.13526570048309178, 0.14009661835748793, 0.14009661835748793, 0.14009661835748793, 0.14009661835748793, 0.14009661835748793, 0.14009661835748793, 0.14009661835748793, 0.14009661835748793, 0.1497584541062802, 0.16908212560386474, 0.16908212560386474, 0.16908212560386474, 0.16908212560386474, 0.16908212560386474, 0.16908212560386474, 0.16908212560386474, 0.16908212560386474, 0.16908212560386474, 0.17391304347826086, 0.17391304347826086, 0.17391304347826086, 0.17391304347826086, 0.17391304347826086, 0.178743961352657, 0.178743961352657, 0.18357487922705315, 0.20772946859903382, 0.21256038647342995, 0.21739130434782608, 0.22705314009661837, 0.23671497584541062, 0.25120772946859904, 0.30434782608695654, 0.3188405797101449, 0.4444444444444444, 0.5120772946859904, 0.6038647342995169, 0.7391304347826086], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/APH.gap.json

@@ -0,0 +1 @@
+{"family": "APH", "n_seqs": 5000, "length": 339, "gap_rates": [0.8052, 0.7108, 0.6568, 0.6214, 0.5896, 0.5556, 0.5688, 0.5194, 0.5054, 0.49, 0.4866, 0.4654, 0.4558, 0.4462, 0.4364, 0.4334, 0.4254, 0.4704, 0.4624, 0.7722, 0.4422, 0.9246, 0.9464, 0.8512, 0.381, 0.369, 0.3612, 0.3566, 0.354, 0.3534, 0.3504, 0.3522, 0.3496, 0.3488, 0.8054, 0.9456, 0.8574, 0.713, 0.5222, 0.4212, 0.347, 0.3208, 0.3042, 0.2878, 0.2774, 0.2642, 0.2518, 0.249, 0.2464, 0.2324, 0.2282, 0.2226, 0.2196, 0.2214, 0.2166, 0.935, 0.2136, 0.2094, 0.256, 0.2066, 0.8282, 0.9298, 0.8958, 0.6938, 0.2372, 0.1964, 0.2026, 0.194, 0.192, 0.1898, 0.9318, 0.9396, 0.9268, 0.1904, 0.4628, 0.4722, 0.9338, 0.4156, 0.2914, 0.2732, 0.2184, 0.2114, 0.208, 0.2176, 0.264, 0.8068, 0.8562, 0.9028, 0.9496, 0.9318, 0.8784, 0.8282, 0.7812, 0.2448, 0.1908, 0.1748, 0.1638, 0.1594, 0.1572, 0.1564, 0.1664, 0.1632, 0.1556, 0.1542, 0.1538, 0.1528, 0.1526, 0.151, 0.587, 0.7804, 0.9086, 0.859, 0.6612, 0.5284, 0.4608, 0.405, 0.379, 0.3072, 0.2798, 0.1912, 0.1662, 0.1534, 0.148, 0.1444, 0.1406, 0.1382, 0.1316, 0.1272, 0.127, 0.1262, 0.1258, 0.125, 0.1246, 0.9454, 0.9478, 0.9496, 0.9464, 0.9436, 0.1248, 0.137, 0.1408, 0.139, 0.1388, 0.9466, 0.9482, 0.9466, 0.3424, 0.8516, 0.2872, 0.2522, 0.9398, 0.95, 0.9338, 0.2214, 0.1862, 0.1686, 0.161, 0.1332, 0.8764, 0.885, 0.8922, 0.9012, 0.9108, 0.9192, 0.9286, 0.9368, 0.9414, 0.9476, 0.9446, 0.9388, 0.9328, 0.9246, 0.9144, 0.9046, 0.8968, 0.8886, 0.8802, 0.8726, 0.1326, 0.1488, 0.15, 0.226, 0.205, 0.2262, 0.1616, 0.1504, 0.1458, 0.1344, 0.9484, 0.9426, 0.1326, 0.1332, 0.1302, 0.1282, 0.1292, 0.1326, 0.3448, 0.3634, 0.8334, 0.2218, 0.1808, 0.16, 0.147, 0.1438, 0.136, 0.137, 0.1432, 0.15, 0.7976, 0.9222, 0.949, 0.8728, 0.6672, 0.5012, 0.2948, 0.2446, 0.1718, 0.1536, 0.1496, 0.1466, 0.515, 0.8438, 0.872, 0.8946, 0.9118, 0.9298, 0.945, 0.9374, 0.9216, 0.9014, 0.8864, 0.8598, 0.8344, 0.1364, 0.1092, 0.0926, 0.088, 0.083, 0.0792, 0.0838, 0.09, 0.0996, 0.1134, 0.3052, 0.6434, 0.7774, 0.849, 0.9084, 0.9464, 0.9318, 0.8852, 0.8266, 0.7146, 0.5678, 0.2574, 0.1224, 0.061, 0.0282, 0.0236, 0.0218, 0.0208, 0.0212, 0.0204, 0.0202, 0.0202, 0.0206, 0.0214, 0.0212, 0.0212, 0.021, 0.0208, 0.021, 0.021, 0.8844, 0.9466, 0.915, 0.8244, 0.53, 0.2912, 0.061, 0.0274, 0.0288, 0.102, 0.4308, 0.2094, 0.0268, 0.0248, 0.025, 0.0272, 0.0302, 0.0378, 0.0422, 0.0504, 0.0636, 0.0772, 0.0908, 0.113, 0.1386, 0.149, 0.1578, 0.165, 0.1748, 0.1838, 0.191, 0.1996, 0.9002, 0.942, 0.9254, 0.8814, 0.3882, 0.3068, 0.8816, 0.4218, 0.378, 0.4226, 0.4136, 0.3956, 0.4026, 0.432, 0.455, 0.4684, 0.484, 0.5004, 0.5174, 0.531, 0.5488, 0.5664, 0.5842, 0.6014, 0.65, 0.8906, 0.892, 0.8032, 0.8182, 0.8352, 0.8576, 0.8786, 0.8974, 0.9184], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/ARID.gap.json

@@ -0,0 +1 @@
+{"family": "ARID", "n_seqs": 1440, "length": 97, "gap_rates": [0.9006944444444445, 0.48819444444444443, 0.30069444444444443, 0.19444444444444445, 0.1638888888888889, 0.14652777777777778, 0.12708333333333333, 0.11736111111111111, 0.10833333333333334, 0.10486111111111111, 0.10277777777777777, 0.10069444444444445, 0.09583333333333334, 0.09375, 0.09513888888888888, 0.09652777777777778, 0.08263888888888889, 0.07708333333333334, 0.29583333333333334, 0.07777777777777778, 0.9493055555555555, 0.8243055555555555, 0.22361111111111112, 0.07708333333333334, 0.05416666666666667, 0.044444444444444446, 0.9465277777777777, 0.9388888888888889, 0.03888888888888889, 0.03680555555555556, 0.02847222222222222, 0.017361111111111112, 0.015277777777777777, 0.015277777777777777, 0.013194444444444444, 0.013194444444444444, 0.011805555555555555, 0.011111111111111112, 0.009027777777777777, 0.007638888888888889, 0.006944444444444444, 0.005555555555555556, 0.004861111111111111, 0.002777777777777778, 0.002777777777777778, 0.0125, 0.010416666666666666, 0.011805555555555555, 0.011111111111111112, 0.005555555555555556, 0.004861111111111111, 0.00625, 0.0125, 0.06597222222222222, 0.027777777777777776, 0.93125, 0.030555555555555555, 0.03611111111111111, 0.03333333333333333, 0.02013888888888889, 0.020833333333333332, 0.020833333333333332, 0.020833333333333332, 0.022222222222222223, 0.022222222222222223, 0.022222222222222223, 0.022916666666666665, 0.03819444444444445, 0.029166666666666667, 0.03611111111111111, 0.11180555555555556, 0.29791666666666666, 0.4861111111111111, 0.8694444444444445, 0.9263888888888889, 0.7590277777777777, 0.3763888888888889, 0.1423611111111111, 0.8743055555555556, 0.06180555555555556, 0.04861111111111111, 0.03958333333333333, 0.0375, 0.03611111111111111, 0.035416666666666666, 0.034722222222222224, 0.04375, 0.04513888888888889, 0.04513888888888889, 0.04583333333333333, 0.04861111111111111, 0.05694444444444444, 0.0625, 0.06527777777777778, 0.08263888888888889, 0.1, 0.18472222222222223], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/ATG_C.gap.json

@@ -0,0 +1 @@
+{"family": "ATG_C", "n_seqs": 471, "length": 97, "gap_rates": [0.7876857749469215, 0.6687898089171974, 0.45222929936305734, 0.2526539278131635, 0.17197452229299362, 0.11464968152866242, 0.07855626326963906, 0.07430997876857749, 0.036093418259023353, 0.01910828025477707, 0.014861995753715499, 0.012738853503184714, 0.012738853503184714, 0.012738853503184714, 0.012738853503184714, 0.012738853503184714, 0.012738853503184714, 0.012738853503184714, 0.012738853503184714, 0.012738853503184714, 0.012738853503184714, 0.012738853503184714, 0.012738853503184714, 0.008492569002123142, 0.008492569002123142, 0.008492569002123142, 0.008492569002123142, 0.004246284501061571, 0.0021231422505307855, 0.010615711252653927, 0.0021231422505307855, 0.0021231422505307855, 0.004246284501061571, 0.0021231422505307855, 0.004246284501061571, 0.004246284501061571, 0.004246284501061571, 0.0021231422505307855, 0.0021231422505307855, 0.016985138004246284, 0.04246284501061571, 0.04246284501061571, 0.027600849256900213, 0.8938428874734607, 0.02335456475583864, 0.025477707006369428, 0.02335456475583864, 0.006369426751592357, 0.004246284501061571, 0.004246284501061571, 0.004246284501061571, 0.006369426751592357, 0.004246284501061571, 0.004246284501061571, 0.0021231422505307855, 0.0021231422505307855, 0.0021231422505307855, 0.0021231422505307855, 0.0021231422505307855, 0.0021231422505307855, 0.0021231422505307855, 0.0021231422505307855, 0.0021231422505307855, 0.0021231422505307855, 0.0021231422505307855, 0.0021231422505307855, 0.0021231422505307855, 0.0021231422505307855, 0.0021231422505307855, 0.0021231422505307855, 0.0021231422505307855, 0.004246284501061571, 0.006369426751592357, 0.006369426751592357, 0.006369426751592357, 0.006369426751592357, 0.006369426751592357, 0.006369426751592357, 0.006369426751592357, 0.006369426751592357, 0.006369426751592357, 0.008492569002123142, 0.025477707006369428, 0.07643312101910828, 0.2611464968152866, 0.29723991507430997, 0.3184713375796178, 0.3630573248407643, 0.38004246284501064, 0.39278131634819535, 0.43312101910828027, 0.445859872611465, 0.44798301486199577, 0.46709129511677283, 0.4861995753715499, 0.4883227176220807, 0.5668789808917197], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/ATP-grasp.gap.json

@@ -0,0 +1 @@
+{"family": "ATP-grasp", "n_seqs": 1852, "length": 186, "gap_rates": [0.34557235421166305, 0.13876889848812096, 0.0826133909287257, 0.06911447084233262, 0.06479481641468683, 0.058855291576673865, 0.056155507559395246, 0.05075593952483801, 0.04913606911447084, 0.048056155507559394, 0.047516198704103674, 0.04643628509719223, 0.044816414686825054, 0.04427645788336933, 0.04265658747300216, 0.04103671706263499, 0.058855291576673865, 0.9416846652267818, 0.9146868250539957, 0.05129589632829374, 0.04697624190064795, 0.044816414686825054, 0.04427645788336933, 0.041576673866090715, 0.06803455723542116, 0.050215982721382287, 0.03833693304535637, 0.036177105831533475, 0.061555075593952485, 0.02267818574514039, 0.025377969762419007, 0.0183585313174946, 0.017278617710583154, 0.017278617710583154, 0.01673866090712743, 0.26727861771058314, 0.01997840172786177, 0.01997840172786177, 0.018898488120950324, 0.017818574514038878, 0.017818574514038878, 0.01673866090712743, 0.017818574514038878, 0.017278617710583154, 0.018898488120950324, 0.0183585313174946, 0.018898488120950324, 0.0183585313174946, 0.0183585313174946, 0.017818574514038878, 0.019438444924406047, 0.018898488120950324, 0.018898488120950324, 0.021058315334773217, 0.023758099352051837, 0.023218142548596114, 0.023218142548596114, 0.023218142548596114, 0.026457883369330453, 0.03023758099352052, 0.038876889848812095, 0.04319654427645788, 0.5950323974082073, 0.7073434125269978, 0.7516198704103672, 0.7375809935205183, 0.6916846652267818, 0.5529157667386609, 0.15442764578833693, 0.117170626349892, 0.06911447084233262, 0.05939524838012959, 0.017278617710583154, 0.017278617710583154, 0.017278617710583154, 0.017278617710583154, 0.01673866090712743, 0.016198704103671708, 0.01673866090712743, 0.0183585313174946, 0.024838012958963283, 0.023758099352051837, 0.023758099352051837, 0.024838012958963283, 0.02429805615550756, 0.023758099352051837, 0.024838012958963283, 0.023758099352051837, 0.023758099352051837, 0.023758099352051837, 0.025377969762419007, 0.9136069114470843, 0.906047516198704, 0.02429805615550756, 0.028077753779697623, 0.02591792656587473, 0.028617710583153346, 0.17278617710583152, 0.9136069114470843, 0.9055075593952484, 0.0275377969762419, 0.026997840172786176, 0.0275377969762419, 0.028617710583153346, 0.028617710583153346, 0.0275377969762419, 0.028617710583153346, 0.028077753779697623, 0.028077753779697623, 0.0275377969762419, 0.028077753779697623, 0.0275377969762419, 0.0275377969762419, 0.026457883369330453, 0.026457883369330453, 0.02591792656587473, 0.02591792656587473, 0.026997840172786176, 0.026457883369330453, 0.026457883369330453, 0.0275377969762419, 0.03509719222462203, 0.032937365010799136, 0.042116630669546434, 0.8909287257019438, 0.0458963282937365, 0.032397408207343416, 0.03995680345572354, 0.03725701943844492, 0.9346652267818575, 0.028077753779697623, 0.026997840172786176, 0.022138228941684664, 0.022138228941684664, 0.022138228941684664, 0.022138228941684664, 0.022138228941684664, 0.02267818574514039, 0.02267818574514039, 0.02267818574514039, 0.023218142548596114, 0.023758099352051837, 0.023758099352051837, 0.023758099352051837, 0.023758099352051837, 0.023758099352051837, 0.023218142548596114, 0.02429805615550756, 0.02429805615550756, 0.02429805615550756, 0.025377969762419007, 0.02591792656587473, 0.02591792656587473, 0.026457883369330453, 0.02591792656587473, 0.024838012958963283, 0.024838012958963283, 0.024838012958963283, 0.02429805615550756, 0.31965442764578833, 0.20140388768898487, 0.03131749460043196, 0.09341252699784017, 0.9352051835853131, 0.7494600431965442, 0.03401727861771058, 0.028617710583153346, 0.029697624190064796, 0.03131749460043196, 0.03455723542116631, 0.0367170626349892, 0.03995680345572354, 0.041576673866090715, 0.04697624190064795, 0.0550755939524838, 0.058855291576673865, 0.05939524838012959, 0.05939524838012959, 0.06047516198704104, 0.06263498920086392, 0.06911447084233262, 0.0755939524838013, 0.07829373650107992, 0.08801295896328294, 0.10205183585313175, 0.33585313174946], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/ATP-sulfurylase.gap.json

