enhanced_prompt stringlengths 15 18.1k | enhanced_completion stringlengths 271 169k | Entry stringlengths 6 10 ⌀ | Entry Name stringlengths 7 16 ⌀ | Gene Names stringclasses 89
values | Length int64 10 2.33k ⌀ | Organism stringclasses 34
values | Sequence stringlengths 10 2.33k ⌀ | Target Gene stringclasses 7
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|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
# Task: Process Ebola Virus Protein Sequence Data
## Context
The following dataset contains amino acid sequences for seven key proteins from various Ebola virus genomes, including strains like Zaire and Tai Forest. Each entry provides the protein identifier, name, strain information, and the full sequence intended for... | ### Protein Sequence Analysis: Ebola Virus L Protein (Zaire Strain)
**1. Extracted Metadata and Sequence Metrics**
* **Protein Name:** L (RNA-dependent RNA Polymerase)
* **Viral Strain:** Zaire ebolavirus
* **Accession/Identifier:** A0A0U3V7L4 (UniProtKB), A0A0U3V7L4_9MONO (Entry ID)
* **Sequence Length:** 2,... | A0A0U3V7L4 | A0A0U3V7L4_9MONO | L | 2,212 | Zaire ebolavirus | MATQHTQYPDARLSSPIVLDQCDLVTRACGLYSSYSLNPQLRNCKLPKHIYRLKYDVTVTKFLSDVPVATLPIDFIVPILLKALSGNGFCPVEPRCQQFLDEIIKYTMQDALFLKYYLKNVGAQEDCVDDHFQEKILSSIQGNEFLHQMFFWYDLAILTRRGRLNRGNSRSTWFVHDDLIDILGYGDYVFWKIPISLLPLNTQGIPHAAMDWYQTSVFKEAVQGHTHIVSVSTADVLIMCKDLITCRFNTTLISKIAEVEDPVCSDYPNFKIVSMLYQSGDYLLSILGSDGYKIIKFLEPLCLAKIQLCSKYTERKGRFL... | L | 0.02416 | -0.117031 | 0.1478 | 0.071767 | 0.071582 | -0.070765 | 0.047333 | 0.050196 | 0.096649 | -0.007872 | -0.015778 | -0.051669 | -0.066157 | 0.185522 | -0.044487 | 0.103679 | 0.067166 | -0.014858 | 0.102827 | 0.165879 | -0.029458 | 0.283797 | -0.133665 | 0.096215 | 0.020159 | 0.118742 | 0.091414 | 0.268701 | -0.037465 | 0.19093 | 0.005448 | 0.045194 | -0.151066 | -0.119171 | -0.063049 | 0.182889 | 0.128892 | -0.115321 | -0.011208 | 0.115151 | 0.248466 | -0.152244 | -0.149137 | 0.018011 | -0.133925 | -0.227366 | 0.140525 | 0.166748 | -0.209591 | 0.121623 | -0.018612 | -0.00726 | -0.048114 | 0.0271 | 0.135278 | -0.233433 | 0.206378 | -0.138334 | 0.008363 | -0.053254 | -0.230154 | -0.18349 | -0.048138 | 0.037244 | 0.123707 | -0.036352 | -0.067334 | 0.063734 | 0.154433 | -0.069033 | -0.078788 | -0.139518 | 0.094649 | -0.047642 | -0.197267 | 0.126321 | -0.122431 | 0.060048 | 0.055473 | 0.055708 | 0.085771 | 0.051075 | 0.051273 | -0.002873 | 0.109948 | 0.081733 | 0.141029 | -0.010538 | -0.031632 | -0.139241 | -0.065073 | 0.241036 | -0.313338 | 0.000243 | 0.024974 | -0.088072 | -0.006621 | -0.260387 | 0.141983 | -0.047562 | -0.086543 | 0.16678 | -0.010747 | 0.059657 | 0.431192 | 0.13658 | 0.032017 | 0.127293 | -0.225418 | 0.094007 | 0.172541 | 0.208675 | 0.0367 | -0.028398 | -0.069935 | 0.162123 | 0.175045 | 0.042676 | -0.013945 | 0.111836 | -0.101794 | -0.253709 | 0.035374 | 0.203799 | 0.147698 | 0.065835 | -0.124838 | -0.096402 | -0.021927 | -0.064386 | 0.134353 | 0.013678 | 0.041433 | -0.021685 | -0.10101 | 0.024901 | -0.257668 | -0.033317 | 0.15459 | -0.011327 | 0.041632 | -0.000708 | -0.151001 | -0.013861 | -0.058402 | 0.145394 | -0.033147 | 0.003432 | 0.047908 | 0.071913 | -0.125552 | 0.124236 | 0.075088 | 0.162023 | -0.001735 | 0.041909 | 0.158861 | 0.04432 | -0.125324 | -0.168008 | 0.016993 | -0.054986 | -0.036741 | 0.06626 | 0.217618 | 0.058737 | 0.033585 | 0.026092 | 0.230108 | -0.028692 | -0.099659 | -0.120209 | -0.119586 | -0.039158 | 0.063753 | 0.048941 | 0.050772 | 0.267715 | 0.074229 | -0.050467 | 0.025307 | -0.09897 | -0.037285 | -0.096475 | 0.002295 | 0.179285 | -0.009981 | -0.190662 | 0.15546 | -0.00129 | 0.016591 | -0.002864 | 0.026829 | -0.039807 | 0.074161 | -0.036993 | -0.024885 | 0.045902 | -0.02073 | 0.099927 | -0.048991 | 0.103545 | -0.0233 | 0.03026 | 0.307398 | -0.006558 | 0.185239 | 0.184589 | -0.106946 | -0.060198 | 0.069019 | 0.014736 | 0.167147 | -0.076435 | -0.010641 | 0.146195 | 0.039456 | -0.093363 | -0.083892 | -0.202635 | 0.014737 | -0.211183 | 0.078739 | 0.067416 | -0.084073 | -0.03148 | -0.186823 | -0.089485 | 0.079841 | -0.060663 | -0.058401 | -0.122575 | -0.082053 | -0.085782 | -0.096277 | 0.103348 | 0.074302 | -0.07785 | 0.060261 | 0.091578 | 0.080726 | 0.006905 | -0.092469 | 0.095961 | -0.010131 | 0.095937 | 0.102455 | -0.132366 | 0.126069 | -0.209085 | 0.093668 | -0.092633 | 0.139323 | 0.1234 | 0.08485 | -0.044614 | 0.081173 | 0.070105 | 0.030735 | -0.032361 | 0.133346 | -1.327333 | 0.128887 | -0.144554 | -0.101049 | -0.111619 | -0.01718 | 0.087482 | -0.013034 | 0.116886 | -0.089617 | -0.159638 | 0.213425 | 0.016908 | 0.192385 | -0.125815 | -0.015122 | -0.008562 | 0.010716 | -5.177773 | -0.152917 | -0.036 | 0.051834 | 0.104374 | 0.095794 | -0.176984 | 0.124473 | -0.097428 | -0.265564 | 0.115272 | -0.024881 | 0.185849 | -0.125376 | -0.00254 | 0.088236 | 0.070399 | -0.041812 | -0.040869 | -0.096226 | 0.028358 | 0.106364 | 0.012996 | -0.014955 | -0.073907 | -0.091627 | 0.008209 | -0.012787 | -0.029876 | 0.035295 | -0.126052 | -0.125641 | -0.058307 | 0.026234 | 0.11126 | -0.092439 | 0.205537 | 0.032341 | 0.007535 | 0.00826 | -0.119781 |
# Task: Process Ebola Virus Protein Sequence Data
## Context
The following dataset contains amino acid sequences for seven key proteins from various Ebola virus genomes, including strains like Zaire and Tai Forest. Each entry provides the protein identifier, name, strain information, and the full sequence intended for... | ### Ebola Virus Protein Sequence Data Extraction and Validation Report
**Entry Analysis: VP35 (Zaire ebolavirus)**
The provided raw data block has been parsed, validated against standard IUPAC amino acid conventions, and structured for downstream embedding generation (e.g., ESM-2, ProtT5).
