entry stringlengths 6 10 | entry_name stringlengths 5 11 | protein_name stringlengths 3 2.44k | sequence stringlengths 2 35.2k | function stringlengths 7 11k |
|---|---|---|---|---|
Q9RME6 | EX7S_ZYMMO | Exodeoxyribonuclease 7 small subunit (EC 3.1.11.6) (Exodeoxyribonuclease VII small subunit) (Exonuclease VII small subunit) | MSQEKNISELSFEEALKKLEEIVRRLESGDTTLEDSIQMYSQGDALKKQCEARLKAAQKKIEQISLDQDGRATGTSPFDAE | Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides. {ECO:0000255|HAMAP-Rule:MF_00337}. |
Q9RMM3 | MURI_NEIMC | Glutamate racemase (EC 5.1.1.3) | MENIGRQRPIGVFDSGIGGLTNVRALMERLPMENIIYFGDTARVPYGTKSKATIENFSMQIVDFLLEHDVKAMVIACNTIAAVAGQKIRQKTGNMPVLDVISAGAKAALATTRNNKIGIIATNTTVNSNAYARAIHRNNPDTLVRTQAAPLLVPLVEEGWLEHEVTRLTVCEYLKPLLADGIDTLVLGCTHFPLLKPLIGREAHNVALVDSAITTAEETARVLAQEGLLNTDNNNPDYRFYVSDIPLKFRTIGERFLGRTMEQIEMVSLG | Provides the (R)-glutamate required for cell wall biosynthesis. {ECO:0000255|HAMAP-Rule:MF_00258}. |
Q9RMP7 | 6PGL_XENNA | 6-phosphogluconolactonase (6-P-gluconolactonase) (EC 3.1.1.31) | MKQVVYTASPNSRQIHVWSLNVEGGLSLLQTVDVPGEVQPMVINPDGKHLYVGIRPQFSIVTYAIGKNGSLEQKSIAPLPGSPTHISTDRAGRFLFSASYSFNNLSVHPIDDQGNVKAPIQIVENLQAPHSANIDRENRQLLVPCLKEDHIRIFNMDNQGYLVESHADAITTETGAGPRHMAFHPKKQAIYCINELDSTVDVLRKWEKYRIVQSVDSLPADFSSVRWSADIHMTPDGRHLYTSERSESLISHFRVSEEGYHLTLAGHYLTETQPRGFAIDHSGHFLIASGQKSDHISVSRIDKFSGELTQLARYPVGKSP... | Catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate. {ECO:0000255|HAMAP-Rule:MF_01605}. |
Q9RMT1 | EXBD_PSEAE | Biopolymer transport protein ExbD | MAFSTQDSDEVLSEINVTPLVDVMLVLLVVFIVTAPLLTNSIPINLPKTESVAPPEQKDPLVVSIDGAGKLFVNKDEIQPELLESNLAAAKAKDAEVRVQLQADEGVNYGQVAKAMASIERAGITRLAVITAR | Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates. |
Q9RMX9 | ACPB_BACAN | Capsule synthesis positive regulator AcpB | MEKDIKRQIQILEIITSEEKWFTTIEISKILRCCNKTIMKDISFIKDFLPEDWHIKIKKGKGVRIYLPYNKHRNEITFLLFRESLTFRILQHLFERETKTIATLAERLYIQVPSILPALKRVENYLKKFGLKLRKKPLRLEGDEVRIMIMYLDLYLKSYNDTEWPFEKLKKEVIFQYLGTLEESLGISLHVVSKRHLSFFIAILLKRKQQGYKVQLNRKFLYFNTETPDYVKIGRIFEKLEREFGVSLTVQDKILLTISIKSSKYVYKDINKEKEESVQYFKEGNLSIYELVKDFINSLEEKLKVDLISDEEFIFALVDY... | AcpB and AcpA regulate cap gene expression and capsule synthesis. |
Q9RMZ4 | REPS_BACAN | Replication initiation protein | MNTVQKAIELILHKGLRKYKSKNSKAGLVSIANQEKFESKVLNGKKNKKGSIFITRKKEDLRAKFGTRGVVLSSEEAVLDHVGQASHWTPNVYNFGTYGQNGLRTIVGHTEKNLQQINCFVIDIDSKSFPMTAINDVALNAGFGVPTMILETTKGYQVYYVLDKAVYVSNNKNFIAIKSAKRISQNLREMFADSLPNVDLTCNHFGFFRMPSVQNIVMFFEENVYTFKELQEWSKRQDDNKGNEQFHNVIESPFAKNAPVEQPKQMDELWFKQVISCTNVSPKQTKAGRNNAIFTLSLACFQSQYAIKDTMDLMDQFNSN... | Essential for replication. Binds specifically to a 60-bp region corresponding to the putative origin of replication of pXO2. Binds also nonspecifically to single-stranded DNA with lower affinity. |
Q9RND2 | VIRB6_BARHE | Type IV secretion system protein VirB6 | MSDFSFSPFESISGYILQPLNNVMNTTVSGLSSAISAPLNLASIIFIFLYGYNVMTGRVALSMNSLLNNVVKIVIVTTMATNADTFNTYVKNIFFGDLANAIGNALNSNPSSANVFDYILLKTSARYQEVLAAAWFLEKIMVGLLGSLMIMAVIVFCIGGFIVQMFAQVALVMIIGLGPLFISLYLFNATRKFTDAWITTLVNFTILQVLVIMLGTIMCKIILYVLDGTYESIYFLFPPVVVISIVGAILFRALPGIASALSSGGPYFNAGISSGGQIFTMLSSGAKTGRNAAKSAASTLSGAAGTATKAAKIGGNGRGR... | The type IV secretion system VirB/VirD4 is a major virulence determinant for subversion of human endothelial cell (HEC) function. VirB-dependent changes of HEC include massive cytoskeletal rearrangements, a pro-inflammatory activation by nuclear factor NF-kappa-B, inhibition of early and late events of apoptosis, leadi... |
Q9RNG8 | LVGA_LEGPN | Type 4 adapter protein LvgA (Virulence factor LvgA) | MADGDIEIKAGFVDTDLDDRKLTMIDDLNNPLAIVERVYLIWWHWADFHLHVISPHIDTITPAIVIEPELISGSNDHEFVYSIHDSGSKLSTSKSQDMFSAGMSMCKLFYTIEKMVHILVDRLKSGGVSMEEEVQIAFAGHEIAQRKAFESIINLPYNVVVTNFDPGIWGEKYLQNVKRLADKGYGYPPESPRENYKHPVSSATTARK | Component of the Dot/Icm type IVB secretion system (T4BSS), which is used to inject bacterial effector proteins into eukaryotic host cells (By similarity). Part of a subcomplex which recruits effector proteins and delivers them to the core transmembrane subcomplex (By similarity). Is a critical subunit for binding a su... |
Q9RNL5 | YIDC_ZYMMO | Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC) | MDDKHQQRNLVIVTILSALILFGWSFVTKHWLSTPPAPTQQGKNQPKAELTAEESGDKPLKPVDQVLQETPRLPILTESVEGSVNLKGLRLDDLTLIRHRETLAKNSPAVRLFSPAGTENAWFTSFGWTGENVALPNADSLWKADSDKLTADHPVNFYWNNQQGQIFRITLSVDHDYMFNATESVINRGNSPVIVQPYVLTNHQGVFKTASSWTLHTGPIGVFNGSVNYHVDFADIDKATNNSIRNNTQGGWIGFSDKYWLTALAPHNQKIAIDTDFRSSSNHHYQADFTVAPVVVAAGKTASTSVDVFAGAKEVRVLDR... | Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning memb... |
Q9RNL6 | ENGB_ZYMMO | GTP-binding protein EngB (GTP-binding protein CgpA) | MSPENDIRLEAGRKLFAGAVNFLKSAPALEFLPAPTAPEVAFAGRSNVGKSSLINALTNRNSLARASTTPGRTQELNFFDVGEPLQMRLVDMPGYGFAKAPKDVVKRWKWLINDYLRGRAVLRRSLILIDSRHGIKDVDRDLMKMLDDAAISYRVVLTKSDKIKAVELEKTVKAITEEMRKHPAAFPEIIATSSEKGTGIAELRAAVYDAII | Necessary for normal cell division and for the maintenance of normal septation. {ECO:0000255|HAMAP-Rule:MF_00321}. |
Q9RNU9 | CAPP_STRCO | Phosphoenolpyruvate carboxylase (PEPC) (PEPCase) (EC 4.1.1.31) | MSSADDQTTTTTSSELRADIRRLGDLLGETLVRQEGPELLELVEKVRRLTREDGEAAAELLRGTELETAAKLVRAFSTYFHLANVTEQVHRGRELGAKRAAEGGLLARTADRLKDADPEHLRETVRNLNVRPVFTAHPTEAARRSVLNKLRRIAALLDTPVNESDRRRLDTRLAENIDLVWQTDELRVVRPEPADEARNAIYYLDELHLGAVGDVLEDLTAELERAGVKLPDDTRPLTFGTWIGGDRDGNPNVTPQVTWDVLILQHEHGINDALEMIDELRGFLSNSIRYAGATEELLASLQADLERLPEISPRYKRLNA... | Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle. {ECO:0000255|HAMAP-Rule:MF_00595}. |