@@ -0,0 +1 @@
+{"family": "ATP-sulfurylase", "n_seqs": 887, "length": 236, "gap_rates": [0.8500563697857948, 0.46561443066516345, 0.24239007891770012, 0.14994363021420518, 0.08680947012401354, 0.0665163472378805, 0.060879368658399095, 0.05975197294250282, 0.058624577226606536, 0.05636978579481398, 0.05636978579481398, 0.0552423900789177, 0.0552423900789177, 0.05298759864712514, 0.08568207440811725, 0.08455467869222097, 0.060879368658399095, 0.05186020293122886, 0.0496054114994363, 0.04735062006764374, 0.048478015783540024, 0.046223224351747465, 0.046223224351747465, 0.046223224351747465, 0.046223224351747465, 0.046223224351747465, 0.04509582863585118, 0.04509582863585118, 0.04509582863585118, 0.04509582863585118, 0.043968432919954906, 0.043968432919954906, 0.04735062006764374, 0.04735062006764374, 0.043968432919954906, 0.043968432919954906, 0.043968432919954906, 0.04284103720405862, 0.04171364148816235, 0.04171364148816235, 0.04171364148816235, 0.04284103720405862, 0.04284103720405862, 0.043968432919954906, 0.37993235625704624, 0.8072153325817362, 0.4047350620067644, 0.060879368658399095, 0.0496054114994363, 0.06200676437429538, 0.31679819616685456, 0.7282976324689966, 0.7564825253664036, 0.9210822998872604, 0.7294250281848929, 0.7113866967305524, 0.043968432919954906, 0.040586245772266064, 0.03945885005636979, 0.040586245772266064, 0.04284103720405862, 0.04284103720405862, 0.04284103720405862, 0.040586245772266064, 0.040586245772266064, 0.04509582863585118, 0.040586245772266064, 0.040586245772266064, 0.03945885005636979, 0.03945885005636979, 0.03945885005636979, 0.038331454340473504, 0.038331454340473504, 0.03720405862457723, 0.03720405862457723, 0.03720405862457723, 0.03945885005636979, 0.03945885005636979, 0.038331454340473504, 0.03720405862457723, 0.03720405862457723, 0.03720405862457723, 0.03720405862457723, 0.03494926719278467, 0.03494926719278467, 0.03720405862457723, 0.741826381059752, 0.34498308906426156, 0.038331454340473504, 0.03720405862457723, 0.03720405862457723, 0.036076662908680945, 0.04509582863585118, 0.03720405862457723, 0.03720405862457723, 0.038331454340473504, 0.03720405862457723, 0.036076662908680945, 0.036076662908680945, 0.03494926719278467, 0.033821871476888386, 0.033821871476888386, 0.03156708004509583, 0.03156708004509583, 0.03269447576099211, 0.03269447576099211, 0.03269447576099211, 0.03156708004509583, 0.03269447576099211, 0.03269447576099211, 0.03494926719278467, 0.03494926719278467, 0.03494926719278467, 0.03494926719278467, 0.03494926719278467, 0.03494926719278467, 0.03494926719278467, 0.036076662908680945, 0.036076662908680945, 0.03720405862457723, 0.03720405862457723, 0.038331454340473504, 0.038331454340473504, 0.038331454340473504, 0.038331454340473504, 0.038331454340473504, 0.038331454340473504, 0.040586245772266064, 0.043968432919954906, 0.04284103720405862, 0.043968432919954906, 0.043968432919954906, 0.04284103720405862, 0.04735062006764374, 0.04735062006764374, 0.04735062006764374, 0.04509582863585118, 0.45659526493799324, 0.45659526493799324, 0.46674182638105977, 0.9481397970687712, 0.9188275084554679, 0.45659526493799324, 0.45659526493799324, 0.45434047350620066, 0.0496054114994363, 0.048478015783540024, 0.048478015783540024, 0.048478015783540024, 0.048478015783540024, 0.046223224351747465, 0.046223224351747465, 0.046223224351747465, 0.04735062006764374, 0.048478015783540024, 0.048478015783540024, 0.048478015783540024, 0.046223224351747465, 0.046223224351747465, 0.043968432919954906, 0.08680947012401354, 0.06426155580608793, 0.939120631341601, 0.9470124013528749, 0.9492671927846674, 0.9481397970687712, 0.9470124013528749, 0.7158962795941376, 0.043968432919954906, 0.04284103720405862, 0.04171364148816235, 0.04171364148816235, 0.04171364148816235, 0.040586245772266064, 0.040586245772266064, 0.040586245772266064, 0.040586245772266064, 0.04284103720405862, 0.043968432919954906, 0.043968432919954906, 0.043968432919954906, 0.043968432919954906, 0.043968432919954906, 0.043968432919954906, 0.043968432919954906, 0.043968432919954906, 0.04735062006764374, 0.043968432919954906, 0.0552423900789177, 0.11161217587373168, 0.2491544532130778, 0.16234498308906425, 0.09019165727170236, 0.06426155580608793, 0.9098083427282976, 0.3788049605411499, 0.048478015783540024, 0.04735062006764374, 0.05186020293122886, 0.048478015783540024, 0.04509582863585118, 0.04509582863585118, 0.04509582863585118, 0.04509582863585118, 0.04509582863585118, 0.04509582863585118, 0.04509582863585118, 0.04509582863585118, 0.043968432919954906, 0.04509582863585118, 0.04735062006764374, 0.048478015783540024, 0.048478015783540024, 0.048478015783540024, 0.0496054114994363, 0.05073280721533258, 0.05073280721533258, 0.05073280721533258, 0.0552423900789177, 0.05636978579481398, 0.06200676437429538, 0.06426155580608793, 0.06313416009019165, 0.06426155580608793, 0.06426155580608793, 0.06426155580608793, 0.0665163472378805, 0.06877113866967305, 0.07102593010146561, 0.07215332581736189, 0.07215332581736189, 0.07440811724915446, 0.08004509582863585, 0.09244644870349493, 0.19503945885005636, 0.8489289740698985], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/ATP-synt_D.gap.json

@@ -0,0 +1 @@
+{"family": "ATP-synt_D", "n_seqs": 773, "length": 200, "gap_rates": [0.5433376455368694, 0.26002587322121606, 0.18628719275549807, 0.1203104786545925, 0.0815006468305304, 0.08020698576972833, 0.07761966364812418, 0.07632600258732213, 0.07632600258732213, 0.07632600258732213, 0.07632600258732213, 0.07503234152652005, 0.07373868046571798, 0.0724450194049159, 0.0724450194049159, 0.07115135834411385, 0.07115135834411385, 0.07115135834411385, 0.06985769728331177, 0.06985769728331177, 0.06985769728331177, 0.06985769728331177, 0.07503234152652005, 0.07503234152652005, 0.07503234152652005, 0.07503234152652005, 0.07503234152652005, 0.07503234152652005, 0.07632600258732213, 0.07503234152652005, 0.07373868046571798, 0.06597671410090557, 0.0646830530401035, 0.0646830530401035, 0.0646830530401035, 0.06338939197930142, 0.06338939197930142, 0.06338939197930142, 0.062095730918499355, 0.0685640362225097, 0.06338939197930142, 0.059508408796895215, 0.05821474773609314, 0.04398447606727038, 0.04398447606727038, 0.042690815006468305, 0.042690815006468305, 0.04139715394566624, 0.04139715394566624, 0.04139715394566624, 0.04139715394566624, 0.04139715394566624, 0.04139715394566624, 0.04139715394566624, 0.04139715394566624, 0.042690815006468305, 0.16946959896507116, 0.1630012936610608, 0.5433376455368694, 0.1539456662354463, 0.1500646830530401, 0.04657179818887452, 0.04657179818887452, 0.4890038809831824, 0.5200517464424321, 0.3648124191461837, 0.0815006468305304, 0.07373868046571798, 0.07373868046571798, 0.15653298835705046, 0.15653298835705046, 0.1539456662354463, 0.1630012936610608, 0.24708926261319533, 0.12677878395860284, 0.111254851228978, 0.17076326002587322, 0.4036222509702458, 0.37645536869340235, 0.19016817593790428, 0.5730918499353169, 0.03622250970245795, 0.03492884864165589, 0.03234152652005175, 0.03234152652005175, 0.03363518758085381, 0.03492884864165589, 0.03363518758085381, 0.03363518758085381, 0.03363518758085381, 0.03492884864165589, 0.03492884864165589, 0.037516170763260026, 0.037516170763260026, 0.037516170763260026, 0.037516170763260026, 0.037516170763260026, 0.037516170763260026, 0.040103492884864166, 0.04657179818887452, 0.062095730918499355, 0.13971539456662355, 0.17852522639068563, 0.32470892626131953, 0.8279430789133247, 0.9197930142302717, 0.6093143596377749, 0.24579560155239327, 0.1384217335058215, 0.08020698576972833, 0.0815006468305304, 0.07373868046571798, 0.062095730918499355, 0.056921086675291076, 0.047865459249676584, 0.047865459249676584, 0.045278137128072445, 0.040103492884864166, 0.03880983182406209, 0.037516170763260026, 0.03622250970245795, 0.03622250970245795, 0.03622250970245795, 0.03622250970245795, 0.037516170763260026, 0.03880983182406209, 0.03622250970245795, 0.037516170763260026, 0.037516170763260026, 0.03622250970245795, 0.03622250970245795, 0.03622250970245795, 0.03622250970245795, 0.03622250970245795, 0.03492884864165589, 0.03492884864165589, 0.03492884864165589, 0.03363518758085381, 0.03492884864165589, 0.03492884864165589, 0.03363518758085381, 0.03363518758085381, 0.03363518758085381, 0.031047865459249677, 0.029754204398447608, 0.031047865459249677, 0.031047865459249677, 0.03492884864165589, 0.03492884864165589, 0.03492884864165589, 0.03622250970245795, 0.03622250970245795, 0.03622250970245795, 0.03622250970245795, 0.03622250970245795, 0.03492884864165589, 0.03622250970245795, 0.037516170763260026, 0.03622250970245795, 0.037516170763260026, 0.03880983182406209, 0.047865459249676584, 0.04657179818887452, 0.047865459249676584, 0.04657179818887452, 0.04398447606727038, 0.042690815006468305, 0.042690815006468305, 0.04398447606727038, 0.04398447606727038, 0.04398447606727038, 0.04398447606727038, 0.04398447606727038, 0.04398447606727038, 0.04398447606727038, 0.04398447606727038, 0.04398447606727038, 0.042690815006468305, 0.04139715394566624, 0.04139715394566624, 0.042690815006468305, 0.04398447606727038, 0.045278137128072445, 0.045278137128072445, 0.045278137128072445, 0.045278137128072445, 0.045278137128072445, 0.04657179818887452, 0.047865459249676584, 0.04915912031047866, 0.050452781371280724, 0.0517464424320828, 0.05304010349288486, 0.054333764553686936, 0.055627425614489, 0.06338939197930142, 0.07503234152652005, 0.0815006468305304, 0.16170763260025872, 0.6675291073738681], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/ATP-synt_F.gap.json

@@ -0,0 +1 @@
+{"family": "ATP-synt_F", "n_seqs": 755, "length": 108, "gap_rates": [0.423841059602649, 0.19735099337748344, 0.08344370860927153, 0.059602649006622516, 0.051655629139072845, 0.04768211920529802, 0.04105960264900662, 0.8463576158940397, 0.03576158940397351, 0.03576158940397351, 0.031788079470198675, 0.02913907284768212, 0.02913907284768212, 0.02781456953642384, 0.026490066225165563, 0.025165562913907286, 0.02384105960264901, 0.02384105960264901, 0.022516556291390728, 0.02384105960264901, 0.022516556291390728, 0.022516556291390728, 0.026490066225165563, 0.5377483443708609, 0.5496688741721855, 0.5695364238410596, 0.5721854304635762, 0.5748344370860927, 0.6066225165562914, 0.8701986754966887, 0.8688741721854305, 0.5827814569536424, 0.5735099337748344, 0.5695364238410596, 0.5682119205298013, 0.5456953642384106, 0.5046357615894039, 0.018543046357615896, 0.022516556291390728, 0.03708609271523179, 0.02384105960264901, 0.022516556291390728, 0.02119205298013245, 0.019867549668874173, 0.019867549668874173, 0.019867549668874173, 0.019867549668874173, 0.019867549668874173, 0.019867549668874173, 0.019867549668874173, 0.019867549668874173, 0.02119205298013245, 0.23443708609271524, 0.8781456953642384, 0.045033112582781455, 0.018543046357615896, 0.017218543046357615, 0.017218543046357615, 0.017218543046357615, 0.01456953642384106, 0.01456953642384106, 0.015894039735099338, 0.015894039735099338, 0.017218543046357615, 0.015894039735099338, 0.013245033112582781, 0.013245033112582781, 0.019867549668874173, 0.02119205298013245, 0.02119205298013245, 0.026490066225165563, 0.026490066225165563, 0.026490066225165563, 0.025165562913907286, 0.02384105960264901, 0.025165562913907286, 0.026490066225165563, 0.02781456953642384, 0.02781456953642384, 0.02913907284768212, 0.4649006622516556, 0.7205298013245033, 0.026490066225165563, 0.02781456953642384, 0.026490066225165563, 0.026490066225165563, 0.02913907284768212, 0.02781456953642384, 0.02913907284768212, 0.033112582781456956, 0.04370860927152318, 0.0423841059602649, 0.046357615894039736, 0.052980132450331126, 0.05827814569536424, 0.1456953642384106, 0.12317880794701987, 0.1562913907284768, 0.1562913907284768, 0.1947019867549669, 0.16688741721854305, 0.1695364238410596, 0.1827814569536424, 0.1986754966887417, 0.21324503311258278, 0.22913907284768212, 0.29668874172185433, 0.44900662251655626], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/ATP_bind_1.gap.json