#### 1. Validation Metrics... | A0A8G0KIE4 | A0A8G0KIE4_9MONO | VP35 | 324 | Zaire ebolavirus | DRMPGPELSGWISEQLMTGRIPVSDIFCDIENNPGLCHVSQMQQTKPNPKTRNSQTQTDPMCNHSFEEVVQTLASLATVVQQQTIASESLEQRITSLENGLKPVYDMAKTISSLNRVCAEMVAKYDLLVMTTGRATATAAATEAYWAEHGQPPPGPSLYEESTIRGKIESRDETVPQSVREAFNNLDSTTSLTEENFGKPDISAKDLRNIMYDHLPGFGTAFHQLVQVICKLGKDSNSLDIIHAEFQASLAEGDSPQCALIQITKRGVPIFQDAAPPVIHIRSRGDIPRACQKSLRPVPPSPKIDRGWVCVFQLQDGKTL... | VP35 | -0.00643 | -0.149377 | 0.000458 | 0.161956 | -0.097084 | 0.118406 | -0.006643 | 0.08566 | 0.058394 | 0.0405 | 0.078785 | 0.038114 | -0.029755 | 0.161723 | -0.009101 | 0.201545 | 0.113816 | 0.004757 | 0.06626 | 0.065588 | 0.06158 | 0.224626 | -0.042363 | 0.199156 | -0.155481 | 0.184509 | 0.180615 | 0.295667 | 0.081825 | 0.144201 | -0.154253 | -0.102166 | -0.196785 | -0.081227 | 0.11926 | 0.235368 | 0.121755 | -0.026658 | -0.147031 | 0.059543 | 0.124212 | -0.060459 | -0.030244 | -0.053777 | -0.076901 | -0.252783 | 0.034489 | 0.079614 | -0.092142 | 0.045952 | 0.077287 | 0.017677 | 0.067646 | -0.058177 | 0.176319 | -0.015042 | 0.121226 | -0.102099 | 0.136304 | -0.137794 | -0.177747 | -0.105888 | -0.09881 | -0.00967 | 0.124835 | 0.055273 | -0.053835 | 0.14108 | 0.123671 | 0.075105 | -0.080879 | 0.113685 | -0.071525 | -0.009777 | -0.066599 | -0.002419 | -0.161698 | -0.130579 | -0.035542 | -0.097812 | 0.112711 | -0.060493 | 0.083002 | 0.042909 | 0.006569 | 0.097995 | 0.120357 | -0.056262 | -0.037868 | -0.145637 | 0.003644 | 0.301482 | -0.269864 | 0.028799 | -0.030095 | 0.02645 | -0.064127 | -0.231538 | 0.216563 | -0.02343 | -0.12888 | -0.001482 | 0.0161 | 0.079543 | 0.328312 | 0.053654 | 0.215329 | 0.104087 | -0.251885 | 0.131669 | 0.212163 | 0.324569 | 0.016798 | 0.114299 | -0.071576 | -0.024908 | 0.009032 | -0.036683 | -0.016778 | 0.043843 | -0.104745 | -0.054158 | 0.019973 | 0.050466 | 0.066029 | -0.051797 | -0.089486 | -0.120473 | -0.03434 | 0.102499 | 0.04412 | -0.091627 | -0.171512 | -0.095676 | 0.01555 | -0.011626 | -0.226339 | -0.008035 | 0.202395 | -0.078144 | -0.062251 | 0.002996 | -0.047142 | 0.021622 | -0.057321 | -0.043476 | 0.025637 | -0.074215 | 0.130326 | 0.12685 | -0.14472 | 0.143013 | -0.036992 | -0.005611 | 0.052812 | -0.07656 | -0.158086 | 0.019357 | -0.090973 | -0.214807 | -0.006736 | -0.023166 | 0.01221 | 0.072984 | -0.019264 | 0.019685 | -0.012426 | 0.049804 | 0.101844 | -0.10811 | -0.016011 | -0.053414 | -0.12192 | -0.043531 | 0.056127 | 0.031138 | -0.104835 | 0.13197 | 0.136116 | 0.043453 | 0.045333 | -0.044069 | -0.209383 | -0.038466 | 0.060619 | 0.148008 | -0.040057 | -0.292967 | 0.034623 | -0.05836 | -0.089443 | 0.009192 | 0.055057 | 0.00562 | 0.051933 | -0.004535 | -0.035162 | 0.09204 | 0.034497 | -0.035031 | -0.118413 | 0.046313 | -0.138495 | -0.076099 | 0.224755 | -0.005537 | 0.099183 | 0.1486 | -0.056125 | 0.012097 | 0.054757 | 0.061376 | 0.179912 | -0.043002 | -0.09421 | 0.128611 | -0.049343 | -0.063494 | -0.007939 | -0.116097 | -0.074672 | -0.140699 | 0.103343 | -0.062512 | -0.117795 | -0.068432 | -0.232766 | 0.050377 | 0.071865 | 0.079354 | -0.091898 | -0.073928 | -0.054345 | -0.02044 | -0.19365 | 0.031869 | 0.021258 | -0.022945 | 0.141981 | 0.187883 | 0.079413 | -0.006326 | -0.042377 | 0.124934 | -0.096431 | -0.043344 | -0.004514 | -0.079452 | 0.263622 | -0.185301 | 0.103765 | -0.004747 | 0.342027 | 0.056673 | 0.008894 | 0.090467 | 0.078518 | 0.21045 | -0.029731 | -0.039363 | 0.092985 | -0.961398 | 0.061302 | -0.179819 | -0.087147 | -0.074146 | -0.077539 | 0.256416 | -0.007175 | 0.105555 | 0.124391 | -0.166516 | 0.175155 | 0.023731 | 0.256135 | 0.094239 | 0.014854 | -0.076967 | 0.153408 | -4.998911 | -0.171245 | -0.051841 | -0.042905 | -0.02295 | 0.308833 | -0.047604 | 0.024784 | -0.000975 | -0.189867 | 0.039498 | 0.046819 | 0.145022 | -0.101027 | 0.024301 | 0.11808 | 0.123292 | -0.182312 | 0.023654 | 0.011252 | 0.103784 | 0.012038 | -0.000199 | -0.026315 | -0.02067 | -0.092964 | 0.19368 | 0.112932 | -0.028315 | -0.008506 | -0.117403 | -0.028568 | -0.052955 | 0.019915 | 0.037883 | -0.115331 | 0.089515 | -0.006314 | 0.089715 | 0.135259 | -0.107139 |
# Task: Process Ebola Virus Protein Data for Embedding Generation
## Context
The following dataset contains amino acid sequences for seven key proteins from various Ebola virus genomes, including strains like Zaire and Tai Forest. Each entry provides the protein identifier, name, strain information, and the full seque... | ### Protein Data Parsing and Validation Report: Ebola Virus VP24
**1. Data Parsing Results**
The raw input entry has been decomposed into the following structured fields:
* **Protein Identifier (UniProtKB):** A0A141M7D4
* **Unique Strain Code/Entry Name:** A0A141M7D4_9MONO
* **Protein Name:** VP24 (Viral Protei... | A0A141M7D4 | A0A141M7D4_9MONO | VP24 | 239 | Zaire ebolavirus | PKKDLEKGVVLSDLCNFLVSQTIQGWKVYWAGIEFDVTHKGMALLQRLKTNDFAPAWSMTRNLFPHLFQNPNSTIESPLWALRVILAAGIQDQLIDQSLIEPLAGALGLISDWLLTTNTNHFNMRTQRVKEQLSLKMLSLIRSNILKFINKLDALHVVNYNGLLSSIEIGTQNHTIIITRTNMGFLVELQEPDKSAMNRKKPGPAKFSLLHESTLKAFTQGSSTRMQSLILEFNSSLAI | VP24 | 0.009168 | -0.127584 | 0.118529 | 0.068116 | 0.024725 | -0.106927 | -0.009349 | 0.112083 | -0.025942 | 0.035094 | -0.063331 | -0.074147 | -0.095361 | 0.225595 | -0.0106 | 0.200498 | 0.038299 | 0.021661 | 0.095155 | 0.178593 | -0.093342 | 0.158843 | -0.09173 | 0.038093 | -0.024461 | 0.028708 | 0.014377 | 0.198249 | -0.177439 | 0.194743 | 0.119634 | 0.023727 | -0.148768 | -0.045508 | 0.053242 | 0.218531 | 0.104242 | -0.12695 | 0.070253 | 0.176128 | 0.20368 | -0.106069 | -0.167121 | -0.024787 | -0.108567 | -0.175063 | 0.073587 | 0.175809 | -0.152395 | 0.066386 | -0.064838 | 0.058493 | -0.003182 | 0.045879 | 0.104605 | -0.151338 | 0.208506 | -0.1871 | 0.037252 | -0.101827 | -0.26713 | -0.203166 | -0.151582 | -0.036953 | 0.105526 | -0.009616 | -0.072042 | 0.118953 | 0.122032 | -0.085477 | -0.009004 | -0.07222 | 0.066693 | 0.068005 | -0.186742 | 0.030666 | -0.143051 | 0.065932 | 0.093143 | 0.011875 | 0.0302 | 0.140779 | 0.036885 | -0.080739 | 0.176197 | 0.140194 | 0.086083 | 0.028432 | -0.060103 | -0.129068 | 0.031754 | 0.221337 | -0.189683 | -0.004669 | 0.003122 | -0.08934 | 0.001983 | -0.210738 | 0.137794 | 0.015593 | -0.076349 | 0.011076 | 0.037631 | 0.022761 | 0.415311 | 0.106705 | 0.017257 | 0.149485 | -0.121052 | 0.08112 | 0.28937 | 0.237015 | 0.122862 | -0.073139 | -0.069939 | 0.096055 | 0.173565 | 0.07263 | 0.035153 | 0.021582 | -0.086735 | -0.318633 | -0.002402 | 0.088072 | 0.154238 | 0.035221 | -0.058884 | -0.087075 | 0.030989 | 0.005012 | 0.075518 | -0.000397 | -0.048744 | -0.06471 | -0.048271 | 0.035441 | -0.179656 | -0.031871 | 0.197521 | -0.085783 | 0.025957 | 0.010749 | -0.108805 | 0.029061 | -0.04757 | 0.138684 | -0.043941 | 0.046624 | -0.086273 | 0.131842 | -0.100656 | 0.077317 | 0.025559 | 0.08033 | -0.057682 | 0.037765 | 0.034958 | 0.118752 | -0.087988 | -0.170084 | -0.028075 | 0.085626 | -0.026228 | 0.077794 | 0.227381 | 0.074576 | -0.0031 | 0.088365 | 0.188127 | 0.082836 | -0.127322 | -0.053908 | -0.068882 | 0.065674 | 0.106952 | 0.012845 | 0.009264 | 0.225931 | -0.008911 | -0.026345 | 0.031001 | -0.044463 | -0.098636 | -0.132316 | 0.016898 | 0.087537 | 0.042275 | -0.341444 | 0.038834 | -0.026825 | 0.004377 | -0.072875 | 0.04935 | -0.003791 | 0.138125 | -0.036452 | -0.069789 | 0.044541 | -0.012451 | 0.091304 | -0.025174 | 0.083928 | -0.018203 | -0.058183 | 0.122548 | -0.021683 | 0.106216 | 0.169813 | -0.064151 | -0.133445 | 0.083722 | -0.009995 | 0.081933 | -0.091028 | 0.055716 | 0.21174 | 0.016738 | -0.034027 | -0.096493 | -0.139352 | 0.041037 | -0.111169 | 0.05947 | -0.043115 | -0.073232 | 0.008655 | -0.205134 | -0.044254 | 0.014738 | -0.012855 | 0.004631 | -0.11634 | 0.021275 | -0.058315 | -0.104681 | -0.029493 | 0.103605 | -0.040288 | 0.09971 | 0.099405 | 0.133453 | 0.041985 | -0.149214 | 0.113311 | 0.004432 | 0.009502 | 0.032367 | 0.002162 | 0.173223 | -0.254052 | 0.186603 | -0.060886 | 0.202488 | 0.12416 | 0.082245 | -0.041629 | 0.096537 | 0.144507 | 0.086186 | -0.03773 | 0.112899 | -1.199342 | 0.156679 | -0.137382 | -0.110989 | -0.116028 | -0.041349 | 0.04622 | -0.008898 | 0.104142 | -0.017233 | -0.167585 | 0.227586 | 0.012525 | 0.075153 | -0.088756 | -0.018794 | -0.075971 | -0.045355 | -5.287353 | -0.085254 | -0.04932 | 0.019751 | 0.059556 | 0.000535 | -0.140292 | 0.088641 | -0.023969 | -0.182395 | 0.04186 | 0.06064 | 0.190937 | -0.017537 | 0.087506 | 0.097226 | 0.135349 | -0.022083 | -0.000602 | -0.027753 | -0.005743 | 0.164371 | 0.097523 | 0.048613 | -0.022469 | -0.17996 | 0.068901 | -0.024799 | 0.000777 | 0.034583 | -0.098294 | -0.09324 | -0.146279 | 0.061102 | 0.114162 | -0.104294 | 0.110956 | -0.071832 | 0.085587 | 0.026803 | -0.066335 |
# Task: Process Ebola Virus Protein Sequence Data
## Context
The following dataset contains amino acid sequences for seven key proteins from various Ebola virus genomes, including strains like Zaire and Tai Forest. Each entry provides the protein identifier, name, strain information, and the full sequence. This data i... | ```json
[
{
"accession_id": "A0A2I4PEA1",
"entry_name": "A0A2I4PEA1_9MONO",
"protein_name": "L",
"organism_strain": "Zaire ebolavirus",
"sequence_length": 2212,
"sequence": "MATQHTQYPDARLSSPIVLDQCDLVTRACGLYSSYSLNPQLRNCKLPKHIYRLKYDVTVTKFLSDVPVATLPIDFIVPILLKALSGNGFCPVEPRCQQFLDEIIKYTMQDALFLKYYLKN... | A0A2I4PEA1 | A0A2I4PEA1_9MONO | L | 2,212 | Zaire ebolavirus | MATQHTQYPDARLSSPIVLDQCDLVTRACGLYSSYSLNPQLRNCKLPKHIYRLKYDVTVTKFLSDVPVATLPIDFIVPILLKALSGNGFCPVEPRCQQFLDEIIKYTMQDALFLKYYLKNVGAQEDCVDDHFQEKILSSIQGNEFLHQMFFWYDLAILTRRGRLNRGNSRSTWFVHDDLIDILGYGDYVFWKIPISLLPLNTQGIPHAAMDWYQTSVFKEAVQGHTHIVSVSTADVLIMCKDLITCRFNTTLISKIAEVEDPVCSDYPNFKIVSMLYQSGDYLLSILGSDGYKIIKFLEPLCLAKIQLCSKYTERKGRFL... | L | 0.030703 | -0.121887 | 0.154246 | 0.082551 | 0.048582 | -0.051073 | 0.025795 | 0.073706 | 0.127418 | -0.020515 | -0.060778 | -0.061523 | -0.08078 | 0.164901 | -0.052233 | 0.129858 | 0.054075 | 0.006163 | 0.112949 | 0.16891 | -0.026898 | 0.260523 | -0.160405 | 0.09381 | 0.021074 | 0.107853 | 0.087269 | 0.273137 | -0.025761 | 0.167513 | 0.002394 | 0.068592 | -0.168069 | -0.111175 | -0.093056 | 0.176042 | 0.129524 | -0.143701 | -0.013042 | 0.136662 | 0.269296 | -0.133609 | -0.129396 | 0.010163 | -0.116708 | -0.210859 | 0.088552 | 0.165005 | -0.207844 | 0.10922 | -0.011065 | 0.000961 | -0.052256 | 0.007871 | 0.128255 | -0.226568 | 0.202929 | -0.152806 | -0.011638 | -0.043096 | -0.20574 | -0.165539 | -0.063084 | 0.004787 | 0.116768 | -0.024789 | -0.059939 | 0.077688 | 0.160575 | -0.052792 | -0.05322 | -0.107016 | 0.073948 | -0.07293 | -0.194331 | 0.125928 | -0.119369 | 0.038272 | 0.069615 | 0.048365 | 0.101945 | 0.021058 | 0.034829 | -0.003452 | 0.124531 | 0.064761 | 0.145403 | -0.003516 | -0.02574 | -0.142572 | -0.038081 | 0.257136 | -0.326247 | 0.00235 | 0.035597 | -0.081287 | -0.006686 | -0.279222 | 0.14144 | -0.054844 | -0.09417 | 0.182626 | -0.037986 | 0.096795 | 0.384606 | 0.123689 | -0.005022 | 0.112216 | -0.185459 | 0.085579 | 0.164843 | 0.225633 | 0.069044 | -0.029733 | -0.068333 | 0.167451 | 0.195274 | 0.052604 | -0.006569 | 0.126694 | -0.115027 | -0.300066 | 0.003066 | 0.197582 | 0.12208 | 0.051596 | -0.141508 | -0.102117 | -0.014396 | -0.07499 | 0.141015 | 0.017786 | 0.01636 | -0.031146 | -0.109637 | 0.035251 | -0.251639 | -0.008589 | 0.140276 | -0.009112 | 0.03271 | -0.006885 | -0.192555 | -0.018547 | -0.071519 | 0.152449 | -0.039214 | -0.026697 | 0.030255 | 0.087261 | -0.112371 | 0.118 | 0.067644 | 0.163169 | 0.007143 | 0.06473 | 0.131686 | 0.056472 | -0.10128 | -0.170548 | 0.030027 | -0.037425 | -0.046473 | 0.071662 | 0.234886 | 0.071278 | 0.02148 | 0.022677 | 0.247755 | -0.063643 | -0.099482 | -0.111066 | -0.123988 | -0.092923 | 0.063434 | 0.081549 | 0.04449 | 0.251279 | 0.05563 | -0.061297 | 0.016285 | -0.08929 | -0.055432 | -0.100457 | 0.003523 | 0.169806 | 0.005646 | -0.137647 | 0.141295 | -0.023207 | 0.01228 | -0.004542 | 0.032942 | -0.028311 | 0.071461 | -0.043458 | -0.037228 | 0.056865 | -0.022349 | 0.108281 | -0.040104 | 0.10988 | -0.040703 | 0.017396 | 0.29037 | -0.008521 | 0.150827 | 0.173102 | -0.114996 | -0.062208 | 0.051286 | 0.015032 | 0.176175 | -0.087436 | -0.03632 | 0.109037 | 0.0528 | -0.07605 | -0.081484 | -0.173334 | 0.013937 | -0.216163 | 0.116201 | 0.053611 | -0.091557 | -0.020288 | -0.190843 | -0.086326 | 0.087673 | -0.076027 | -0.023302 | -0.138213 | -0.081405 | -0.08702 | -0.069521 | 0.077406 | 0.099024 | -0.053241 | 0.052521 | 0.079072 | 0.072729 | 0.007517 | -0.0723 | 0.099525 | 0.036413 | 0.079841 | 0.07729 | -0.152386 | 0.129347 | -0.224891 | 0.096064 | -0.108713 | 0.18908 | 0.150679 | 0.083536 | -0.039532 | 0.081998 | 0.078136 | 0.02993 | 0.037697 | 0.157613 | -1.277302 | 0.127787 | -0.17097 | -0.088718 | -0.085208 | -0.007046 | 0.085682 | 0.00118 | 0.113893 | -0.078445 | -0.121016 | 0.193576 | 0.051706 | 0.186459 | -0.10525 | 0.005541 | -0.000855 | 0.019749 | -5.096105 | -0.147756 | -0.046824 | 0.045948 | 0.067756 | 0.079752 | -0.165531 | 0.118156 | -0.113272 | -0.233499 | 0.096334 | -0.042295 | 0.177398 | -0.114885 | -0.005386 | 0.05215 | 0.022253 | -0.029968 | 0.001108 | -0.078283 | 0.023514 | 0.143596 | -0.005372 | -0.008487 | -0.095029 | -0.064433 | 0.002363 | -0.018182 | -0.020077 | 0.053341 | -0.141437 | -0.125083 | -0.049471 | 0.005537 | 0.087698 | -0.083629 | 0.18516 | 0.045714 | 0.000473 | 0.017081 | -0.113912 |
You are an expert bioinformatician. Below is a dataset containing amino acid sequences for seven key proteins from various Ebola virus genomes (including strains like Zaire and Tai Forest). Each entry provides the protein identifier, name, strain information, and the full sequence intended for generating embeddings usi... | The provided data entry follows a structured format typical for protein sequence repositories, containing metadata fields followed by the primary amino acid sequence. The structure is parsed as follows:
1. **Accession/Identifier**: `A0A8G0NZH9` (UniProtKB accession).