Q9RNY0 | RECA_MANHA | Protein RecA (Recombinase A) | MAEKKSQKNTPVKQIDPEQKEKALAAALAQIEKQFGKGSIMKLGDTQALDIEAVSTGSLGLDSALGIGGLPMGRIVEIYGPESSGKTTLTLSVVAQAQKNGKTCAFIDAEHALDPIYARKLGVDTDGLLISQPDNGEQALEICDALVRSGAVDVIIVDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKATNCLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRSGVVKDGDEVIGSETKVKIVKNKVAPPFREVQFDIMYGEGIARMNELLILAESHGFINKAGAWFSYEGEKIGQGKNNAI... | Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage. {ECO:0000255|HAMAP-Ru... |
Q9RNZ5 | IHFA_ZYMMO | Integration host factor subunit alpha (IHF-alpha) | MQADIPTLTRADITDMLYHEVGLSRADSAKMIEQMLGHITDALKKGENVKISGFGSFILRDKNERVGRNPKTGIEVPIAPRRVLTFRASQLMRQRIIKGA | This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. |
Q9RPD4 | MCH_METTR | Methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27) (Methenyl-H4MPT cyclohydrolase) | ICLGGLGKVTLAPAPGQTNWPFWLTVTSNDPVVACLASQYAGWSLSHEKFFALGSGPGRSLARKEPLFQELPYEDSASRATIVLEAGAPPPEPVVAKVAESCGVSPDKLAFIYAPTQSLAGSVQVVGRVLEVALHKAHELKFPLEHIVDGIATAPLSPPHPDFVTAMGRTNDAIIYSGRAHLFVRGSAEAAKALAEKLPSSNSRDYGRPFAEIFKAYKGEFYKIDPSLFSPAEAIVTAVETGETFRAGAIDEKLLDASFG | Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl-H(4)MPT. |
Q9RPF2 | MNTH2_PSEAE | Divalent metal cation transporter MntH 2 | MSAKDTPAPQAAEPGRAQPVEVPGGGHWWRRLLAFAGPGYLVAVGYMDPGNWATDVAGGAQLGYLLLSVILLSSLMAMLLQALSARLGIASGLDLAQACRERYSPSTCRLLWLACETAIIACDLAEVIGTAIALKLLFGLPLAWGALLCVGDALLVLVLIGRGQRPLEAFVVALLTLIFACFAVQLLLSRPELGEVLQGFLPSPRVLSDPAALYLAIGIVGATVMPHNLYLHSSLVQSRAYPRSLAGKRKALRWAVADSSLALTLALLVNAAILIVAASVFHRNGHTEVVDIEQAHALLSPLLGLELASLLFAVALLASG... | H(+)-stimulated, divalent metal cation uptake system. {ECO:0000255|HAMAP-Rule:MF_00221}. |
Q9RPF3 | MNTH1_PSEAE | Divalent metal cation transporter MntH 1 | MKYSLPTTATAPFCPSAVSHSVAVPADASPLRKLALFVGPGLLVSVGYMDPGNWATAIEAGSRFGYALLFVVVLASFSGMLLQSLCSRLGIATGRDLAQLSRERYRPGVARGQWLLAELSIVATDLAEVLGAALAFHLLLGVSITTGVVLTAFDTLIVLALQGANFRRLEAIVLGLIATIGACFFVELVLIGPYWPDVAAGLRPSWDTLSSQEPLYLAIGILGATVMPHNLYLHSSVVQTRVSGDDAASKRSAIRFSRLDTIGSLSLALLVNAAILILAAAAFHGSGHTEVVEIQDAYHLLDPLVGGALASFLFGFALLA... | H(+)-stimulated, divalent metal cation uptake system. {ECO:0000255|HAMAP-Rule:MF_00221}. |
Q9RPK1 | ADC_CLOBE | Acetoacetate decarboxylase (AAD) (ADC) (EC 4.1.1.4) | MLESEVSKQITTPLAAPAFPRGPYRFHNREYLNIIYRTDLDALRKIVPEPLELDGAYVRFEMMAMPDTTGLGSYTECGQAIPVKYNEVKGDYLHMMYLDNEPAIAVGRESSAYPKKFGYPKLFVDSDALVGALKYGALPVVTATMGYKHEPLDLKEAYTQIARPNFMLKIIQGYDGKPRICELICAENTDITIHGAWTGSARLQLFSHALAPLADLPVLEIVSASHILTDLTLGTPKVVHDYLSVK | Catalyzes the conversion of acetoacetate to acetone and carbon dioxide. {ECO:0000255|HAMAP-Rule:MF_00597}. |
Q9RPM6 | SOPE_SALTI | Guanine nucleotide exchange factor SopE (Effector protein SopE) (Toxin SopE) | MTKITLSPQNFRIQKQETTLLKEKSTEKNSLAKSILAVKNHFIELRSKLSERFISHKNTESSATHFHRGSASEGRAVLTNKVVKDFMLQTLNDIDIRGSASKDPAYASQTREAILSAVYSKNKDQCCNLLISKGINIAPFLQEIGEAAKNAGLPGTTKNDVFTPSGAGANPFITPLISSANSKYPRMFINQHQQASFKIYAEKIIMTEVAPLFNECAMPTPQQFQLILENIANKYIQYTP | Activator for both CDC42 and RAC1 by directly engaging these Rho GTPases and acting as potent guanine nucleotide exchange factor (GEF). This activation results in actin cytoskeleton rearrangements and stimulates membrane ruffling, promoting bacterial entry into non-phagocytic cells (By similarity). |
Q9RPW2 | MCH_METRU | Methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27) (Methenyl-H4MPT cyclohydrolase) | SLSHGKYYALGSGPARAMATKVKDGAVEPVEELYKELEYRDSHDKTVLVIENDAVPPVEIVEKVAAACGVSPADLTIIVTPTSSLAGGVQVVGRVLEVAMHKAHALHFPLENIVDGTGSAPVCPPHPNFVKA | Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl-H(4)MPT. |
Q9RPW3 | MCH_METTO | Methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27) (Methenyl-H4MPT cyclohydrolase) | SLSHGEGKNAFYALGSGPARALATKVKDGNEEPVEELYKELGYRDHSNETAIVMEVDKVPPVEVIEKIAKACKVDASGVHVILTPTSSLAGGMQVVGRVLEVALHKAHSLHFPLGNIIDGTGTAPVPPPHPNFVKA | Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl-H(4)MPT. |
Q9RPW4 | MCH_METAL | Methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27) (Methenyl-H4MPT cyclohydrolase) | SLSHEKYYALGSGPARAMAAKIKDGNEEPVEELYKELGYRDSFDSTVLVIENDAVPPPAIVEKVAAACKVDPGKLTVIVTPTSSLAGGLQVVARVLEVAMHKAHALHFPLENIVDGFGSAPLCPPHPNFVKA | Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl-H(4)MPT. |
Q9RPW5 | MCH_METME | Methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27) (Methenyl-H4MPT cyclohydrolase) | SLSHEKFFSLGSGPGRALAGREELYKELGYKDSADAAVLVLESDKVPPQEVVEKVARDTGVKAENLTFILTPTRSLAGTVQIVARVLEVALHKIHTLHFPLEHVVDGMASAPLPPPAPDFLIGMGRTNDAILFGGHAHIFVKGSDEAAAKLAKELPSSASRDYGRPFAEVFKAVNM | Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl-H(4)MPT. |
Q9RPW6 | MCH_HYPME | Methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27) (Methenyl-H4MPT cyclohydrolase) | TITEETTGFFALGSGPARALSRVEDLFKELNYADQGPNTALVIEGDKAPPAAVIENIAKHCGINPKGLSILYATTWSLAGTVQIAARVLEVAMHKAHALHFALENIIDGTATTPIAPPFPDFVKAMGRTNDAIIYGGRAHLFVKGTDAEAKRLAEGLPSSTCASFGKPFAEIFADVNG | Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl-H(4)MPT. |
Q9RPW7 | MCH_METOR | Methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27) (Methenyl-H4MPT cyclohydrolase) | MSASQSYPSINALSGPLVERLVADAPTLRLSVSQAAGGARMVDAGAQARGSIEAGRRIAEICLGGLGTVTIAPSGPIASWPYSVTVHSADPVLACLGSQYAGWSLADETGDSGFFALGSGPGRAVAAVEDLYQELGFRDSATKTALVLEAAGGPPESVVAKVAEASGLKPEDLTFIYAPTQSLAGSTQVVARVLEVALHKAHTVGFDLHAIVDGIGSAPLSPPHPDFIKAMGRTNDAIIYGGRVQLFVDADDADAKQLAEQLPSTTSSDHGAPFAEIFARVNGDFYKIDGALFSPAEAIVTSVRSGATYRGGRLEPTLVD... | Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl-H(4)MPT. |