@@ -0,0 +1 @@
+{"family": "ATP_bind_1", "n_seqs": 1641, "length": 286, "gap_rates": [0.24192565508836075, 0.1785496648385131, 0.1736745886654479, 0.15965874466788543, 0.15600243753808654, 0.15600243753808654, 0.15600243753808654, 0.15478366849482023, 0.15417428397318708, 0.15112736136502133, 0.15112736136502133, 0.1505179768433882, 0.14990859232175502, 0.14747105423522242, 0.1450335161486898, 0.14137720901889092, 0.14137720901889092, 0.14015843997562463, 0.14015843997562463, 0.13893967093235832, 0.13772090188909203, 0.13833028641072517, 0.13954905545399146, 0.37355271176112126, 0.3656307129798903, 0.3595368677635588, 0.3558805606337599, 0.3546617915904936, 0.35283363802559414, 0.3534430225472273, 0.35283363802559414, 0.35161486898232786, 0.35161486898232786, 0.352224253503961, 0.3510054844606947, 0.35283363802559414, 0.352224253503961, 0.3595368677635588, 0.35770871419865935, 0.3570993296770262, 0.35770871419865935, 0.3534430225472273, 0.35039609993906157, 0.34673979280926265, 0.34673979280926265, 0.3449116392443632, 0.125533211456429, 0.12431444241316271, 0.1194393662400975, 0.11517367458866545, 0.10968921389396709, 0.10786106032906764, 0.10603290676416818, 0.10298598415600244, 0.1035953686776356, 0.10420475319926874, 0.10054844606946983, 0.10054844606946983, 0.09932967702620353, 0.7355271176112127, 0.7215112736136502, 0.10603290676416818, 0.09750152346130408, 0.09628275441803778, 0.09262644728823888, 0.09140767824497258, 0.08775137111517367, 0.08775137111517367, 0.09018890920170627, 0.08775137111517367, 0.08714198659354053, 0.08714198659354053, 0.08714198659354053, 0.08531383302864107, 0.08531383302864107, 0.08653260207190737, 0.08348567946374162, 0.08348567946374162, 0.08348567946374162, 0.08409506398537477, 0.08226691042047532, 0.34125533211456427, 0.3461304082876295, 0.33455210237659966, 0.08836075563680683, 0.08531383302864107, 0.08409506398537477, 0.08957952468007313, 0.36867763558805605, 0.9378427787934186, 0.9427178549664839, 0.9451553930530164, 0.9494210847044485, 0.946983546617916, 0.943327239488117, 0.9378427787934186, 0.9378427787934186, 0.35161486898232786, 0.35892748324192564, 0.696526508226691, 0.35039609993906157, 0.3333333333333333, 0.935405240706886, 0.7812309567336989, 0.08287629494210846, 0.07678244972577697, 0.07678244972577697, 0.07678244972577697, 0.07617306520414381, 0.07617306520414381, 0.07556368068251067, 0.07556368068251067, 0.07739183424741011, 0.07861060329067641, 0.07861060329067641, 0.07982937233394272, 0.07982937233394272, 0.08104814137720902, 0.08165752589884218, 0.08165752589884218, 0.08165752589884218, 0.08165752589884218, 0.08165752589884218, 0.07982937233394272, 0.07800121876904327, 0.3449116392443632, 0.3436928702010969, 0.34430225472273, 0.3424741011578306, 0.3436928702010969, 0.34308348567946373, 0.34308348567946373, 0.35770871419865935, 0.8519195612431444, 0.5904936014625228, 0.09323583180987204, 0.08714198659354053, 0.08470444850700792, 0.08531383302864107, 0.08653260207190737, 0.08653260207190737, 0.08592321755027423, 0.08653260207190737, 0.08653260207190737, 0.08592321755027423, 0.08897014015843997, 0.08897014015843997, 0.08957952468007313, 0.08897014015843997, 0.09018890920170627, 0.08653260207190737, 0.08897014015843997, 0.8092626447288239, 0.8153564899451554, 0.7897623400365631, 0.10968921389396709, 0.10603290676416818, 0.10542352224253504, 0.09018890920170627, 0.09262644728823888, 0.09506398537477148, 0.09628275441803778, 0.3229737964655698, 0.3211456429006703, 0.3174893357708714, 0.3162705667276051, 0.31566118220597195, 0.31322364411943937, 0.30834856794637416, 0.27178549664838514, 0.27117611212675197, 0.2626447288238879, 0.08775137111517367, 0.08653260207190737, 0.08592321755027423, 0.08592321755027423, 0.08531383302864107, 0.08531383302864107, 0.08531383302864107, 0.08531383302864107, 0.08531383302864107, 0.08531383302864107, 0.08531383302864107, 0.08592321755027423, 0.08714198659354053, 0.09018890920170627, 0.14381474710542352, 0.1316270566727605, 0.558805606337599, 0.5533211456429007, 0.7873248019500305, 0.931139549055454, 0.6721511273613651, 0.33638025594149906, 0.32480195003046924, 0.3235831809872029, 0.3235831809872029, 0.3217550274223035, 0.3217550274223035, 0.3223644119439366, 0.32053625837903715, 0.3235831809872029, 0.3333333333333333, 0.33089579524680074, 0.34064594759293115, 0.34125533211456427, 0.34064594759293115, 0.3436928702010969, 0.3436928702010969, 0.35283363802559414, 0.3595368677635588, 0.36745886654478976, 0.37294332723948814, 0.34673979280926265, 0.3753808653260207, 0.48202315661182205, 0.5368677635588056, 0.6563071297989032, 0.7696526508226691, 0.8318098720292505, 0.8677635588056063, 0.8836075563680682, 0.894576477757465, 0.9104204753199269, 0.9238269347958562, 0.9396709323583181, 0.9451553930530164, 0.9451553930530164, 0.9421084704448507, 0.9335770871419866, 0.9165143205362584, 0.898842169408897, 0.8872638634978671, 0.8769043266301036, 0.8525289457647776, 0.7830591102985984, 0.7544180377818404, 0.6166971358927483, 0.5198049969530774, 0.3918342474101158, 0.3668494820231566, 0.2851919561243144, 0.1736745886654479, 0.16697135892748324, 0.16087751371115175, 0.1614868982327849, 0.1614868982327849, 0.16026812918951858, 0.1614868982327849, 0.1614868982327849, 0.1614868982327849, 0.16331505179768435, 0.16575258988421693, 0.16819012797074953, 0.16819012797074953, 0.170018281535649, 0.170018281535649, 0.1712370505789153, 0.1724558196221816, 0.5746496039000609, 0.1761121267519805, 0.1761121267519805, 0.1761121267519805, 0.17794028031687995, 0.17794028031687995, 0.1773308957952468, 0.17794028031687995, 0.18037781840341255, 0.18281535648994515, 0.1834247410115783, 0.1846435100548446, 0.1858622790981109, 0.18525289457647776, 0.18525289457647776, 0.1858622790981109, 0.18647166361974407, 0.18708104814137722, 0.18890920170627665, 0.19256550883607557, 0.19622181596587446, 0.20475319926873858, 0.21937842778793418, 0.24923826934795856, 0.34795856185252894, 0.5661182205971969, 0.8580134064594759], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/ATPase_2.gap.json

@@ -0,0 +1 @@
+{"family": "ATPase_2", "n_seqs": 589, "length": 283, "gap_rates": [0.25806451612903225, 0.18166383701188454, 0.16808149405772496, 0.0899830220713073, 0.0831918505942275, 0.07470288624787776, 0.0730050933786078, 0.07130730050933787, 0.06621392190152801, 0.06451612903225806, 0.057724957555178265, 0.05602716468590832, 0.05602716468590832, 0.05432937181663837, 0.05263157894736842, 0.05602716468590832, 0.06112054329371817, 0.1697792869269949, 0.14431239388794567, 0.08828522920203735, 0.0730050933786078, 0.059422750424448216, 0.04074702886247878, 0.04584040747028863, 0.04753820033955857, 0.06112054329371817, 0.022071307300509338, 0.01867572156196944, 0.01867572156196944, 0.015280135823429542, 0.015280135823429542, 0.015280135823429542, 0.015280135823429542, 0.015280135823429542, 0.015280135823429542, 0.015280135823429542, 0.015280135823429542, 0.01867572156196944, 0.023769100169779286, 0.022071307300509338, 0.02037351443123939, 0.02037351443123939, 0.01867572156196944, 0.01867572156196944, 0.9456706281833617, 0.44991511035653653, 0.4567062818336163, 0.5551782682512734, 0.4855687606112054, 0.4567062818336163, 0.9303904923599321, 0.9066213921901528, 0.15110356536502548, 0.0899830220713073, 0.057724957555178265, 0.05602716468590832, 0.04753820033955857, 0.044142614601018676, 0.04074702886247878, 0.04923599320882852, 0.04074702886247878, 0.03904923599320883, 0.044142614601018676, 0.035653650254668934, 0.03904923599320883, 0.03225806451612903, 0.03395585738539898, 0.03225806451612903, 0.035653650254668934, 0.04074702886247878, 0.050933786078098474, 0.6247877758913413, 0.6044142614601019, 0.7028862478777589, 0.7928692699490663, 0.830220713073005, 0.8930390492359932, 0.9252971137521222, 0.9490662139219015, 0.9032258064516129, 0.8624787775891342, 0.8183361629881154, 0.7402376910016978, 0.6842105263157895, 0.5908319185059423, 0.6129032258064516, 0.5280135823429541, 0.48047538200339557, 0.20203735144312393, 0.1969439728353141, 0.21222410865874364, 0.19185059422750425, 0.1460101867572156, 0.14091680814940577, 0.12903225806451613, 0.05432937181663837, 0.7181663837011885, 0.7402376910016978, 0.7538200339558574, 0.7640067911714771, 0.7809847198641766, 0.7945670628183361, 0.8200339558573854, 0.8471986417657046, 0.8981324278438031, 0.9219015280135824, 0.9354838709677419, 0.9473684210526315, 0.9439728353140917, 0.9286926994906621, 0.9032258064516129, 0.8692699490662139, 0.8353140916808149, 0.8030560271646859, 0.7843803056027164, 0.7741935483870968, 0.7572156196943973, 0.7487266553480475, 0.733446519524618, 0.7079796264855688, 0.14431239388794567, 0.16298811544991512, 0.12393887945670629, 0.10865874363327674, 0.0899830220713073, 0.09168081494057725, 0.16298811544991512, 0.16129032258064516, 0.1833616298811545, 0.6366723259762309, 0.631578947368421, 0.6230899830220713, 0.6808149405772496, 0.631578947368421, 0.8353140916808149, 0.9168081494057725, 0.7436332767402377, 0.5619694397283531, 0.4838709677419355, 0.37860780984719866, 0.1765704584040747, 0.12054329371816638, 0.08149405772495756, 0.050933786078098474, 0.04074702886247878, 0.03395585738539898, 0.03225806451612903, 0.035653650254668934, 0.03735144312393888, 0.03395585738539898, 0.03395585738539898, 0.03904923599320883, 0.04074702886247878, 0.05263157894736842, 0.03735144312393888, 0.04074702886247878, 0.06281833616298811, 0.23429541595925296, 0.15619694397283532, 0.09847198641765705, 0.8047538200339559, 0.6926994906621392, 0.07809847198641766, 0.025466893039049237, 0.022071307300509338, 0.022071307300509338, 0.022071307300509338, 0.023769100169779286, 0.023769100169779286, 0.023769100169779286, 0.023769100169779286, 0.025466893039049237, 0.027164685908319185, 0.028862478777589132, 0.7809847198641766, 0.7741935483870968, 0.35144312393887944, 0.3853989813242784, 0.11205432937181664, 0.42784380305602715, 0.3701188455008489, 0.0967741935483871, 0.07979626485568761, 0.07979626485568761, 0.06960950764006792, 0.05432937181663837, 0.050933786078098474, 0.04753820033955857, 0.04753820033955857, 0.04923599320882852, 0.05432937181663837, 0.05602716468590832, 0.06451612903225806, 0.06791171477079797, 0.2699490662139219, 0.26485568760611206, 0.19864176570458403, 0.0899830220713073, 0.07809847198641766, 0.07640067911714771, 0.057724957555178265, 0.06621392190152801, 0.06451612903225806, 0.06451612903225806, 0.07130730050933787, 0.0730050933786078, 0.06621392190152801, 0.07130730050933787, 0.0730050933786078, 0.07130730050933787, 0.0730050933786078, 0.0730050933786078, 0.07130730050933787, 0.0730050933786078, 0.07640067911714771, 0.9422750424448217, 0.49575551782682514, 0.19864176570458403, 0.19524617996604415, 0.18845500848896435, 0.17487266553480477, 0.1697792869269949, 0.17147707979626486, 0.16468590831918506, 0.10186757215619695, 0.10186757215619695, 0.100169779286927, 0.100169779286927, 0.1035653650254669, 0.1035653650254669, 0.10526315789473684, 0.35823429541595925, 0.10696095076400679, 0.10696095076400679, 0.10526315789473684, 0.10526315789473684, 0.10526315789473684, 0.10696095076400679, 0.2427843803056027, 0.24448217317487267, 0.24108658743633277, 0.22071307300509338, 0.1935483870967742, 0.14431239388794567, 0.12903225806451613, 0.12563667232597622, 0.13242784380305603, 0.13242784380305603, 0.13242784380305603, 0.31918505942275044, 0.5534804753820034, 0.5382003395585738, 0.5093378607809848, 0.4906621392190153, 0.7589134125636672, 0.4601018675721562, 0.4770797962648557, 0.3548387096774194, 0.9100169779286927, 0.9354838709677419, 0.830220713073005, 0.16129032258064516, 0.16129032258064516, 0.1460101867572156, 0.14261460101867574, 0.14091680814940577, 0.14261460101867574, 0.14091680814940577, 0.13921901528013583, 0.14261460101867574, 0.1460101867572156, 0.15110356536502548, 0.15449915110356535, 0.16298811544991512, 0.15789473684210525, 0.16468590831918506, 0.1697792869269949, 0.19015280135823429, 0.21561969439728354, 0.2920203735144312, 0.366723259762309, 0.5365025466893039, 0.8030560271646859], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/AbiEi_3_N.gap.json

@@ -0,0 +1 @@
+{"family": "AbiEi_3_N", "n_seqs": 102, "length": 99, "gap_rates": [0.8137254901960784, 0.5294117647058824, 0.35294117647058826, 0.2647058823529412, 0.23529411764705882, 0.19607843137254902, 0.19607843137254902, 0.19607843137254902, 0.18627450980392157, 0.14705882352941177, 0.14705882352941177, 0.14705882352941177, 0.13725490196078433, 0.12745098039215685, 0.12745098039215685, 0.10784313725490197, 0.08823529411764706, 0.08823529411764706, 0.0784313725490196, 0.0784313725490196, 0.0784313725490196, 0.0784313725490196, 0.08823529411764706, 0.06862745098039216, 0.058823529411764705, 0.058823529411764705, 0.058823529411764705, 0.058823529411764705, 0.049019607843137254, 0.049019607843137254, 0.049019607843137254, 0.049019607843137254, 0.049019607843137254, 0.049019607843137254, 0.049019607843137254, 0.049019607843137254, 0.049019607843137254, 0.049019607843137254, 0.049019607843137254, 0.049019607843137254, 0.049019607843137254, 0.049019607843137254, 0.049019607843137254, 0.049019607843137254, 0.049019607843137254, 0.049019607843137254, 0.0392156862745098, 0.0392156862745098, 0.0392156862745098, 0.0196078431372549, 0.0196078431372549, 0.00980392156862745, 0.00980392156862745, 0.00980392156862745, 0.0196078431372549, 0.00980392156862745, 0.7843137254901961, 0.803921568627451, 0.8921568627450981, 0.8823529411764706, 0.7843137254901961, 0.7745098039215687, 0.00980392156862745, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0196078431372549, 0.0196078431372549, 0.0196078431372549, 0.00980392156862745, 0.28431372549019607, 0.029411764705882353, 0.00980392156862745, 0.00980392156862745, 0.00980392156862745, 0.00980392156862745, 0.00980392156862745, 0.00980392156862745, 0.00980392156862745, 0.00980392156862745, 0.00980392156862745, 0.00980392156862745, 0.00980392156862745, 0.0196078431372549, 0.0196078431372549, 0.0196078431372549, 0.029411764705882353, 0.0392156862745098, 0.0392156862745098, 0.049019607843137254, 0.1568627450980392, 0.5490196078431373], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/Abi_C.gap.json

@@ -0,0 +1 @@
+{"family": "Abi_C", "n_seqs": 118, "length": 85, "gap_rates": [0.7627118644067796, 0.3305084745762712, 0.1864406779661017, 0.15254237288135594, 0.13559322033898305, 0.11016949152542373, 0.09322033898305085, 0.07627118644067797, 0.07627118644067797, 0.07627118644067797, 0.07627118644067797, 0.1864406779661017, 0.2542372881355932, 0.3728813559322034, 0.3728813559322034, 0.3813559322033898, 0.3813559322033898, 0.3983050847457627, 0.3813559322033898, 0.3474576271186441, 0.3135593220338983, 0.288135593220339, 0.211864406779661, 0.059322033898305086, 0.05084745762711865, 0.0423728813559322, 0.0423728813559322, 0.0423728813559322, 0.03389830508474576, 0.01694915254237288, 0.00847457627118644, 0.00847457627118644, 0.00847457627118644, 0.00847457627118644, 0.00847457627118644, 0.00847457627118644, 0.00847457627118644, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.8389830508474576, 0.0, 0.0, 0.00847457627118644, 0.0, 0.01694915254237288, 0.1016949152542373, 0.23728813559322035, 0.2457627118644068, 0.3813559322033898, 0.8559322033898306, 0.025423728813559324, 0.025423728813559324, 0.025423728813559324, 0.025423728813559324, 0.025423728813559324, 0.025423728813559324, 0.025423728813559324, 0.025423728813559324, 0.025423728813559324, 0.025423728813559324, 0.025423728813559324, 0.025423728813559324, 0.025423728813559324, 0.03389830508474576, 0.03389830508474576, 0.03389830508474576, 0.03389830508474576, 0.03389830508474576, 0.03389830508474576, 0.03389830508474576, 0.03389830508474576, 0.0423728813559322, 0.0423728813559322, 0.05084745762711865, 0.2033898305084746, 0.711864406779661], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/Acid_phosphat_B.gap.json