2. **Entry Name**: `A0A8G0NZH9_9MONO`.
3. **Prot... | A0A8G0NZH9 | A0A8G0NZH9_9MONO | GP | 290 | Zaire ebolavirus | MGATGILQLPRDRFKRTSFFLWVIILFQRTFSIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGAATDVPSATKRWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYTSGKRSNTTGKLIWKVNPEIDTTIGEWAF | GP | 0.045062 | -0.046208 | 0.229359 | 0.107573 | 0.030755 | 0.021754 | 0.093129 | 0.029474 | 0.067633 | -0.031289 | 0.09645 | -0.112336 | -0.060411 | 0.195509 | -0.096885 | 0.082012 | 0.119798 | 0.047308 | -0.014478 | 0.026756 | 0.045514 | 0.099239 | -0.225142 | 0.087436 | 0.034435 | -0.02077 | 0.10201 | 0.154321 | 0.10173 | 0.000412 | -0.006202 | 0.021667 | -0.01547 | -0.236489 | 0.049044 | 0.018976 | 0.029599 | -0.215639 | 0.048478 | 0.14709 | 0.07924 | 0.02148 | -0.155089 | 0.083871 | -0.119438 | -0.218248 | 0.122549 | 0.163719 | -0.131095 | 0.102465 | -0.067998 | -0.013219 | -0.072205 | 0.05067 | 0.030492 | -0.248862 | 0.009527 | -0.125061 | -0.092498 | -0.071179 | -0.002902 | -0.255947 | -0.069764 | 0.086365 | -0.001374 | 0.072362 | -0.060338 | 0.146382 | 0.079058 | -0.171342 | -0.077517 | 0.146534 | 0.10431 | -0.02983 | -0.020998 | 0.025117 | -0.065394 | -0.05162 | 0.012644 | -0.016552 | 0.09397 | 0.08038 | -0.002543 | -0.030693 | 0.080601 | 0.052167 | 0.06956 | -0.009256 | -0.07781 | -0.189558 | -0.036066 | 0.239943 | -0.293224 | 0.1084 | -0.024017 | 0.008143 | 0.056023 | -0.156366 | 0.167075 | 0.070323 | -0.173324 | 0.024603 | -0.124287 | 0.102677 | 0.236165 | 0.179769 | -0.059265 | 0.195903 | -0.074321 | 0.081342 | 0.121722 | 0.152562 | 0.130462 | -0.003168 | -0.064845 | 0.285952 | 0.07936 | 0.160179 | -0.062157 | 0.094149 | 0.005655 | -0.019644 | -0.004061 | 0.181354 | 0.045224 | 0.016198 | -0.072977 | -0.152886 | 0.071858 | 0.042809 | 0.17911 | -0.115649 | 0.111327 | -0.054362 | -0.08785 | 0.008497 | -0.231194 | -0.101017 | 0.211065 | 0.018514 | 0.050633 | 0.070427 | -0.091708 | -0.028532 | -0.000458 | 0.080397 | -0.009143 | -0.032126 | -0.028291 | 0.108182 | 0.02646 | 0.140967 | 0.147464 | 0.069747 | -0.052007 | 0.06549 | 0.07797 | 0.078129 | -0.186156 | -0.085981 | 0.149681 | -0.080012 | 0.007719 | 0.030256 | 0.139115 | 0.061209 | -0.000421 | 0.070813 | 0.220074 | -0.022859 | -0.040583 | -0.054783 | -0.04703 | -0.076035 | 0.078848 | -0.066065 | 0.024064 | 0.087167 | 0.005702 | 0.019523 | -0.02093 | -0.007426 | 0.007822 | 0.027887 | 0.076091 | 0.161274 | -0.20043 | -0.148177 | 0.162567 | -0.02153 | 0.033037 | 0.106031 | 0.123553 | 0.025592 | 0.09794 | -0.100196 | 0.001566 | -0.051604 | -0.030675 | 0.036797 | 0.045657 | 0.063889 | -0.04972 | -0.077572 | 0.234523 | 0.057564 | 0.197822 | 0.238179 | -0.113073 | -0.012276 | 0.003794 | -0.025782 | 0.12916 | -0.160175 | -0.099228 | 0.202977 | 0.171635 | 0.006893 | -0.191141 | -0.160491 | -0.027185 | -0.33054 | 0.160868 | 0.138121 | -0.060757 | 0.032219 | 0.024846 | -0.06839 | 0.13407 | -0.07327 | -0.191568 | -0.090319 | -0.060858 | -0.120992 | -0.09333 | 0.103884 | 0.168952 | -0.047029 | 0.141162 | 0.055629 | -0.012235 | -0.109498 | -0.021695 | 0.044667 | 0.087874 | 0.072575 | 0.101304 | -0.217281 | 0.034935 | -0.193009 | 0.118738 | -0.078279 | 0.150565 | 0.108487 | 0.177977 | -0.144766 | 0.096293 | 0.10552 | 0.161426 | -0.169974 | 0.006134 | -1.321343 | 0.163561 | -0.191833 | -0.097542 | -0.084542 | -0.068826 | 0.04578 | 0.012434 | 0.112121 | -0.04476 | -0.215823 | 0.167636 | 0.104646 | 0.038952 | -0.144223 | -0.055088 | -0.01919 | -0.065048 | -5.199417 | -0.169027 | 0.01754 | -0.011692 | -0.074511 | 0.134445 | -0.100996 | 0.163001 | -0.056461 | -0.214497 | 0.105577 | -0.151413 | 0.035045 | -0.042649 | -0.01606 | 0.070738 | -0.087005 | -0.083905 | -0.024205 | -0.002473 | 0.193044 | 0.023742 | 0.070516 | 0.096355 | -0.067009 | -0.01545 | 0.103124 | 0.004339 | -0.094391 | 0.238539 | -0.143325 | -0.029166 | -0.001102 | 0.009063 | 0.234658 | -0.243706 | 0.205813 | 0.016403 | 0.124061 | -0.004079 | -0.059019 |
# Task: Process Ebola Virus Protein Dataset for Embedding Generation
## Context
The following dataset contains amino acid sequences for seven key proteins from various Ebola virus genomes, including strains like Zaire and Tai Forest. Each entry provides the protein identifier, name, strain information, and the full se... | ```json
[
{
"protein_identifier": "A0A3G2XEL4",
"strain_variant_name": "A0A3G2XEL4_9MONO",
"protein_name": "GP",
"virus_strain": "Zaire ebolavirus",
"amino_acid_sequence": "GVTGILQLPRDRFKKTSFFLWVIILFQRTFSIPLGVIHNSTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAP... | A0A3G2XEL4 | A0A3G2XEL4_9MONO | GP | 296 | Zaire ebolavirus | GVTGILQLPRDRFKKTSFFLWVIILFQRTFSIPLGVIHNSTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGFRSGVPPKVVNYEAGEWAENCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYXTXXXYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYTSGKRSNTXXXXXXXXXXXXXXXIGEWAFWETKKPH | GP | 0.106249 | -0.175083 | 0.243893 | 0.036712 | -0.061469 | 0.082355 | -0.062811 | 0.176147 | 0.197504 | -0.103325 | -0.114784 | -0.197521 | -0.250702 | 0.145584 | -0.101042 | 0.166275 | 0.045529 | 0.097797 | 0.058347 | 0.114851 | -0.029601 | -0.054201 | -0.327223 | 0.066604 | 0.092978 | -0.091044 | 0.148518 | 0.123079 | 0.122746 | -0.066149 | -0.019672 | 0.0837 | -0.106499 | -0.160879 | -0.164001 | 0.02212 | 0.000656 | -0.282723 | 0.116197 | 0.227498 | 0.345332 | 0.062484 | -0.017624 | -0.087923 | -0.000525 | -0.055197 | -0.194412 | 0.256733 | -0.118588 | 0.008538 | -0.021545 | 0.076504 | -0.191541 | -0.106563 | 0.000111 | -0.172616 | 0.011714 | -0.192457 | -0.164415 | 0.059172 | 0.02682 | -0.208273 | -0.060028 | -0.213821 | -0.035358 | 0.103998 | 0.022388 | 0.282614 | 0.128401 | -0.021151 | 0.064336 | 0.20525 | -0.079886 | -0.080487 | 0.002322 | 0.058018 | 0.002881 | -0.188036 | 0.117827 | 0.023705 | 0.117709 | 0.029861 | -0.04585 | 0.036696 | 0.089709 | 0.064965 | 0.110848 | -0.022293 | -0.014924 | -0.166941 | 0.117231 | 0.27823 | -0.364056 | 0.106787 | 0.070622 | -0.023676 | 0.028432 | -0.209721 | 0.193041 | -0.065734 | -0.091888 | -0.02355 | -0.214154 | 0.318594 | -0.025933 | 0.159815 | -0.092534 | -0.004115 | 0.172607 | -0.001668 | 0.069228 | 0.277381 | 0.309209 | -0.06068 | 0.003474 | 0.227043 | 0.23664 | 0.142877 | 0.098583 | 0.112356 | -0.117157 | -0.360571 | -0.088168 | 0.208825 | -0.145487 | -0.024678 | -0.183413 | -0.099192 | 0.18042 | 0.063162 | 0.096484 | -0.058556 | 0.037731 | -0.145398 | -0.168602 | 0.064702 | -0.196291 | -0.000364 | 0.154291 | -0.091264 | 0.021589 | 0.064463 | -0.231406 | -0.058057 | -0.122574 | 0.057404 | -0.148307 | -0.236684 | -0.13207 | 0.193266 | 0.112877 | 0.102943 | 0.064288 | 0.221575 | -0.051448 | 0.147452 | 0.028931 | 0.113132 | -0.052596 | -0.160838 | 0.072935 | 0.048142 | -0.184403 | 0.057984 | 0.228117 | 0.190071 | -0.066096 | 0.094208 | 0.261684 | -0.207752 | -0.043877 | -0.073541 | -0.05308 | -0.288605 | 