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UniProt_function_text_descriptions

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Q9ZCS2
RS5_RICPR
Small ribosomal subunit protein uS5 (30S ribosomal protein S5)
MSKVKKNEEALSEVLVDVNRVTKVVKGGRRFAFSAYVVVGDKAGRVGAGHGKAKEVNEARGKAKQAAKKRMMKVPLYQNRTIHHDVVGKSGAAKVILRRAKAGTGVIAGGSMRAIFDSLGVHDIVAKSIGSTNVYAMISATFDALNKLASPKSIAIRRDKKVHEISIKSYIQVNE
With S4 and S12 plays an important role in translational accuracy. {ECO:0000255|HAMAP-Rule:MF_01307}. Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. {ECO:0000255|HAMAP-Rule:MF_01307}.
Q9ZCS4
RL15_RICPR
Large ribosomal subunit protein uL15 (50S ribosomal protein L15)
MKLNELYNNLGAKKNKKRIARGIGSGKGKTAGRGIKGQKSRSGVAIKGFEGGQTPMIKRLPKRGFKCISTKKYNIINIYNIEEALTDGRLSTNDIITKEKLLEVGLINNKNLVKLLSICSDDFASPLSLKLDAYSSKAKYLIEKVGGQLL
Binds to the 23S rRNA. {ECO:0000255|HAMAP-Rule:MF_01341}.
Q9ZCS5
SECY_RICPR
Protein translocase subunit SecY
MGQNFSKKSSNDLVNRIIFTLFMLIICRFGSFIPIPGIDSIALNSVAEKNQFGILGMFNMLSGGSLGRMSIFALAIMPYITASIIIQLMSVAYKPLENLKKEGETGKRKINQLSRYLTVLLASFQAYGVALSLESMVTNTGPVVILAGFFFRVTTVITLVVGTILLMWLGEQITQRGIGNGTSLIIFIGIISGVPSAIISMFELSRKGALSPLIAITVCIGVVLLIAIIIFFEKAQRKLLVQYPKRQVGNKIYGGEATHMPLKLNTSGVIPPIFASSILLFPTTLASFSNSNSDTMSMLTYYLGHGKPVYILLYVVLIMFFSFFYTAIVFNSEETANNLRKYGAYIPGKRPGKNTSDYFDYILTRLTVIGGIYLSVICVIPELLMNKYVISLSLGGTSFLIVVNVVLDTMTQIQTYLFSSKYEGLMKKIKLKN
The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently. {ECO:0000255|HAMAP-Rule:MF_01465}.
Q9ZCS7
RS13_RICPR
Small ribosomal subunit protein uS13 (30S ribosomal protein S13)
MARIASVNIPDNKRLVVSLTYIYGLGSTMAAEICNKAKISKDKKVKVLTDQELISLRNIIENEYKVEGDLKREVTLNIKKKKDIRCYQGLRHIRKLPVRGQNTHSNARTRKGKAIAIAGKKKTVK
Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. {ECO:0000255|HAMAP-Rule:MF_01315}.
Q9ZCS8
RS11_RICPR
Small ribosomal subunit protein uS11 (30S ribosomal protein S11)
MNQTIKVKKKKKTITLGVVHIRASFNNTIVTFTDIQGNTISSASAGGNGFKGARKATPYAAQVTIDKASEKAKECGLKTISIRIGGPGAQRESAMRALFGQNFVVTSILDVSSIAHNGVRPPKRRRV
Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome. {ECO:0000255|HAMAP-Rule:MF_01310}.
Q9ZCT1
RS20_RICPR
Small ribosomal subunit protein bS20 (30S ribosomal protein S20)
MANHSSAKKVVRQTVKRTLINKKRSSAIKTFIKKVIHEISRGNKEDANLALSIAQSKIMQGVKKNIIKLNTASRKIRRLSKQIKNLYKSE
Binds directly to 16S ribosomal RNA. {ECO:0000255|HAMAP-Rule:MF_00500}.
Q9ZCT4
GRPE_RICPR
Protein GrpE (HSP-70 cofactor)
MKDYNIENNNVEEENPNVETQVVDNEEIVRLKAEIEELKDKLIRTTAEIDNTRKRLEKARDEAKDYAIATFAKELLNVSDNLARALAHKPANSDVEVTNIISGVQMTKDELDKIFHKHHIEEIKPAIGSMFDYNLHNAISHIEHPDHEPNSIITLMQSGYKIRDRLLRPAAVQVVKKP
Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. {ECO:0000255|HAMAP-Rule:MF_01151}.
Q9ZCT6
CH10_RICPR
Co-chaperonin GroES (10 kDa chaperonin) (Chaperonin-10) (Cpn10)
MSFKPLHDRIAIKPIENEEKTKGGIIIPDTAKEKPMQGEIVAVGNGVLNKNGEIHPLELKVGDKVLYGKWAGTEIEIKGEKLIVMKESDVFGIIN
Together with the chaperonin GroEL, plays an essential role in assisting protein folding. The GroEL-GroES system forms a nano-cage that allows encapsulation of the non-native substrate proteins and provides a physical environment optimized to promote and accelerate protein folding. GroES binds to the apical surface of the GroEL ring, thereby capping the opening of the GroEL channel. {ECO:0000255|HAMAP-Rule:MF_00580}.
Q9ZCU7
NTRYL_RICPR
Putative sensor histidine kinase NtrY-like (EC 2.7.13.3)
MLSDLKQNLRSYFSSRILILALAIASIISVCTTFYVISLEAKNFSTIIGFLLIDLAIFLILGILLTQKFFTKNNDNDSSKLQNRIVIAFSLVAAIPTIIVSVFSVYFFNLSVKAWFDKKISTVLDQSVIVAETYIAEHKVQLKETALAVAEDLSDMYYDLIHNPALFTKTLNTEADMRSLDEAIVLNKSTNTIVANSYLSFSLSFATIPAHLIKKADLGEPVEVKSDPTTIRMLIKLKEYNDVYLLVGRLVDNKIIDHIDATNGAAAEYNSLKNEIDNIQIKFSIMFIFIALLLLFVAINFGVLFTAKIVKPIKKLVTATDKVKDGDLTVQVPENEVDKDEIGTLYAAFNRMIKQLSRQQRDLVIAQRAMAWSDVAKKVAHEIKNPLTPILLASERLLKKFSSEINEKSEFESYLKMIIRHTNDIKNIVSEFVLFARLPAPKFTKSELVYLVKHIIEARKLLNDNIVYTYDSNVDQFDFMCDATQINQVMINVLKNAEESIEGQEFGKIDVILDAKDDFISVIVMDNGKGFPPELIGKATESYVTTSSKGMGVGLAIVKRIVEEHCGVLDIANREDEGAIIDIKFDLKELHLKVRRSGG
Member of the two-component regulatory system RP614/RP562.
Q9ZCU8
RNPA_RICPR
Ribonuclease P protein component (RNase P protein) (RNaseP protein) (EC 3.1.26.5) (Protein C5)
MKLCITSLKNQKEFELINKLGEKFYERYFILVIAKKLPKIFLESKYNTFLGIKVSRKLNKKAVVRNKIKRRIRHLMRIIVNDSNFKAIKFAIIIIPKKGFEEINFSHLQYELSKIILRNIY
RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. {ECO:0000255|HAMAP-Rule:MF_00227}.
Q9ZCV0
RL20_RICPR
Large ribosomal subunit protein bL20 (50S ribosomal protein L20)
MTRAKSGKISKKRHKKILKLAKGYRGRANNCFRVAIEKVEKGLQYAYRDRRNRKRDFRGLWIQRINAAVREHGLIYSQFMGALKKAGINIDRKVLAELAVNNNDGFASIVQQSKAHI
Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity).
Q9ZCV3
RL25_RICPR
Large ribosomal subunit protein bL25 (50S ribosomal protein L25) (General stress protein CTC)
MSGILELEAKSRTEFGTGAARALRREGRVPAIIYGAGKTPISISLKEKEITKYYRKPAFISQLINLTIDKKQYKVLPKAVELHPVTDIVRHVDFVFLEAKTQKMEVPIVYEGKERALGVKRGGYFNIIKRRVILLCDVNNIPRNVTIDVTNMPIGTSLKSSQVELPKGCSFITKKEFVLATIIGRRGVKTEIEGEQEVAEAIQ
This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. {ECO:0000255|HAMAP-Rule:MF_01334}.
Q9ZCV4
PTH_RICPR
Peptidyl-tRNA hydrolase (PTH) (EC 3.1.1.29)
MILVIGLGNPGTEYQYTRHNIGFIAIERIASKYHLSFSIKKKFNCEIAEAVIDRQKIIFIKPTTYMNLSGKSVILVKTYYNIKYEKVFVIHDDIDLEIGRIKFKTGGGNGGHNGLKSIDVVIGNHYNRIRIGIGRPKNNHDVADYVLNNFSESEYKIAMQSIDNIANNFGLILEHKLAEFTNKIV
The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. {ECO:0000255|HAMAP-Rule:MF_00083}.
Q9ZCW4
MURJ_RICPR
Probable lipid II flippase MurJ
MTLFRSGIILAFLTFIARIFGLVREQFIASLFGSTPMGDSMNIAFKLPNLFRRIFAEGALSSVFIPIYNEKMLISKKAANNFSGKVFTLLSLTLIVIIALMQIFMPQLILCIAPGFYAKKEKFELTVFLCRITIPYLIFVSLTALLGGILNSVKKFAAFAFSPIILSVCVIIFTLIFGNYIESTISISVSLIIAGILQVVFMFICVKKADLHFPIIFHTNDPDVKKLLINMGPATISSGVQQLNLFISQSISSFIEGAISILAYADRIYQFPLSIIGTSFSTILLPEMSKVYKSNDIVSAQKIQNNAIRIGLLLSLPATFGIIILSHPITNIIYERGVFTPQDTTNTAEAISAFALGLPAFILAKILTPIFYANGDTKTPLKITLFSIIINTNMNLLLMDSLKHIGIAVGTSIAAWYNLGLLYSYSTKQHKLHIEAGIKLFCAKILLCCTLMSIIIALIKHYYLEYLYSEYLLIKVSMLGSTIIIGVAIFFGTAYLLKVVNYDNSTK
Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. {ECO:0000255|HAMAP-Rule:MF_02078}.