Q9RPW8 | MCH_METCA | Methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27) (Methenyl-H4MPT cyclohydrolase) | MQNRVSVNAHSQPIVKYLITYADKLRLQIDRLPNGCTVIDAGIKVPGSLEAGRLIGEICMGGLGRITLTHTDTFTKWPLTVNVHTSNPVIACLGSQYAGWSLSHGEGKDGFYALGSGPARAMATKIKDGNEEPVEELYKELNYRDKHTETAIVMEVDKVPPVEVTDKIARACKLDPSHLTVILTPTSSLAGGMQVVARVLEVALHKAHALHFPLENIIDGTGCAPVPPPHPNFIKAMGRTNDAILFGGRVHLFVKGSDEAAETLANELPSSVSRDYGKPFAEVFKEYKYDFFKVDAMLFSPASVIVTTVDSGRSFHAGEV... | Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl-H(4)MPT. |
Q9RPX3 | YU58_BRUSU | Type IV secretion system putative outer membrane lipoprotein BRA0058/BS1330_II0058 | MRTLVMVACAVSLAACSSPPKPPTVSGRHRIPINSPAAQEELRLQVFPQEPTAQATMWPARPPKQTVSVYFPQDVTVFRPTSAQINQLHTLLWPVPKHINVRGLTDNNCPPPGDTQVARVRALAIYNWLINQGVSASRITISYAPVKDYASNAPLSPGRVLNRRVDIEILRK | The VirB system could be required for the establishment of the replication niche in the host. |
Q9RPX6 | VIRB9_BRUSU | Type IV secretion system protein virB9 | MKRFLLACILITLASPSWATKIPSGSKYDSRIQYVDYNSGDVVLVRALPGVGARIVFAPGENIEDVASGFTQGWEFKASHNILYLKARSMTLSHSNQSIDMAPEPGKWDTNLMVTTDQRMYDFDLRLMPGRNNQRVAYRVQFRYPAAAAAAAVAAAQKRVVQARMNARPSPVNWNYTMQVGTNSASIAPTLAYDDGRFTYLRFPNNRDFPAAFLVAEDKSESIVNSHIDPSAPDILVLHRVAKQMVLRLGNKVIGIYNESFNPDGVPARDGTTVPGVKRVIKSPGENLQ | The VirB system could be required for the establishment of the replication niche in the host. |
Q9RPX9 | VIRB6_BRUSU | Type IV secretion system protein VirB6 | MVNPVIFEFIGTSIHNQLNNYVTMVASNTMNMIATTAVLAGGLYYTAMGILMSVGRIEGPFSQLVISCIKFMLIAAFALNISTYSEWVIDTVHNMESGFADAFAGNHGTPSSTIYQTLDNSLGKGWNIAAMLFEKGDNRGLTQIVQGFSELLLSFLVAGSTLILAGPTGAMIVATNAVIAILLGIGPLFILALGWAPTRGFFDRWFGAIVTSILQVALLSAVLSISSAIFSRMVAAINLASATQSTLFSCLSLTAVTIVMPYMMYKVYEYGGILGSSISAATISLGSLAVNTATSGGGAMTSIFSGSSGGGGSGSAKAGG... | The VirB system could be required for the establishment of the replication niche in the host. |
Q9RPY0 | VIRB5_BRUSU | Type IV secretion system protein virB5 | MKKIILSFAFALTVTSTAHAQLPVTDAGSIAQNLANHLEQMVKFAQQIEQLKQQFEEQKMQFDALTGYRGLGDILRDPTLRSYLPHNWRDLYEAVMSGGYLAAAGETANLLRKSQVYDPCASISDKDQRIACEAKVVKPVQDKVMTSKAYDATDKRLQEIESLMQEINKTGDPKAIAELQGRIESENAMIQNEDTRLHLYQQMAEAQDKLLDERQHELDAKDNARRGYPQPKALEAAY | The VirB system could be required for the establishment of the replication niche in the host. |
Q9RPY1 | VIRB4_BRUSU | Type IV secretion system protein virB4 | MGAQSKYAQQLNNERSLAPFIPFRSQVGPTTVITRDGDFVRTWRIAGLAFETQDKEELLIRKDQLNTLFRAIASNNVALWSHNVRRRTWDHLKSFFSNPFCDALDKKYYGSFSGYRMMSNELYLTVIYRPVPAKISRLFNVAVHRSHAEILQEQQLAIRKLDEIGNQIETSLRRYGGDDGRGIEVLSTYEDKHGALCSQQLEFYNFLLSGEWQKVRVPSCPLDEYLGTGWVYAGTETIEIRTANATRYARGIDFKDYASHTEPGILNGLMYSDYEYVITQSFSFMTKRDGKEFLTRQKQRLQNTEDGSASQIMEMDIAID... | The VirB system could be required for the establishment of the replication niche in the host. |
Q9RPY4 | VIRB1_BRUSU | Type IV secretion system protein virB1 | MVPFLVLAQQCAPTVAPQTMAAIVQVESGFNPYAIGVVGGRLVRQPVSLDEAITTAQSLEAKGWNFSLGIAQVNRYNLPKYGSTYAQAFDPCKNLKMGSKILEDCYRRAIVKMPGQEQGALRAAFSCYYAGNFTGGFKTKPGSPSYVQKVVASADVTTKPIAVVPMIRKTPDAAAAVAAPVKKRQPADRNSVLVDLHPSSQSMPATGAANAPVRLKTEQPATTDAPPGKDNTDGVVVF | The VirB system could be required for the establishment of the replication niche in the host. |
Q9RQ01 | MCH_XANAU | Methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27) (Methenyl-H4MPT cyclohydrolase) | MTSQATSQATSPALTTPVDAAPQISLATCVAPLVEALIRDADALRLKVSRGPRDALIVDAGITAAGGLEAGRRIAEICLGGLGRVALVPTGRFSPWDTLASVSTSGPVLACLGSQYAGWSLAAGDFFALGSGPGRAIAAVETLYGELGYRDRGEKVVLVLETAVVPPAEVVDEIAARCAVAPSDITLILTPTSSLAGTVQIVARVLEVALHKAHALHFPLEHIADGVGSAPICPPSPDFLTAMGRTNDAVLYGGDVHLFVHGPAEAAKDLATRLPSLASRDYGRPFGEIFAGYDCDFYKVDPLLFSPARVTVTAIDHGES... | Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl-H(4)MPT. |
Q9RQ04 | MCH_METFK | Methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27) (Methenyl-H4MPT cyclohydrolase) | MSESKLDVTLWPSVNQLTNPLVKHLVDNAKALRLLVEKLPSGATIIDAGIKAEGGLEAGRLIAEICMGGLGHVNLHSSSTFPHWPWTLSVHSNNPVLSCLGSQYAGWSLSHEKFFSLGSGPGRALAGREELYKELGYKDSADAAVLVLESDKVPPQEVIEKVARDTGVNPENLTFILTPTRSLAGTVQIVARVLEVALHKIHTLHFPLEHVVDGAASAPLPPPAPDFLIGMGRTNDAILFGGHAHIFVKGSDEAAAKLAKELPSSASRDYGRPFAEVFKAVNMDFYKIDPMLFSPAAVTVTAVESGKSFIGGKLDATLLD... | Catalyzes the hydrolysis of methenyl-H(4)MPT(+) to 5-formyl-H(4)MPT. |
Q9RQ30 | FARA_NEIGO | Fatty acid resistance protein FarA (Efflux pump protein FarA) | MKSGNSEPNLMETHTDETKLQNTQVKRKRRLTALTLLFALSAAAAGSAFFLWWQHEEETEDAYVAGRVVQVTPQKGGTVRKVLHDDTDAVKKGDVLAVLDDDNDVLAYERAKNELVQAVRQNRRQNAATSQAGAQVALRRADLARAQDDLRRRSALAESGAVSAEELAHARTAVSQAQAAVKAALAEESSARAALGGDVSLREQPEVQTAIGRLKDAWLNLRRTQVRAPADGQVAKRSVQVGQQVAAGAPLMAVVPLSDVWVDANFKETQLRHMKIGQPAELVSDLYGKQIVYRGRVAGFSAGTGSAFSLIPAQNATGNW... | Mediates resistance to long-chained antibacterial fatty acids (FAs). Function is dependent on the MtrE outer membrane protein. |
Q9RQ33 | TRPA_BUCMH | Tryptophan synthase alpha chain (EC 4.2.1.20) | MNRYQKLCKKLIPFKKGCFIPFVVLGDPSIDMSLKIINALIENGADGLELGIPFSDPIADGEIIQKANLRAFNSKINLHKCFDILSEIREKHQTIPIGLLLYSNLIFKFGINKFYLKCYKIGIDSILIADLPIEESYVFRKYAVINNILPVFICPPDAKKNVIKNIAIHSQGYIYLLSRSGVTGINQEIMIPPLSLINKLKKLTKTPLIQGFGVSYPYQIQKIILSGISGVICGSIIAKLIENYFQDDDKLIKEIIFLSKSFKKATIIIE | The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. {ECO:0000255|HAMAP-Rule:MF_00131}. |