0.024521 | 0.074325 | -0.039946 | 0.033531 | -0.235148 | -0.135603 | -0.123664 | -0.037717 | -0.060435 | 0.049964 | 0.083506 | 0.16388 | -0.099268 | 0.139338 | 0.040877 | 0.021174 | 0.056473 | 0.091956 | 0.23518 | 0.102462 | 0.020074 | -0.099479 | -0.104324 | 0.074074 | -0.101209 | 0.065121 | 0.07596 | 0.112712 | -0.12151 | -0.206243 | 0.088046 | 0.008292 | 0.020383 | 0.107945 | -0.086803 | -0.04797 | -0.171882 | -0.119813 | 0.167598 | -0.188438 | -0.180191 | 0.077597 | 0.181328 | 0.089848 | -0.135225 | 0.025488 | -0.068444 | -0.296979 | 0.296706 | 0.112226 | -0.134563 | 0.011502 | 0.01883 | -0.086407 | 0.181279 | -0.128738 | 0.060113 | -0.245184 | 0.000496 | -0.147545 | 0.018919 | -0.061525 | 0.265986 | -0.012072 | 0.051485 | 0.067363 | 0.01698 | 0.07017 | 0.135813 | 0.02235 | 0.367209 | -0.062306 | -0.114617 | -0.352404 | 0.091294 | -0.297984 | 0.113435 | -0.127112 | 0.337677 | 0.250976 | 0.229276 | -0.045048 | 0.122564 | 0.092198 | 0.158765 | 0.196706 | 0.11619 | -1.089987 | 0.164173 | -0.234843 | -0.109441 | 0.00555 | 0.019263 | 0.025623 | 0.183779 | 0.141898 | -0.03343 | -0.034247 | 0.083453 | 0.199951 | 0.005418 | -0.104065 | 0.097574 | -0.000347 | 0.010027 | -4.576285 | -0.060001 | -0.094859 | -0.069673 | -0.147874 | 0.014252 | -0.136188 | 0.16581 | -0.09329 | -0.021195 | -0.035924 | -0.217871 | 0.055807 | 0.050671 | 0.06629 | -0.10411 | -0.306424 | 0.064223 | 0.158513 | -0.008004 | 0.125435 | 0.196371 | -0.014123 | 0.1413 | -0.158386 | 0.083155 | 0.033623 | 0.049597 | -0.025144 | 0.329384 | -0.172038 | -0.077875 | 0.057252 | -0.095322 | 0.073585 | -0.111343 | 0.113848 | 0.060845 | 0.059412 | 0.065689 | -0.071104 |
# Task: Process Ebola Virus Protein Sequence Data
## Context
The following dataset contains amino acid sequences for seven key proteins from various Ebola virus genomes, including strains like Zaire and Tai Forest. Each entry provides the protein identifier, name, strain information, and the full sequence. This data i... | ### Processed Ebola Virus Protein Sequence Data
The following entry has been parsed from the provided raw data block. The sequence corresponds to the VP35 interferon inhibitor from a *Zaire ebolavirus* strain. Note that the sequence contains non-standard amino acid characters ('X'), which may require specific handling... | A0A3S7SQW5 | A0A3S7SQW5_9MONO | VP35 | 340 | Zaire ebolavirus | MTTRTKGRXXTVATTQNDRMPGPELSGWISEQLMTGRIPVNDIFCDIENNPGLCYASQMQQTKPNPKMRNSQTQTDPICNHSFEEVVQTLASLATVVQQQTIASESLEQRITSLENGLKPVYDMAKTISSLNRVCAEMVAKYDLLVMTTGRATATAAATEAYWAEHGQPPPGPSLYEESAIRGKIESRDETVPQSVREAFNNLDSTTSLTEENFGKPDISAKDLRNIMYDHLPGFGTAFHQLVQVICKLGKDSNSLDIIHAEFQASLAEGDSPQCALIQITKRVPIFQDAAPPVIHIRSRGDIPRACQKSLRPVPPSPKI... | VP35 | -0.00733 | -0.150961 | -0.011379 | 0.153109 | -0.136104 | 0.107333 | -0.002254 | 0.101721 | 0.0222 | 0.033498 | 0.068619 | 0.008095 | -0.025592 | 0.155274 | -0.020536 | 0.207072 | 0.129167 | 0.003955 | 0.103245 | 0.057415 | 0.049818 | 0.195269 | -0.058688 | 0.195767 | -0.129391 | 0.181867 | 0.172407 | 0.269295 | 0.081506 | 0.149271 | -0.11087 | -0.087212 | -0.192759 | -0.066725 | 0.125692 | 0.225326 | 0.134147 | -0.023183 | -0.137608 | 0.053856 | 0.135491 | -0.043685 | -0.050627 | 0.000074 | -0.083442 | -0.222882 | 0.029198 | 0.099878 | -0.119303 | 0.027501 | 0.072335 | 0.024003 | 0.060755 | -0.053904 | 0.181711 | -0.035133 | 0.123032 | -0.115393 | 0.131183 | -0.151971 | -0.176435 | -0.127565 | -0.105908 | -0.020567 | 0.1059 | 0.082834 | -0.03425 | 0.153716 | 0.109417 | 0.068681 | -0.081033 | 0.149106 | -0.075257 | 0.012259 | -0.07168 | 0.015515 | -0.167134 | -0.124132 | -0.014669 | -0.09373 | 0.098022 | -0.057482 | 0.063291 | 0.013185 | 0.034892 | 0.107909 | 0.096849 | -0.04501 | -0.046578 | -0.149117 | 0.046873 | 0.315091 | -0.219583 | 0.018482 | -0.05664 | 0.027347 | -0.060177 | -0.272524 | 0.234319 | -0.004506 | -0.132269 | 0.0011 | 0.009031 | 0.096051 | 0.322637 | 0.055967 | 0.184811 | 0.08502 | -0.222631 | 0.103704 | 0.21785 | 0.314458 | 0.04048 | 0.142686 | -0.074421 | 0.00242 | 0.049688 | -0.033816 | -0.037334 | 0.029976 | -0.089698 | -0.076699 | 0.008627 | 0.042934 | 0.101904 | -0.040282 | -0.090401 | -0.153122 | -0.00759 | 0.096021 | 0.025661 | -0.089837 | -0.14715 | -0.123208 | 0.026072 | -0.003672 | -0.241821 | -0.017273 | 0.1972 | -0.077329 | -0.078893 | 0.016301 | -0.061021 | 0.030995 | -0.058881 | -0.027055 | 0.055144 | -0.069607 | 0.111759 | 0.110053 | -0.128344 | 0.136275 | -0.033022 | -0.045658 | 0.055106 | -0.053781 | -0.159984 | 0.061166 | -0.092407 | -0.191668 | -0.043541 | -0.001528 | 0.067651 | 0.078671 | 0.013701 | 0.042021 | -0.015766 | 0.080437 | 0.092631 | -0.090462 | 0.005421 | -0.068284 | -0.101144 | -0.017409 | 0.053543 | 0.034022 | -0.117536 | 0.097749 | 0.116048 | 0.020506 | 0.035566 | -0.04429 | -0.210273 | -0.034398 | 0.04428 | 0.157142 | -0.066598 | -0.257807 | 0.027471 | -0.055335 | -0.100465 | -0.000095 | 0.036398 | 0.017779 | 0.042139 | -0.000754 | -0.036966 | 0.117312 | 0.03272 | -0.046202 | -0.126248 | 0.013922 | -0.153089 | -0.078047 | 0.212829 | -0.007637 | 0.101101 | 0.181414 | -0.044794 | -0.045147 | 0.050589 | 0.037488 | 0.159335 | -0.039007 | -0.079113 | 0.117509 | -0.056857 | -0.070219 | 0.002121 | -0.123021 | -0.095731 | -0.116245 | 0.09861 | -0.026278 | -0.113733 | -0.060329 | -0.219516 | 0.070079 | 0.063675 | 0.044644 | -0.106333 | -0.084564 | -0.046553 | -0.009172 | -0.192699 | -0.010307 | 0.001793 | -0.018102 | 0.141681 | 0.16134 | 0.078532 | -0.01931 | -0.053478 | 0.124351 | -0.093588 | -0.054679 | -0.011798 | -0.099498 | 0.270368 | -0.182109 | 0.083994 | -0.031819 | 0.349598 | 0.072796 | 0.010419 | 0.073378 | 0.080108 | 0.194835 | -0.048916 | -0.029512 | 0.109308 | -0.976457 | 0.089485 | -0.185386 | -0.09393 | -0.055138 | -0.06922 | 0.254711 | 0.0267 | 0.087639 | 0.122014 | -0.163585 | 0.160908 | 0.043603 | 0.237307 | 0.137326 | -0.013018 | -0.071153 | 0.145475 | -5.012828 | -0.167189 | -0.024781 | -0.022388 | -0.014761 | 0.270235 | -0.039176 | 0.033352 | -0.035436 | -0.15129 | -0.007369 | 0.018063 | 0.136755 | -0.124814 | 0.019266 | 0.092801 | 0.160848 | -0.185372 | 0.032932 | 0.04134 | 0.083651 | 0.023639 | -0.015332 | -0.033344 | -0.010868 | -0.070008 | 0.183734 | 0.101463 | -0.011145 | 0.003405 | -0.159555 | -0.032565 | -0.008257 | 0.026835 | 0.049588 | -0.083883 | 0.102058 | -0.012192 | 0.106455 | 0.102442 | -0.074211 |
# Task: Process Ebola Virus Protein Dataset for Embedding Generation
## Context
The following dataset contains amino acid sequences for seven key proteins from various Ebola virus genomes, including strains like Zaire and Tai Forest. Each entry provides the protein identifier, name, strain information, and the full se... | ### Processed Ebola Virus Protein Dataset for Embedding Generation