Q9ZCW8
SECD_RICPR
Protein translocase subunit SecD
MQNLPKWKIVLSIICTVFAIICALPNFIQINSKFLPHDSINLGLDLRGGANLLLDVDFDTYLNDSMENLADTLRKNLRKHKIGYKNLLVRHNNIQLEVRSPEVLKSLKKIINKIDPEIIIGVNKNKIKLRYSESRFNDLLNKVVEQSIEIVRMRVDSTGTKEPTLQRQGNKHILLQVPGSENPSYLKNILGKTAKLTFHLVDENANIEDAIKGHVPLGSMLIKGDSKHHGEYYIVIKKKVLLSGAHLTKASASFDQNSQPIVAFSFNNLGSKIFGEITKNNTGKRLAIVLDNKLLSAPIINGAIIGGNGIITGNFTIESANELALLLRVGSLPTPLKIIEERSIGPNLGADSIESGKKAGLIGFVAVCIFMILSYGVIGLFANIALILALLYILALLSLFQATLTLPGIAGIILTIGMAVDANVLIYERIKEELHKGVSNLYAIRTGFESAFATIIDSNITTLIVAFALYIFGVGAIKGFAVALTIGIISSMFSAIIITKLLIDVWVKYFKPKKLGLL
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. {ECO:0000255|HAMAP-Rule:MF_01463}.
Q9ZCW9
YAJC_RICPR
Sec translocon accessory complex subunit YajC
MSQHTQDNQINNNETIEIQETDTVPVETNSLQSGLTSLIPMILIFAVFYFLLLRPQEKRRKEREKLVSGVKKGEEVLINSGIYGIVTKVSENDNNIEIEIAKDVRIKAIKSAIVDITSRKREVAATQENNKKNKKVSCAKSS
The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
Q9ZCX4
RPOZ_RICPR
DNA-directed RNA polymerase subunit omega (RNAP omega subunit) (EC 2.7.7.6) (RNA polymerase omega subunit) (Transcriptase subunit omega)
MARITAEDCNKIIPDRFRLVVLATRYAKLLNYKVETNQIKKEKRDKPPVISLRRIAAGKVSVPQLEQDLINSLRTRMMIEPLINQDESEDVEEKFEYLPEVYIGEDYSDLDDQIFINENGEDYETDK
Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits (By similarity).
Q9ZCX5
ACPS_RICPR
Holo-[acyl-carrier-protein] synthase (Holo-ACP synthase) (EC 2.7.8.7) (4'-phosphopantetheinyl transferase AcpS)
MLIGVGTDIVQIPRIEKILNIYQELFAKKILALKELKQFTLLNKTNHATFLAKRFSAKEAVSKAFGVGIGRGINFKDITILNDNLGKPTVEISSHYTNKLAPFNIHLSLSDDYPICIAFAIIESNC
Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein. {ECO:0000255|HAMAP-Rule:MF_00101}.
Q9ZCX9
UVRC_RICPR
UvrABC system protein C (Protein UvrC) (Excinuclease ABC subunit C)
MSLEISGSKLIKAQIIDAPECSGVYKMLDVNKQVIYIGKAKILKKRLTNYIKSDLDNKTLRMISNTYFLEYIITNSEVEALLLEAQLIKKFQPKFNILLKDDKSFPFIKLSLDHDFPQLIKYRGKALSDGKFFGPFASNTQVNTTLTELQKIFKLRSCTDNYFNSRTRPCLQYEIKRCYAPCVGKINKEDYRELVMQVKDFLQCRTIALQANLSKKMQELSSQMRFEEAAEIRDRIKALSYVQLKSGILDVVRDADIIAIVHKNLHYCIEVSLYRAGQPYGAIPYFFSSTENSTHEEVLEYFLLQFYQKQQVPSEIIMNHEINSKENMIEAIKKINNISDLSITVPHKGGKAKLVQKAEVNALLSLEQYLKKSIKNTDIMFALKKLFDLPEIPERIEIYDNSHLQGMFAVGVMVVAGQIGFDKKEYRVFSLSSRSLTIGSEIELRDDRKGDDYGMLRQVLTRRFTRLKNEPHKLPSLMIIDGGKGHLTIVKEVMDKFEINIPFVCMSKGRDRNAGLEQLHMQGKEVLTLDKNLPIMKYLQILRDEAHNFAIKNHRLGRSRAIKISSLDEIDGIGETRKTALLHYFGSYKAVCNATIDELTKVKGISKSLASMIFNILNRKISLDNS
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. {ECO:0000255|HAMAP-Rule:MF_00203}.
Q9ZCY2
RSMH_RICPR
Ribosomal RNA small subunit methyltransferase H (EC 2.1.1.199) (16S rRNA m(4)C1402 methyltransferase) (rRNA (cytosine-N(4)-)-methyltransferase RsmH)
MSQYHIPVMLSEVLAVLAPKGYESYLDCTFGAGGYSNAILNSCYCSVTSLDRDPNVIESVEKIKQDYGERFNFIKTNFADSFRKLKHKKFDGIVMDLGVSSMQLDIADRGFSFLYDGPLDMRMSVQGFSAEEFVNTADEEEIADVIYKYGNESLSRRIAKSIVEYRKTARIDSTRKLAEIVRYSIGFRKGKIDSATKTFQAIRIYINNELEELEQFLANVKNILKKDGRLVVVSFHSLEDRIVKNFFKENSEKQVARSKYAKDEIKIDPNKWLKIITPKVLTPSSQEIRLNVRARSAKLRAAKKII
Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. {ECO:0000255|HAMAP-Rule:MF_01007}.
Q9ZCY9
NTRXL_RICPR
Putative response regulator NtrX-like
MSQLDVLIVDDEESIRNLIAANLKDEGFNPKIAANSTQALKIISEKPVSAVILDIWLQGSEIDGLGVLEIIKKRYPLMPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLIILLKRACEVTKLKRENIDLKSKVIDKTELVGGCPVTLKYKMEIEKAASSSSRIMIHGKVGSGKELAARLIHKQSKRVNNPFIIFSPTCMTTEKINQELFGESEKQENNNKRPTILEFANNGTLYIDEISNIPIPIQVKLLKFLKDQTITKPCGKKTKVDIKIITSTAKNIQDEVNNGKFLEDLYYRLNVFSLKVPSLYERKEDIPLLVKYFVKQLSKFSGLKERHFSDEAIAALQSYEWPGNIRQLRNVVEWTLIMNPLTTGNNEIIKPYMIPSEILANSANLTKLEDSFDMLSMPLREAREVFERQYLSAQMSRFNNNISKTSSFVGMERSALHRKLKLLSLHIPPTNRINEEEYEKANA
Member of the two-component regulatory system RP562/RP614.
Q9ZCZ6
RIMP_RICPR
Ribosome maturation factor RimP
MQTIAQQITNIIEESLTDMGFELVLVKFKGVSPKVVEVLIDSLNGNKISIEDCTNVSRTISAILDVEDLIEEAYSLEVSSSGIERTLVKFENYNRFLGREVKIKLKELLNGKTLYPR
Required for maturation of 30S ribosomal subunits. {ECO:0000255|HAMAP-Rule:MF_01077}.
Q9ZCZ7
NUSA_RICPR
Transcription termination/antitermination protein NusA
MSNIYNIEILQIIDSVAREKGISKEILISTVEQAVQVAGRKKYGNEYNIKAQINRKTGEINLLRILKIVEDVEDYLTQISLEDALVKNPEAKIGDEIYEYLPPIDHARVSAQAAKQVITQRVIEAEREKQYHDFKDRKGDIINGIVKRIEYGDIIVDLSRAEAIIKKDQLIKGEHFKPNDRIKAYVQDVRQETKGPQIFLSRVDNQMLVKLFKLEVPEILEDIIQIKSVARDPGSKAKIAVFASDSSIDPVGSCVGIRGNRVKAVTNELNGEKIDIVLWSNDLAQFIVNSLIPLAPSEITKILIDEDSHKVEVVVSQEHQSIAIGRRGQNVRLASKLTGWNIDIMTEEQESKRRNEEFSTSTELFMEALDVEEVIGQLLSVTGFNSVEQIASSEISTLTRIEGFEEELAVEIKNRAIHYVDLKNEKIIKKLEELGVEQELIDILELPLELILKFAEYGIKTIEDLGEMSVNEFKNLAPNSNITDENIKLLIKTARHHGELKDS
Participates in both transcription termination and antitermination. {ECO:0000255|HAMAP-Rule:MF_00945}.
Q9ZCZ8
IF2_RICPR
Translation initiation factor IF-2
MTDNQEIKPKKLTLGNSKLLLNKSFDSLTGAQSFVNAKSKTLVEVRKSSIGSTTTISLNKERNSLDQSVIDSNKEEFNRRLSILKKAAEQSKLHDPAQISTLSKLASINQSINSKNEQSITDKAVEQKHQNIEDNKVEIAAKIVQDNENISSQIPKKKKETLAKSVLVGMRTRYGIEEEPALEKTVDNKVVVPKIKLEESKKFKKADLFNMLSDDENGSGRTRSLASIKRAREKEKRKLVSQVPEKVYREVTIPEVIGVGDLANAMSERVADVIKELMKLGILANASQTIDADTAELVATNLGHTVTRVQESDVENILINDDKVEDLRTRAPVVTVMGHVDHGKTSLLDALKSTDIAAGELGGITQHIGAYRVTLADSKAITFIDTPGHEAFSEMRSRGAKVTDIVIIVVAADDGIKTQTVEAINHAKAAGVPIIVAINKIDKPDIDIERIKNELYVHEIIGEEAGGDVIFIPISALKKINLDKLEEAILLISEMQDLKASPFGLASGVVIESKIEKGRGTLTTILVQRGTLRNGDIIIAGTSYGKVKKMINDKGREILEATPSVPVEIQGLNEVPFAGDQFNVVQNEKQAKDIAEYRIRLAKEKKISVASRSSLEELLLKASGNSKIKELPLIIKCDVQGSIEAISGSLLKLPSDEIKLRILHSGVGPITESDVSLAHVSSAIVVGFNVRAWANALTAAEKTKVDIRYYSIIYNLIDDVKAIMSGMLEPIVREQYIGSVEIRQIFNITKIGKIAGSYVTKGIIKKGAGVRLLRDNVVIHAGKLKTLKRFKDEVKEVREGYECGIAFENYEDIREGDTVEVFELVQEQRQL
One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex (By similarity).