Q9RQ35 | TRPD_BUCMH | Anthranilate phosphoribosyltransferase (EC 2.4.2.18) | MNNILNRIYNGYNLTEIESYNLFQYIMSGKINNVQLSAILIALKIKGESEQEIMGAMQACLEQAQPFPKQNYMFSDIVGTGGDLSNSINISTASALVGATCGLKIIKHCNSSISGKSGSYDLLKEFDININISQKKSQEMLNKLNVCFLFAPQYHASFKHVSLVRKILKTRTLFNILGPLLNPSNPPLSVIGVYSTKLMIPIAHILKKLNRHRSIIVYSNNIDEVTLHSPTNITELKNSKITSYTLYPESFGVHFHDKNTILGGTPKENYEIVKKVFQGKGPISITETIAANTAILLQLFGNEDLKKNTQYALKIIYSGK... | Catalyzes the transfer of the phosphoribosyl group of 5-phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA). {ECO:0000255|HAMAP-Rule:MF_00211}. |
Q9RQ74 | ATPG_BUCMH | ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit) | MSEIKEVRNKIKCITNTQKITKAMEMVSISKMKKAEVKMNSGRPYLKTIKEIINNFISNNTRYQHVYLEQRAVKKIGIIIISTDRGLCGNLNVTLFKKILDFIQNYNNRNITSDLSILGLKGLSFFKSLSNKIVYFNDYAKNNYTFSDCLNCNSIFMKLYSIGEIDRLFLAYNKFKSTLIQIPSIIQLLPLSKKKIHCHNNHWDYIYESDSKLLLNKLLNNYLEFQIYQASLENYTSEQAARMIAMKQATDNSKDLIRELQIIYNKARQDNITQELTEIVSGAAAISLN | Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. {ECO:0000255|HAMAP-Rule:MF_00815}. |
Q9RQ77 | ATPG_BUCSC | ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit) | MSEKKEIKNKINCISNTKKITKAMEMVSIAKMKKSEIKMKSRKPYLDIIKTIISHILYNHIKYRHLYLNNRKTKKIGIIVISTDRGLCGSLNISLFKKIIQLINIYKNKNVMSSLFILGSKGVSYFKSSTYDITYYEKIITKNYTFFDCLNFIHSSLEYYNTQKIDKLFLSYNQFKNTLVYIPVIMQLLPLSKKIFKGNKNSHWDYIYESNSGILLDTLLNDYIESQIYQSILENCTCEQASRMISMKQATDNSEDLIKKLRILYNKARQDNITQELTEIISGANAVSLY | Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. {ECO:0000255|HAMAP-Rule:MF_00815}. |
Q9RQ80 | ATPG_BUCDN | ATP synthase gamma chain (ATP synthase F1 sector gamma subunit) (F-ATPase gamma subunit) | MASIKEIKTQITSVVNTKKITKAMEMVAISKMRKTEERMSSGRPYSEIIRKVINHVAQGHLEYKHSYLETRKIKRIGLIIVSSDRGLCGSLNSNLFRKVLFKIQNFTQKNIPCDLILFGLKSLPVFKLCENNILSKITHLGEHPNILKVINGIDVLLKKYQIKRIDKIFIAYNEFHNKMSQYPKIIQLLPLSRIKSETISTKRWDYLYESESKLIIDSLFKRYIESQVYQSILENIASEHAARMMAMKTATENSTERIKELKLLYNKVRQATITQELTEIIAGASAVSTG | Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. {ECO:0000255|HAMAP-Rule:MF_00815}. |
Q9RQ82 | HISX_BUCMH | Histidinol dehydrogenase (HDH) (EC 1.1.1.23) | MKNCLKIIHWDRCSIEEREKILSRPILDDLSAIKKQVKTIISDVNSLGDQALYNYTNIFDKIKLNNIKISHQDLVKAELCIDVKAKNAIQVAIDNIRTFHISQNISTLNIEINKGIYCQQIVRPIGSVGLYIPGGSAPLLSTVLMLAIPARIAGCKKIVLCSPPPITNEVLYASKICGVQEIFQVGGAQAIAALGFGTETI | Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine. |
Q9RQ85 | HISX_BUCSC | Histidinol dehydrogenase (HDH) (EC 1.1.1.23) | MHNILEVIYWNKCSYERKKKILSRPIISNRFLIRNKVKEIISNVKSFGDRALYNYTNVFDNINLKNIRVSEEDIVSSHLHVSKELKLAVEVAFKNIKKFHSKQNVGSFNLKVQDNIYCQQIIRPIESIGLYIPNGSAPLLSTVLMLAIPANIAGCKRIMLCSPPPIMNEILYACKICEIKDVFQIGGAQAIAALGCGTETI | Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine. |
Q9RQ88 | HISX_BUCDN | Histidinol dehydrogenase (HDH) (EC 1.1.1.23) | MNYLKNIFYWSKLNYDEQQKILSRPILNRNHTVKDTVKKVIENVKNFGDNALRKYSILFDKFNVNEFRIPEEKIISSFLNINENLKSSILIAKKNITSFHEAQILSTIDIETQIGVRCQQVYLPLNSVGIYIPNGTTSLFSSVLMLAIPAKIAGCKEIILCSPPPINNNILYASYVCGIKKIFQVGGAQAIAALAFGTETI | Catalyzes the sequential NAD-dependent oxidations of L-histidinol to L-histidinaldehyde and then to L-histidine. |
Q9RQJ6 | RSMH_CAUVC | Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH) | MSAAPHISVLLDEVVEALDAKPGDVVVDGTFGAGGYTRAVLPTGASVVAFDRDPTVRQFAANLPADRFRLVQARFSEMLDELGPESVEGVMLDLGVSSMQLDQAERGFSFMRDGPLDMRMGDTGPTAADLVNTLDHAELAKILYVYGEEHASRRIASFILRRREERPFERTLDLAEVIERAVGGRKGAKVHPATRSFQGLRIAVNDELGELEAGLAAAERVLKPGGRLVVVTFHSLEDRIVKAFLAERAGKAPGGSRHAPPVAAGAAPSFQLISNKAIAPSEAELAVNPRARSSKLRAAVRTDAPVWEAAG | Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. {ECO:0000255|HAMAP-Rule:MF_01007}. |
Q9RQJ9 | KTHY_CAUVC | Thymidylate kinase (EC 2.7.4.9) (dTMP kinase) | MTQGFFISFEGGEGAGKSTQIRRLADRLKAAGHDVIVTREPGGSPGAEAIRELLVNGAADRWSPVTESLLMYAARRDHIERVIRPGLARGAVVLCDRFADSTRAYQGAGGDAPASLIAALEEHVLGGTVPVLTLILDLPAEVGLQRAEARGGAARFESKGLAFHERLRAGYLEIARREPDRCVVIDADAELDAVTAAISDVVVQRLGL | Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis. |
Q9RQL3 | PERR_STAAU | Peroxide-responsive repressor PerR | MSVEIESIEHELEESIASLRQAGVRITPQRQAILRYLISSHTHPTADEIYQALSPDFPNISVATIYNNLRVFKDIGIVKELTYGDSSSRFDFNTHNHYHIICEQCGKIVDFQYPQLNEIERLAQHMTDFDVTHHRMEIYGVCKECQDK | Manganese-dependent repressor that controls a regulon of oxidative stress resistance and iron-storage proteins. May act as a hydrogen peroxide and organic hydroperoxide sensor (By similarity). |
Q9RQP6 | ICAC_STAA8 | Probable poly-beta-1,6-N-acetyl-D-glucosamine export protein (PGA export protein) (Poly-beta-1,6-GlcNAc export protein) (Biofilm polysaccharide intercellular adhesin export protein) (Biofilm PIA export protein) (Intercellular adhesion protein C) | MKKIRLELVYLRAIICAIIIITHLLTQITLKHENMEGGSLVLQFYIRNIVIFGTPCFIILSQLLTTLNYQKVTYRYLTTRVKYILIPYILMGLFYSYSESLLTDSSFNKQFIENVLLGQWYGYFIVVIMQFFILSYIIFKINYNLFNSKILLLLSFILQQSFLYYFTNNTAFHDTVLHYYPLSENTIIFGWIFYFFLGAYMGYNYERVLNFLERYLVIMIVLAVATYFVFIALANGDYWNVTSFSYSLTPYNSIMFIVILGICTHFKTMLFNTIQMISAFSFFIYLLHPIILDSLFAYTNIFEDNTMVFLAISLLFILGL... | Presumably involved in the export of the biofilm adhesin polysaccharide poly-beta-1,6-N-acetyl-D-glucosamine (PNAG, also referred to as PIA) across the cell membrane. |