@@ -0,0 +1 @@
+{"family": "Acid_phosphat_B", "n_seqs": 540, "length": 266, "gap_rates": [0.9425925925925925, 0.9277777777777778, 0.9055555555555556, 0.8888888888888888, 0.8388888888888889, 0.7851851851851852, 0.7018518518518518, 0.6537037037037037, 0.6240740740740741, 0.6037037037037037, 0.587037037037037, 0.5814814814814815, 0.5777777777777777, 0.5740740740740741, 0.5722222222222222, 0.5703703703703704, 0.5592592592592592, 0.5537037037037037, 0.5518518518518518, 0.5462962962962963, 0.5518518518518518, 0.5518518518518518, 0.6203703703703703, 0.562962962962963, 0.55, 0.5388888888888889, 0.5277777777777778, 0.5092592592592593, 0.65, 0.5833333333333334, 0.5055555555555555, 0.4666666666666667, 0.4537037037037037, 0.43148148148148147, 0.40925925925925927, 0.39814814814814814, 0.3907407407407407, 0.3888888888888889, 0.45740740740740743, 0.5296296296296297, 0.387037037037037, 0.3592592592592593, 0.31666666666666665, 0.30925925925925923, 0.29259259259259257, 0.2814814814814815, 0.2777777777777778, 0.2722222222222222, 0.3, 0.28703703703703703, 0.2740740740740741, 0.26851851851851855, 0.2611111111111111, 0.23703703703703705, 0.23333333333333334, 0.2351851851851852, 0.2351851851851852, 0.23333333333333334, 0.22962962962962963, 0.22407407407407406, 0.2222222222222222, 0.2222222222222222, 0.2222222222222222, 0.22407407407407406, 0.22592592592592592, 0.2796296296296296, 0.25555555555555554, 0.23703703703703705, 0.6907407407407408, 0.7481481481481481, 0.8574074074074074, 0.9351851851851852, 0.9481481481481482, 0.9074074074074074, 0.7851851851851852, 0.7277777777777777, 0.6555555555555556, 0.24814814814814815, 0.22777777777777777, 0.1685185185185185, 0.1537037037037037, 0.14814814814814814, 0.14629629629629629, 0.14444444444444443, 0.14444444444444443, 0.14444444444444443, 0.14444444444444443, 0.14444444444444443, 0.14444444444444443, 0.14814814814814814, 0.14814814814814814, 0.14629629629629629, 0.15, 0.14814814814814814, 0.16111111111111112, 0.15, 0.1425925925925926, 0.26851851851851855, 0.2518518518518518, 0.21851851851851853, 0.18518518518518517, 0.16111111111111112, 0.14629629629629629, 0.14444444444444443, 0.1425925925925926, 0.15, 0.1425925925925926, 0.1425925925925926, 0.17962962962962964, 0.14074074074074075, 0.13333333333333333, 0.13148148148148148, 0.12962962962962962, 0.12962962962962962, 0.13518518518518519, 0.1259259259259259, 0.12407407407407407, 0.1259259259259259, 0.1259259259259259, 0.11851851851851852, 0.11851851851851852, 0.11296296296296296, 0.9074074074074074, 0.09814814814814815, 0.09814814814814815, 0.0962962962962963, 0.0962962962962963, 0.09259259259259259, 0.08518518518518518, 0.08333333333333333, 0.08148148148148149, 0.08333333333333333, 0.08518518518518518, 0.08518518518518518, 0.08888888888888889, 0.08703703703703704, 0.08333333333333333, 0.08518518518518518, 0.08148148148148149, 0.08333333333333333, 0.08148148148148149, 0.08333333333333333, 0.08333333333333333, 0.08148148148148149, 0.08148148148148149, 0.08148148148148149, 0.08148148148148149, 0.08148148148148149, 0.07777777777777778, 0.07777777777777778, 0.07592592592592592, 0.07592592592592592, 0.8333333333333334, 0.10185185185185185, 0.08518518518518518, 0.07592592592592592, 0.07407407407407407, 0.07407407407407407, 0.07592592592592592, 0.07407407407407407, 0.07407407407407407, 0.07407407407407407, 0.07407407407407407, 0.07407407407407407, 0.07407407407407407, 0.07592592592592592, 0.7851851851851852, 0.924074074074074, 0.95, 0.95, 0.95, 0.95, 0.9444444444444444, 0.8833333333333333, 0.7777777777777778, 0.08148148148148149, 0.08703703703703704, 0.9481481481481482, 0.08333333333333333, 0.16111111111111112, 0.08518518518518518, 0.08703703703703704, 0.08703703703703704, 0.09074074074074075, 0.0962962962962963, 0.09814814814814815, 0.11851851851851852, 0.1259259259259259, 0.1259259259259259, 0.17777777777777778, 0.7277777777777777, 0.2796296296296296, 0.24259259259259258, 0.4648148148148148, 0.40370370370370373, 0.36666666666666664, 0.337037037037037, 0.3, 0.2740740740740741, 0.1537037037037037, 0.15185185185185185, 0.12222222222222222, 0.12222222222222222, 0.12222222222222222, 0.12037037037037036, 0.12037037037037036, 0.11481481481481481, 0.11666666666666667, 0.11481481481481481, 0.11666666666666667, 0.37777777777777777, 0.1574074074074074, 0.11481481481481481, 0.11481481481481481, 0.11481481481481481, 0.11851851851851852, 0.12037037037037036, 0.12222222222222222, 0.12777777777777777, 0.12777777777777777, 0.13148148148148148, 0.13333333333333333, 0.13518518518518519, 0.1388888888888889, 0.1388888888888889, 0.14074074074074075, 0.1425925925925926, 0.8166666666666667, 0.8796296296296297, 0.7962962962962963, 0.7129629629629629, 0.7444444444444445, 0.7444444444444445, 0.7314814814814815, 0.2111111111111111, 0.20185185185185187, 0.3055555555555556, 0.16296296296296298, 0.7518518518518519, 0.7518518518518519, 0.7537037037037037, 0.7537037037037037, 0.7555555555555555, 0.8611111111111112, 0.9296296296296296, 0.8814814814814815, 0.7648148148148148, 0.7537037037037037, 0.7537037037037037, 0.7537037037037037, 0.7518518518518519, 0.7462962962962963, 0.1685185185185185, 0.16111111111111112, 0.1648148148148148, 0.16296296296296298, 0.16111111111111112, 0.1648148148148148, 0.1648148148148148, 0.1685185185185185, 0.20555555555555555, 0.20925925925925926, 0.20555555555555555, 0.23148148148148148, 0.3537037037037037, 0.7962962962962963], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/Acyl-CoA_dh_M.gap.json

@@ -0,0 +1 @@
+{"family": "Acyl-CoA_dh_M", "n_seqs": 5000, "length": 127, "gap_rates": [0.2262, 0.075, 0.0414, 0.0276, 0.0266, 0.0232, 0.0226, 0.0206, 0.0198, 0.9424, 0.017, 0.0152, 0.0148, 0.016, 0.0126, 0.011, 0.0096, 0.0074, 0.0056, 0.439, 0.0196, 0.7486, 0.063, 0.011, 0.0136, 0.0106, 0.0212, 0.1324, 0.041, 0.9496, 0.001, 0.0004, 0.0004, 0.0004, 0.9392, 0.9392, 0.9466, 0.9392, 0.9392, 0.0006, 0.0006, 0.0004, 0.009, 0.0042, 0.0028, 0.0012, 0.0168, 0.002, 0.0146, 0.0022, 0.8614, 0.922, 0.9216, 0.8028, 0.0014, 0.0014, 0.0018, 0.002, 0.0024, 0.0026, 0.0028, 0.0026, 0.0024, 0.8444, 0.9268, 0.6714, 0.3008, 0.2448, 0.2042, 0.151, 0.1378, 0.8524, 0.939, 0.4792, 0.236, 0.0118, 0.0068, 0.0066, 0.0066, 0.0094, 0.0058, 0.0058, 0.0058, 0.0062, 0.0062, 0.9428, 0.8722, 0.0234, 0.0562, 0.0418, 0.0096, 0.7906, 0.8118, 0.873, 0.9238, 0.945, 0.934, 0.9072, 0.8218, 0.8004, 0.7864, 0.0112, 0.0092, 0.0094, 0.0106, 0.011, 0.0118, 0.0128, 0.0822, 0.0642, 0.0774, 0.0696, 0.0802, 0.056, 0.0606, 0.093, 0.1006, 0.0804, 0.08, 0.0784, 0.0768, 0.0784, 0.0844, 0.0936, 0.1242, 0.2152, 0.4004], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/Acyl-CoA_dh_N.gap.json

@@ -0,0 +1 @@
+{"family": "Acyl-CoA_dh_N", "n_seqs": 5000, "length": 133, "gap_rates": [0.5938, 0.3894, 0.3288, 0.2868, 0.2298, 0.1926, 0.1708, 0.158, 0.145, 0.1374, 0.1296, 0.1234, 0.1158, 0.1124, 0.1088, 0.1028, 0.0968, 0.099, 0.079, 0.9398, 0.0862, 0.0948, 0.1028, 0.0672, 0.0566, 0.053, 0.0526, 0.0668, 0.936, 0.89, 0.0618, 0.062, 0.059, 0.8254, 0.0462, 0.8706, 0.8832, 0.897, 0.9268, 0.9, 0.8886, 0.876, 0.8658, 0.051, 0.0436, 0.8984, 0.94, 0.8646, 0.045, 0.0312, 0.0202, 0.9302, 0.9472, 0.912, 0.0162, 0.0152, 0.0146, 0.0134, 0.0134, 0.0134, 0.0144, 0.0128, 0.0116, 0.0134, 0.0138, 0.0114, 0.0118, 0.0114, 0.0528, 0.0174, 0.0162, 0.0198, 0.025, 0.018, 0.0186, 0.0176, 0.0298, 0.018, 0.0114, 0.007, 0.0062, 0.0056, 0.005, 0.0052, 0.0048, 0.005, 0.005, 0.0046, 0.0042, 0.0044, 0.0086, 0.0106, 0.0106, 0.0078, 0.0142, 0.0862, 0.0668, 0.0566, 0.8786, 0.0854, 0.0344, 0.057, 0.036, 0.0948, 0.0598, 0.0896, 0.0464, 0.0476, 0.1602, 0.9442, 0.091, 0.0556, 0.0524, 0.0546, 0.0572, 0.0598, 0.062, 0.064, 0.0674, 0.0698, 0.0736, 0.0756, 0.08, 0.0888, 0.0908, 0.096, 0.099, 0.1018, 0.106, 0.1252, 0.147, 0.2074, 0.4608], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/Acyl-CoA_ox_N.gap.json

@@ -0,0 +1 @@
+{"family": "Acyl-CoA_ox_N", "n_seqs": 518, "length": 130, "gap_rates": [0.5888030888030888, 0.3185328185328185, 0.2277992277992278, 0.16988416988416988, 0.15444015444015444, 0.14671814671814673, 0.13513513513513514, 0.13320463320463322, 0.13127413127413126, 0.13127413127413126, 0.1274131274131274, 0.12934362934362933, 0.12934362934362933, 0.2799227799227799, 0.11969111969111969, 0.11003861003861004, 0.09845559845559845, 0.0945945945945946, 0.0945945945945946, 0.0945945945945946, 0.09266409266409266, 0.0888030888030888, 0.08108108108108109, 0.08108108108108109, 0.07915057915057915, 0.07722007722007722, 0.07528957528957529, 0.07335907335907337, 0.07142857142857142, 0.07528957528957529, 0.07142857142857142, 0.06563706563706563, 0.0637065637065637, 0.06177606177606178, 0.6447876447876448, 0.07915057915057915, 0.07335907335907337, 0.06177606177606178, 0.05791505791505792, 0.055984555984555984, 0.052123552123552123, 0.052123552123552123, 0.052123552123552123, 0.05019305019305019, 0.05019305019305019, 0.05019305019305019, 0.05019305019305019, 0.05019305019305019, 0.05019305019305019, 0.05019305019305019, 0.05019305019305019, 0.05019305019305019, 0.05019305019305019, 0.052123552123552123, 0.05019305019305019, 0.052123552123552123, 0.05405405405405406, 0.052123552123552123, 0.05405405405405406, 0.052123552123552123, 0.05405405405405406, 0.05405405405405406, 0.05405405405405406, 0.07915057915057915, 0.11969111969111969, 0.16216216216216217, 0.5057915057915058, 0.7374517374517374, 0.7393822393822393, 0.747104247104247, 0.29922779922779924, 0.22972972972972974, 0.18146718146718147, 0.138996138996139, 0.9054054054054054, 0.9247104247104247, 0.8996138996138996, 0.30115830115830117, 0.23745173745173745, 0.277992277992278, 0.32432432432432434, 0.6235521235521235, 0.5540540540540541, 0.34555984555984554, 0.27413127413127414, 0.05405405405405406, 0.05405405405405406, 0.052123552123552123, 0.05019305019305019, 0.04633204633204633, 0.04054054054054054, 0.03861003861003861, 0.03088803088803089, 0.03088803088803089, 0.03088803088803089, 0.02895752895752896, 0.8416988416988417, 0.832046332046332, 0.02895752895752896, 0.02895752895752896, 0.06177606177606178, 0.02702702702702703, 0.015444015444015444, 0.015444015444015444, 0.015444015444015444, 0.015444015444015444, 0.015444015444015444, 0.015444015444015444, 0.019305019305019305, 0.021235521235521235, 0.017374517374517374, 0.017374517374517374, 0.019305019305019305, 0.019305019305019305, 0.021235521235521235, 0.023166023166023165, 0.023166023166023165, 0.032818532818532815, 0.02702702702702703, 0.03088803088803089, 0.0444015444015444, 0.05405405405405406, 0.09266409266409266, 0.15057915057915058, 0.1640926640926641, 0.1718146718146718, 0.18725868725868725, 0.2084942084942085, 0.23745173745173745, 0.38996138996138996], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/Adap_comp_sub.gap.json