Q9ZD09
UBIX_RICPR
Flavin prenyltransferase UbiX (EC 2.5.1.129)
MIKNKKIIIAISGASGAIYGIRLLKVLKEQNIETHLVISDGAALTIKFETKYSIQEVKFLANYCYDEKNLGAAISSGSFKTAGMIIAPCSMKTLASIAHSMEDSLISRAAGVVLKERRKLILMTRETPLHIGHLENMLKVAHYGGIIAPPIPAFYNKPTRINDIIDHSITRVLDFFDIETNLIKRWSSD
Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN. {ECO:0000255|HAMAP-Rule:MF_01984}.
Q9ZD15
SODF_RICPR
Superoxide dismutase [Mn/Fe] (EC 1.15.1.1)
MTYCSKANQPSYPFILPDLPYDKESFKPHFTRETFDYHHGKHHNSYVQNLNNLIKDREELQKKDLEEIIEWSSQNAEVAILNNASQIWNHTFFWYSIKPHGGGKPSGKVFEQISKDFGSFEQFCAQFKQEAVGQFGSGWTWVVYHDNKLQIIKTSNAGTPIVNFMKPILACDVWEHAYYIDYRNKRSDYIDIFIRHMINWKFVEDNLIQ
Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems. Catalyzes the dismutation of superoxide anion radicals into O2 and H2O2 by successive reduction and oxidation of the transition metal ion at the active site.
Q9ZD19
IF3_RICPR
Translation initiation factor IF-3
MYLFINIIWRNFISKNNLPKANREIKAKEVRLVDENSEMYGVVNIREALDMAERAGLDLVEISPNAVPPVCKILDFGKFKYESKKRLHEARKKQKVVVLKEMKFKPNISIGDFETKLRKIKEFLKDGDKVKISLWFKGREILHKEVGHELFKRIELALEGLIKIDQHAKMEGKQMIMIVSPDIKV
IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins. {ECO:0000255|HAMAP-Rule:MF_00080}.
Q9ZD21
RF1_RICPR
Peptide chain release factor 1 (RF-1)
MSFSDNLVKILDKYENLGKKLSSGIIGDEFVKASKEYAELEDVVVKIKQYNKAKSELEEANNFRLEMALDNATLEMIDNEIHTLENLLPKLERAVRISLLPKDEADSKSAIIEVRAGSGGEEAALFAAVLFNMYQRYSEFKGWRFEILAISDTGIGGYKEASASIKGKDVFSKLKFESGVHRVQRIPETESQGRIHTSAATVAVLPEAEGIDIKIEDKDLRIDTYRASGAGGQHVNTTDSAVRITHIPTGITVALQDEKSQHKNKAKALKILRARLYEEKRRQKEQERSDSRRGQVGSGDRSERIRTYNFPQGRVSDHRINLTLYKIDEVVKHGQLDEFIEALIANDEAKKLSEL
Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
Q9ZD26
DBHL_RICPR
DNA-binding protein HU-like
MVTKNYLIDKVHDKLDYLSKQDVKESVDLILDYLNESLKEQKRIEIRNFGNFSIRKRKFPESNKFYNTVYYRMPKNLFKD
Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
Q9ZD28
RS1_RICPR
Small ribosomal subunit protein bS1 (30S ribosomal protein S1)
MSIKLKQRFVPQLAAINCQFEEDFAQMLKTVDTSHIKEKTVVKGQVIEIKNDMIIVDVGLKNEGRIPKSEFLSLPEVGDVVEVFIEKIEGRNGRTILSREKAVKEELWGQLEIMCSKGEFVDGTIFGRVKGGFTVDLSGVVAFLPGSQVDVRPIKDPTSIMNIKQPFKILSMDKKLGNIVVSRRVILEESRSEARDEMLSKIKEGIVLEGVVKNITDYGAFIDLGSVDGLLHLTDISWGRVNHPSEVLEFNQKVKVMVIKFDEKTKRISLGIKQLDSNPWDAIKEEFPVGKKMTGKVTNFADYGVFLELKDGLEGLVHSSEISWLKSNQNPRKMLTIGQEVEFIVLEVDTEKHRVSLSIKQCQENPLIKFAENNPIGTIIKAPIRNITDFGIFVVLGNNMDGMIHEGDISWEDNGTDLLKSYKKGDEIECKVLAINFEKEQVSLGIKQLLPNPYQKISDEYKKSTIVKAVVTEIKDDGLVVLLNNKVTGFIKRVELSDEKDEQKPEMFKVHEEIDAKVVSIEKSTGRVLLSIKAHKIAERQKTLKEYGSSDNTTNMGDILANVLEEKK
Binds mRNA thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence (By similarity).
Q9ZD29
CLPP_RICPR
ATP-dependent Clp protease proteolytic subunit (EC 3.4.21.92) (Endopeptidase Clp)
MSYVPVVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDIYMYINSPGGVVTAGLAIYDTMQFIKPKVATLCIGQACSMGSLLLCGGEHGMRYSLPHSRIMIHQPSGGYKGQATDIEIHARETLKIKRLLNELYSKHTKQELKYIEKSMERDNFMSSEEAKKFGLVDNIISSRDTIAFLAQ
Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. {ECO:0000255|HAMAP-Rule:MF_00444}.
Q9ZD44
RS15_RICPR
Small ribosomal subunit protein uS15 (30S ribosomal protein S15)
MSITTERKQQLIKEYAITENDTGSTAVQCAILTERINNLTEHFKSNHKDHTSRRGLLILVGRRRRLLNYIKKNNVSEYLDLISKLGIRKIK
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. {ECO:0000255|HAMAP-Rule:MF_01343}. Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. {ECO:0000255|HAMAP-Rule:MF_01343}.
Q9ZD47
TLCD_RICPR
ADP,ATP carrier protein 4 (ADP/ATP translocase 4)
MTINASNIENSFSKINSHFSKLTDYIWPIKRHEISKFLFITLLMFCILFIQNLIRALKDSIVTTMIGAETISFLKFWGVMPSAFLITVIYVKLVNRMKAENIFYLIISIFLTFFALFAYVIFPNHEMLHLRPVTVHNLTASLPNLKWFILLLSKWSFSLFYIIAELWPNVVFALLFWQFVNNITTVEESKRFYPLFGLLSQTGIYLAGHFLENLSNINYYVTNKFALQSSFHTLSIQIILTIVLILGIVSIKTFWLLNHKVLDKKHMALLRFKTKNKSITIAKSFQMILSSRHIRLIATLLICYGIAINLVEGPWKAAATKIYKTPTEYAAFIGSYLSYTGVFTIFFVLLGSNIVRRMGWFTSAVITPSIVFITGILFFAVNNFEGFAGLIIANFILTDPALVAITIGAIQNVLSKSSKYTLFDSTKEMAYVPLEPEIKISGKAAADVIGTKLGKSGSAFLQSLIFIILPSASYQSISICLMIIFILTCVTWIWATKELNKEYKNSIKFSQK
Provides the rickettsial cell with host ATP in exchange for rickettsial ADP. This is an obligate exchange system. This energy acquiring activity is an important component of rickettsial parasitism (By similarity).
Q9ZD61
ISCU_RICPR
Iron-sulfur cluster assembly scaffold protein IscU (Sulfur acceptor protein IscU)
MAYSKKVIDHYENPRNVGSLDKKKKNVGTGLVGAPACGDVMKLQIEVGDDEIITDAKFKTFGCGSAIASSSLVTEWIKGKSVEDAKEIKNTEIAKELSLPPVKLHCSLLAEDAIKAAIADYKQKRENKKDS
A scaffold on which IscS assembles Fe-S clusters. Subsequently gives the nascent cluster to other proteins. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (By similarity).
Q9ZD67
TLCC_RICPR
ADP,ATP carrier protein 3 (ADP/ATP translocase 3)
MLPPKIFFEKVKEIIWPIERKELKLFIPMALMMLCILFNFGALRSIKDSLVVPSMGAEIISFLKLWLVLPSCVIFTILYVKLSNKLNFEYIFYSIVGTFLLFFLLFAYIIYPNQDIYHPNDAMINNLIASYPNLKWFIKIGSKWSYALMYIFSELWSAVVINLMFWQFANHIFDTAKAKRFYPVLGMVGNIGLIIAGSVLVFFSSGQYIIDSELLTDSYNSSSNNSIMLQPIISIIVTAGIIAMFLFRIINKFILTNSINVLDVKKVAAKTKTKLALIESIKLIIHSKYIGRIALLIICYGLLINIVEGPWKAKIKELHPNTVDYVNFMGMFNIWMGISCVTFMIIGSNILRRLGWLISALLTPIMLSITGFMFFIFIIFIEEIGTCFGDFNLLYVAIIVGAIQNILSKSSKYSLFDSTKEMAYIPLSLELRTKGKAAVEVIGTKFGKSLGAFIQSLIFIIIPTATFDSIIIYLLVIFIVMMNLWIWNIIKLNKEYIKLCQ
Provides the rickettsial cell with host ATP in exchange for rickettsial ADP. This is an obligate exchange system. This energy acquiring activity is an important component of rickettsial parasitism.
Q9ZDA4
RECR_RICPR
Recombination protein RecR
MNKTNDIDQLIYLFSKLPGLGIRSARRIVLYLLQDKDVRLKSLINHLIELDKKIVKCEICGNLDTKSICHICSSEYRDKSTIAIVETVAELCAMERSGNFKGLYHVLGHNLSAASRQNPRILRLPELLKRCFVENIKEVIIATNSTLEGQTTAYFIIEYLKEHPAKISRLASGIPIGGELDYLDEGTLSAAISLRQPCE
May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. {ECO:0000255|HAMAP-Rule:MF_00017}.
Q9ZDA7
ISPT_RICPR
Isoprenyl transferase (EC 2.5.1.-)
MTTIKHLAIIMDGNARWADRHNLTKSEGHKAGADKIRELLPEFINLNIPYITLYTFSFENWQRSSSEVDFLIKLLSIYLKNELDSLHENGVKIKVIGRLNLLRSSLQKQINNAIELTKNNNKIKLCIAFSYGSRQEIVDACTKIIAHGKKQVSEYDIQHALYDPEMPDVDLLIRSGGVYRISNFLLWQAAYAELYFSQKYWPDFNKDDIHEAINDYSKRKRTFGKR
Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. {ECO:0000255|HAMAP-Rule:MF_01139}.