Q9RQP8 | ICAD_STAA8 | Poly-beta-1,6-N-acetyl-D-glucosamine synthesis protein IcaD (PGA synthesis protein IcaD) (Poly-beta-1,6-GlcNAc synthesis protein IcaD) (Biofilm polysaccharide intercellular adhesin synthesis protein IcaD) (Biofilm PIA synthesis protein IcaD) (Intercellular adhesion protein D) | MVKPRQREYPTLKSSLNIVRETALIAISCVFWIYCLVVLLVYIGTIFEIHDESINTIRVALNIENTEILDIFETMGIFAIIIFVFFTISILIQKWQRGRES | Necessary for the synthesis of poly-beta-1,6-N-acetyl-D-glucosamine (PNAG, also referred to as PIA), a biofilm adhesin polysaccharide. Is required for full IcaA N-acetylglucosaminyltransferase activity (By similarity). |
Q9RQQ0 | ICAR_STAA8 | Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR (Intercellular adhesion protein R) | MKDKIIDNAITLFSEKGYDGTTLDDIAKSVNIKKASLYYHFDSKKSIYEQSVKCCFDYLNNIIMMNQNKSNYSIDALYQFLFEFIFDIEERYIRMYVQLSNTPEEFSGNIYGQIQDLNQSLSKEIAKFYDESKIKMTKEDFQNLILLFLESWYLKASFSQKFGAVEESKSQFKDEVYSLLNIFLKK | Represses transcription of the icaADBC operon necessary for biofilm production. |
Q9RQQ1 | CAPA_STAAW | Capsular polysaccharide biosynthesis protein CapA | MKEKFDLVKLLNILKKNIKLLLILPAICLVVSAALTFFVMPDKYTASTQILVNMKKSSSDLAFQNVQSSLQSVNTYTEIIKSPRILDKVSREFDGQYSTAELNSFLKVTNQTNSQIITVSVTTGNKSESDKIVNKISKVFAHDMPKIMSVDNVTILSSAHDNAVKVSPIVSVNLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQKF | Required for the biosynthesis of type 1 capsular polysaccharide. |
Q9RQW2 | ACPS_NEIMA | Holo-[acyl-carrier-protein] synthase (Holo-ACP synthase) (EC 2.7.8.7) (4'-phosphopantetheinyl transferase AcpS) | MIYGIGTDIVSLKRIVRLSKKFGQAFAERILTPEELLEFPQAGKPVNYLAKRFAAKEAFAKAVGTGIRGAVSFRNIGIGHDALGKPEFFYAPALSKWLEEQGISRVSLSMSDEEDTVLAFAVAEK | Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein. {ECO:0000255|HAMAP-Rule:MF_00101}. |
Q9RQZ7 | RPOB_MYCPR | DNA-directed RNA polymerase subunit beta (RNAP subunit beta) (EC 2.7.7.6) (RNA polymerase subunit beta) (Transcriptase subunit beta) | RTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHSSH | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. |
Q9RR90 | ISPD_DEIRA | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT) | MSAPHTSSPRTAALIPAAGSGTRLGLGPKAFVEVAGRSLLARSVAALAPFVDEVVVALPAGMDLPAGVPARAIVGGETRQGSVRRLLEATEAGTVLIHDAARPFVPPPVILALLDAIAATGAATVALPVADTLVRAEGQSWGQLVPREGLWAVQTPQGFRRELLLQAHARAEAEQYAATDDAGLLARLGVQVRLVPGDARLFKVTTPGDLALAEALTGHVDGGWLTVEGEKR | Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). {ECO:0000255|HAMAP-Rule:MF_00108}. |
Q9RR91 | UBIX_DEIRA | Flavin prenyltransferase UbiX (EC 2.5.1.129) | MSDAPSGPPRLVVGVSGGSGIPYALDILRALRGLDVETHLVVSSGAKRVMSAEGGPQLADLTALASVVHDDRDLAAAVASGSYRTGGMLIVPCSAGTLAKVAHGFADNLISRAAHVTLKERRPLVLVVREDPMPRPMLQNMLAAHDAGATVMSASPGFYHAPESLGELLGFVTARVLDQFGLNAPGFRRWREDEA | Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN. {ECO:0000... |
Q9RRG7 | DCTA_DEIRA | C4-dicarboxylate transport protein | MPKIFRSLYVQVIIAIVLGILVGALFPKFGEALKPLGDIFVKLIKMVIAPIIFATVVSGVAHMRDTRKVGRVGGKALIYFEVVSTLALIIGMVVMNVLRPGAGMNVDPATLDTAGLTKYTEAAGEMTVWDHILKIIPDTLVSAFTGGELLPVLLVALLFGFALMRLGKLGDQILYGIDALNQVVFVILGFIMRLAPIGAFGAMAFTVGKYGLKSLTSLGYLMGSFYLTCLLFIFVVLGLIARAAGFSIFKLIRYIREELLIVLGTSSSESALPRLMMKLEHAGAEKSVVGLVVPTGYSFNLDGTSIYLTMAALFIAQATN... | Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane. |
Q9RRL9 | Y2469_DEIRA | Putative ABC transporter ATP-binding protein DR_2469 (EC 7.-.-.-) | MIELRHVSHHYDERPVLRPLSLTLRERRIGVVGSNGSGKSTFARLLNALLLPAAGQVLVDGLDTRQDPKGVRRKVGFVFQNPDHQIVFPVVEEDLAFGLKNLKLPPAEVEARIGEVLERYDLGEYRQHPSHLLSGGQKQLLAISGVLVMRPEYVVFDEPTTLLDLRNRNRVAAAIRELPQTAIVVTHDLDLLRDFERVLVFEAGELIADAPPAEALRVYRERMTWP | Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity). |
Q9RRM6 | RNY_DEIRA | Ribonuclease Y (RNase Y) (EC 3.1.-.-) | MPTLYVILSLLLGLIGGVLVQRAIGSRQQAVTDDRLQREAQAEAQQIRAEAQRHARELHEAAEQDRQDAISKTQDAARRVQDAAERDTLAAAHEARLDEQREQVRALRAQLEAEREQAKADAAQQREALSTDRQETRREREDLGREIERLGRRTEQLDARSDKLDALEERLEGGWREVQRQEQEVAERLRQADLKLYEVAGLTPEVAREQILGRLNAELEEEKAIRVKAMTEKAGAEARRSARSIIAQAIQRSASETSAQLSVSVVPIPSDAMKGRLIGREGRNIRAFESLTGVDLIIDDTPEAVILSSFNPLRREVARH... | Endoribonuclease that initiates mRNA decay. {ECO:0000255|HAMAP-Rule:MF_00335}. |
Q9RRP1 | ISPT_DEIRA | Isoprenyl transferase (EC 2.5.1.-) | MASLNSALRTAQHVRTATRGALLWGYEQKLAREVKANGKLPRHLGLILDGNRRFARAAGLQREMGHSFGADKAHEVLQWCLELGIPSATIWVLSTDNGSREPAELAHILSLLEREARQLAVDPRIHANRVRVRAIGQHDNFPPQVLAALNNLEESTAGYEGMRLNIAVGYGGREEIVDAVQSYLRTQAAQGATLEQAAENLTPDAIGAHLYAADQPDPDFIIRTSGEIRLSGFMLWQSVYSEYYFCDVYWPGFRRVDFLRALRDFQGRDRRFGK | Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. {ECO:0000255|HAMAP-Rule:MF_01139}. |
Q9RRQ3 | FMT_DEIRA | Methionyl-tRNA formyltransferase (EC 2.1.2.9) | MSAAAGPKVAFFASPAFALPVLEALRAEFEVVLVVAQPDKPVGRGLKLTPPPVAARAAELGLPLAQPHKLRGNADFAAQLRDSGADVAVTCAYGKILPAGVLEIPRFGFLNTHTSLLPRYRGAAPIQWALIRGETVTGTTIMQTDEGMDTGPVLLQEELPIRPEWTSVELSAALSEQAAALIVRALRTLETLTPQPQDEAQATHAPLLVKEDGFVRWADPAQAVLDRFRGVAAWPQTTAFFGGKRLKLAGLTLGQGKGQPGKVLQVGAGGLTVACGEGAVCIATVQPEAKKAQPAQVWAQGQNVEQGARFDLWEPPQG | Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus. {ECO:0000255|HAMAP-Rule:MF_00182}. |
Q9RRR1 | KPTA_DEIRA | Probable RNA 2'-phosphotransferase (EC 2.7.1.-) | MLRRAQTCRSATGNGGLKATVTLQAGFPGVHGVYRHAEVLSNLSVSMRPTFNPFKRGQAALLKLSAGILGRLPSGHTASLPIHTYTVINSAARGHCSFSLPQNRRRRLGLPAEGVPLDPALKNGACASLSVRRWRLFSAAPRAGEGWRHAGTRRVGAAGAAARLPAGQPGAPDAIRREGLRPVHRHHVSLSADTGAAQQVGARRGRAVALVVATGALREAGYDFFRSDNGVWLTDTVPPEYLIRFQIESRTYPGAILRGAHGKNTVLRRWTGIRRLSGCSGIG | Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''-cyclic phosphate (APPR>P). May function as an ADP-ribosylase (By similarity). |