@@ -0,0 +1 @@
+{"family": "Adap_comp_sub", "n_seqs": 1796, "length": 386, "gap_rates": [0.5851893095768375, 0.40033407572383073, 0.36469933184855235, 0.3724944320712695, 0.32238307349665923, 0.30456570155902, 0.2900890868596882, 0.2678173719376392, 0.2505567928730512, 0.21993318485523386, 0.1720489977728285, 0.1252783964365256, 0.11358574610244988, 0.10356347438752785, 0.09298440979955457, 0.09187082405345212, 0.09075723830734966, 0.09020044543429843, 0.08964365256124722, 0.09131403118040089, 0.09131403118040089, 0.09075723830734966, 0.09020044543429843, 0.08964365256124722, 0.08853006681514476, 0.08797327394209355, 0.08518930957683742, 0.08129175946547884, 0.07906458797327394, 0.938195991091314, 0.07739420935412027, 0.07850779510022271, 0.07405345211581292, 0.07238307349665925, 0.07071269487750557, 0.07071269487750557, 0.06848552338530067, 0.06848552338530067, 0.06848552338530067, 0.06792873051224944, 0.06737193763919821, 0.06792873051224944, 0.06737193763919821, 0.06737193763919821, 0.0645879732739421, 0.06403118040089087, 0.06403118040089087, 0.06403118040089087, 0.06347438752783964, 0.06347438752783964, 0.062360801781737196, 0.061247216035634745, 0.05902004454342984, 0.05957683741648107, 0.05902004454342984, 0.05846325167037862, 0.05790645879732739, 0.05846325167037862, 0.05790645879732739, 0.05846325167037862, 0.05846325167037862, 0.05902004454342984, 0.05846325167037862, 0.05957683741648107, 0.05902004454342984, 0.4710467706013363, 0.4749443207126949, 0.4933184855233853, 0.6932071269487751, 0.732739420935412, 0.7644766146993318, 0.8079064587973274, 0.8964365256124721, 0.9187082405345212, 0.9315144766146993, 0.9404231625835189, 0.9259465478841871, 0.9070155902004454, 0.8836302895322939, 0.7951002227171492, 0.7416481069042317, 0.717706013363029, 0.5645879732739421, 0.4782850779510022, 0.4732739420935412, 0.46993318485523383, 0.43318485523385303, 0.4693763919821826, 0.4131403118040089, 0.9437639198218263, 0.4437639198218263, 0.39198218262806234, 0.3596881959910913, 0.33964365256124723, 0.19320712694877507, 0.07238307349665925, 0.0645879732739421, 0.061247216035634745, 0.05957683741648107, 0.05957683741648107, 0.05957683741648107, 0.05957683741648107, 0.05902004454342984, 0.05902004454342984, 0.06403118040089087, 0.060133630289532294, 0.060133630289532294, 0.8407572383073497, 0.8190423162583519, 0.060133630289532294, 0.060133630289532294, 0.06792873051224944, 0.9253897550111359, 0.05957683741648107, 0.05902004454342984, 0.05902004454342984, 0.05790645879732739, 0.05790645879732739, 0.05790645879732739, 0.05902004454342984, 0.060133630289532294, 0.05957683741648107, 0.05957683741648107, 0.8379732739420935, 0.839086859688196, 0.8730512249443207, 0.8402004454342984, 0.8385300668151447, 0.8374164810690423, 0.060133630289532294, 0.9125835189309577, 0.060133630289532294, 0.060690423162583516, 0.060690423162583516, 0.060133630289532294, 0.05790645879732739, 0.05679287305122494, 0.05679287305122494, 0.06792873051224944, 0.06792873051224944, 0.8685968819599109, 0.9242761692650334, 0.9348552338530067, 0.9443207126948775, 0.9415367483296214, 0.9337416481069042, 0.8841870824053452, 0.638641425389755, 0.5835189309576837, 0.07238307349665925, 0.06180400890868597, 0.062360801781737196, 0.06180400890868597, 0.06291759465478843, 0.06291759465478843, 0.060690423162583516, 0.07238307349665925, 0.06625835189309577, 0.06347438752783964, 0.06291759465478843, 0.062360801781737196, 0.06291759465478843, 0.06403118040089087, 0.06514476614699331, 0.06625835189309577, 0.8468819599109132, 0.08853006681514476, 0.0801781737193764, 0.08407572383073497, 0.5083518930957683, 0.07850779510022271, 0.07071269487750557, 0.07071269487750557, 0.06570155902004454, 0.0645879732739421, 0.0645879732739421, 0.062360801781737196, 0.06347438752783964, 0.06180400890868597, 0.06180400890868597, 0.1520044543429844, 0.15311804008908686, 0.15924276169265034, 0.18429844097995546, 0.9415367483296214, 0.9426503340757239, 0.9471046770601337, 0.9448775055679287, 0.9420935412026726, 0.9409799554565702, 0.18207126948775057, 0.25278396436525613, 0.22271714922049, 0.06792873051224944, 0.06347438752783964, 0.062360801781737196, 0.062360801781737196, 0.062360801781737196, 0.06291759465478843, 0.062360801781737196, 0.06291759465478843, 0.06180400890868597, 0.062360801781737196, 0.062360801781737196, 0.08184855233853007, 0.08463251670378619, 0.13251670378619154, 0.8875278396436526, 0.9114699331848553, 0.9187082405345212, 0.9248329621380846, 0.9315144766146993, 0.9342984409799554, 0.9365256124721604, 0.9393095768374164, 0.9404231625835189, 0.9432071269487751, 0.9454342984409799, 0.9476614699331849, 0.9476614699331849, 0.9487750556792873, 0.9498886414253898, 0.9493318485523385, 0.9487750556792873, 0.9476614699331849, 0.9465478841870824, 0.9443207126948775, 0.9415367483296214, 0.9398663697104677, 0.9376391982182628, 0.9354120267260579, 0.9326280623608018, 0.9315144766146993, 0.920935412026726, 0.9153674832962138, 0.9103563474387528, 0.871380846325167, 0.09521158129175947, 0.08351893095768374, 0.07683741648106904, 0.07126948775055679, 0.07906458797327394, 0.08129175946547884, 0.8836302895322939, 0.08296213808463251, 0.08073496659242761, 0.07015590200445435, 0.06959910913140312, 0.06792873051224944, 0.9265033407572383, 0.9432071269487751, 0.9393095768374164, 0.9086859688195991, 0.09521158129175947, 0.09409799554565701, 0.06959910913140312, 0.07126948775055679, 0.07071269487750557, 0.07628062360801782, 0.08296213808463251, 0.08630289532293986, 0.07405345211581292, 0.07126948775055679, 0.07126948775055679, 0.07126948775055679, 0.07126948775055679, 0.07071269487750557, 0.07238307349665925, 0.07293986636971046, 0.07349665924276169, 0.9393095768374164, 0.9432071269487751, 0.9459910913140311, 0.9465478841870824, 0.9471046770601337, 0.9482182628062361, 0.9482182628062361, 0.9476614699331849, 0.9465478841870824, 0.9459910913140311, 0.9448775055679287, 0.9415367483296214, 0.9187082405345212, 0.0779510022271715, 0.10356347438752785, 0.10634743875278396, 0.10746102449888642, 0.10857461024498886, 0.11414253897550111, 0.10300668151447662, 0.2856347438752784, 0.2744988864142539, 0.2561247216035635, 0.11024498886414254, 0.9270601336302895, 0.10857461024498886, 0.10579064587973273, 0.10690423162583519, 0.10412026726057906, 0.10356347438752785, 0.10690423162583519, 0.10634743875278396, 0.10746102449888642, 0.1876391982182628, 0.2188195991091314, 0.1631403118040089, 0.1492204899777283, 0.1291759465478842, 0.12861915367483295, 0.13028953229398663, 0.29955456570155903, 0.52728285077951, 0.4593541202672606, 0.44097995545657015, 0.7065701559020044, 0.8535634743875279, 0.8658129175946548, 0.8880846325167038, 0.8953229398663697, 0.9031180400890868, 0.9086859688195991, 0.9125835189309577, 0.9175946547884187, 0.9393095768374164, 0.9459910913140311, 0.9259465478841871, 0.9159242761692651, 0.910913140311804, 0.9047884187082406, 0.9014476614699332, 0.89086859688196, 0.8791759465478842, 0.861358574610245, 0.8045657015590201, 0.10968819599109131, 0.10467706013363029, 0.10412026726057906, 0.10412026726057906, 0.10467706013363029, 0.10523385300668152, 0.10968819599109131, 0.111358574610245, 0.16815144766146994, 0.11804008908685969, 0.12026726057906459, 0.14309576837416482, 0.21770601336302894, 0.12861915367483295, 0.1291759465478842, 0.12583518930957685, 0.13140311804008908, 0.13418708240534521, 0.13752783964365256, 0.14643652561247217, 0.15478841870824053, 0.1564587973273942, 0.1631403118040089, 0.23775055679287305, 0.40478841870824056, 0.8847438752783965, 0.9036748329621381, 0.8947661469933185, 0.7288418708240535, 0.2071269487750557, 0.19933184855233854, 0.19933184855233854, 0.20044543429844097, 0.2032293986636971, 0.21325167037861914, 0.22383073496659242, 0.22884187082405344, 0.23106904231625836, 0.22661469933184855, 0.2455456570155902, 0.25389755011135856, 0.2594654788418708, 0.2795100222717149, 0.2884187082405345, 0.32293986636971045, 0.8880846325167038, 0.31403118040089084, 0.3184855233853007, 0.33964365256124723, 0.3658129175946548, 0.4131403118040089, 0.8223830734966593], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/AfsA.gap.json

@@ -0,0 +1 @@
+{"family": "AfsA", "n_seqs": 117, "length": 145, "gap_rates": [0.5811965811965812, 0.37606837606837606, 0.24786324786324787, 0.19658119658119658, 0.18803418803418803, 0.18803418803418803, 0.1794871794871795, 0.17094017094017094, 0.1623931623931624, 0.1623931623931624, 0.1623931623931624, 0.1623931623931624, 0.15384615384615385, 0.13675213675213677, 0.1282051282051282, 0.1111111111111111, 0.11965811965811966, 0.1282051282051282, 0.9230769230769231, 0.41025641025641024, 0.26495726495726496, 0.18803418803418803, 0.19658119658119658, 0.1111111111111111, 0.06837606837606838, 0.06837606837606838, 0.05982905982905983, 0.042735042735042736, 0.05128205128205128, 0.042735042735042736, 0.03418803418803419, 0.02564102564102564, 0.008547008547008548, 0.0, 0.0, 0.008547008547008548, 0.09401709401709402, 0.02564102564102564, 0.017094017094017096, 0.017094017094017096, 0.9230769230769231, 0.811965811965812, 0.13675213675213677, 0.02564102564102564, 0.017094017094017096, 0.017094017094017096, 0.008547008547008548, 0.017094017094017096, 0.008547008547008548, 0.008547008547008548, 0.008547008547008548, 0.008547008547008548, 0.008547008547008548, 0.008547008547008548, 0.008547008547008548, 0.017094017094017096, 0.03418803418803419, 0.03418803418803419, 0.03418803418803419, 0.03418803418803419, 0.042735042735042736, 0.02564102564102564, 0.042735042735042736, 0.042735042735042736, 0.042735042735042736, 0.05128205128205128, 0.05128205128205128, 0.05128205128205128, 0.9316239316239316, 0.8803418803418803, 0.23931623931623933, 0.20512820512820512, 0.19658119658119658, 0.19658119658119658, 0.36752136752136755, 0.24786324786324787, 0.23076923076923078, 0.18803418803418803, 0.17094017094017094, 0.1623931623931624, 0.1452991452991453, 0.06837606837606838, 0.06837606837606838, 0.06837606837606838, 0.06837606837606838, 0.06837606837606838, 0.2222222222222222, 0.11965811965811966, 0.09401709401709402, 0.09401709401709402, 0.10256410256410256, 0.15384615384615385, 0.11965811965811966, 0.1111111111111111, 0.09401709401709402, 0.6581196581196581, 0.905982905982906, 0.9401709401709402, 0.6923076923076923, 0.6410256410256411, 0.08547008547008547, 0.08547008547008547, 0.08547008547008547, 0.08547008547008547, 0.10256410256410256, 0.1111111111111111, 0.1111111111111111, 0.1111111111111111, 0.1111111111111111, 0.11965811965811966, 0.11965811965811966, 0.1282051282051282, 0.13675213675213677, 0.15384615384615385, 0.7435897435897436, 0.6581196581196581, 0.42735042735042733, 0.39316239316239315, 0.36752136752136755, 0.3162393162393162, 0.24786324786324787, 0.20512820512820512, 0.20512820512820512, 0.19658119658119658, 0.1794871794871795, 0.1794871794871795, 0.17094017094017094, 0.17094017094017094, 0.1794871794871795, 0.18803418803418803, 0.18803418803418803, 0.18803418803418803, 0.19658119658119658, 0.20512820512820512, 0.20512820512820512, 0.20512820512820512, 0.2222222222222222, 0.23931623931623933, 0.2564102564102564, 0.26495726495726496, 0.3076923076923077, 0.4700854700854701, 0.5641025641025641, 0.7435897435897436, 0.9487179487179487], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/Ala_racemase_C.gap.json

@@ -0,0 +1 @@
+{"family": "Ala_racemase_C", "n_seqs": 2200, "length": 137, "gap_rates": [0.26272727272727275, 0.095, 0.04090909090909091, 0.023636363636363636, 0.017727272727272727, 0.014545454545454545, 0.014090909090909091, 0.014090909090909091, 0.012727272727272728, 0.012272727272727272, 0.011818181818181818, 0.011818181818181818, 0.011818181818181818, 0.011363636363636364, 0.011363636363636364, 0.011818181818181818, 0.01090909090909091, 0.01090909090909091, 0.011363636363636364, 0.011363636363636364, 0.01090909090909091, 0.011363636363636364, 0.01090909090909091, 0.010454545454545454, 0.012727272727272728, 0.015909090909090907, 0.00909090909090909, 0.008636363636363636, 0.007727272727272728, 0.008181818181818182, 0.007727272727272728, 0.007272727272727273, 0.005909090909090909, 0.005454545454545455, 0.003181818181818182, 0.0027272727272727275, 0.0027272727272727275, 0.0027272727272727275, 0.0027272727272727275, 0.0027272727272727275, 0.0027272727272727275, 0.0027272727272727275, 0.0027272727272727275, 0.003181818181818182, 0.003181818181818182, 0.004090909090909091, 0.0036363636363636364, 0.005, 0.004090909090909091, 0.007272727272727273, 0.24, 0.945, 0.95, 0.9481818181818182, 0.8490909090909091, 0.1618181818181818, 0.008181818181818182, 0.9222727272727272, 0.8527272727272728, 0.009545454545454546, 0.009545454545454546, 0.00909090909090909, 0.004090909090909091, 0.006363636363636364, 0.005909090909090909, 0.01, 0.008181818181818182, 0.004545454545454545, 0.0036363636363636364, 0.004545454545454545, 0.004545454545454545, 0.005454545454545455, 0.013636363636363636, 0.005909090909090909, 0.006363636363636364, 0.005454545454545455, 0.005, 0.004545454545454545, 0.004545454545454545, 0.005, 0.005, 0.005454545454545455, 0.005909090909090909, 0.006818181818181818, 0.06227272727272727, 0.24272727272727274, 0.15363636363636363, 0.05818181818181818, 0.9063636363636364, 0.860909090909091, 0.03636363636363636, 0.022727272727272728, 0.02, 0.012272727272727272, 0.008636363636363636, 0.011363636363636364, 0.011818181818181818, 0.012727272727272728, 0.01681818181818182, 0.028636363636363637, 0.03772727272727273, 0.8927272727272727, 0.038636363636363635, 0.3759090909090909, 0.44136363636363635, 0.5295454545454545, 0.4213636363636364, 0.06681818181818182, 0.05272727272727273, 0.04318181818181818, 0.03090909090909091, 0.03090909090909091, 0.03272727272727273, 0.03227272727272727, 0.03227272727272727, 0.03363636363636364, 0.03318181818181818, 0.03363636363636364, 0.03363636363636364, 0.034545454545454546, 0.035, 0.035454545454545454, 0.035454545454545454, 0.03590909090909091, 0.03590909090909091, 0.03636363636363636, 0.038181818181818185, 0.038636363636363635, 0.03909090909090909, 0.05090909090909091, 0.04681818181818182, 0.05, 0.056818181818181816, 0.06545454545454546, 0.10954545454545454, 0.15818181818181817, 0.4409090909090909], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/Aldolase_II.gap.json