Q9ZDB3
DPO3B_RICPR
Beta sliding clamp (Beta clamp) (Sliding clamp) (Beta-clamp processivity factor) (DNA polymerase III beta sliding clamp subunit) (DNA polymerase III subunit beta)
MLKLIVETKTLMQSLGFARSIIEKRNVIPEYANIKLSAQDGNLELSSTNMDLYLSQKIAVQVLNEGEITVATQTLSDIVRKFPDSELTLTEIEITQLEIKGQNCKFNLFTLPVSSFPAMDSIKPEVSFKISCADFAKIIESTKFSISLDETRYNLNGIYLHIKDKEFFAASTDGYRLSISWITLEEKIKNFGVILPQKSAEEILKIVKDPKNIHEDIEILLSSNKIKFICNENTILLSKLIDGTFPDYSAFIPKSSVSKLVINRKIFADSIERIAIITVEKFRAVKLSLSRKILEISAVGEARGTAKEIITASQDKESFYEYNHDESLVIGFNPQYLEDVLKAIKSDIVELYFSDISASAPVLIKFPRNPKDIFVIMPVKV
Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of replication as well as for processivity of DNA replication.
Q9ZDD9
YCIB_RICPR
Inner membrane-spanning protein YciB
MLKLLSEIGPVIAFFAGFFYGGGIQNATLYMLITSIICITLCYIIDKKVSKLSIISSTVLFISGIITLISGDSMYIKIKPTILYVIFGIIFLMSGIKKNPFIKYALESIVRLKEESWIILSYRTAAFFFFMAVVNEVVWRNFSDETWVKFKVFGVIPITFIFILLQLPLLLKNKLPDSKI
Plays a role in cell envelope biogenesis, maintenance of cell envelope integrity and membrane homeostasis. {ECO:0000255|HAMAP-Rule:MF_00189}.
Q9ZDE1
RLPA_RICPR
Endolytic peptidoglycan transglycosylase RlpA (EC 4.2.2.-)
MIIMRNYKFKLEPLKQCQEAFKRYTVHSTALYIIALQANWSRRLIYKLSLYFCKIKNCYTTFKFEQSNRFIITKAERIIKIQHLIRFKDIVNNFISLINILLVLIFCINLSGCNASKKLSYSNKYSYKELSKDDPHNLTYIGHYKVGKNYKIKGKIYKPHTPKYFTETGYASWYGGRKDGFHGKTTANGDRFNRNLLTAAHKTLPLPCLVKVTNKVNNKSVILMVNDRGPFKKNRIIDVSQKAAEILAFKNQGVTKVRIEYLPNETEKFLKKINLKKPENKTFAKNHKKSLFTQITKNNQCSINCHIKLVNLKYKLAVNP
Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. {ECO:0000255|HAMAP-Rule:MF_02071}.
Q9ZDE6
RUVA_RICPR
Holliday junction branch migration complex subunit RuvA
MIGKLNGKIDSHCDDYVIIDVNGVGYLVYASGKTLAKLVEGKFYKLFIETHVREEHIHLYGFLTLEEKNFFNLLQSVNGIGTKMALSILSNLTPTDIQIAINNDDRNIFKAISGVGAKLAERIMLELKDKITKIFSSSAIIKDSNISSIAINEVMKALVNLGFTRFEAQNTVQGIITQNPKISIDELIKTALKNRNSSF
The RuvA-RuvB-RuvC complex processes Holliday junction (HJ) DNA during genetic recombination and DNA repair, while the RuvA-RuvB complex plays an important role in the rescue of blocked DNA replication forks via replication fork reversal (RFR). RuvA specifically binds to HJ cruciform DNA, conferring on it an open structure. The RuvB hexamer acts as an ATP-dependent pump, pulling dsDNA into and through the RuvAB complex. HJ branch migration allows RuvC to scan DNA until it finds its consensus sequence, where it cleaves and resolves the cruciform DNA. {ECO:0000255|HAMAP-Rule:MF_00031}.
Q9ZDE7
SYP_RICPR
Proline--tRNA ligase (EC 6.1.1.15) (Prolyl-tRNA synthetase) (ProRS)
MLLSKYFLPILKEEPSEAKVISHKLMLRSGMIMKQAAGLYTWLPLGLKVLKNIENVVRSNMNKVGALEVLMPCIQPAHLWIESGRFEHYGKEMLKFQDRHDNTLLFGPTNEDMITDIFRRNIKSYKDLPKNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDINQKNAVNTYNKMYKAYMNTFRDLGVFAIPVIADNGPIGGNLSHEFHIVAETGESTIYYDKRFKILKDNPDIDVEEIKGWYAAAEEKHDVNKLSSFPEGITRSKGIEVGHIFYIGSKYSVNMNALINDEYGKLIPVEMSSYGIGISRLAAAIIEANCDKKGIIWPCSVAPFKVSLINLNIHDNKCVELAAKTDKELSHQNIEVLYDDTDARPGSKFATHDLIGSPYQIIIGPKKAANNIVELKDRKTGVLEDIEVENIINYIKNIDSI
Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). {ECO:0000255|HAMAP-Rule:MF_01570}.
Q9ZDF0
KDSB_RICPR
3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) (CMP-2-keto-3-deoxyoctulosonic acid synthase) (CKS) (CMP-KDO synthase)
MKNQDVAIIIPSRLNSTRLIQKPLQLIGSITLIERVFQQVNKANIHHTYVATDSEEIANVIKKISGKVIFTDSNIPTGTDRAYEAFKLIPNNHNIHYIINVQGDIPFIEHRSILKIIEYLKNSEYDIVTPVVKVDRESIEDSSNVTVAVDYTGKALYFSRSPIPHGAEEFLYHLGIYGFRKNALEKFVSLKQTFLEKTERLEQLRILENGMTIGTCLVENVPISVDTEEDLKKAIKFCKKINKLGL
Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. {ECO:0000255|HAMAP-Rule:MF_00057}.
Q9ZDF2
TLCB_RICPR
ADP,ATP carrier protein 2 (ADP/ATP translocase 2)
MNIVDSNCTIWHKARNSKFRHIVWPIRSYELTKFIPMTLLMFFILLNQNLVRSIKDSFVVTLISSEVLSFIKLWGEMPMGVLFVILYSKLCNIMTTEQVFRIITSTFLFFFAIFGFILFPYKEFFHPNPELINQYIIVLPHLKWFLIIWGQWSLVLFYIMGELWPVIVFTLLYWQLANKITKVEEAPRFYSFFTLFGQTNLLFSGTVIIYFAKSEHFLLPLFAHLNDTNEILLKSFITVILISGLICLALHKLIDKSVVEADKNIKFKNQRTDILKLSLLESAKIILTSRYLGFICLLVMSYSMSINLIEGLWMSKVKQLYPATKDFISYHGEVLFWTGVLTLVSAFLGSSLIRIYGWFWGAIITPIMMFVAGVMFFSFTIFEQHLGNIVNTLGYSSPLVIIVFIGGLWHVFAKSVKYSLFDATKEMVYIPLDNEIKTKGKAAVDVMGAKIGKSIGAIIQFISFSIFPNAVHNDIAGLLMVTFIIVCILWLYGVKVLSQNYNKMIKR
Provides the rickettsial cell with host ATP in exchange for rickettsial ADP. This is an obligate exchange system. This energy acquiring activity is an important component of rickettsial parasitism.
Q9ZDF3
MDH_RICPR
Malate dehydrogenase (EC 1.1.1.37)
MKKNPKISLIGSGNIGGTLAHLISLKKLGDIVLFDVSEGLPQGKALDLMQAATIEGSDIKIKGTNDYRDIEGSDAVIITAGLPRKPGMSRDDLISVNTKIMKDVAQNIKKYAQNAFVIVITNPLDIMVYVMLKESGLPHNKVIGMAGVLDSSRFNLFLAKEFKVSVKNVNSIVLGGHGDTMVPLLRYSTISGVPIPDLIKMGLSSNKNIEKIIDRTKNGGGEIVKLLKTGSAYYAPAASAIAMLESYLKDKRQILTCAAYLQGEYDIHDLYIGVPIIIGKEGVIKVIELQLTEEEKILFYKSVTEVKKLIDTIQ
Catalyzes the reversible oxidation of malate to oxaloacetate. {ECO:0000255|HAMAP-Rule:MF_00487}.
Q9ZDH3
NUOC_RICPR
NADH-quinone oxidoreductase subunit C (EC 7.1.1.-) (NADH dehydrogenase I subunit C) (NDH-1 subunit C)
MTLDKLIEKLAAKFRIVITKVAVKDHLAYKIEPHFLLPFLKALKESEELRFTVLTDLFGVDFPKKEKRFEVVYNLLSLKLNKNLIIKTHISEKESIPSAMQILSAAYWYELEVYDMYGVNFNGNNDKRRILTDYDFEGHPLRKDFPLTGYTQVKYDKKLEKVTYEPVNLDIEYREFDFSSHWHSPSYVLPGDEKTEE
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. {ECO:0000255|HAMAP-Rule:MF_01357}.
Q9ZDH4
NUOD_RICPR
NADH-quinone oxidoreductase subunit D (EC 7.1.1.-) (NADH dehydrogenase I subunit D) (NDH-1 subunit D)
MTNKTITLNLGPQHPATHGVLRLILEMDGEVVNNADPHIGLLHRGTEKLIEHKTYLQAIPYFDRLDYVSPMCQEHAFALAVESLLECSVPRRAQFIRVLFSELTRILNHTLNIGSQALDIGATTPLLWLFEEREKIMEFYERVSGSRMHSNYFRPGGVAEDLPENLLEDINKFIEQFPSKLNDIENLLNENRLWKQRLVDIGVVSQKDAMDWGFSGPMLRGSGIAWDLRKSNPYDVYDEMDFEVPIGKNGDCYDRYLVRILEMYESIKIIKQCIVKMPKGQVKTDDPKLTPPTRGKMKESMEAMIHHFKLYTEGYDVPIGETYKAVEAPKGEFGVYLYSQGGNKPYRCRIKAPGFAHLQGLNFMSKGHLIADVITIIATLDIVFGEIDR
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. {ECO:0000255|HAMAP-Rule:MF_01358}.
Q9ZDH5
NUOE_RICPR
NADH-quinone oxidoreductase subunit E (EC 7.1.1.-) (NADH dehydrogenase I subunit E) (NDH-1 subunit E)
MNTKITNFTFAFDKKNLNLAETIIKKYPPEGKRSAILPLLDLAQRQNGGWLHVSAIEYVANMLEMPYMRAYEVATFYTMFNLNPIGKYHIQVCTTTPCWLRGSDNIMKICEKKLAIKHKETTKDQKFTLSEIECLGACVNAPVVQINDDYYEDLNEAKMEKLIEQYLNEFKSKMQNG
NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity).