Q9RRU5 | KHSE_DEIRA | Homoserine kinase (HK) (HSK) (EC 2.7.1.39) | MSSPARPFTVRAPASSANLGPGFDSLGLSVPLYTTLRVTPQDKAEVVPLGTELADTPADESNYVYRAMTLAAKRAGRTLPPARVEIETEVPLARGLGSSAAALVAGVVAGNELLGRPLDDETVLDVTAREEGHPDNVAPALFGGIVVATLDKLGTHYVRLDPPAHLGVTVLVPDFELSTSKARAVLPREYSRADTVHALSHAALLAAALAQGRLDLLRHAMQDYVHQVWRAPLVPGLSDILEHAHEYGALGAALSGAGPTVLCFHDQRGSTATLHHYLHDVMTKNGLSGRVMDFPIDAAGTVVEHAK | Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate. {ECO:0000255|HAMAP-Rule:MF_00384}. |
Q9RRW3 | PTH_DEIRA | Peptidyl-tRNA hydrolase (PTH) (EC 3.1.1.29) | MKLIVGLGNPGEKYAQTRHNVGWLVVDELARRAGGSWRKDGEAEVCEVRLGTAPGEKVLLVKPQTFMNTSGKAVWPLMSFYKLEGEQLLVVQDDLDSPFGLLRFRLGGRHGGQNGVRDIIARLGYDRFPRLKIGISRPPAGRDPADWVLSKWRDEERETLAELVRLGVGAAELWAVQGLAEAQQMYNGTDLRPQPPAPPAAPAPAADGAPGDAQD | The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. {ECO:0000255|HAMAP-Rule:MF_00083}. |
Q9RS19 | DER_DEIRA | GTPase Der (GTP-binding protein EngA) | MHKVAIVGRPNVGKSSLFNRLIGRREAVVADFPGVTRDAKEGLMLYHNHRITLIDTGGLWSGDEWEQAIREKAEWAMEGAQAVIFVLDPREGLSAADYEVADWLRRLGKPVIVTANKIDSQKHEPYLAELWGLGFGDPVAISAEHARGLDDLMDRVMKYLPEDDEDVPDIAPIRISLIGRPNVGKSSLLNAITQSDRAIVADLPGTTRDSLDVEWDYGGQRFVLVDTAGIRKKPDTAIEDFAIQRSQAAIERSDVIWLVVNATDIGDHELKLANLAYDSGKPVIVVVNKWDLVPDAELKSTEKDLNQKLHHISFAPRVYT... | GTPase that plays an essential role in the late steps of ribosome biogenesis. {ECO:0000255|HAMAP-Rule:MF_00195}. |
Q9RS84 | PHOU_DEIRA | Phosphate-specific transport system accessory protein PhoU homolog (Pst system accessory protein PhoU homolog) | MREALEADLRAVLNGALNMLGTVERMLPVAAEVLLHERADLLGEVRSLDREVDAQEAQLEAECLRIIALHQPVARDLRLVALILKSLSDIERMGDYVVHVAEDGAELAQAPALKKYVNLSRMLSRLTEMSQNLRTSLADRDVTRAENTTRMDDEVDELYEQIQRELVTYMLEDPRNISKALMLMRVGRSLERVGDHMENVAERVRYWVTGSRE | Plays a role in the regulation of phosphate uptake. |
Q9RSA0 | APGM_DEIRA | Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (BPG-independent PGAM) (Phosphoglyceromutase) (aPGAM) (EC 5.4.2.12) | MSDLLDTVRGLAKKTDSKILMVVLDGVGGLPLTVNGDTELATARTPNLDALAQESQLGQLELVGAGITPGSGPGHLSLFGYDPLKYVVGRGALSAVGIGVKLNRGDVAVRGNFATLGAGRLILDRRAGRPSDEKNAEIVAKLRAAIPEIDGVAVEVYTESEHRFVVVFRAPEGQPLGANISDVDPQVTGVEPKTAIANDPSSEVTAGLINTFVARAEVALADEPQVNGVLFRGYSDVPHFPSFEDAYQLKAACIASYPMYKGLASLVGMDVLPVEGHEDALEGKVKALRENWAKYDFFYFHIKKTDSTGEDGDFAEKVHK... | Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate. {ECO:0000255|HAMAP-Rule:MF_01402}. |
Q9RSH4 | YIDD_DEIRA | Putative membrane protein insertion efficiency factor | MSAAPLVRAVRWYQRVLSPRKPAPTCRFSPTCSEYAAQALDRHGALKGGWLALWRVLRCNPLVPGGFDPVPEHFPARHPRPQGSPPTDHPPTDQPS | Could be involved in insertion of integral membrane proteins into the membrane. {ECO:0000255|HAMAP-Rule:MF_00386}. |
Q9RSH5 | YIDC_DEIRA | Membrane protein insertase YidC (Foldase YidC) (Membrane integrase YidC) (Membrane protein YidC) | MVAGRKAFALQAGDALSPDKPAEAQPAQVKTDLAANRQDAVFRYAQNGVQVTKTITLHPRNFKVDVRTEVRNGPAQVNMLFPGLGKADNPRVQAVPVGGQPASVQGSGTLSVQNIQYAALQENPSQIAHALIVRPQQGTKVDVQLTGGPQGLVTATLPATSSLEVYGGKNELIHLYQSGYTELPGLFQPNFFGQISLLIVKLMEALYKVIGNWGLVIMALTILLRLVMWPLMQAQGRTTARMQLVQPLQKEIQEKYKGKTDPESQRAMQMEMAQLMRDYQVNPAGCFSTLLPFPVLIALWATIRNFEFDSGFLWLPDLAT... | Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning memb... |
Q9RSJ8 | RS11_DEIRA | Small ribosomal subunit protein uS11 (30S ribosomal protein S11) | MAKPTKGKAPRRSRRNISAGRAYVHASYNNTIVTITDLDGNSVAWSSGGTIGYKGSKKGTPYAAQLAAADAVKKAQTSFGMAAVDVIVRGSGSGREQAIRAIQASGIEVRSIMDDSPVPHNGCRPKKKFRA | Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome. {ECO:0000255|HAMAP-Rule:MF_01310}. |
Q9RSJ9 | RS13_DEIRA | Small ribosomal subunit protein uS13 (30S ribosomal protein S13) | MARIAGIDLPREKRVEIALTYIYGIGLTRSKEILARTGVSPDTRVKNLSEAEQSTLREAIEKTYKVEGDLRNEVGQNIKRLMDIGAYRGLRHRRGLPVRGQRTKTNARTRKGPKKTVAGKKKATRK | Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. {... |
Q9RSK1 | IF1_DEIRA | Translation initiation factor IF-1 | MPEQREKKKKDESDSVRAEGVVEEALPNTTFRVKLDTGHDILAYISGKMRIHYIRILPGDRVVLEISPYDTSRGRIVYRR | One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-... |
Q9RSL4 | RS8_DEIRA | Small ribosomal subunit protein uS8 (30S ribosomal protein S8) | MLSDPIADMLTRIRNATRTHKETVDIPASKFKEELAKLLVREGYVQGVERTRPEGQKFDVLRVTLKYGEKREQVIKHIERVSRPGRRAYVSAENLPRVQRGLGVAVVSTSRGLLPDREARQQGVGGEVVCVLW | One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit. {ECO:0000255|HAMAP-Rule:MF_01302}. |
Q9RSL5 | RS14_DEIRA | Small ribosomal subunit protein uS14 (30S ribosomal protein S14) | MANKSKLAKQKQREKTVEKYAAKRAELKAAGDYYGLTQLPRDASPTRLHNRCEFTGRPRGYVRFFGVSRIVLREMAHRGELPGVKKASW | Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site. {ECO:0000255|HAMAP-Rule:MF_00537}. |
Q9RSN2 | YBEY_DEIRA | Endoribonuclease YbeY (EC 3.1.-.-) | MIDLIARKRPPAGLRPALRASLSAAMQHFGGEEREVTVVLVGDPEIRALKLEHWGEDAATDVLSFPTWEPGDPFMPPHLGDIIISLDTAQRQAESRGHSLTREVALLASHGLTHLVGHDHPHAEGLGFEEGATGEDWQVFHDAWAAAQTGLPAGA | Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. {ECO:0000255|HAMAP-Rule:MF_00009}. |
Q9RSN7 | IF3_DEIRA | Translation initiation factor IF-3 | MITIAKDLKVNEQIRVRQVRLIGAEGEQIGIIDTREAMNMAREKSLDLVMVSPQAVPPVCRLLDYGRFRYEQQQNEKENRKRARSQEVKAIKFRVKIDDNDFKTKTGHVRRFLNEGHKVKVTIMFRGRERTHPELGERILVRVAETLADVGAPEGNPSMMGMDMNMIMAPKAPASPKKDKADRPEGDAGDTDMAAPAPAPAAAPETESAPSA | IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. {ECO:0000255|HAMAP-Rule:MF_00080}. |
Q9RSQ7 | NUSB_DEIRA | Transcription antitermination protein NusB (Antitermination factor NusB) | MTRRREKAVQPVGTRRAAREFVFRVLFEADRGDVPLQAVFTRAEGVMREGDDTFPQLGPDALHFAEELVTGLERHREAIDDVLHRTIRGWTFDQMAQTDLNVLRLATYELMYTPEPHPPVIESAVRIARKFGGDDSGRFVNGVLAGLSRNLREEVGESPAADMTAPAPADTAPADTAPADPAASEPDEPRDA | Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. {ECO:0000255|HAMAP-Rule:MF_00073}. |