The following structured entry corresponds to the provided raw data block. The sequence integrity has been preserved exactly, including the poly-alanine/unknown residue stretch (`XXXXXXX`), which may represent a low-complexity region, sequencing gap, o... | A0A7S6GAL3 | A0A7S6GAL3_9MONO | GP | 676 | Zaire ebolavirus | MGATGILQLPRDRFKRTSFFLWVIILFQRTFSIPLGVIHNSTLQVSDVDKLVCRDKLSSTNQLRSVGLNLEGNGVATDVPSATKRWGFRSGVPPKVVNYEXXXXXXXCYNLEIKKPDGSECLPAAPDGIRGFPRCRYVHKVSGTGPCAGDFAFHKEGAFFLYDRLASTVIYRGTTFAEGVVAFLILPQAKKDFFSSHPLREPVNATEDPSSGYYSTTIRYQATGFGTNETEYLFEVDNLTYVQLESRFTPQFLLQLNETIYTSGKRSNTTGKLIWKVNPEIDTTIGEWAFWETKKNLTRKIRSEELSFTAVSNGAKNISG... | GP | -0.000894 | -0.110508 | 0.172492 | 0.230568 | 0.006301 | -0.029508 | 0.0374 | -0.137571 | 0.003892 | 0.001435 | 0.080821 | -0.116331 | -0.089185 | 0.185933 | 0.014803 | 0.119482 | 0.219153 | 0.040064 | 0.084099 | 0.089518 | 0.10516 | 0.286288 | -0.221067 | 0.154861 | 0.007732 | 0.035918 | 0.099139 | 0.181428 | 0.17147 | 0.113424 | -0.0457 | -0.004973 | -0.150396 | -0.112336 | 0.139494 | 0.19313 | 0.034504 | -0.27214 | -0.072933 | 0.109995 | 0.244838 | 0.008558 | -0.152692 | 0.079974 | -0.053213 | -0.202598 | 0.154779 | 0.129172 | -0.1874 | 0.075703 | -0.014744 | -0.017794 | -0.061716 | 0.003107 | 0.025224 | -0.185211 | 0.085329 | -0.227655 | -0.165951 | -0.071276 | -0.074211 | -0.295014 | -0.16925 | 0.17658 | 0.124516 | 0.042898 | -0.03002 | 0.148729 | 0.095592 | -0.105336 | -0.016525 | 0.105958 | 0.03993 | 0.111539 | -0.136473 | 0.050852 | -0.079262 | -0.138803 | 0.05032 | -0.042809 | -0.027089 | 0.059987 | 0.059991 | -0.137769 | -0.031915 | 0.160013 | 0.137858 | -0.082829 | -0.043878 | -0.184804 | -0.080007 | 0.281306 | -0.304078 | 0.021777 | 0.036712 | -0.02527 | 0.025437 | -0.285664 | 0.174543 | 0.047265 | -0.107723 | 0.127547 | -0.12526 | 0.128173 | 0.173893 | 0.099976 | 0.044014 | 0.152535 | -0.135298 | 0.060213 | 0.103829 | 0.179983 | 0.022637 | -0.02666 | -0.141724 | 0.172569 | 0.095357 | 0.088878 | -0.005469 | 0.02698 | -0.051342 | -0.042214 | 0.040845 | 0.005648 | 0.058951 | -0.014057 | -0.105335 | -0.162717 | -0.044639 | 0.001707 | 0.115644 | -0.007274 | -0.000365 | -0.09681 | -0.026262 | 0.0434 | -0.334019 | -0.001686 | 0.15481 | 0.130252 | 0.019879 | -0.012536 | -0.18561 | 0.086171 | -0.015741 | 0.031873 | 0.009586 | -0.06485 | -0.091455 | 0.138919 | 0.020955 | 0.16523 | 0.113965 | 0.036663 | 0.003078 | 0.125741 | 0.101452 | 0.129455 | -0.152155 | -0.055721 | 0.146446 | -0.054814 | 0.011641 | 0.122878 | 0.11942 | 0.104226 | -0.070677 | 0.040896 | 0.159612 | -0.0915 | -0.041002 | -0.053328 | -0.051589 | 0.003783 | 0.135655 | -0.060371 | 0.094279 | 0.032068 | 0.053995 | 0.03796 | -0.059956 | 0.054604 | -0.101593 | 0.023704 | 0.138808 | 0.132277 | -0.140774 | -0.039564 | 0.068824 | -0.029726 | -0.094553 | 0.079363 | 0.132459 | -0.01642 | 0.009139 | -0.148975 | -0.001301 | -0.02094 | -0.084802 | -0.020873 | -0.040606 | 0.111404 | 0.012912 | -0.19371 | 0.221255 | -0.043203 | 0.198663 | 0.208562 | -0.036981 | 0.004413 | -0.056733 | 0.08155 | 0.135196 | -0.146615 | -0.057394 | 0.070898 | 0.118033 | -0.034634 | -0.188259 | -0.269956 | 0.029731 | -0.207341 | 0.20067 | 0.059361 | -0.112644 | -0.063759 | -0.03289 | -0.048954 | 0.175912 | 0.008705 | -0.081093 | -0.101291 | 0.065115 | -0.128185 | -0.092502 | -0.02926 | 0.162875 | 0.085146 | 0.101392 | 0.03255 | -0.001072 | -0.084354 | -0.063304 | 0.079563 | -0.066849 | -0.023249 | 0.095687 | -0.100103 | 0.119075 | -0.104989 | 0.054442 | -0.05944 | 0.169479 | 0.090552 | 0.13582 | -0.064067 | 0.07467 | 0.103654 | 0.14835 | -0.055467 | 0.014254 | -1.127537 | 0.149524 | -0.104016 | -0.211996 | -0.09495 | -0.060047 | 0.117475 | 0.005184 | 0.036749 | 0.015877 | -0.206331 | 0.113453 | 0.107134 | 0.153804 | -0.126833 | 0.058496 | -0.065224 | -0.059369 | -5.012476 | -0.145587 | 0.00114 | 0.149335 | 0.103774 | 0.204083 | -0.06632 | 0.149573 | -0.032127 | -0.210056 | 0.007563 | -0.079411 | 0.056698 | -0.050144 | -0.075883 | 0.032789 | 0.019661 | -0.098316 | -0.004552 | 0.129917 | 0.123016 | 0.106679 | 0.06997 | 0.094389 | -0.177501 | 0.023079 | 0.145886 | 0.003576 | -0.1382 | 0.235039 | -0.172603 | -0.175456 | 0.099255 | 0.013665 | 0.086683 | -0.171389 | 0.087384 | -0.041646 | 0.082489 | 0.021284 | 0.005438 |
# Task: Process Ebola Virus Protein Sequence Data
## Context
The following dataset contains amino acid sequences for seven key proteins from various Ebola virus genomes, including strains like Zaire and Tai Forest. Each entry provides the protein identifier, name, strain information, and the full sequence. This data i... | ### Ebola Virus Protein Sequence Data Summary
**Accession ID:** A0A7S6GGM1
**Unique Identifier:** A0A7S6GGM1_9MONO
**Protein Name:** NP (Nucleoprotein)
**Virus Strain:** Zaire ebolavirus
**Sequence Length:** 739 residues
**Sequence Content:**
```text
MDSRPQKVWMTPNLTESDMDYHKILTAGLSVQQGIVRQRVIPVYQVNNLEEICQL... | A0A7S6GGM1 | A0A7S6GGM1_9MONO | NP | 739 | Zaire ebolavirus | MDSRPQKVWMTPNLTESDMDYHKILTAGLSVQQGIVRQRVIPVYQVNNLEEICQLIIQAFEAGVDFQESADSFLLMLCLHHAYQGDYKLFLESGAVKYLEGHGFRFEVKKRDGVKRLEELLPAVSSGKNIKRTLAAMPEEETTEANAGQFLSFASLFLPKLVVGEKACLEKVQRQIQVHAEQGLIQYPTAWQSVGHMMVIFRLMRTNFLIKFLLIHQGMHMVAGHDANDAVISNSVAQARFSGLLIVKTVLDHILQKTERGVRLHPLARTAKVKNEVNSFKAALSSLAKHGEYAPFARLLNLSGVNNLEHGLFPQLSAIA... | NP | -0.030053 | -0.061089 | 0.053277 | 0.166417 | 0.014277 | -0.01024 | -0.008132 | -0.107289 | -0.021644 | -0.046182 | 0.010895 | -0.164005 | -0.136062 | 0.10878 | 0.044838 | 0.125859 | 0.094046 | -0.088081 | -0.004821 | 0.220855 | -0.057821 | 0.425302 | -0.070539 | 0.153478 | -0.143695 | 0.137105 | 0.170771 | 0.249141 | 0.032114 | 0.233291 | -0.129065 | -0.044963 | -0.209551 | -0.089267 | -0.046585 | 0.200121 | 0.130877 | -0.036476 | -0.184203 | 0.054879 | 0.225226 | -0.140313 | -0.080422 | -0.11046 | -0.026498 | -0.129513 | -0.036431 | 0.053525 | -0.087009 | 0.09904 | 0.047775 | -0.002176 | 0.010461 | -0.002864 | 0.120271 | -0.097343 | 0.170809 | -0.199447 | 0.032445 | -0.130143 | -0.248276 | -0.135725 | -0.178423 | 0.01343 | 0.112188 | 0.039286 | -0.065464 | -0.001784 | 0.137645 | -0.002794 | -0.070642 | -0.098269 | -0.049589 | 0.10071 | -0.168383 | 0.059733 | -0.052675 | -0.072647 | 0.067096 | -0.08561 | 0.015705 | 0.084427 | 0.04984 | 0.075129 | 0.108084 | 0.148555 | 0.129882 | 0.066406 | 0.008947 | -0.17541 | -0.069123 | 0.187234 | -0.176437 | 0.067942 | 0.058266 | -0.073055 | -0.049113 | -0.161306 | 0.116153 | -0.053146 | -0.065736 | 0.166829 | -0.052783 | 0.044227 | 0.246846 | 0.014134 | 0.04066 | 0.041658 | -0.222752 | 0.070956 | 0.080511 | 0.227109 | 0.068331 | -0.034064 | -0.081861 | 0.201483 | 0.116982 | 0.024413 | -0.014384 | 0.016531 | -0.125858 | -0.155537 | 0.004245 | 0.033856 | 0.081003 | 0.058645 | -0.188339 | -0.015154 | -0.013939 | -0.059924 | 0.038062 | 0.073684 | -0.085453 | -0.010497 | -0.046269 | -0.029031 | -0.188973 | 0.088559 | 0.101276 | 0.05169 | 0.048803 | -0.017096 | -0.155554 | -0.029321 | -0.103635 | 0.030447 | -0.030784 | -0.002352 | 0.100938 | 0.145613 | -0.108353 | 0.000338 | -0.016097 | 0.208562 | 0.011955 | 0.028795 | 0.044594 | -0.039676 | 0.02757 | -0.135684 | -0.027654 | 0.059856 | 0.065099 | 0.121934 | 0.125348 | 0.133025 | -0.051043 | -0.03491 | 0.172228 | -0.134284 | -0.098124 | -0.038618 | -0.009767 | 0.004173 | 0.15343 | 0.044424 | 0.021219 | 0.158448 | -0.013844 | 0.048146 | 0.060024 | -0.022218 | -0.093212 | -0.107527 | 0.094729 | 0.128077 | 0.051072 | -0.096142 | 0.050113 | 0.022378 | -0.012791 | 0.090318 | 0.115232 | -0.022601 | 0.026307 | 0.049276 | -0.076748 | 0.086154 | 0.069693 | 0.017933 | -0.146702 | 0.114177 | -0.025922 | -0.129834 | 0.212625 | -0.044994 | 0.31535 | 0.117638 | -0.073969 | 0.010826 | 0.005941 | -0.043188 | 0.1456 | -0.101128 | -0.027388 | 0.088348 | 0.003758 | -0.029995 | -0.08494 | -0.195711 | 0.187822 | -0.260105 | 0.15364 | 0.026215 | -0.039114 | -0.097572 | -0.140299 | -0.008751 | 0.052469 | 0.004444 | 0.047099 | -0.130651 | -0.048727 | -0.000993 | -0.104819 | 0.034233 | 0.0124 | -0.023656 | -0.015464 | 0.170406 | 0.081551 | -0.008299 | -0.008907 | 0.19909 | -0.119836 | -0.09575 | 0.062113 | -0.038412 | 0.192677 | -0.140473 | 0.122542 | -0.052808 | 0.050544 | 0.081073 | 0.142585 | 0.024681 | 0.112066 | -0.020446 | 0.01599 | 0.094258 | 0.102039 | -1.177619 | 0.043112 | -0.123469 | -0.117295 | -0.015748 | -0.013277 | 0.068917 | 0.047906 | 0.20626 | -0.051468 | -0.098427 | 0.196747 | 0.008732 | 0.290773 | -0.103825 | 0.080201 | -0.092585 | -0.015098 | -5.035434 | -0.077188 | -0.074571 | 0.041445 | 0.187576 | 0.138231 | -0.050469 | 0.10976 | 0.010528 | -0.142563 | 0.03746 | -0.092344 | 0.175793 | -0.111252 | 0.09242 | 0.056207 | 0.017826 | -0.024232 | 0.087073 | 0.03493 | -0.026375 | 0.148977 | 0.024971 | -0.043956 | -0.14614 | -0.135391 | 0.024256 | -0.103553 | -0.030344 | 0.071792 | -0.145469 | -0.115656 | 0.03432 | 0.041655 | 0.05011 | -0.09863 | 0.110613 | 0.018667 | -0.03161 | 0.103043 | -0.089701 |
# Task: Process Ebola Virus Protein Sequence Data
## Context
The following dataset contains amino acid sequences for seven key proteins from various Ebola virus genomes, including strains like Zaire and Tai Forest. Each entry provides the protein identifier, name, strain information, and the full sequence. These seque... | ### 1. Sequence Metadata Identification
Based on the provided raw data entry, the following metadata parameters are confirmed:
* **Protein Identifier (UniProtKB):** A0A7S6KCK0
* **Unique Entry Name:** A0A7S6KCK0_9MONO
* **Protein Type:** L protein (RNA-dependent RNA polymerase)
* **Strain/Taxonomy:** *Zaire e... | A0A7S6KCK0 | A0A7S6KCK0_9MONO | L | 2,188 | Zaire ebolavirus | MATQHTQYPDARLSSPIVLDQCDLVTRACGLYSSYSLNPQLRNCKLPKHIYRLKYDVIVTKFLSDVPVATLPIDFIVPILLKALSGNGFCPVEPRCQQFLDEIIKYTMQDALFLKYYLKNVGAQEDCVDDHFHEKILSSIQGNEFLHQMFFWYDLAILTRRGRLNRGNSRSTWFVHDDLIDILGYGDYVFWKIPISMLPLNTQGIPHAAMDWYQASVFKEAVQGHTHIVSVSNADVLIMCKDLITCRFNTTLISKIAEIEDPVCSDYPNFKIVSMLYQSGDYLLSILGSDGYKIIKFLEPLCLAKIQLCSKYTERKGRFL... | L | 0.017208 | -0.111645 | 0.154107 | 0.100692 | 0.054231 | -0.071671 | 0.060822 | 0.058492 | 0.136749 | -0.019781 | -0.029512 | -0.048559 | -0.061647 | 0.177769 | -0.041704 | 0.095948 | 0.068864 | -0.012821 | 0.111817 | 0.159532 | -0.004025 | 0.269155 | -0.152645 | 0.110507 | 0.019216 | 0.113543 | 0.093489 | 0.282142 | -0.017316 | 0.182375 | 0.001141 | 0.074975 | -0.158633 | -0.139144 | -0.084198 | 0.187087 | 0.13348 | -0.127878 | -0.016315 | 0.108775 | 0.24884 | -0.167957 | -0.139408 | 0.025588 | -0.141697 | -0.242043 | 0.1373 | 0.169251 | -0.223142 | 0.13145 | -0.004195 | -0.017103 | -0.056811 | 0.024747 | 0.146184 | -0.242161 | 0.211628 | -0.144647 | 0.003706 | -0.031989 | -0.236061 | -0.173764 | -0.055168 | 0.043357 | 0.128051 | -0.036255 | -0.062721 | 0.048723 | 0.16508 | -0.060351 | -0.074878 | -0.111986 | 0.10764 | -0.082358 | -0.209765 | 0.138065 | -0.140187 | 0.042372 | 0.0579 | 0.042483 | 0.085802 | 0.028612 | 0.044587 | -0.010497 | 0.105889 | 0.078522 | 0.145448 | -0.017195 | -0.050811 | -0.142169 | -0.044998 | 0.26162 | -0.332786 | 0.007193 | 0.03004 | -0.096998 | 0.00512 | -0.270172 | 0.142247 | -0.039406 | -0.086797 | 0.197984 | -0.015043 | 0.076178 | 0.394057 | 0.112141 | -0.002983 | 0.137269 | -0.218409 | 0.112568 | 0.158098 | 0.224003 | 0.030191 | -0.037345 | -0.058062 | 0.172862 | 0.177344 | 0.048677 | -0.005589 | 0.128019 | -0.106877 | -0.269922 | 0.042967 | 0.200139 | 0.137454 | 0.0636 | -0.146413 | -0.104753 | -0.018978 | -0.069568 | 0.139749 | 0.019916 | 0.028976 | -0.029932 | -0.100885 | 0.011515 | -0.264373 | -0.033313 | 0.145475 | 0.009339 | 0.048425 | 0.002663 | -0.171064 | -0.026505 | -0.071202 | 0.143601 | -0.034607 | 0.007812 | 0.069174 | 0.080877 | -0.125922 | 0.147807 | 0.065522 | 0.160501 | -0.001714 | 0.047051 | 0.16416 | 0.012434 | -0.125573 | -0.180597 | 0.027787 | -0.054994 | -0.035829 | 0.077141 | 0.22462 | 0.056786 | 0.03802 | 0.0014 | 0.233869 | -0.064895 | -0.115942 | -0.129279 | -0.113114 | -0.084232 | 0.07269 | 0.075052 | 0.052713 | 0.263862 | 0.093357 | -0.062325 | 0.032651 | -0.087783 | -0.055741 | -0.113542 | -0.012877 | 0.186603 | -0.003342 | -0.153463 | 0.160605 | -0.014267 | 0.009684 | 0.001561 | 0.010952 | -0.047271 | 0.074205 | -0.041104 | -0.019043 | 0.055395 | -0.029446 | 0.103433 | -0.051111 | 0.10028 | -0.023361 | 0.033447 | 0.334884 | -0.011789 | 0.191639 | 0.200934 | -0.116665 | -0.05375 | 0.059785 | 0.036572 | 0.18441 | -0.091587 | -0.040071 | 0.120425 | 0.052202 | -0.073543 | -0.084277 | -0.212909 | 0.004588 | -0.217526 | 0.100178 | 0.066112 | -0.095894 | -0.02379 | -0.18687 | -0.09076 | 0.097363 | -0.075597 | -0.047554 | -0.111351 | -0.094337 | -0.078898 | -0.096083 | 0.121225 | 0.088782 | -0.055139 | 0.029027 | 0.083565 | 0.072691 | -0.000359 | -0.097836 | 0.079881 | 0.004026 | 0.094876 | 0.126703 | -0.143366 | 0.125423 | -0.21051 | 0.063438 | -0.106377 | 0.156309 | 0.146801 | 0.066508 | -0.041169 | 0.084708 | 0.044843 | 0.043367 | -0.011699 | 0.136018 | -1.295189 | 0.111281 | -0.159259 | -0.11767 | -0.104701 | -0.014565 | 0.083369 | -0.019823 | 0.122285 | -0.097238 | -0.147363 | 0.192308 | 0.038545 | 0.210767 | -0.108119 | -0.002852 | -0.003905 | 0.006624 | -5.125276 | -0.159364 | -0.034723 | 0.058271 | 0.115849 | 0.086577 | -0.173588 | 0.129197 | -0.128124 | -0.272405 | 0.119761 | -0.016312 | 0.192825 | -0.135796 | -0.002017 | 0.092115 | 0.068681 | -0.043469 | -0.036349 | -0.085613 | 0.027022 | 0.132065 | -0.004522 | -0.030488 | -0.079621 | -0.074984 | 0.009783 | -0.03104 | -0.025782 | 0.027534 | -0.13778 | -0.126649 | -0.060091 | 0.026328 | 0.125823 | -0.092826 | 0.190714 | 0.039452 | -0.002003 | 0.02577 | -0.120634 |
You are an expert bioinformatics assistant specializing in viral genomics and protein sequence analysis. Your task is to process the provided dataset of amino acid sequences from Ebola virus genomes.