Q9ZDH8
EX7S_RICPR
Exodeoxyribonuclease 7 small subunit (EC 3.1.11.6) (Exodeoxyribonuclease VII small subunit) (Exonuclease VII small subunit)
MTNTKTLKDNISFEEALRELEEIVKKIDTGQENLETAVNSFERGILLKNHCEKKLKEARLKIEKITKLADSTVILEETEV
Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides. {ECO:0000255|HAMAP-Rule:MF_00337}.
Q9ZDI0
RIMM_RICPR
Ribosome maturation factor RimM
MNSLKNLILIGVIKSCHGIQGHVILKSFTEPSTKILERTLVNESGANIRIKLISQNAKGELICTFNDIATRNEAENLKGYKIFCLRTSLPKLEEDEFYIADLNHLQILDQSNKEIGKIKNILNFGAGDIIEIEFLDKTTELLPFNKEFFPIITKDYVILNYQTKV
An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes. {ECO:0000255|HAMAP-Rule:MF_00014}.
Q9ZDI3
RS4_RICPR
Small ribosomal subunit protein uS4 (30S ribosomal protein S4)
MTKIVRSKYKASRRLGVSLWGDSKDAFNTRNYRPGQHGQNTMIKTSDYGLHLKAKQRLKCYYGRVTEKQFRNIFALAQRMKGNTGENFIGLLESRLDTVVYRMNIAPTIFAARQLVSHGHIKLNGKKADIASIRLKEGDIIEIKESIQQIPLIQESISKQGQTTPGYLSFDIPSLTGKYLRVPALSDVPYPFEAEVHLVIELYSR
One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. {ECO:0000255|HAMAP-Rule:MF_01306}. With S5 and S12 plays an important role in translational accuracy. {ECO:0000255|HAMAP-Rule:MF_01306}.
Q9ZDJ5
CAPD_RICPR
UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase)
MFVDKTLMITGGTGSFGNAVLSRFLKSNIINDIKEIRIFSRDEKKQEDMRIALNNSKLKFYIGDVRNYQSIDDAMHGVDYVFHAAALKQVPTCEFYPMEAINTNVLGAENVLSAAINNKVTKVIVLSTDKAVYPINAMGLSKALMEKLAIAKARMRSPGETILCVTRYGNVMASRGSVIPLFIHQIKQGKELTITEPSMTRFLMSLVDSVDLVLYAFEHGRQGDIFVQKSPASTIEVLAKALQEIFGSKNAIRFIGTRHGEKHYESLVSSEDMAKADDLGGYYRIPMDGRDLNYAKYFVTGEKKVALLDDYTSHNTKRLNLKEVKELLLTLDYVQKELKNA
Epimerizes UDP-galactose to UDP-glucose. May contribute to formation of LPS or the exopolysaccharide slime layer by providing UDP-galactose as a substrate for either molecule.
Q9ZDJ8
YQGF_RICPR
Putative pre-16S rRNA nuclease (EC 3.1.-.-)
MIIKNLQEFYRLLIPNKPLIAIDYGSKKIGVALSDQELSIAMPFNTITAVNKKVVITSLLNIIKKYKVCGIVIGLPIDMSGGVTQQTNIVMKFAEKLKQSLGLPIYLQDERLTTKSANNFLKSFGIKRKDRNHNDDAVAASMILEIVLNAIKRFNL
Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA. {ECO:0000255|HAMAP-Rule:MF_00651}.
Q9ZDK4
BIOY_RICPR
Probable biotin transporter BioY
MRYIMNSLFKILYLNRFVEYLSTNTYILDIVKIVMGVIAIFASSQITIPIKPVAITMHSVILCIIAFTYSPRLSFLTILTFIFIGVMGLPVFCQFSSGINYFLGSAGGYYLGFLIGMPVMSVLKGKLAENYLNVTIICIIGHAIFYLCGIIWLASMIGLKQAIYSGFIIFIPSGLVKILIFSCLFSYIKNLKRK
Probable biotin transporter.
Q9ZDK5
CYAY_RICPR
Iron-sulfur cluster assembly protein CyaY
MNNTAFSKLAETTIVYIVDKIEEQDLEGIIDVDLQGDILNLDTENGIYVINTQSASKEIWLSSPVSGPHHFFYEQGKWKSRIGFELMVLLTEELGIRFDKYEIF
Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis. {ECO:0000255|HAMAP-Rule:MF_00142}.
Q9ZDK7
LPXB_RICPR
Lipid-A-disaccharide synthase (EC 2.4.1.182)
MKKIYFIAGEMSGDFIGGHVIQNLKSNEGLEFTGIGGKYMEEAGNFKSLFTITAINLIGFIEIIPHLLKIKKLIDKTVEHIINSKADLLITIDSPGFTYRVAKRVRKLLPNLKMIHIVAPSVWAYKADRAVNYAKIYDCLFALLPFEPPYFTKVGLDCRYIGHPIMEQEFYRDKIALRKELKIDENERILCVTLGTRKGEILRHLPIFIDAIQEISKDYKNLTIIFPLAHPDHEAIIKPFLDNIQFNYLFLSNERLKAYAVSDLALAKSGTNTLEISASGTPMVVAYKVNIISFIIIMLLIKIKYVSLINIIAGSEIIPEFIQFNCKANLISNKLKELLSNSQKRYNQVVKSKKILQKLGFESNRSPSYIAAKIIKQEFL
Condensation of UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
Q9ZDM3
COXZ_RICPR
Cytochrome c oxidase assembly protein CtaG
MSKKSNKNLAFSLLGLMMSMVLLSFASVPIYNLFCKVTGYGGTTIKETVSVYSKVKGTKAIIIEFDANVDPNLPWHFIPRQKRVQIVPGQNTLVFYEAENLSNKDIIGTSIYNVTPNKAGKYFVKIHCFCFEEQLLKAREKVLMPVTFYIDNDFERDPEMENIKVITLSYSFFKIREL
Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I.
Q9ZDM5
TOLB_RICPR
Tol-Pal system protein TolB
MRNIVYFILTLFSLTSYALETINIEHGRVDPTPIAVNKFNADSSNNDLVGRDVVKVISNDLKISGLFRPISSASFIEEQTGIKYKPLFAAWRQINASLLVNGEVKTLENGKLKISFILWDTFLEKQLTGALFEVPTKLWRRAAHKIADKIYEKITGDPGYFDTKIVYVSESTVLPKIKRIALMDYDGANNKYLTNGKSLVLTPRFAHSADKIFYVSYATKSRALVYEKDLKTGKESVVGDFVGISFAPRFSPDGKKAVMSIAKNGSTHIYEIDLATKQLNKLTNGFGINTSPSYSPDGKKIVFNSDKNGVPQLYIMNSDGSDVQRISFGVGSYASPSWSPRGDYIAFTKIIRQDGEKTFNIGIMKAYPQDHGNSERIITSGYLVDSPCWSPNGRVIMFSKGWPSKANAPGKNKIFTIDLTGHNEREIITPADASDPEWSGILN
Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. {ECO:0000255|HAMAP-Rule:MF_00671}.
Q9ZDM9
MUTS_RICPR
DNA mismatch repair protein MutS
MTLCNMNLHEFRQKYNYNVATKMMQQYLDIKFAHLDCLLLFRMGDFYELFYEDAILASNILGIALTKRGKNCEEEIPMCGVPYHALEHYLTKLIEENYKVAICDQLETPEEAKKRDGYKAVVTRDVTRIITPGTIIEENLISVTEPNYLTSLVIPKNKKTASICCVDLSTSKIFVINVPETEILNELARLKSREILLSENLKSSNISDSILKQFNCRITYQVDSFFAINKCEKIILDFYKIRDIKGIGEISNSQICAIGSILEYLSLTQKQNIPHLPIPKIINFHNYMTIDFSTRRNLEIVTNLQGNLYGSVLNTLNHTVTTQGGRLLYHFLSSPLTNIAKINHRLNITEFFYSNLGIVTRIRELLKNTSDIERCLTRITMNRSSGRDLLSIKYTLETAKTIKGLFSESYGLNLPHFIEKIIKPLSGDAELYNLIHMSIREDAPNNLNDGGIIKYEFHPKIAQLNDLINNKKLHVEKLKDQYRKETRIESLKISHNNVLGFFIDITPKNVNKILDPKFIHRQTTINSVRYTTYELQNLENELVNAQTLVIRLEKELYTDICRKVIEKSSYLKILANSLSGLDVFCNFAYIADEYDYTKPEFTNDLSFDIVKGRHPVVEAALRKTSKSFVYNDCHLSEAERIWLITGPNMAGKSTYLRQNAIITIIAQIGSFVPAKSAKIGVVDKIFSRIGAADDLIKGQSTFMAEMLETSAILAQSTKNSLIILDEVGRGTSTYDGVSIAWSVLEYIHDKLQCRCLFATHYHELTVMKNFLPALQNYTIAIEESGKDILFLHNIILGASNKSYGLHVAALAGLPTSVINRAAQILLKFEKISISKEKNILSNASNNLSLFNFEHEKPISNSKLDEEFKTIDPDKISPKEALELIYKFKKLV
This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity (By similarity).
Q9ZDQ2
RF2_RICPR
Peptide chain release factor 2 (RF-2)
MRAEIENYIKKIEQSLDLIWRSLDIEALTVRLTELEELTADPNLWNNNANAQTLLREKNNLEEKLNVFNKLKSNLKEILELEAMAEVENDLETLNQIEQDFKKLSIITAKFETECLFSGETDCNNCFLEINAGAGGTESHDWASIMMRMYLRFAERLGFKTKIINMINGEEVGIKSCTIRIIGKRAYGWFKTESGVHRLVRISPFNAAGKRMTSFASSWIYPEIDDDIAITIEDKDLRIDTFRSSGAGGQHVNTTDSAVRITHIPTNTVTQCQSDRSQHKNKAQAMKMLQAKLYKLEMQKRNENVDKQNANKTDNSWGHQIRSYVLQPYQIVKDLRTNYETSDTKGVLDGNLEDFVSASLSMNNSGNKT
Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.