Q9RSS6 | NUSG_DEIRA | Transcription termination/antitermination protein NusG | MSIEWYAVHTYVGQEDRVQDQLMDRARRLGMYRTKIFQVLQPEEEAVEIQEGGKKVNVKRKLFPGYVFVQMDVEDDDAPGELGESWEVVRGTSGVTGFVGTATRPVPLSPEEVQRLLTSVGVAAQPVVEEAPRIKVDLKAGDMVRVTSGPFADFSGVVSEVNAPQAKVKVLVSIFGRETPVELDFSQVAK | Participates in transcription elongation, termination and antitermination. {ECO:0000255|HAMAP-Rule:MF_00948}. |
Q9RSS7 | RL11_DEIRA | Large ribosomal subunit protein uL11 (50S ribosomal protein L11) | MKKVAGIVKLQLPAGKATPAPPVGPALGQYGANIMEFTKAFNAQTADKGDAIIPVEITIYADRSFTFITKTPPMSYLIRKAAGIGKGSSTPNKAKVGKLNWDQVLEIAKTKMPDLNAGSVEAAANTVAGTARSMGVTVEGGPNA | Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. |
Q9RST0 | RL7_DEIRA | Large ribosomal subunit protein bL12 (50S ribosomal protein L7/L12) | MAYDKQALIDQLGQLTIMELADLIDGLKETWGVTAAVAVSGGGAGAASPAAEEKTEFDVVLIDAGASKINVIKEIRGITGLGLKEAKDMSEKGGVLKEGVAKDEAEKMKAQLEAAGARVELK | Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation (Probable). |
Q9RSW1 | RIMM_DEIRA | Ribosome maturation factor RimM | MTRPEASGPPDATRLGHLLGPHGVQGGIKLYVLGDPAQVLALKRVYVESRGWLSLRRAEGMPPNLVLYLAGVSSREGAEELRGLQVYATDAELPDLEEGTFYYHDLRGLEVYGAGGERLGTVSDVMDAGHQDLLVVDYGGGTSFVPLQAPYVEVPLAGGKPGAVHLTADAPAGLIGPEPGEEDGAAES | An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70... |
Q9RT27 | ACP_DEIRA | Acyl carrier protein (ACP) | MATFDDVKDVIVDKLGVDEGKVTPEARFVEDLGADSLETVELIMGLEDKFGVTIPDEAAETIRTVQAAVDYIDNNQ | Carrier of the growing fatty acid chain in fatty acid biosynthesis. {ECO:0000255|HAMAP-Rule:MF_01217}. |
Q9RT44 | SBCC_DEIRA | Nuclease SbcCD subunit C | MKPLHLTLRGFTAFRQTTDLDFADLELFALVGPTGSGKSSLLDAMTFALYGETARLGATGLDALISQGERTLSVALTFEAGGQTYRVTRTRGRKQADNEVRLDRLDPDGEWTGLSSGSQKDIAQRIEDVVGLDFDTFTRCVMLPQGQFAALLHGKPRQRQELLGELTGMGRVQQMQTFAADQVKDFKHQSQSLSSVLASEYAGVSEEAAAAVRAQREQTDADAERLLQQREELRTQLQRCANXXSLSSREDTARRLTVQESRXEGVRQGAERARRARQVAGVLPLLDAAERARIAYDRQTRELAGAESALQSAQAQAARA... | SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity (By similarity). |
Q9RT57 | LUTC_DEIRA | Lactate utilization protein C | MTTIPSTAEAKLEMLTTINRAIAGSRPEALPPYPVPAPLSRAEILHQFEDRILDYGAAYTHVSAAELPGAIAKALGNARRVIVPAGIPAPWLTVGMDVLRDEPPLSHAELDRADAVLTGCAVAISETGTIILDHRADQGRRALSLIPDFHICVVREDQIVQTVREGVEAVAASVREGRPLTWLSGGSATSDIELVRVEGVHGPRRLQVIVVG | May function in L-lactate utilization. |
Q9RTA9 | GATA_DEIRA | Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC 6.3.5.7) | MAAFQTAAQLARAVQSGETTPQQLLHGALARAEAVRGLNALVSLNSHAEEQAAAVQGRMQAGETLPLAGVPIVVKDNINVTGTRTTCGSRMLANYVSPYTATAAQKLQGAGAVIVGKANMDEFAMGSSTESSASGPTLNPWDHERVPGGSSGGSAVAVAAGISPVSLGSDTGGSVRQPAALCGVYGFKPTYGRVSRYGLVAYASSLDQIGPFARSAEDLALLMNVIAGHDPRDATSLDAPARFAVGGADSLRGLRVGVIRESLGGNTPGVEAALGATLDALRGAGAVVGEVSIPELEYAIAAYYLIAMPEASSNLARYDG... | Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). {ECO:0000255|HAMAP-Rule:MF_00120}. |
Q9RTD9 | PROA_DEIRA | Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41) (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) | MTQTDSLPGVQATVQDMGERARRAARVLRSLPTGRKVQALRALAAELRAREAGILAANAQDVQAAEAAGLPAPLVDRLRLSAGALAAIARDVEAVAALPDPVGEQTDEKTLPSGIRVSQRRVPLGVLGVIYESRPNVTVDVAALALMSGNAAILRGGKETVNSNAALEDAIHAALNREGLPADAVQVIRDPDRARMLELLRLDESVDAIIPRGGAGLHRFCVENATVPVIVGGIGVVHIYLDGSFVQTPQDVQIAAALIRNAKTQKPSACNALDTLLIDRAALAALPDVVRPLLESGVEVRADAEAQAALAGAGLNVTSA... | Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. {ECO:0000255|HAMAP-Rule:MF_00412}. |
Q9RTF3 | GCSH_DEIRA | Glycine cleavage system H protein | MTTTPTDRKYAASHEWLTQDGTVGISDHAQEQLGDVVYVELPEVGREVKAGEAVAVVESVKTASDIYAPASGTITAVNDELSGSPEKVNESPYEGGWLFKLDVTEEGDLLDAAAYEAQAN | The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. {ECO:0000255|HAMAP-Rule:MF_00272}. |
Q9RTG5 | IF2_DEIRA | Translation initiation factor IF-2 | MSKVRIYTLAKDLGVDNHKMLEILDGLGVSYKSVSSTIDEENVEIIKQILADEAAEGGDAAPAAASAPAAATAEPEEADETPAAAAQADAEPASDLPHRAPVVTIMGHVDHGKTSLLDYIRKTRVAAKEAGGITQHVGAFEAKTSKGKIVFIDTPGHEAFTTIRARGANVADIAIIVIAADDSLMPQTREAIAHAQAAKVPMLIAINKVDLPQADPEKVKTDLTQLNLVPEEYGGDVIVVPVSAKTGEGVEDLLEYISLTAELEDLRADPKGQFSGVIIEGRVDKQAGVLATVMVQEGTLHVGDFLVVGENYGKIKAMTD... | One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex. {ECO:0000255|HAMAP-Rule:MF_00100}. |
Q9RTG8 | RIMP_DEIRA | Ribosome maturation factor RimP | MNNKTNNNSVLFDLADGAVRPLGFEVLEVTQQREGRDLIVLVRIDRLDEQPVTMDDLTAASRAAEAEFDRVDPIEEEYRLEFESPGGKRPLLRARHFERMIGLKAKVRSLPGRGEHNFTAPIKAVEGDTVTFEHGGEDLSVNVADIQASLAEFPDRHR | Required for maturation of 30S ribosomal subunits. {ECO:0000255|HAMAP-Rule:MF_01077}. |
Q9RTJ3 | DRRP_DEIRA | Desiccation/radiation resistance protein DR_1769 | MPDPAARRFSLPPFPLAALALSVALLGAPASLAQTAAPAPAPAQTPAAASRAAAPRVSWTKPLKVSSPVSIGPRGELTYVGNDSRVHRTDASGKELWSFALGDIGRAQPVLTPDGGVITAAYDDTVYALSPAGQLTWKAKLDGDVFASPALRPDGSVVVATAGGTVYALSSSGQTLWSYKVGAPVFSSPAVAADGTIYFGAQNGRLHALSPEGRLTWTYAARSSVFSSPALDAEGNLYFGSGDRSIYSLSPAGTLRWVQPTGLFVNASPIVTRAGLVVVGSYDGQLYALNTNGQVAWTYAAGAAIAAPAAELSDGSVVVG... | Plays an important role in resistance to desiccation and radiation, maybe by protecting genome integrity under extreme conditions. |
Q9RTK7 | MINC_DEIRA | Probable septum site-determining protein MinC | MLTAQITVEIQGDTHPEAVEAALQGVREAGGTLGRVRAPRLTVNMPASVAAEPVTSAQTVIVPHSVRAGFRGEYRGSVVVLGDVNPGAELIAAGDVIVAGALRGVVHAGYGGTHPDPIVWARPIASAQIRIGDAVARAPEGSSNMRRTDRTERAERAYLQDGMIVIDVQ | Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization (By similarity). |