@@ -0,0 +1 @@
+{"family": "Aldolase_II", "n_seqs": 3706, "length": 253, "gap_rates": [0.8548300053966541, 0.3424177010253643, 0.1929303831624393, 0.14624932541824068, 0.12385321100917432, 0.11036157582298975, 0.10010793308148948, 0.09390178089584458, 0.08796546141392336, 0.08364813815434431, 0.08041014570966001, 0.9214786832164058, 0.07609282245008095, 0.07204533189422559, 0.07015650296815974, 0.06853750674581759, 0.06610901241230437, 0.06449001618996222, 0.061252023745277925, 0.05450620615218565, 0.07015650296815974, 0.05126821370750135, 0.05126821370750135, 0.050728548300053966, 0.05018888289260658, 0.0496492174851592, 0.048569886670264434, 0.09686994063680518, 0.9282245008094981, 0.9390178089584458, 0.9303831624392876, 0.9257960064759849, 0.10550458715596331, 0.8613059902860226, 0.9182406907717215, 0.9387479762547221, 0.8936859147328656, 0.6233135456017269, 0.43928764166216944, 0.11548839719373988, 0.05153804641122504, 0.04722072315164598, 0.045871559633027525, 0.04641122504047491, 0.8577981651376146, 0.04506206152185645, 0.04479222881813276, 0.044522396114409064, 0.045871559633027525, 0.0466810577441986, 0.04883971937398813, 0.044252563410685376, 0.044522396114409064, 0.04317323259579061, 0.04317323259579061, 0.041824069077172156, 0.04128440366972477, 0.9481921208850512, 0.9301133297355639, 0.03939557474365893, 0.03858607663248786, 0.03831624392876417, 0.03750674581759309, 0.036427415002698325, 0.03615758229897464, 0.03588774959525094, 0.039665407447382624, 0.07339449541284404, 0.05153804641122504, 0.7374527792768484, 0.061252023745277925, 0.9495412844036697, 0.04722072315164598, 0.04695089044792229, 0.041824069077172156, 0.9336211548839719, 0.9357798165137615, 0.9384781435509983, 0.9417161359956827, 0.9444144630329195, 0.9403669724770642, 0.9384781435509983, 0.9336211548839719, 0.9301133297355639, 0.22315164597949272, 0.23232595790609822, 0.8351322180248246, 0.8750674581759309, 0.8934160820291419, 0.9228278467350243, 0.9241770102536427, 0.9147328656233136, 0.8839719373988127, 0.8580679978413384, 0.8119266055045872, 0.6627091203453859, 0.4511602806260119, 0.39827307069616835, 0.1273610361575823, 0.06475984889368591, 0.08364813815434431, 0.039665407447382624, 0.03750674581759309, 0.7822450080949811, 0.039665407447382624, 0.03615758229897464, 0.03588774959525094, 0.033998920669185105, 0.03184025903939557, 0.031570426335671885, 0.03130059363194819, 0.029951430113329736, 0.029411764705882353, 0.12007555315704263, 0.11467889908256881, 0.12601187263896385, 0.9468429573664328, 0.1802482460874258, 0.1616297895304911, 0.0310307609282245, 0.028602266594711278, 0.027792768483540203, 0.028062601187263895, 0.027522935779816515, 0.027522935779816515, 0.027792768483540203, 0.027253103076092824, 0.027253103076092824, 0.027792768483540203, 0.03372908796546142, 0.03372908796546142, 0.03453858607663249, 0.03507825148407987, 0.035617916891527254, 0.035617916891527254, 0.03588774959525094, 0.2574203993524015, 0.06961683756071235, 0.5180787911494873, 0.8327037236913114, 0.8661629789530491, 0.8783054506206153, 0.9212088505126821, 0.9347004856988667, 0.9106853750674582, 0.8766864543982731, 0.8378305450620616, 0.8270372369131138, 0.6295196977873718, 0.16918510523475444, 0.09660010793308149, 0.15974096060442525, 0.1179168915272531, 0.12871019967620076, 0.12385321100917432, 0.9166216945493794, 0.11332973556395035, 0.07123583378305451, 0.06610901241230437, 0.05666486778197517, 0.05936319481921209, 0.06098219104155424, 0.06556934700485699, 0.4786832164058284, 0.1524554776038856, 0.4870480302212628, 0.36211548839719376, 0.8944954128440367, 0.9263356718834322, 0.9392876416621695, 0.9363194819212088, 0.9069077172153265, 0.8631948192120885, 0.046141392336751214, 0.05126821370750135, 0.03426875337290879, 0.031570426335671885, 0.032379924446842956, 0.08850512682137075, 0.05180787911494873, 0.04641122504047491, 0.03993524015110631, 0.042093901780895844, 0.9341608202914193, 0.8974635725849973, 0.291958985429034, 0.11602806260118727, 0.18753372908796545, 0.06556934700485699, 0.09120345385860766, 0.06475984889368591, 0.749055585536967, 0.8124662709120345, 0.8785752833243389, 0.9087965461413924, 0.9025903939557475, 0.8764166216945494, 0.770912034538586, 0.7245008094981111, 0.12061521856449002, 0.03291958985429034, 0.03264975715056665, 0.031570426335671885, 0.03049109552077712, 0.03076092822450081, 0.03507825148407987, 0.032379924446842956, 0.04128440366972477, 0.7258499730167296, 0.45223961144090663, 0.8086886130599028, 0.8607663248785753, 0.9303831624392876, 0.8990825688073395, 0.8332433890987587, 0.667835941716136, 0.0372369131138694, 0.03588774959525094, 0.030221262817053427, 0.02914193200215866, 0.02914193200215866, 0.02914193200215866, 0.029411764705882353, 0.02887209929843497, 0.02887209929843497, 0.02914193200215866, 0.02914193200215866, 0.029411764705882353, 0.030221262817053427, 0.03076092822450081, 0.03130059363194819, 0.03130059363194819, 0.032379924446842956, 0.033189422558014034, 0.033189422558014034, 0.033189422558014034, 0.03372908796546142, 0.036427415002698325, 0.03993524015110631, 0.04128440366972477, 0.0434430652995143, 0.04695089044792229, 0.05018888289260658, 0.053966540744738264, 0.05828386400431732, 0.06260118726389638, 0.06745817593092283, 0.07231516459794927, 0.07852131678359417, 0.0992984349703184, 0.14813815434430652, 0.29411764705882354, 0.6910415542363735], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/Aldose_epim.gap.json

@@ -0,0 +1 @@
+{"family": "Aldose_epim", "n_seqs": 3417, "length": 373, "gap_rates": [0.5888206028680129, 0.39010828211881765, 0.33596722270997953, 0.2903131401814457, 0.27187591454492244, 0.25929177641205736, 0.27480245829675154, 0.5378987415861867, 0.2054433713784021, 0.1890547263681592, 0.17354404448346503, 0.1635937957272461, 0.13930348258706468, 0.12613403570383377, 0.11706175007316359, 0.11296458882060287, 0.11120866256950541, 0.10740415569212759, 0.10623353819139596, 0.10506292069066432, 0.1044776119402985, 0.10389230318993269, 0.10301434006438397, 0.10184372256365233, 0.1006731050629207, 0.10008779631255488, 0.09920983318700614, 0.09920983318700614, 0.5288264559555166, 0.43751829089844896, 0.6347673397717296, 0.5730172666081358, 0.31431079894644426, 0.09891717881182324, 0.09277143693298215, 0.09247878255779923, 0.09218612818261633, 0.09160081943225051, 0.0913081650570676, 0.09013754755633596, 0.08896693005560433, 0.09482001755926252, 0.4524436640327773, 0.4647351477904595, 0.3362598770851624, 0.31723734269827336, 0.3128475270705297, 0.30845771144278605, 0.3169446883230904, 0.38659642961662277, 0.797190517998244, 0.922739244951712, 0.46414983904009366, 0.41147205150717003, 0.3579163008486977, 0.10916008194322505, 0.0784313725490196, 0.07462686567164178, 0.07345624817091015, 0.07257828504536143, 0.07374890254609306, 0.07462686567164178, 0.07345624817091015, 0.07345624817091015, 0.07345624817091015, 0.32162715832601696, 0.3488440152180275, 0.36669593210418494, 0.15510681884694177, 0.398595258999122, 0.39596136962247586, 0.3915715539947322, 0.36318407960199006, 0.3386011120866257, 0.10974539069359086, 0.10301434006438397, 0.08047995317529998, 0.08428446005267778, 0.08282118817676325, 0.08574773192859234, 0.09013754755633596, 0.0913081650570676, 0.0913081650570676, 0.09043020193151888, 0.5706760316066726, 0.8486976880304361, 0.8814749780509219, 0.9183494293239683, 0.9353233830845771, 0.9148375768217735, 0.8662569505414106, 0.6549604916593503, 0.09423470880889669, 0.08779631255487269, 0.0813579163008487, 0.07374890254609306, 0.06760316066725197, 0.06467661691542288, 0.06292069066432543, 0.06057945566286216, 0.061164764413227976, 0.061457418788410885, 0.061164764413227976, 0.5645302897278315, 0.5747731928592332, 0.5539947322212467, 0.061457418788410885, 0.061750073163593794, 0.061457418788410885, 0.061750073163593794, 0.0620427275387767, 0.061457418788410885, 0.061750073163593794, 0.06292069066432543, 0.06467661691542288, 0.2642669007901668, 0.6584723441615452, 0.8852794849282997, 0.9192273924495171, 0.9443956687152473, 0.9031314018144572, 0.807140766754463, 0.568920105355575, 0.4237635352648522, 0.11823236757389523, 0.07287093942054433, 0.06760316066725197, 0.0652619256657887, 0.06438396254023998, 0.06350599941469125, 0.06292069066432543, 0.06379865378987416, 0.06379865378987416, 0.6414983904009365, 0.09482001755926252, 0.07257828504536143, 0.11618378694761487, 0.09803921568627451, 0.8928884986830553, 0.12115891132572432, 0.0810652619256658, 0.8165057067603161, 0.9476148668422593, 0.8726953467954346, 0.7582674860989171, 0.07667544629792215, 0.06701785191688615, 0.06321334503950835, 0.0620427275387767, 0.05823822066139889, 0.05794556628621598, 0.056482294410301434, 0.0553116769095698, 0.0553116769095698, 0.0553116769095698, 0.056189640035118525, 0.056482294410301434, 0.056189640035118525, 0.056482294410301434, 0.05794556628621598, 0.06262803628914253, 0.06321334503950835, 0.49078138718173836, 0.9224465905765291, 0.05999414691249634, 0.05560433128475271, 0.05501902253438689, 0.05560433128475271, 0.05472636815920398, 0.05443371378402107, 0.05414105940883816, 0.05414105940883816, 0.053555750658472345, 0.05297044190810653, 0.4302019315188762, 0.9016681299385426, 0.9467369037167106, 0.5323383084577115, 0.06760316066725197, 0.06057945566286216, 0.05823822066139889, 0.05794556628621598, 0.05677494878548434, 0.05238513315774071, 0.0520924787825578, 0.0520924787825578, 0.0520924787825578, 0.05297044190810653, 0.053263096283289436, 0.053555750658472345, 0.05414105940883816, 0.05443371378402107, 0.05765291191103307, 0.056189640035118525, 0.3880597014925373, 0.3778167983611355, 0.5496049165935031, 0.8770851624231782, 0.916300848697688, 0.5996488147497805, 0.44483465027802166, 0.3579163008486977, 0.3418203102136377, 0.0977465613110916, 0.0752121744220076, 0.07433421129645888, 0.07257828504536143, 0.07404155692127597, 0.07609013754755634, 0.0752121744220076, 0.07696810067310507, 0.0784313725490196, 0.9215686274509803, 0.1141352063213345, 0.08721100380450687, 0.08516242317822652, 0.08399180567749488, 0.08516242317822652, 0.08633304067895815, 0.08867427568042142, 0.09189347380743342, 0.9446883230904302, 0.3804506877377817, 0.36932982148083116, 0.35352648522095403, 0.33801580333625986, 0.3617208077260755, 0.34913666959321044, 0.3933274802458297, 0.356745683347966, 0.2955809189347381, 0.14749780509218613, 0.1360842844600527, 0.12584138132865086, 0.1334503950834065, 0.1431079894644425, 0.13023119695639448, 0.13110916008194323, 0.9265437518290899, 0.2712906057945566, 0.22505121451565702, 0.14486391571553994, 0.12876792508047996, 0.12086625695054141, 0.11823236757389523, 0.11559847819724905, 0.11559847819724905, 0.11706175007316359, 0.11969563944980978, 0.1240854550775534, 0.22563652326602282, 0.45829675153643545, 0.5560433128475271, 0.6016973953760608, 0.6763242610477027, 0.7105648229441031, 0.7609013754755634, 0.9083991805677495, 0.7369037167105649, 0.694468832309043, 0.6496927129060579, 0.5779923909862452, 0.5346795434591747, 0.1793971319871232, 0.14047410008779632, 0.12964588820602868, 0.12496341820310214, 0.1240854550775534, 0.12203687445127305, 0.12262218320163887, 0.1237928007023705, 0.1264266900790167, 0.13432835820895522, 0.4141059408838162, 0.5519461515949663, 0.7609013754755634, 0.8943517705589699, 0.9218612818261633, 0.9490781387181738, 0.9347380743342113, 0.9072285630670178, 0.8604038630377524, 0.6242317822651449, 0.4863915715539947, 0.2253438688908399, 0.1691542288557214, 0.13257243195785778, 0.12554872695346794, 0.1331577407082236, 0.12759730757974833, 0.1273046532045654, 0.12847527070529705, 0.12876792508047996, 0.1273046532045654, 0.12584138132865086, 0.13462101258413814, 0.13520632133450394, 0.12788996195493121, 0.1240854550775534, 0.12320749195200469, 0.12320749195200469, 0.1237928007023705, 0.1237928007023705, 0.1237928007023705, 0.12525607257828505, 0.1264266900790167, 0.3090430201931519, 0.12876792508047996, 0.12467076382791922, 0.1237928007023705, 0.12320749195200469, 0.1240854550775534, 0.12525607257828505, 0.1273046532045654, 0.1530582382206614, 0.1565700907228563, 0.15861867134913668, 0.17676324261047702, 0.527070529704419, 0.5776997366110623, 0.5961369622475856, 0.6186713491366695, 0.9186420836991513, 0.9449809774656132, 0.9364940005853087, 0.7857769973661106, 0.6040386303775241, 0.5905765291191103, 0.5662862159789289, 0.35996488147497807, 0.30201931518876207, 0.23822066139888792, 0.20515071700321919, 0.19900497512437812, 0.19285923324553703, 0.1858355282411472, 0.17032484635645304, 0.16505706760316066, 0.1788118232367574, 0.1829089844893181, 0.17149546385718467, 0.17003219198127012, 0.1691542288557214, 0.17061750073163595, 0.17208077260755048, 0.1823236757389523, 0.17968978636230612, 0.18115305823822067, 0.1826163301141352, 0.18407960199004975, 0.19461515949663447, 0.20105355575065847, 0.21041849575651156, 0.23734269827333918, 0.24026924202516828, 0.9013754755633596, 0.40327772900204856, 0.26046239391278897, 0.25870646766169153, 0.26163301141352063, 0.26280362891425224, 0.2630962832894352, 0.2677787532923617, 0.2736318407960199, 0.2800702370500439, 0.286215978928885, 0.29616622768510387, 0.3125548726953468, 0.3456248170910155, 0.3874743927421715, 0.42873865964296165, 0.5071700321919813, 0.7889961954931226], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/Allantoicase.gap.json