Q9ZDR3
ODPB_RICPR
Pyruvate dehydrogenase E1 component subunit beta (EC 1.2.4.1)
MQITVREALRDAMQEEMLRDEKVFVIGEEVAEYQGAYKVTQGLLEQFGSKRVIDTPITEYGFAGLAVGAAFAGLRPIVEFMTFNFAMQAFDHIVNSAAKTHYMSGGQVKCPIVFRGPNGAASRVAAQHSQNYTACYSHIPGLKVVAPYSAEDHKGLMLTAIRDDNPVIFLENEILYGHSFDVPDIIEPIPFSKAKILKEGSNVTIVTFSIQVKLALDVVNILQNDNIDCELIDLRTIKPLDTDSIIESVKKTNRLVIVEEGWFFAGVGASIASIVMKEAFDYLDAPIEIVSGKDVPLPYAVNLEKLAMPSANDLIEAVKKVCYYSI
The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity).
Q9ZDR4
ODPA_RICPR
Pyruvate dehydrogenase E1 component subunit alpha (EC 1.2.4.1)
MDIKPEKYKPIKEEYIKSFKDMLLLRRFEEKCGQLYGMGKIGGFCHLYIGQEAVISAVAMIKKKGDSTITSYRDHAHIILAGTEPKYVLAELMGRATGCSKGKGGSMHLFDIPNKFYGGHGIVGAQVPIGTGLAFAEKYNGTNNICFTFLGDGAVNQGQVYEAFNMASLWGLPIVYIIENNEYSMGTSVARSTFMCDLYKKGESFGIRGFQLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSMSDPAKYRSKEEVEKYKERDTLVRIREIILDNKYATEADLKAIEQSVREIIKVAVEFSENSPLPAEDELYTEIYV
The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity).
Q9ZDS2
CYCM_RICPR
Cytochrome c homolog
MTGKELNKIVAAILFASLIAMIVGFIANILYKPNLHVLHRGYSIAIQKSSSNESATVIAQESVNIQELMKTANANHGREIAKKCLMCHSLDKDGPNKLGPHLWNIVGRPKASITDYKYSFAISKLGGVWDDENLFAFLHKPSSYAPGTKMSFAGISKPQDIADVILFLKNYVHDQ
May be involved in electron transfer from bc1 complex to aa3.
Q9ZDS5
FTSQ_RICPR
Cell division protein FtsQ
MRQKTISNKNKQTKNTNNISLRRKLGLMYKKAILVLKIVLMIFVCLFVFTKYFTSIKTYLITNIYQVTTKLGFRLENVIIEGQQNVDELTILKVLNANKSSPIFSLKLDEISNNLKKSKWIKEVYVSRRLPNTVYIKLFEREPIAIWQINNQLFLIDEEGYKISKDIQPFSHLLHVVGEGANIYASKLVLELQKYPALLNKTLVAIRVGDRRWDLNLKGNISIKLPEKEFETALKYIDALNKTNKLFNQNYKALDLRDRNKYYIQKY
Essential cell division protein. {ECO:0000255|HAMAP-Rule:MF_00911}.
Q9ZDT7
EFP_RICPR
Elongation factor P (EF-P)
MKISANSIRTGNILVYNNDLWVVSKTPEHTQPGKGGAYVQVEMKNLKTGTKRNDRFSSSDYLEKAELEQKDCQFLYFEGNNLVLMDTKHFDQINVPKEILEAKLPFLTENMIVKVEFYNDKPLTIVLPPTVILAISETDPVIKGATVTSSYKPAILENGIKVKVPQYLAIGEKIVVKTDDMTYVERAK
Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase (By similarity).
Q9ZDU1
RL13_RICPR
Large ribosomal subunit protein uL13 (50S ribosomal protein L13)
MKTYSAKPSEIEKKWWVIDAKNVVLGRLASRVAIMLRGKHKPSFTPHLDCGDNIIIINAEHIKLTGKKLNPKDGKVYYRHTGFPGGIKDTTAGKILSGKYPERVIKMAVKRMITRNVLGAKQMSNLYVYANCEHPHMAQQPTIYDFASENPKNKK
This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. {ECO:0000255|HAMAP-Rule:MF_01366}.
Q9ZDV6
QUEA_RICPR
S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) (Queuosine biosynthesis protein QueA)
MKLSDFDFNLPSALIAQYPSSERDNSDLLIAGTKHIKTKFYNIIDYLKKGDLLVFNNSKVIKAKLHLGKNITINLNKKLSDNCWIAFAKPARKLNIGDEFYFDTHKIIITEKLAIGEIKVKFMLDNISIIKFLDKYGEIPLPFYIKRPSPVCYSNMALCCKPENTLKIKSIPHNMSKIVTNNSNTVNLRSNDGIIDSTNDNDRYQTIYSQIEGSVAAPTAGLHFTKNILDKLKTKGVHTAFVTLHVGAGTFLPVKTENIHEHKMHTEYCSITTETAEIINKTKQEGRSIIAVGTTTLRTIESACNNGIVRAGNFETDIFITPGFNFQVVDMLLTNFHFPKSTLFILICAFAGFKEMHALYKYAIKEKMRFFSYGDATLLYRKV
Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA). {ECO:0000255|HAMAP-Rule:MF_00113}.
Q9ZDV8
DEF_RICPR
Peptide deformylase (PDF) (EC 3.5.1.88) (Polypeptide deformylase)
MSIFSIVTAPDERLKQKSKPVLECTDQTRKFMHDMLETMYNADGAGLAAVQVGILLRILVIDIKEYDPVERPKDFYPLFIVNPEIIEKSTELVTANEGCISLPKQRIEVTRPESVKIRYLDYHGKSQELKANDWLARVIQHEYDHLEGKLMVDYLSNLKRDVVLRKLKKLKNNIV
Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (By similarity).
Q9ZDW1
GLRX1_RICPR
Glutaredoxin 1
MNKSILHTIIIYTLASCPYCIKAKALLDKKNVIYEEIEVSNLTQEEKEKFIKKSGGKSTVPQIFIDNMHVGGCDDLFNLEKEGRLDKLLEHQPKN
Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity).
Q9ZDW4
HSCB_RICPR
Co-chaperone protein HscB homolog
MQNYFQLLELPQEYNIDLKILEKQYFAMQVKYHPDTAKTAQEKAQNLITSTELNKAYSTLKDALKRAEYMLLLQNINLNDEKIRSLLSPLELSIFWDEMERIENTTLFSDLEKLKNKYELMQQQNINSLKQAFVEQNLSDATIYTSKLKYIRTLQSKLQEKIKSCK
Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA. {ECO:0000255|HAMAP-Rule:MF_00682}.
Q9ZDW5
HSCA_RICPR
Chaperone protein HscA homolog
MQIIEITEPKQTDFQQKLQIAVGIDFGTTNSLIAIATNRKVKIIKSIGDKELIPTTIDFINEDLIIGNNKGLHSIKRLFGKTLKEILNTTTLFSLVKDYLDINSSELKLNFANKKMRIAEIAAEVFIYLKNQAEKQLKNNITKAVITVPAHFNDAARGEIMLAAKIAGFEVLRLIAEPTAAAYAYGLNKNQTGRYLVYDLGGGTFDVSILNIQEGIFQVIATNGDNMLGGDDIDVVITQYLCNKFDLPHSIETLQLAKKAKEILTYKESFNNDIISINKQTLEQLISPLVERTINITQECLEQSGNPNIDGVILVGGTTRIPLIKDELYKAFKIDILSDIDPDKAVVCGAALQAENLITQHTNSLLIDVVPLSLGIELYGGIVEKIITRNTPIPIAVIKEFTTYADNQTGIQFHILQGEREMAADCRSLARFELKGLPPMKAGNIRVEVTFAIDADGILSVSAYEKISNISHNIEIKPNHGINKTEIETMLKNAYKNAKIDYTTRLLQEAVIETEALMSSIERSIIKLTKLLSESEISIINALLDNIKDAVQTRDQILIKNSIKEFKSKIKKYLDTKLNINDLRKCKNSNQIK
Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB (By similarity).
Q9ZDW6
FER2_RICPR
2Fe-2S ferredoxin (Adrenodoxin-like protein)
MLRKIKVTFIINDEEERTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVMLEEEFYNKLKKPTEAEEDMLDLAFGLTDTSRLGCQIILTEELDGIKVRLPSATRNIKL
Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.
Q9ZDX9
DNAK_RICPR
Chaperone protein DnaK (HSP70) (Heat shock 70 kDa protein) (Heat shock protein 70)
MGKVIGIDLGTTNSCVAVMEGKEPKVIDNAEGERTTPSIIAFANSERLVGQPAKRQAVTNPRNTIYAVKRLIGRNFTDPMVRKDQGLVPYNIVKADNGDAWVEADNHKYSPSQISAFILQKMKETAENYLGEKVTQAVITVPAYFNDAQRQATKDAGKIAGLEVLRIINEPTAAALAYGFEKSSSKTIAVYDLGGGTFDVSILEISDGVFEVKSTNGDTFLGGEDFDTRILNHLIEVFKKESGIDLSKDPLALQRLKEAAEKAKKELSSTSTTDINLPYITADSTGPKHLNIKFTRAELEKLVDDLIEKTIEPCRQALKDAGFKPNDIQEVVLVGGMTRMPKVQEAVKKFFGREPHKGVNPDEVVALGAAIQGGVLNKEVTDILLLDVTPLSLGIETLGGVFTRLIDRNTTIPSKKSQVFSTADDNQHAVTIRVFQGEREMAKDNKLLGQFNLEGIPPAPRGVPQIEVTFDIDANGIVHVSAKDKASGKEQKVTIQASGGLSDAEIEQMVKDAEHNADEDKKRKELIETKNAADSLVYSTEKTLREYGDKLSSEEKGTVEEALTSLKAALESEDASLIKEKTGNLTAANMKIGEAMYKTQTENQHSEANTVNNEKVVDADFQDVDKK
Acts as a chaperone.
Q9ZDY1
BAMD_RICPR
Outer membrane protein assembly factor BamD
MKLTKLLSALLVIGLVLGGCKSKKDSNDIVAPIATLYNEGIILLDKKKYKKAAEEFGKIFYQHPGNEMTPQAELMQAYSLFLAAQYEEAVDILNMFINLHPANIDIAYAYYLKALSYYMLISDVNHDQSRTFLSKDSFEDVITKFPNTKYAIDSSLKIDLVNDHLAGKEMMIGRFYLKKKNPMAAINRFEEVIDNYQTTYHSVEALYRLVESYMMLGLHDEAKKYTSVLGYNYPNSKWYSYAYRLVKNYQN
Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. {ECO:0000255|HAMAP-Rule:MF_00922}.