Q9RTP8 | MNTH_DEIRA | Divalent metal cation transporter MntH | MDSRSPSLPDDRPDPPEQHLDARAGATLRGTAGPRGVRRILPFLGPAVIASIAYMDPGNFATNIEGGARYGYSLLWVILAANLMAMVIQNLSANLGIASGRNLPELIRERWPRPLVWFYWIQAELVAMATDLAEFLGAALAIQLLTGLPMFWGAVVTGVVTFWLLNLQKRGTRPLELAVGAFVLMIGVAYLVQVVLARPDLAAVGAGFVPRLQGPGSAYLAVGIIGATVMPHVIYLHSALTQGRIQTDTTEEKRRLVRLNRVDVIAAMGLAGLINMSMLAVAAATFHGKNVENAGDLTTAYQTLTPLLGPAASVLFAVAL... | H(+)-stimulated, divalent metal cation uptake system. {ECO:0000255|HAMAP-Rule:MF_00221}. |
Q9RTR0 | MUTL_DEIRA | DNA mismatch repair protein MutL | MPTPIHVLPPHVARLIAAGEVVSRPLDVVRELVENALDAGASRIEIEVDGGGLERVQVRDNGSGIAAQSVPLAPARHATSKLTAGPETGSLSVTTLGFRGEALWAAAQAGELELTTRPAAQVGAARLRAQGDAVEVSRTSAPAGTTVTVSQLFARLPARLRTQASAAAEVRDITALLGRYVLHHSALHWRLTVDGDPRLTHAPADHRGAVATVYGPLSANRVLTLDTPGVRGVVSRPELTRARRDRMHFAVNGRPIVAPPELERAVIDAYAELLPAGTAPLCVLDLTVAPEDYDPNIHPAKQVVALADLPAVALRVRDAV... | This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part ... |
Q9RTR9 | GLUQ_DEIRA | Glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) (EC 6.1.1.-) | MTVTGRFAPSPTGAMHLGNARTALLAWLHSRALGGRHLLRFEDLDTGRVRGWAYDLTRRDLEWLGLDWDEEFRQSERLDLYAAALAGLDTYPCTCTRKEVLAAIADSAGAPHGEEAVYPGTCRPGSVHPERPAARRWRVPEAESCVTDALSGDTLCQWLPRDVGDFVLQRNDGVYAYHLAVVVDDALMGVTDVLRGADLWTASPRQAALHRALGFTPPRFLHVPLLSNYRGERLAKRGGAPPLSEWREHGEAPGRVLADLAHTLPWPGFQAVPEEVTAPELLPLWGDVLAERPGT | Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon. {ECO:0000255|HAMAP-Rule:MF_01428}. |
Q9RTY5 | LEUD1_DEIRA | 3-isopropylmalate dehydratase small subunit 1 (EC 4.2.1.33) (Alpha-IPM isomerase 1) (IPMI 1) (Isopropylmalate isomerase 1) | MPRIWKFGDSVNTDDILPGKFAPFMAGEDVFQTFAFHYVRPEFAAQVQPGDVLIGGRNWGLGSSREYAPQALKKLHIGGIVAPSFARIHYRNLLNLGIPAFEYDLTELLEDGDEVTLDAQTGLLTYADGTVQLPPPPEFLREALKEGSILEFFKKHGRFPGEEPGAEASTETASAAE | Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate. |
Q9RU19 | QUEA_DEIRA | S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) (Queuosine biosynthesis protein QueA) | MPDSTADPSTADEVLARLHFDLPEDRIAQTGAEPRDTSRLMVVGEQIKHRMFRDLPDLLRPSDLLVFNESRVIPARVLARKPVVNGFGGGQVEVLLLREEFDVGANVWSAYLKPAKRAGHELWLGENEATGHRAEVVGVLDDGARLLRFDHDIKPHLDEIGRLPLPPYINAGDSDETWRERYQTVYAKTPGSVAAPTAGLHFTPELLARLDEMGVERASVTLHVGAGTFKPIQGPVADHVMHAERYEVSETNAAAITRAKAEGRRVVAVGTTTVRTLESAWDGAAVRAGAGETRIFITPGTRVEVPDLLITNLHLPGSTL... | Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). {ECO:0000255|HAMAP-Rule:MF_00113}. |
Q9RU24 | UF71_DEIRA | Probable ABC transporter-binding protein DR_1571 | MKKVMMLALALGASTSLAAPFVYPANWTSNKPGDVQTGGTFRSVNLQDFKTLNPFVSSESPNLPAVLSAGSLLGYNPVTGNYAPYMAEKYTQSADKRTFTFDIRKGMKWSDGKPITVDDWITAYTIDSNKDVGSNTFDYWTINNQPIKVTKVDSNTLKVVFPKADVTAIEFLSGIFLPQPTHVFMPVWKAKGAQGIKDMWTISTNPDNIVTSGPFMLDRYVRGERAILKKNPYFGEWNKDSAGKSLPYLDGIQINIVADANAQLAQFLAGNLDTYSPDNRDKLAQVKSAMDGGKVKGTLIPNASARASSDFMVFNMDDSA... | Probably part of a binding-protein-dependent transport system. |
Q9RU72 | PRMA_DEIRA | Ribosomal protein L11 methyltransferase (L11 Mtase) (EC 2.1.1.-) | MLVYLLPGSFDTREAHLDLLWEAGATGLEERGPNIRVYFDERTELPAEVADGEWHEEAEQDWQAEFKKNLRPVHAGRVTIVAPWQREEVPAGQLALVIEPGMAFGTGHHATTRMAVEALGELDLSGKRVLDVGTGSGVLAMAAAKLGAAQTLGVDIDPITIPIARDNARDNGLTSGIRFEEGTLGLDEDAEMFGEPYDVLVANLYAELHDLLAGEYAAQLRPGAPLILTGILTSKLPLVRDALDREGFTDVQVRTDSEGAGGEWALVTARRED | Methylates ribosomal protein L11. {ECO:0000255|HAMAP-Rule:MF_00735}. |
Q9RU80 | EFTS_DEIRA | Elongation factor Ts (EF-Ts) | MMESIKKLREMTGAGMMDVKKALADAEGNEDKAIALLRERGIAKAVKKGDREAKEGIVRFAVDGNRAAMVEVNSETDFVARNADFQATVEKLAQAALQAKTNDVEEFKNFTVDGETVGNMVAATAGKIGENIVLNRVAYLEGQQVAGYVHSNGKIGVLVDLAGGDEAKAKDVALHVAAERPQFLTRDEVESGDIEKEREILTNKALAEGKPQQIVEKIVEGQIGKFYQERVLPEQTFVKDNSLTVAKYLGDASVNKFVRFEIGA | Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. {ECO:0000255|HAMAP-Rule:MF_00050}. |
Q9RU82 | RRF_DEIRA | Ribosome-recycling factor (RRF) (Ribosome-releasing factor) | MADMKSIQADTREKMNKAIEAFENNLSVLRTGRANPGILKKIVVDYYGSQMPIDQVASITTPDPRTLVITPWDRGALNPIEKAIRDSDLGLNPNNKGDTIFISLPMLTEERRKDLVKNAKNYAEDARIAVRNLRKHALDEVKKVEGLGEDEIKRGEADVQKITDEYVARVESVFQKKEQEILG | Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another. {ECO:0000255|HAMAP-Rule:MF_00040}. |
Q9RU88 | NUOC_DEIRA | NADH-quinone oxidoreductase subunit C (EC 7.1.1.-) (NADH dehydrogenase I subunit C) (NDH-1 subunit C) | MTAPDAGLPETNLRDTAARSTRRLAESRDVAPLLAELGLSAEEGLQPTAAVEAGELLHTAQQLRARGFMLLDVIGVDYSRYTAPRPQPFAVLYSVAHPRDHRRLFLRVWLSEGEAVDSLFPIWKAANYLEREVYDLLGIEFTGHPDLRKVLTPDDLEGHPLRKDFPLGETPTLFREGRFLDPAAFRAGLSGQQRGLTGYRGEMRRGERRREDIVPPLLPEGGPK | NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions ar... |
Q9RU89 | NUOD_DEIRA | NADH-quinone oxidoreductase subunit D (EC 7.1.1.-) (NADH dehydrogenase I subunit D) (NDH-1 subunit D) | MTAELQPEAGALLHTELMSLNVGPQHPSTHGVLRLVVDMDGEYVTRVEPHMGYLHTGFEKTMEHRTYQQNVTYAPRTDYLHSFSHELAYVLSVEKLLGAEVPERANVVRVILHELGRIHSHLVFVGTGLLDLGALTPFFYAFREKEACQDLFEAVCGYRMNQGYFRVGGLARDLPEGWTARVEAFLNQMERGVEEYTTLFAANPIFLDRAKGVGVIPADAALDLGLTGPNLRASGVPLDNRKDHPYCGFEDYDFNVISSPDGDSLARFNMRLLEFSESIKIIRQGLQKLRPGPIKDPNRKISLPPRHELETSMEAVIHHF... | NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions ar... |
Q9RUC1 | SSRP_DEIRA | SsrA-binding protein (Small protein B) | MRRVYTNRRAHHEYELLERFEAGISLTGSEVKSVRAGGVDFRDAFARINGSDVDLEGLYIPVYKEATYNNHEPRRKRRLLLHREEIEKLRRGLEQKGLTLVPTRLYQKGRYFKVELALARGKKLHDKRRADAERTVARELREL | Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene the 2 termini fold to resembl... |
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