@@ -0,0 +1 @@
+{"family": "Allantoicase", "n_seqs": 671, "length": 199, "gap_rates": [0.13561847988077497, 0.11177347242921014, 0.09239940387481371, 0.09090909090909091, 0.08941877794336811, 0.08643815201192251, 0.08494783904619971, 0.08345752608047691, 0.08345752608047691, 0.08196721311475409, 0.07898658718330849, 0.07898658718330849, 0.07898658718330849, 0.07898658718330849, 0.08196721311475409, 0.07898658718330849, 0.07749627421758569, 0.07749627421758569, 0.07749627421758569, 0.10283159463487332, 0.09985096870342772, 0.08643815201192251, 0.08494783904619971, 0.08792846497764531, 0.09687034277198212, 0.5529061102831595, 0.555886736214605, 0.5573770491803278, 0.5663189269746647, 0.5752608047690015, 0.5603576751117735, 0.5573770491803278, 0.555886736214605, 0.5529061102831595, 0.5201192250372578, 0.07302533532041729, 0.06408345752608048, 0.05812220566318927, 0.05216095380029806, 0.05067064083457526, 0.04918032786885246, 0.04918032786885246, 0.04918032786885246, 0.046199701937406856, 0.046199701937406856, 0.04769001490312966, 0.04918032786885246, 0.834575260804769, 0.8524590163934426, 0.8718330849478391, 0.9090909090909091, 0.8777943368107303, 0.8643815201192251, 0.8479880774962743, 0.5320417287630402, 0.05365126676602087, 0.16691505216095381, 0.9061102831594635, 0.9120715350223547, 0.9195230998509687, 0.9299552906110283, 0.9150521609538003, 0.9120715350223547, 0.9031296572280179, 0.17436661698956782, 0.05216095380029806, 0.05216095380029806, 0.05216095380029806, 0.05216095380029806, 0.05216095380029806, 0.05067064083457526, 0.05067064083457526, 0.05067064083457526, 0.05067064083457526, 0.05067064083457526, 0.8658718330849479, 0.05067064083457526, 0.04918032786885246, 0.05067064083457526, 0.05067064083457526, 0.05067064083457526, 0.05216095380029806, 0.05216095380029806, 0.05365126676602087, 0.05365126676602087, 0.05216095380029806, 0.05216095380029806, 0.05216095380029806, 0.05216095380029806, 0.05365126676602087, 0.05067064083457526, 0.05067064083457526, 0.04769001490312966, 0.04769001490312966, 0.04769001490312966, 0.04769001490312966, 0.04769001490312966, 0.046199701937406856, 0.046199701937406856, 0.046199701937406856, 0.046199701937406856, 0.04918032786885246, 0.04918032786885246, 0.04918032786885246, 0.04769001490312966, 0.8405365126676602, 0.8837555886736215, 0.8971684053651267, 0.910581222056632, 0.9165424739195231, 0.9225037257824144, 0.9225037257824144, 0.9254843517138599, 0.9388971684053651, 0.9329359165424739, 0.9225037257824144, 0.9225037257824144, 0.9165424739195231, 0.9165424739195231, 0.9001490312965723, 0.8941877794336811, 0.8614008941877794, 0.8286140089418778, 0.2578241430700447, 0.6140089418777943, 0.46348733233979134, 0.4172876304023845, 0.44113263785394935, 0.38450074515648286, 0.3710879284649776, 0.30849478390462, 0.2667660208643815, 0.18628912071535023, 0.16542473919523099, 0.10730253353204174, 0.06408345752608048, 0.05067064083457526, 0.040238450074515646, 0.037257824143070044, 0.037257824143070044, 0.037257824143070044, 0.037257824143070044, 0.037257824143070044, 0.041728763040238454, 0.037257824143070044, 0.038748137108792845, 0.037257824143070044, 0.038748137108792845, 0.038748137108792845, 0.038748137108792845, 0.037257824143070044, 0.038748137108792845, 0.9150521609538003, 0.9225037257824144, 0.9150521609538003, 0.9120715350223547, 0.040238450074515646, 0.040238450074515646, 0.041728763040238454, 0.043219076005961254, 0.046199701937406856, 0.9165424739195231, 0.9314456035767511, 0.9150521609538003, 0.046199701937406856, 0.07600596125186289, 0.09090909090909091, 0.8390461997019374, 0.9284649776453056, 0.7406855439642325, 0.06557377049180328, 0.8718330849478391, 0.6274217585692996, 0.10581222056631892, 0.05067064083457526, 0.9195230998509687, 0.8256333830104322, 0.04918032786885246, 0.04769001490312966, 0.04769001490312966, 0.046199701937406856, 0.046199701937406856, 0.04769001490312966, 0.04769001490312966, 0.04769001490312966, 0.04769001490312966, 0.04769001490312966, 0.04918032786885246, 0.05067064083457526, 0.05663189269746647, 0.05812220566318927, 0.05961251862891207, 0.06110283159463487, 0.06259314456035768, 0.06259314456035768, 0.06557377049180328, 0.06706408345752608, 0.07004470938897168, 0.09687034277198212], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/Alpha-amylase_C.gap.json

@@ -0,0 +1 @@
+{"family": "Alpha-amylase_C", "n_seqs": 2073, "length": 104, "gap_rates": [0.2450554751567776, 0.21032320308731306, 0.20791123974915582, 0.2841292812349252, 0.2450554751567776, 0.18523878437047755, 0.12108055957549445, 0.04003859141341052, 0.020260492040520984, 0.017848528702363725, 0.015436565364206465, 0.013506994693680656, 0.013024602026049204, 0.0120598166907863, 0.0120598166907863, 0.011577424023154847, 0.011577424023154847, 0.011577424023154847, 0.6575012059816691, 0.9179932465026531, 0.46068499758803666, 0.38205499276411, 0.3810902074288471, 0.43174143753014954, 0.24939700916546068, 0.00964785335262904, 0.009165460684997588, 0.008683068017366137, 0.008200675349734683, 0.008200675349734683, 0.008200675349734683, 0.013506994693680656, 0.010612638687891944, 0.008200675349734683, 0.5918958031837916, 0.020742884708152436, 0.012542209358417752, 0.023154848046309694, 0.013989387361312108, 0.00723589001447178, 0.00723589001447178, 0.007718282682103232, 0.006753497346840328, 0.017366136034732273, 0.014954172696575013, 0.00964785335262904, 0.19874577906415822, 0.009165460684997588, 0.007718282682103232, 0.008200675349734683, 0.006271104679208876, 0.007718282682103232, 0.009165460684997588, 0.006753497346840328, 0.006271104679208876, 0.03328509406657019, 0.03280270139893873, 0.03328509406657019, 0.03424987940183309, 0.04438012542209358, 0.0694645441389291, 0.15340086830680175, 0.14327062228654125, 0.0964785335262904, 0.13121080559575493, 0.17703810902074288, 0.6637723106608779, 0.13121080559575493, 0.0945489628557646, 0.07670043415340087, 0.06560540279787747, 0.0612638687891944, 0.05595754944524843, 0.0472744814278823, 0.0472744814278823, 0.04872165943077665, 0.05161601543656536, 0.056439942112879886, 0.05065123010130246, 0.3589001447178003, 0.9392185238784371, 0.8972503617945007, 0.32416787264833574, 0.10902074288470816, 0.08345393150024119, 0.22334780511336227, 0.20067534973468404, 0.1808972503617945, 0.05788712011577424, 0.05885190545103714, 0.05740472744814279, 0.056922334780511334, 0.05981669078630005, 0.06174626145682586, 0.06512301013024602, 0.06608779546550893, 0.06994693680656054, 0.07091172214182344, 0.07187650747708635, 0.0742884708152436, 0.07670043415340087, 0.0844187168355041, 0.13410516160154365, 0.3989387361312108], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/Alpha_L_fucos.gap.json

@@ -0,0 +1 @@
+{"family": "Alpha_L_fucos", "n_seqs": 1439, "length": 491, "gap_rates": [0.9444058373870744, 0.8908964558721334, 0.8505906879777624, 0.8047255038220987, 0.7678943710910354, 0.7359277275886031, 0.6956219596942321, 0.6580958999305073, 0.6198749131341209, 0.5997220291869354, 0.5858234885337039, 0.5753995830437804, 0.5524669909659485, 0.5392633773453788, 0.5260597637248089, 0.5135510771369006, 0.4996525364836692, 0.4996525364836692, 0.48227936066712995, 0.9478804725503822, 0.43919388464211256, 0.46351633078526755, 0.42807505211952745, 0.3842946490618485, 0.3231410701876303, 0.3182765809589993, 0.34746351633078526, 0.3071577484364142, 0.3036831132731063, 0.30298818624044477, 0.30090340514246006, 0.30090340514246006, 0.3015983321751216, 0.30090340514246006, 0.30090340514246006, 0.30090340514246006, 0.30020847810979845, 0.2953439888811675, 0.29325920778318276, 0.2925642807505212, 0.2897845726198749, 0.2904794996525365, 0.2876997915218902, 0.28353022932592076, 0.28144544822793605, 0.4885337039610841, 0.2828353022932592, 0.7533009034051424, 0.8012508686587908, 0.8193189715079917, 0.8519805420430855, 0.8971507991660875, 0.9464906184850591, 0.9249478804725504, 0.8749131341209173, 0.8339124391938847, 0.8033356497567755, 0.7908269631688672, 0.5719249478804725, 0.27449617790132036, 0.2689367616400278, 0.26476719944405835, 0.2640722724113968, 0.26129256428075054, 0.2828353022932592, 0.28561501042390547, 0.2918693537178596, 0.29881862404447534, 0.3134120917303683, 0.3877692842251564, 0.3766504517025712, 0.8241834607366226, 0.9284225156358582, 0.896455872133426, 0.6587908269631688, 0.6115357887421821, 0.5747046560111189, 0.5545517720639332, 0.532314107018763, 0.5205003474635164, 0.5052119527449618, 0.4996525364836692, 0.4815844336344684, 0.4808895066018068, 0.47810979847116053, 0.8415566365531619, 0.7602501737317582, 0.49409312022237667, 0.47116052814454484, 0.4621264767199444, 0.26685198054204307, 0.26337734537873525, 0.2453092425295344, 0.23210562890896455, 0.9499652536483669, 0.2098679638637943, 0.17581653926337734, 0.11883252258512857, 0.0965948575399583, 0.0945100764419736, 0.09103544127866574, 0.08825573314801946, 0.08617095205003475, 0.08200138985406533, 0.08061153578874218, 0.07991660875608061, 0.0778318276580959, 0.07713690062543432, 0.07644197359277276, 0.0778318276580959, 0.07713690062543432, 0.07713690062543432, 0.07852675469075747, 0.07852675469075747, 0.0778318276580959, 0.07644197359277276, 0.0778318276580959, 0.07644197359277276, 0.07366226546212648, 0.07505211952744961, 0.07505211952744961, 0.07366226546212648, 0.07366226546212648, 0.0729673384294649, 0.07157748436414177, 0.0729673384294649, 0.07227241139680333, 0.07227241139680333, 0.0729673384294649, 0.07227241139680333, 0.07088255733148019, 0.07018763029881862, 0.07157748436414177, 0.07088255733148019, 0.07018763029881862, 0.07088255733148019, 0.07088255733148019, 0.07366226546212648, 0.07157748436414177, 0.07227241139680333, 0.07018763029881862, 0.7970813064628214, 0.06949270326615706, 0.06949270326615706, 0.06879777623349548, 0.06740792216817235, 0.07227241139680333, 0.7706740792216817, 0.9409312022237665, 0.7755385684503128, 0.7602501737317582, 0.17303683113273105, 0.07991660875608061, 0.0847810979847116, 0.7574704656011119, 0.07574704656011119, 0.06879777623349548, 0.06949270326615706, 0.06949270326615706, 0.06810284920083391, 0.06671299513551077, 0.06810284920083391, 0.06810284920083391, 0.06879777623349548, 0.06949270326615706, 0.06879777623349548, 0.06879777623349548, 0.06810284920083391, 0.06810284920083391, 0.9027102154273802, 0.06810284920083391, 0.06810284920083391, 0.06810284920083391, 0.06810284920083391, 0.06810284920083391, 0.06740792216817235, 0.06740792216817235, 0.06810284920083391, 0.06810284920083391, 0.06810284920083391, 0.06810284920083391, 0.06949270326615706, 0.8380820013898541, 0.842946490618485, 0.8498957609451008, 0.8547602501737318, 0.8596247394023627, 0.862404447533009, 0.8686587908269632, 0.886726893676164, 0.9124391938846421, 0.9179986101459346, 0.9235580264072273, 0.9298123697011814, 0.9305072967338429, 0.9437109103544128, 0.9464906184850591, 0.9409312022237665, 0.9298123697011814, 0.9270326615705351, 0.9200833912439194, 0.9173036831132731, 0.8950660180681028, 0.8735232800555942, 0.8658790826963169, 0.862404447533009, 0.8568450312717165, 0.8498957609451008, 0.8436414176511466, 0.8394718554551772, 0.7588603196664351, 0.06879777623349548, 0.1014593467685893, 0.15774843641417652, 0.1299513551077137, 0.10493398193189715, 0.103544127866574, 0.14107018763029883, 0.11535788742182071, 0.1063238359972203, 0.15844336344683807, 0.2828353022932592, 0.29325920778318276, 0.3092425295343989, 0.3412091730368311, 0.3467685892981237, 0.48992355802640725, 0.5052119527449618, 0.38846421125781794, 0.35719249478804727, 0.28561501042390547, 0.09937456567060458, 0.5538568450312717, 0.5712300208478109, 0.6059763724808895, 0.6546212647671994, 0.7046560111188325, 0.7887421820708825, 0.8353022932592078, 0.8630993745656707, 0.876997915218902, 0.9221681723419041, 0.9395413481584434, 0.9332870048644892, 0.8895066018068103, 0.8686587908269632, 0.8505906879777624, 0.8193189715079917, 0.7109103544127866, 0.6810284920083391, 0.635858234885337, 0.5892981236970118, 0.5649756775538568, 0.5441278665740097, 0.0847810979847116, 0.7734537873523281, 0.07227241139680333, 0.07227241139680333, 0.06949270326615706, 0.06671299513551077, 0.0660180681028492, 0.06323835997220292, 0.06323835997220292, 0.06393328700486449, 0.06532314107018763, 0.06393328700486449, 0.06254343293954134, 0.06532314107018763, 0.06462821403752605, 0.06393328700486449, 0.061153578874218205, 0.061153578874218205, 0.06184850590687978, 0.4739402362751911, 0.06184850590687978, 0.06184850590687978, 0.061153578874218205, 0.06323835997220292, 0.06393328700486449, 0.06323835997220292, 0.09103544127866574, 0.07227241139680333, 0.07227241139680333, 0.07435719249478805, 0.07088255733148019, 0.6414176511466296, 0.6851980542043086, 0.7421820708825573, 0.7553856845031272, 0.7797081306462822, 0.8005559416261293, 0.8255733148019458, 0.8992355802640722, 0.9138290479499652, 0.9263377345378735, 0.9332870048644892, 0.940236275191105, 0.9464906184850591, 0.9464906184850591, 0.9423210562890897, 0.9374565670604587, 0.9305072967338429, 0.9235580264072273, 0.906184850590688, 0.8756080611535789, 0.8088950660180682, 0.7887421820708825, 0.7706740792216817, 0.7477414871438499, 0.7282835302293259, 0.6664350243224462, 0.5844336344683808, 0.19041000694927032, 0.21959694232105628, 0.18763029881862406, 0.1626129256428075, 0.16191799861014594, 0.14176511466296038, 0.14176511466296038, 0.1438498957609451, 0.14107018763029883, 0.31758165392633775, 0.3370396108408617, 0.9291174426685198, 0.886726893676164, 0.13342599027102153, 0.1271716469770674, 0.10771369006254343, 0.1014593467685893, 0.09798471160528145, 0.10076441973592773, 0.2585128561501042, 0.10979847116052814, 0.10701876302988186, 0.10979847116052814, 0.7074357192494788, 0.6177901320361362, 0.5246699096594858, 0.10979847116052814, 0.09937456567060458, 0.09937456567060458, 0.09728978457261987, 0.0965948575399583, 0.2522585128561501, 0.15774843641417652, 0.1535788742182071, 0.15496872828353023, 0.15844336344683807, 0.15844336344683807, 0.11605281445448228, 0.31480194579569143, 0.48019457956914524, 0.5837387074357192, 0.7338429464906184, 0.7609451007644198, 0.7866574009728978, 0.817234190410007, 0.8589298123697012, 0.8999305072967339, 0.9200833912439194, 0.935371785962474, 0.9457956914523975, 0.9485753995830438, 0.9416261292564281, 0.9284225156358582, 0.9096594857539958, 0.8929812369701181, 0.8457261987491314, 0.8019457956914524, 0.7804030576789437, 0.7428769979152189, 0.7192494788047255, 0.5441278665740097, 0.414176511466296, 0.2522585128561501, 0.11605281445448228, 0.1556636553161918, 0.15705350938151494, 0.1202223766504517, 0.9471855455177206, 0.12578179291174427, 0.1299513551077137, 0.1320361362056984, 0.13273106323835998, 0.13620569840166782, 0.14176511466296038, 0.14523974982626825, 0.8999305072967339, 0.15774843641417652, 0.17998610145934676, 0.1646977067407922, 0.08756080611535788, 0.703961084086171, 0.7234190410006949, 0.7678943710910354, 0.8116747741487144, 0.8505906879777624, 0.881862404447533, 0.9027102154273802, 0.9145239749826268, 0.9242529534398888, 0.9388464211257818, 0.9464906184850591, 0.9485753995830438, 0.9437109103544128, 0.9305072967338429, 0.920778318276581, 0.906184850590688, 0.8950660180681028, 0.8665740097289785, 0.8186240444753301, 0.8040305767894371, 0.7352328005559416, 0.7095205003474635, 0.7018763029881863, 0.0847810979847116, 0.0847810979847116, 0.08269631688672689, 0.08269631688672689, 0.08269631688672689, 0.08339124391938846, 0.08339124391938846, 0.08200138985406533, 0.08408617095205004, 0.6935371785962474, 0.13134120917303682, 0.07991660875608061, 0.07922168172341904, 0.07991660875608061, 0.07852675469075747, 0.07852675469075747, 0.0778318276580959, 0.07852675469075747, 0.32453092425295343, 0.7116052814454482, 0.5830437804030577, 0.08408617095205004, 0.07922168172341904, 0.07852675469075747, 0.07991660875608061, 0.07922168172341904, 0.07991660875608061, 0.08061153578874218, 0.08061153578874218, 0.07991660875608061, 0.08061153578874218, 0.07713690062543432, 0.07644197359277276, 0.07713690062543432, 0.07713690062543432, 0.07713690062543432, 0.07644197359277276, 0.07644197359277276, 0.07713690062543432, 0.07574704656011119, 0.07644197359277276, 0.07644197359277276, 0.07644197359277276, 0.07574704656011119, 0.07574704656011119, 0.07574704656011119, 0.07644197359277276, 0.07644197359277276, 0.07644197359277276, 0.07644197359277276, 0.07644197359277276, 0.07644197359277276, 0.07713690062543432, 0.07713690062543432, 0.07713690062543432, 0.0778318276580959, 0.07713690062543432, 0.07713690062543432, 0.0778318276580959, 0.07991660875608061, 0.08269631688672689, 0.08895066018068103, 0.08964558721334259, 0.09034051424600417, 0.09520500347463516, 0.10284920083391244, 0.12161223071577484, 0.16122307157748436, 0.1862404447533009, 0.2592077831827658, 0.2738012508686588, 0.2904794996525365, 0.3328700486448923, 0.35232800555941624, 0.38082001389854064, 0.5309242529534399], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/Ank_3.gap.json