Q9ZDY2
RECN_RICPR
DNA repair protein RecN (Recombination protein N)
MFYSLSVKNFILIDELEIEFSKGLCVITGETGAGKSILLDAILFCLGYKTSNNIIKHGKDYTVVNIIFSLNEKIKKFLIQNFIEPEELLLVKCLQKAEGRKSFFINNQIVTKTLIKQLANYLFELHGQNNNITLLEASTQRDILDSYGDLLEFRVKLAKCYQIWQNTRKEIEEITVKQNVIEQEIDYLNFVTEELTKLNIQIGEEETLTNIRQDLQNKNKDLQLIRDIIAQINNPEINISINRAEKLLARQRDNDRFKAIATSLEEAYNNLEVARQELSNLLDSFTYEEYNLEETEERLFLIKAISRKYNVPANELGIFLDKSLEKLVILKNKIANSHKLQAQEVLLQEQYYKLANDLSARRLIAAKHLEESLNQELKQLKMEKANFKIEIKTAIDPTASGNDDIVFKASTNPGMKAEEINKIASGGELSRFMLALKTSLFDKMIKPSIIFDEIDVGIGGEAADKVGDRLKKLSSVTQVIVITHQPQVAGKADLHIKIEKTQLEQETKIKVKALNLAERQRELARMISGKTITDASLKVAKELLYPVACPHDQK
May be involved in recombinational repair of damaged DNA.
Q9ZDY3
ODO1_RICPR
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) (Alpha-ketoglutarate dehydrogenase)
MEEYFNKTGYLFSGNAVFVEELYRQYLANPNSVDQTWQEFFADIKDNNVVLNKSTAKVISTNVTNKELLNNNLSSETLNNLKAKEMISAYRRNAHYLANLDPLGLEIRKTKNDLKLNIEAFGLDSSQLGENINIMDEFIGTWNCKLSELVTKLDKVYTSSIGVEFDQIENVEEKNWLYTKLETDITFTSEEKKSILNDLVEVECFEQFLHIKFPGAKRFSIEGGDASIVAMNKAIDLSMHQGVEEIVIGMAHRGRLNTLTKVVGKPYKEVIASFINGNIFPDGLNVSGDVKYHLGYSADRVRANQKIHLSLADNPSHLEAINSIVAGKVRAKQDIFVDTKRSKIKAILVHGDAAFCGQGVVAESLSMSPLTAYNVGGILHFVINNQLGFTANAADTRASRYSTEFAKIISAPILHVNGDDIEAVLKATDIAVEYRQKFSKDVVVEIICYRKYGHNEGDEPMYTQSKMYNIIKSKPTPGSIYANELVKNGIIDNNYYAKLKEKFKIRLDQEYEQAKSYKQETHFFEGYWKGISRIRGKDAITGVNKKILQDLGTKLCEIPKDFAINPKLIRLFEVRKTTLTTDQPIDWATAEQLAFAHLLCSGINIRLTGQDSARGTFSHRHSILHNQIDDTTYIPLNNLSKTQAKYEVANSNLSEYAALGFEYGYSLANPKNLVLWEAQFGDFANGAQIIFDQFISSSATKWLRMSGLVVLLPHAFEGQGPEHSSARLERFLQLAAEENMYITYPTTPASIFHLLRRQILESTRKPLIVMSPKSLLRHKYAVSKLDELGENTTFIPILDEVTKIDTNNVTKVILCSGKVYYDLFAMRTNNSNIVIIRLEQLYPFEKKLVASLLKKYNKAQAFIWCQEEPKNMGAWHYIATHLNDALKEAEINNEFKYVGREESASPAVGSLQVHNKQQEKLLMEALGDDIIKEKLY
E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2).
Q9ZDZ2
DBH_RICPR
DNA-binding protein HU
MNKTEFIAFMTEHGHNNKHAAHKTLTKADAEKALNLVIESVISAIKSKHNVNLTGFGSFEIHHRKEREGRNPKTGAKMKIDAYNQPTFRAGRKLKEACN
Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
Q9ZDZ5
RSME_RICPR
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193) (16S rRNA m3U1498 methyltransferase)
MKYNRIYINSNLAENSKLELARDYVHYVKTVLRLKIHDSLRIFNGSDGEFLAQITQIGKNNLSVVLKEQLKKAYIESALTLAVAIIKSDKLMLTINMATQLGITKIIPLITRRCQFRTVNIERLMKCVIEATEQSERLNPPIIEQAITLKDYLKKNNNLILYANEHEKVKHSILHISSLLSKDIAIIIGPEEGLLMMS
Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (By similarity).
Q9ZDZ7
RATA_RICPR
Ribosome association toxin RatA
MLSFQHTKILPYKPKKLFDLVWDIKSYPQFLPWCAAARIISENNQEVISELVIQLKGLSEKYNSRVINTITDNGIYLIDTVAISGPFEYLKSTWQFIPHSTGTELKFFINFKMTSVILDKLIGSYFTIATEKMILAFEKRAKEVIK
Toxic component of a type II toxin-antitoxin (TA) system. Binds to 50S ribosomal subunits, preventing them from associating with 30S subunits to form 70S ribosomes. Its antitoxin is unknown (By similarity).
Q9ZE01
NUSB_RICPR
Transcription antitermination protein NusB (Antitermination factor NusB)
MSTNKINKKSIARIAAVQALYQNILQNNYDMYDIMQNILACYHSNNSIDLPKNFKISLSISHFKMLVKSVFENINKLDEIIDNHLTNAKDSVHMPILLRALLRVSICELLFCSTTPAKVVINEYTDIANDLLNEHEIGFVNSILDKIAQENNKIS
Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. {ECO:0000255|HAMAP-Rule:MF_00073}.
Q9ZE08
RRF_RICPR
Ribosome-recycling factor (RRF) (Ribosome-releasing factor)
MEKDNLKKILQEKMEKAIKVLGNELKGLRTGRASINFLDSVTVEAYGSKIPLSQVASLSTPDARTINVQVWDKSMVSSVEKGITIANLGLTHATDGQLIRLPIPSLTEERRKELVKLAHKYGEETKISLRNIRRDGIEELKKLEKDNIIVKDEYHNLSEQIQKLTDEYSSKVDSAIKQKEQEIMTV
Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another. {ECO:0000255|HAMAP-Rule:MF_00040}.
Q9ZE09
GATC_RICPR
Glutamyl-tRNA(Gln) amidotransferase subunit C (Glu-ADT subunit C) (EC 6.3.5.-)
MITKEEAQKIAKLARLKFEKDIVEKFSTQLSTIMNMINILNEIDCKDIEPLTSVSNMNARMREDTVTSSDLSNKLFDNVSGNSAKLAKEVKYFITPKVVE
Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) (By similarity).
Q9ZE10
GATA_RICPR
Glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) (EC 6.3.5.7)
MTELNKLTVAESVKGLKNKDFTSKELVNAYIKQIEKYKNLNAYVTETFDLALKQAEAADQNYGQNKARTLEGIPFAVKDLFCTKGIRTTACSNILKNFIPHYESSVTQNIFDKGGVILGKTNMDEFAMGSANITSCFGNVISPWKANDDNSDLVPGGSSGGSAAAVSAFMASAALGSDTGGSVRQPASFTGLVGFKPTYGRCSRYGMVSFASSLDQAGIFTRSVLDSSIMLEAMMGFDEKDSTSINAQVPELQSAIGSSMKNMKIGVPLSLGEGGIIEHDIMKMWHDTIELLKNAGAEIVDITLPHAKYGVAVYYVIAPAEAASNLSRYDGVRYGLRVECENMTLDEMYEMTRSAGFGEEVKRRIMLGTYVLSSHCMDAYYFKAQKVRRLVANDFNNAFAKVNAILLPTAPSAAFKIGKKQNDPTIMYLNDLFTIPASLAGLPCASVPAGLSARGLPLGMQIIGKQLDEYNVLKVASTIETGVKHIKFEPAGF
Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) (By similarity).
Q9ZE11
GATB_RICPR
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (Asp/Glu-ADT subunit B) (EC 6.3.5.-)
MEYIEGNTGKWEYVIGLEIHAQISSKSKLFSGSSTLFAASPNSQVSYVDAAMPGMLPVLNKHCVYQAIKTGLVLKAKINKYSVFDRKNYFYADLPQGYQISQFYYPIVQDGMIEIPTSTGDLKTIRINRLHLEQDAGKSIHDQSPYYSLIDLNRAGIGLMEIVTEPDISSPEEAAEFVKKLRNLLRYIGSCDGDMEKGSMRCDANISVRRIGEALGTRCEIKNINSIRNIIKAIEFEAKRQVDLLESGETIIQETRLFNVDSCETKTMRLKEEALDYRYFPDPDLLPLIIPDELINELKASLPELPDQKIEKYIKKFGLSQYDAGIIVSDEAVAEYFEKAANECNPKMLTNWLITELFGQLNKASIGIRECKITPSDFAKLIKLIEHDTISGKIAKTVFEIMFETGKAPDKIVEEKRLVQISDNKILNTVIDEVIAENSKSVKCYKSGKDKLFGFFVGQVMKKTECKANPTLVNKLLKDKLDS
Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) (By similarity).
Q9ZE21
RL7_RICPR
Large ribosomal subunit protein bL12 (50S ribosomal protein L7/L12)
MADLAKIEEQLSSLTLMQAAELVKMLEEKWGVSAAAPITVASAGVAAPLAEAVTEKTEFEVVLTATGDKKVEVIKIVKDITGLGLIEAKKLVDEAPKSIKNNVKKAEAEEIKSKLEAAGAKVELK
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation. {ECO:0000255|HAMAP-Rule:MF_00368}.
Q9ZE22
RL10_RICPR
Large ribosomal subunit protein uL10 (50S ribosomal protein L10)
MLRSEKPVAVEDIVNIYKESPSVIITHYHGLTVSQVSSLREELKSKEAGFKVVKNTLAKIAAKQTGLDSITNLFAGPTAIVYSKEPVEMARLVVNFANSNDNLKIIGGIVDNHILDAYSIKELSKLPSLHELRGKIVGLLQAPATKVVGVLQATSSSIARVIHAHAIKH
Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors.