### Context
The following data contains entries for seven key proteins (including structural and enzymatic proteins suc... | ### Ebola Virus Protein Sequence Parsing Report
**Entry Count:** 1
**Data Integrity Status:** Validated with noted ambiguities suitable for embedding preprocessing.
#### Structured Data Output (JSON Format)
```json
[
{
"metadata": {
"accession_id": "A0A0S0HDJ5",
"uniprot_entry": "A0A0S0HDJ5_9MONO",... | A0A0S0HDJ5 | A0A0S0HDJ5_9MONO | VP24 | 251 | Zaire ebolavirus | MAKATGRYNLISPKKDLEKGVVLSDLCNFLVSQTIQGWKVYWAGIEFDVTHKGMALLHRLKTNDFAPAWSMTRNLFPHLFQNPNSTIESPLWALRVILAAGIQDQLIDQSLIEPLAGALGLISDWLLTTNTNHFNMRTQRVKEQLSLKMLSLIRSNILKFINKLDALHVVNYNGLLSSIEIGTQNHTIIITRTNMGFLVELQEPDKSAMXXXXXXXXXXXXXHESTLKAFTQGSSXRMQSLILEFNSSLAI | VP24 | 0.029242 | -0.133794 | 0.095113 | 0.054307 | 0.001741 | -0.062136 | -0.04859 | 0.145859 | -0.009782 | -0.002917 | -0.115328 | -0.123135 | -0.144977 | 0.217952 | -0.043622 | 0.234691 | 0.008296 | 0.049065 | 0.111398 | 0.208071 | -0.083007 | 0.113104 | -0.154608 | 0.032971 | -0.025599 | -0.008959 | 0.023618 | 0.188324 | -0.140489 | 0.154902 | 0.078674 | 0.067518 | -0.174528 | -0.032517 | 0.000907 | 0.196929 | 0.079477 | -0.171753 | 0.077801 | 0.201486 | 0.238725 | -0.074446 | -0.122914 | -0.057565 | -0.073312 | -0.154116 | -0.045008 | 0.178153 | -0.147074 | 0.038198 | -0.018919 | 0.081088 | -0.034975 | 0.009148 | 0.0915 | -0.131515 | 0.196304 | -0.189073 | -0.002363 | -0.092932 | -0.225455 | -0.174727 | -0.148317 | -0.104433 | 0.090646 | 0.025934 | -0.047786 | 0.174425 | 0.151205 | -0.037403 | 0.029442 | -0.014933 | 0.011293 | 0.021996 | -0.17327 | 0.038219 | -0.110967 | 0.01457 | 0.110847 | 0.010983 | 0.059538 | 0.092902 | 0.023699 | -0.061962 | 0.189704 | 0.132002 | 0.098212 | 0.025233 | -0.052251 | -0.155427 | 0.096221 | 0.219522 | -0.192493 | -0.026925 | 0.034406 | -0.099812 | -0.006161 | -0.209753 | 0.1376 | 0.000216 | -0.059675 | -0.010526 | -0.015509 | 0.100068 | 0.382584 | 0.099445 | 0.005006 | 0.092968 | -0.039657 | 0.039568 | 0.275952 | 0.257462 | 0.192603 | -0.036113 | -0.021942 | 0.103837 | 0.216587 | 0.060567 | 0.056195 | 0.043356 | -0.129627 | -0.391619 | -0.048469 | 0.091288 | 0.090947 | 0.019274 | -0.102608 | -0.101126 | 0.055653 | 0.023094 | 0.080324 | 0.025522 | -0.049686 | -0.127652 | -0.074269 | 0.062681 | -0.153176 | -0.006644 | 0.191538 | -0.100494 | -0.01509 | 0.012763 | -0.16781 | 0.035426 | -0.095953 | 0.147219 | -0.064335 | -0.001128 | -0.099576 | 0.170969 | -0.085818 | 0.080708 | 0.000366 | 0.126076 | -0.066744 | 0.065386 | 0.000381 | 0.134078 | -0.055096 | -0.190878 | -0.027436 | 0.112885 | -0.076049 | 0.078455 | 0.243269 | 0.122964 | -0.029754 | 0.107041 | 0.20468 | 0.032517 | -0.117191 | -0.028966 | -0.047121 | -0.016875 | 0.088872 | 0.020388 | -0.029744 | 0.19652 | -0.075435 | -0.069511 | -0.009789 | -0.035469 | -0.107722 | -0.116845 | 0.01414 | 0.080143 | 0.079379 | -0.274996 | 0.010504 | -0.018477 | 0.000883 | -0.067239 | 0.090689 | 0.04165 | 0.104099 | -0.040004 | -0.129133 | 0.050293 | -0.003657 | 0.109181 | -0.007542 | 0.085762 | -0.059111 | -0.083057 | 0.098419 | -0.016905 | 0.058292 | 0.144255 | -0.065472 | -0.140508 | 0.042639 | -0.040956 | 0.103312 | -0.089897 | 0.027676 | 0.147416 | 0.035751 | 0.00509 | -0.077907 | -0.090542 | 0.039172 | -0.135112 | 0.119129 | -0.065717 | -0.08535 | 0.031851 | -0.203877 | -0.030416 | 0.031823 | -0.037064 | 0.071032 | -0.150023 | 0.047457 | -0.065492 | -0.050868 | -0.052137 | 0.131089 | -0.027233 | 0.087919 | 0.07486 | 0.129714 | 0.075061 | -0.118952 | 0.099351 | 0.099936 | -0.038225 | -0.027649 | -0.040048 | 0.154698 | -0.287656 | 0.18592 | -0.039222 | 0.274086 | 0.144722 | 0.110159 | -0.010063 | 0.119021 | 0.148844 | 0.08242 | 0.076961 | 0.133072 | -1.159 | 0.188101 | -0.177107 | -0.105485 | -0.093811 | -0.000597 | 0.031404 | 0.030982 | 0.090217 | -0.005576 | -0.123557 | 0.192469 | 0.040058 | 0.058764 | -0.05095 | 0.008024 | -0.063911 | -0.022692 | -5.142575 | -0.05539 | -0.074478 | -0.011067 | 0.028358 | -0.01131 | -0.118076 | 0.077098 | -0.06527 | -0.123181 | -0.017386 | 0.045041 | 0.174404 | -0.002442 | 0.098297 | 0.029398 | 0.039683 | 0.013693 | 0.066814 | -0.01829 | 0.001833 | 0.245914 | 0.071551 | 0.049675 | -0.062215 | -0.121189 | 0.048387 | -0.000924 | 0.016205 | 0.057001 | -0.120299 | -0.093488 | -0.126757 | 0.032735 | 0.087036 | -0.062058 | 0.074656 | -0.061886 | 0.085728 | 0.049108 | -0.082768 |
End of preview. Expand in Data Studio
This dataset is a remastered version prepared using Adaption's Adaptive Data platform.
adaption-ebolavirus_protein_sequences
This dataset contains amino acid sequences for seven key proteins from various Ebola and Marburg virus genomes, including strains like Zaire, Sudan, and Tai Forest. Each entry provides the protein identifier, name, strain information, and the full sequence intended for generating embeddings using models like ESM-2 or ProtT5. The collection includes major structural and enzymatic proteins such as GP, VP40, L, NP, VP35, VP24, and VP30.
Dataset size
There are 8,195 data points in this dataset. This is an instruction tuning dataset.
Quality of Remastered Dataset
The final quality is A, with a relative quality improvement of 213.3%.
Domain
- Science (100%)
Language
- English (100%)
Tone
- Technical (100%)
Evaluation Results
Quality Gains:
Grade Improvement:
Percentile Chart:
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