@@ -0,0 +1 @@
+{"family": "Ank_3", "n_seqs": 964, "length": 31, "gap_rates": [0.6887966804979253, 0.27593360995850624, 0.1358921161825726, 0.029045643153526972, 0.0031120331950207467, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.001037344398340249, 0.004149377593360996, 0.0, 0.0, 0.0, 0.001037344398340249, 0.002074688796680498, 0.004149377593360996, 0.8392116182572614, 0.07365145228215768, 0.09024896265560166, 0.10580912863070539, 0.14522821576763487, 0.21058091286307054, 0.3817427385892116, 0.7676348547717843], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/AntA.gap.json

@@ -0,0 +1 @@
+{"family": "AntA", "n_seqs": 138, "length": 88, "gap_rates": [0.15217391304347827, 0.09420289855072464, 0.07246376811594203, 0.07246376811594203, 0.07246376811594203, 0.07246376811594203, 0.07246376811594203, 0.07246376811594203, 0.07246376811594203, 0.07246376811594203, 0.07246376811594203, 0.06521739130434782, 0.9420289855072463, 0.057971014492753624, 0.057971014492753624, 0.050724637681159424, 0.050724637681159424, 0.036231884057971016, 0.036231884057971016, 0.036231884057971016, 0.036231884057971016, 0.34782608695652173, 0.028985507246376812, 0.036231884057971016, 0.021739130434782608, 0.007246376811594203, 0.014492753623188406, 0.07971014492753623, 0.08695652173913043, 0.007246376811594203, 0.007246376811594203, 0.007246376811594203, 0.0, 0.007246376811594203, 0.007246376811594203, 0.0, 0.0, 0.0, 0.0, 0.5072463768115942, 0.7681159420289855, 0.8768115942028986, 0.9130434782608695, 0.927536231884058, 0.9347826086956522, 0.9492753623188406, 0.9492753623188406, 0.9420289855072463, 0.9347826086956522, 0.9202898550724637, 0.8913043478260869, 0.8188405797101449, 0.6304347826086957, 0.4420289855072464, 0.13043478260869565, 0.09420289855072464, 0.07246376811594203, 0.050724637681159424, 0.028985507246376812, 0.036231884057971016, 0.028985507246376812, 0.09420289855072464, 0.8623188405797102, 0.9130434782608695, 0.8405797101449275, 0.057971014492753624, 0.021739130434782608, 0.9492753623188406, 0.036231884057971016, 0.036231884057971016, 0.028985507246376812, 0.028985507246376812, 0.028985507246376812, 0.028985507246376812, 0.028985507246376812, 0.028985507246376812, 0.028985507246376812, 0.028985507246376812, 0.028985507246376812, 0.028985507246376812, 0.036231884057971016, 0.036231884057971016, 0.043478260869565216, 0.043478260869565216, 0.050724637681159424, 0.057971014492753624, 0.13043478260869565, 0.16666666666666666], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/ArAE_1.gap.json

@@ -0,0 +1 @@
+{"family": "ArAE_1", "n_seqs": 542, "length": 143, "gap_rates": [0.6697416974169742, 0.474169741697417, 0.3284132841328413, 0.3081180811808118, 0.24723247232472326, 0.16051660516605165, 0.11254612546125461, 0.042435424354243544, 0.025830258302583026, 0.01845018450184502, 0.01845018450184502, 0.01845018450184502, 0.014760147601476014, 0.014760147601476014, 0.014760147601476014, 0.014760147601476014, 0.014760147601476014, 0.014760147601476014, 0.016605166051660517, 0.01845018450184502, 0.01845018450184502, 0.01845018450184502, 0.014760147601476014, 0.016605166051660517, 0.01107011070110701, 0.01107011070110701, 0.01107011070110701, 0.09225092250922509, 0.01107011070110701, 0.00922509225092251, 0.00922509225092251, 0.00922509225092251, 0.00922509225092251, 0.00922509225092251, 0.007380073800738007, 0.007380073800738007, 0.007380073800738007, 0.005535055350553505, 0.007380073800738007, 0.007380073800738007, 0.007380073800738007, 0.005535055350553505, 0.0036900369003690036, 0.0036900369003690036, 0.0036900369003690036, 0.0036900369003690036, 0.0036900369003690036, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.007380073800738007, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.007380073800738007, 0.007380073800738007, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.0036900369003690036, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.005535055350553505, 0.007380073800738007, 0.007380073800738007, 0.00922509225092251, 0.00922509225092251, 0.00922509225092251, 0.00922509225092251, 0.01107011070110701, 0.01107011070110701, 0.01107011070110701, 0.01107011070110701, 0.00922509225092251, 0.00922509225092251, 0.012915129151291513, 0.014760147601476014, 0.922509225092251, 0.012915129151291513, 0.02029520295202952, 0.012915129151291513, 0.02214022140221402, 0.02952029520295203, 0.027675276752767528, 0.02029520295202952, 0.012915129151291513, 0.01107011070110701, 0.00922509225092251, 0.00922509225092251, 0.014760147601476014, 0.01107011070110701, 0.00922509225092251, 0.01107011070110701, 0.00922509225092251, 0.01107011070110701, 0.033210332103321034, 0.00922509225092251, 0.016605166051660517, 0.016605166051660517, 0.012915129151291513, 0.01845018450184502, 0.5867158671586716, 0.027675276752767528, 0.023985239852398525, 0.00922509225092251, 0.00922509225092251, 0.01107011070110701, 0.01107011070110701, 0.01107011070110701, 0.00922509225092251, 0.00922509225092251, 0.00922509225092251, 0.00922509225092251, 0.00922509225092251, 0.00922509225092251, 0.00922509225092251, 0.00922509225092251, 0.01107011070110701, 0.012915129151291513, 0.016605166051660517, 0.02952029520295203, 0.042435424354243544, 0.13099630996309963, 0.4797047970479705], "gap_symbol": "-", "mismatch_seqs": 0}

pfam_gap_rates/ArAE_2.gap.json

@@ -0,0 +1 @@
+{"family": "ArAE_2", "n_seqs": 238, "length": 281, "gap_rates": [0.5462184873949579, 0.4957983193277311, 0.31512605042016806, 0.31092436974789917, 0.2857142857142857, 0.23949579831932774, 0.23529411764705882, 0.23109243697478993, 0.2184873949579832, 0.21008403361344538, 0.20588235294117646, 0.20588235294117646, 0.20588235294117646, 0.20168067226890757, 0.20168067226890757, 0.20168067226890757, 0.20168067226890757, 0.20168067226890757, 0.19747899159663865, 0.19747899159663865, 0.19747899159663865, 0.19747899159663865, 0.19747899159663865, 0.19747899159663865, 0.19747899159663865, 0.19747899159663865, 0.19747899159663865, 0.19747899159663865, 0.19747899159663865, 0.19747899159663865, 0.19747899159663865, 0.19747899159663865, 0.19747899159663865, 0.19747899159663865, 0.3277310924369748, 0.3067226890756303, 0.38235294117647056, 0.8067226890756303, 0.8277310924369747, 0.8445378151260504, 0.8739495798319328, 0.907563025210084, 0.9243697478991597, 0.9495798319327731, 0.9327731092436975, 0.9201680672268907, 0.8907563025210085, 0.8529411764705882, 0.8403361344537815, 0.8109243697478992, 0.7983193277310925, 0.2689075630252101, 0.3235294117647059, 0.2815126050420168, 0.2815126050420168, 0.2857142857142857, 0.28991596638655465, 0.2815126050420168, 0.2857142857142857, 0.22268907563025211, 0.6932773109243697, 0.7436974789915967, 0.7647058823529411, 0.8781512605042017, 0.9033613445378151, 0.9243697478991597, 0.9327731092436975, 0.9495798319327731, 0.9453781512605042, 0.9327731092436975, 0.9117647058823529, 0.8907563025210085, 0.7773109243697479, 0.7478991596638656, 0.7226890756302521, 0.680672268907563, 0.4117647058823529, 0.35714285714285715, 0.24789915966386555, 0.17647058823529413, 0.16806722689075632, 0.08823529411764706, 0.07983193277310924, 0.06722689075630252, 0.0546218487394958, 0.046218487394957986, 0.037815126050420166, 0.037815126050420166, 0.029411764705882353, 0.025210084033613446, 0.01680672268907563, 0.01680672268907563, 0.02100840336134454, 0.02100840336134454, 0.012605042016806723, 0.012605042016806723, 0.012605042016806723, 0.012605042016806723, 0.012605042016806723, 0.01680672268907563, 0.012605042016806723, 0.012605042016806723, 0.012605042016806723, 0.012605042016806723, 0.012605042016806723, 0.008403361344537815, 0.1134453781512605, 0.01680672268907563, 0.01680672268907563, 0.008403361344537815, 0.008403361344537815, 0.008403361344537815, 0.012605042016806723, 0.012605042016806723, 0.012605042016806723, 0.01680672268907563, 0.01680672268907563, 0.01680672268907563, 0.01680672268907563, 0.01680672268907563, 0.01680672268907563, 0.01680672268907563, 0.02100840336134454, 0.02100840336134454, 0.01680672268907563, 0.01680672268907563, 0.01680672268907563, 0.02100840336134454, 0.01680672268907563, 0.01680672268907563, 0.025210084033613446, 0.025210084033613446, 0.029411764705882353, 0.029411764705882353, 0.037815126050420166, 0.04201680672268908, 0.04201680672268908, 0.046218487394957986, 0.0546218487394958, 0.058823529411764705, 0.4327731092436975, 0.6932773109243697, 0.13445378151260504, 0.21008403361344538, 0.08823529411764706, 0.08403361344537816, 0.07563025210084033, 0.07563025210084033, 0.07563025210084033, 0.07983193277310924, 0.07563025210084033, 0.07983193277310924, 0.07983193277310924, 0.07983193277310924, 0.08403361344537816, 0.09243697478991597, 0.07563025210084033, 0.08823529411764706, 0.09243697478991597, 0.08403361344537816, 0.09243697478991597, 0.10084033613445378, 0.10504201680672269, 0.09663865546218488, 0.07983193277310924, 0.07983193277310924, 0.07563025210084033, 0.07563025210084033, 0.07142857142857142, 0.07142857142857142, 0.07563025210084033, 0.07563025210084033, 0.07563025210084033, 0.07563025210084033, 0.07563025210084033, 0.07563025210084033, 0.07563025210084033, 0.07563025210084033, 0.07563025210084033, 0.07563025210084033, 0.07563025210084033, 0.07563025210084033, 0.07983193277310924, 0.08823529411764706, 0.08403361344537816, 0.09243697478991597, 0.09243697478991597, 0.3907563025210084, 0.35294117647058826, 0.38235294117647056, 0.28991596638655465, 0.2815126050420168, 0.2605042016806723, 0.27310924369747897, 0.2857142857142857, 0.29831932773109243, 0.2857142857142857, 0.2857142857142857, 0.29831932773109243, 0.29411764705882354, 0.29411764705882354, 0.29411764705882354, 0.29831932773109243, 0.31092436974789917, 0.31512605042016806, 0.3319327731092437, 0.8235294117647058, 0.8403361344537815, 0.8529411764705882, 0.8529411764705882, 0.8697478991596639, 0.8949579831932774, 0.9159663865546218, 0.9243697478991597, 0.9327731092436975, 0.9453781512605042, 0.9495798319327731, 0.9411764705882353, 0.9327731092436975, 0.9243697478991597, 0.907563025210084, 0.8823529411764706, 0.8613445378151261, 0.8529411764705882, 0.8445378151260504, 0.8277310924369747, 0.8151260504201681, 0.6764705882352942, 0.6470588235294118, 0.6176470588235294, 0.6050420168067226, 0.5966386554621849, 0.5840336134453782, 0.5798319327731093, 0.5630252100840336, 0.5504201680672269, 0.4579831932773109, 0.44537815126050423, 0.3697478991596639, 0.36554621848739494, 0.3739495798319328, 0.36554621848739494, 0.35294117647058826, 0.35714285714285715, 0.36554621848739494, 0.36554621848739494, 0.3697478991596639, 0.3697478991596639, 0.37815126050420167, 0.37815126050420167, 0.37815126050420167, 0.37815126050420167, 0.37815126050420167, 0.37815126050420167, 0.38235294117647056, 0.38235294117647056, 0.38235294117647056, 0.38235294117647056, 0.38235294117647056, 0.38235294117647056, 0.38235294117647056, 0.38235294117647056, 0.3865546218487395, 0.3865546218487395, 0.3907563025210084, 0.3907563025210084, 0.3907563025210084, 0.39915966386554624, 0.40336134453781514, 0.40336134453781514, 0.40336134453781514, 0.40336134453781514, 0.4117647058823529, 0.4117647058823529, 0.4117647058823529, 0.4117647058823529, 0.4117647058823529, 0.4117647058823529, 0.5210084033613446, 0.6680672268907563, 0.7184873949579832], "gap_symbol": "-", "mismatch_seqs": 0}