Q9ZE23
RL1_RICPR
Large ribosomal subunit protein uL1 (50S ribosomal protein L1)
MSNKDICVKISGSKKIREAREKVKSDTLYNLTNAVAQLKSASYVKFDPTLEIVMKLGIDPRHSDQIVRGVVNLPAGTGKTIRVAVICKEEREEEAKSAGADLVGSINIIDEIKAGQINFDVCIATPDMMSMISSVARILGPKGLMPNPKLGTVTLDIKNAIKNAKSGQVEYRAEKAGIIHAGLGKLSFSDQDLLKNLNAFIGAVIKAKPVGLKGNYLKAIYLSSTMGASVQIDLTSIS
Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release. {ECO:0000255|HAMAP-Rule:MF_01318}. Protein L1 is also a translational repressor protein, it controls the translation of the L11 operon by binding to its mRNA. {ECO:0000255|HAMAP-Rule:MF_01318}.
Q9ZE24
RL11_RICPR
Large ribosomal subunit protein uL11 (50S ribosomal protein L11)
MSKKAIKGYINLIIPAAGATPAPPIGPALGQRKVNIAAFCKDFNDATNGMEKGVPLPTVITVYEDSSFSFKVKTPPASYFLKKYAKITKGSSATKKEAMVGKVTIDDCREIAKLKISDLNTKNIEAATKIICGSAASMGLEVVGN
Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. {ECO:0000255|HAMAP-Rule:MF_00736}.
Q9ZE27
APBC_RICPR
Iron-sulfur cluster carrier protein
MANLHQQQIIDKIQNITFKDGTFLNEVISDIIIKGNNIGFSIDISGKNKLEAEEIRLKAINKLNNIKEVNKITIVFTQSKTIDKKAQKPKHFVENVKKIILVASGKGGVGKSTISALIAQQLSLENYRVGIVDADIYGPSIPHIFGINGIPKTVEGRIVPILAQNIQIISIGFFVKAHSAIIYRGPMASKIIYQLLSNTRWNNLDYLIIDMPPGTGDIHLSIIENYHLDGVIVVTTQQKISEIDVIRSIDLYRKLGLPILGIIENMIYMLESDHCGYLSKKYHIPLIAQIPIMPQIANACDKSLPLTNLLTLPLEKYL
Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP. {ECO:0000255|HAMAP-Rule:MF_02040}.
Q9ZE34
SECF_RICPR
Protein translocase subunit SecF
MQIYPLRFVPNKIDFDFMNFKKVSYSFSIILSLISLIWISIYKFNFGIDFVGGIVIEVRLDQAPDLPKMRAVLSALEIGEVVLQNFGSERDLSIRFGSSSEENLMKNIDIIKTSLRNNFPYNFEYRKVDFVGPQVGRQLIEAGAMAMLFSFLAIMVYIGVRFEWYFGFGILIALVHDVILALGFMSMTKLDFNLSTIAAVLTIIGYSVNDSVVIYDRIRENLRKYHKKNITEIINLSINETLSRTILTVITTLLANLALILFGGKAIHSFSVLVFFGIIAGTYSSIFISAPILTMFANRKFNKKVITQGKG
Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. {ECO:0000255|HAMAP-Rule:MF_01464}.
Q9ZE36
RL19_RICPR
Large ribosomal subunit protein bL19 (50S ribosomal protein L19)
MNIIDNFEQENIAKLTANKKIPDFEAGDTVKVTVKIIDKAIEKDGKEKLTERFQAYEGVVIAKRNRGITSSFLVRKISHGEGVERRFMTYSPIVHSIDVVKYGVVRRAKLYYLRHRNGKAARIREKLISRAKPKTAIS
This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
Q9ZE37
TRMD_RICPR
tRNA (guanine-N(1)-)-methyltransferase (EC 2.1.1.228) (M1G-methyltransferase) (tRNA [GM37] methyltransferase)
MSILHVTILTVFPEMFPGTLGYSLAGQALHNNIWSYNIINIRDFGLTKHKNVDDKAYGGGDGLIMRPDVLGNAIENALSLNHNAKIYYPSPRGCVFTQSFAKEMLKNKNLIFLCGRYEGIDERVIAEYNVTEVSVGDYILSGGEIPTLTILDCLIRLLPGVLINQNTLSSESFEKDGEFQGGLECDLYTRPKIWRGRAVPSILLSGNHRLINNWRKEQSHMITKLRRPELLKDL
Specifically methylates guanosine-37 in various tRNAs.
Q9ZE46
ENGB_RICPR
Probable GTP-binding protein EngB
MINNGKALNNKKSIDYSKLFRHQAKFVAGAIHINQIPDFSLPEIVFVGKSNVGKSSIINTICNNKSLAKVSNTPGRTRQINFFNIVDKLIIVDLPGYGFANVPISVKEQWEGLITYYLRNSHNLMLVNLLIDSRRGIKENDKKVAELLLANKREFQIIFTKSDKVTDRENLNYEAQNFLATLNYLCNVIYVSSRNKEGMRELKASFAQCIKHQR
Necessary for normal cell division and for the maintenance of normal septation. {ECO:0000255|HAMAP-Rule:MF_00321}.
Q9ZE47
RL31_RICPR
Large ribosomal subunit protein bL31 (50S ribosomal protein L31)
MKNGIHPEYKKLLIKVGSNIFETMSTHPIGEILMDVDFRKHPAWNKDSGNVVNQSNKSVSDFNKRFAGLSFDSKKEAS
Binds the 23S rRNA. {ECO:0000255|HAMAP-Rule:MF_00501}.
Q9ZE60
EFTS_RICPR
Elongation factor Ts (EF-Ts)
MSEINISAVVVKELREKTGAGMMDCKKALIETSGNFEEAIDFLRKKGLAAAVKKSGRIASEGLTAVKVDGLISAVIEVNSETDFVARNKQFQDLVKDIVNLAIIAQNIDTLKISKMQSGKSVEEEIIDNIAIIGENLTLRRMDILEISNGAIGSYVHNEVVPHLGKISVLVGLESNAKDKVKLEALAKQIAVHVAGNNPQSIDTLSLDKSLIEREKKVFFEKSKEEGKPNHIIEKMVEGRIRKFFSEVVLLHQNFLFEPKLTVAEVIKNAEQELSAEIKITKFIRYALGEGIEHAEKNFADEVAAITQC
Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF-Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (By similarity).
Q9ZE68
SECG_RICPR
Protein-export membrane protein SecG
MIDIFLFVHITISILLIIVILMQRSGSGGISGISGDNNMGVVSAKTVGNFLSKSTIILTTLFLINAIVLANLSAKKQSDLVSKINEIEENQADNSLPIAK
Involved in protein export. Participates in an early event of protein translocation (By similarity).
Q9ZE76
SECB_RICPR
Protein-export protein SecB
MSTINTDTSEAMPHISVNAQYIKDLSLENPSAPSSLAALDQRPQIDLSLDINITNLSEENFYEVELNIEAIARNEKYKLFQIELKYAGVFNLINIDSEQHPILLSVHCPAMIFPFARKIIASCTQDAGFQPLMIDPIDFGALYHKKMSEHQN
One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA. {ECO:0000255|HAMAP-Rule:MF_00821}.
Q9ZE87
PARB_RICPR
Probable chromosome-partitioning protein ParB
MVKNKGLGRGLSSLLGEEVLPIESEIVQIINIDKIKPNENQPRKHFEYNKIKELADSILNNGLLQPIIIDNNFQIIVGERRWRACKLAKVLEIPVIIKNFDTRESMEVALIENIQRTDLTVMEEARGFKYLVENFNYTVEKLAERLGKSRSHIANLLRLNNLPQSIQDKLNENILSMGHARCLINHEYAEEIADHIINHDLNVRQTEALVRQWHKNEYKKSSNNNNKVDKLCVKDNVIDNDLELLVKALSKKFGIKITIDNCRLGGKLMFHYKNLEELDLILSKLN
Involved in chromosome partition. Localize to both poles of the predivisional cell following completion of DNA replication. Binds to the DNA origin of replication (By similarity).
Q9ZE89
RSMG_RICPR
Ribosomal RNA small subunit methyltransferase G (EC 2.1.1.170) (16S rRNA 7-methylguanosine methyltransferase) (16S rRNA m7G methyltransferase)
MKVQSEIIEKLEIFQNLIKKWNKSINLISDNTIPNFWQRHILDSLQLMQYISNKEIHLIDIGSGAGFPGIVLSIAGVTKVSLIEADLRKCIFLAKASKISNNSIQIINQRIEKIEIDCSILTCRAFSNLNTIFNYTQNISVREKFLLLKGKSYLTEIVEAKERWSFDYLIHQSITCGSGKILEINNLTKII
Specifically methylates the N7 position of guanine in position 527 of 16S rRNA. {ECO:0000255|HAMAP-Rule:MF_00074}.
Q9ZE90
MNMG_RICPR
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG (Glucose-inhibited division protein A)
MLKYGVIIIGGGHAGVEAAAASARLGVHTLLITLKPENLGEMSCNPAIGGIAKGTLVKEIDALDGLMGFVIDKSGIHYKMLNETRGPAVWGPRAQADRKLYKKVMYQILTNYRNLDILYAKVEDIQIKSSKVEAVILSNGSKIFCQKVVLTTGTFLSGFIHIGSIKMPAGRIYEEPSYGLSNTLKRLGFKIARLKTGTPPRIDGRTIDYSKTALQQGDQIPRPFSELTDVIDVPQINCFITKTTSETHDIIRENLDKSAMYSGQIEGIGPRYCPSIEDKIVKFSTKLEHRIFLEPEGLEDYTIYPNGISTSLPEEVQYKLIKTIPGLENAQVLRPGYAIEYDYVDPREINVTLETKKITGLYFAGQINGTTGYEEAAGQGIIAGINAALSVKDQAPFILTRATSYIGVMIDDLTTFGTVEPYRMFTSRSEYRLSLRADNADLRLTELGIKIGVITEKRKKFFTKKCKNIEKTKLLLNNLSLTTSKLAKMGIQVAQDGKYKTILDLFKIPSFNVEQAIKIFPILKKQNNNILQLLYIEAKYASYLTRQYADINLFQSEEIQLIPKNIDYFKIPSISLEIQEKLSYHKPATIGVARRISGITPASITAIIIYLKTKYSDESSK
NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34. {ECO:0000255|HAMAP-Rule:MF_00129}.