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timothyb0912/pylogit
pylogit/asym_logit.py
_asym_transform_deriv_shape
def _asym_transform_deriv_shape(systematic_utilities, alt_IDs, rows_to_alts, eta, ref_position=None, dh_dc_array=None, fill_dc_d...
python
def _asym_transform_deriv_shape(systematic_utilities, alt_IDs, rows_to_alts, eta, ref_position=None, dh_dc_array=None, fill_dc_d...
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Parameters ---------- systematic_utilities : 1D ndarray. Contains the systematic utilities for each each available alternative for each observation. All elements should be ints, floats, or longs. alt_IDs : 1D ndarray. All elements should be ints. There should be one row per obervation...
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timothyb0912/pylogit
pylogit/asym_logit.py
create_calc_dh_dv
def create_calc_dh_dv(estimator): """ Return the function that can be used in the various gradient and hessian calculations to calculate the derivative of the transformation with respect to the index. Parameters ---------- estimator : an instance of the estimation.LogitTypeEstimator class. ...
python
def create_calc_dh_dv(estimator): """ Return the function that can be used in the various gradient and hessian calculations to calculate the derivative of the transformation with respect to the index. Parameters ---------- estimator : an instance of the estimation.LogitTypeEstimator class. ...
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timothyb0912/pylogit
pylogit/asym_logit.py
create_calc_dh_d_shape
def create_calc_dh_d_shape(estimator): """ Return the function that can be used in the various gradient and hessian calculations to calculate the derivative of the transformation with respect to the shape parameters. Parameters ---------- estimator : an instance of the estimation.LogitTypeE...
python
def create_calc_dh_d_shape(estimator): """ Return the function that can be used in the various gradient and hessian calculations to calculate the derivative of the transformation with respect to the shape parameters. Parameters ---------- estimator : an instance of the estimation.LogitTypeE...
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timothyb0912/pylogit
pylogit/scobit.py
_scobit_utility_transform
def _scobit_utility_transform(systematic_utilities, alt_IDs, rows_to_alts, shape_params, intercept_params, intercept_ref_pos=None, *args, **...
python
def _scobit_utility_transform(systematic_utilities, alt_IDs, rows_to_alts, shape_params, intercept_params, intercept_ref_pos=None, *args, **...
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timothyb0912/pylogit
pylogit/scobit.py
_scobit_transform_deriv_v
def _scobit_transform_deriv_v(systematic_utilities, alt_IDs, rows_to_alts, shape_params, output_array=None, *args, **kwargs): """ Parameters ---------- sy...
python
def _scobit_transform_deriv_v(systematic_utilities, alt_IDs, rows_to_alts, shape_params, output_array=None, *args, **kwargs): """ Parameters ---------- sy...
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timothyb0912/pylogit
pylogit/scobit.py
_scobit_transform_deriv_shape
def _scobit_transform_deriv_shape(systematic_utilities, alt_IDs, rows_to_alts, shape_params, output_array=None, *args, **kwargs): """ Paramete...
python
def _scobit_transform_deriv_shape(systematic_utilities, alt_IDs, rows_to_alts, shape_params, output_array=None, *args, **kwargs): """ Paramete...
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timothyb0912/pylogit
pylogit/scobit.py
MNSL.fit_mle
def fit_mle(self, init_vals, init_shapes=None, init_intercepts=None, init_coefs=None, print_res=True, method="BFGS", loss_tol=1e-06, gradient_tol=1e-06, maxiter=1000, ...
python
def fit_mle(self, init_vals, init_shapes=None, init_intercepts=None, init_coefs=None, print_res=True, method="BFGS", loss_tol=1e-06, gradient_tol=1e-06, maxiter=1000, ...
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timothyb0912/pylogit
pylogit/nested_logit.py
identify_degenerate_nests
def identify_degenerate_nests(nest_spec): """ Identify the nests within nest_spec that are degenerate, i.e. those nests with only a single alternative within the nest. Parameters ---------- nest_spec : OrderedDict. Keys are strings that define the name of the nests. Values are lists ...
python
def identify_degenerate_nests(nest_spec): """ Identify the nests within nest_spec that are degenerate, i.e. those nests with only a single alternative within the nest. Parameters ---------- nest_spec : OrderedDict. Keys are strings that define the name of the nests. Values are lists ...
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Identify the nests within nest_spec that are degenerate, i.e. those nests with only a single alternative within the nest. Parameters ---------- nest_spec : OrderedDict. Keys are strings that define the name of the nests. Values are lists of alternative ids, denoting which alternatives b...
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timothyb0912/pylogit
pylogit/nested_logit.py
split_param_vec
def split_param_vec(all_params, rows_to_nests, return_all_types=False): """ Parameters ---------- all_params : 1D ndarray. Should contain all of the parameters being estimated (i.e. all the nest coefficients and all of the index coefficients). All elements should be ints, floats,...
python
def split_param_vec(all_params, rows_to_nests, return_all_types=False): """ Parameters ---------- all_params : 1D ndarray. Should contain all of the parameters being estimated (i.e. all the nest coefficients and all of the index coefficients). All elements should be ints, floats,...
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timothyb0912/pylogit
pylogit/nested_logit.py
NestedEstimator.check_length_of_initial_values
def check_length_of_initial_values(self, init_values): """ Ensures that the initial values are of the correct length. """ # Figure out how many shape parameters we should have and how many # index coefficients we should have num_nests = self.rows_to_nests.shape[1] ...
python
def check_length_of_initial_values(self, init_values): """ Ensures that the initial values are of the correct length. """ # Figure out how many shape parameters we should have and how many # index coefficients we should have num_nests = self.rows_to_nests.shape[1] ...
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timothyb0912/pylogit
pylogit/nested_logit.py
NestedEstimator.convenience_split_params
def convenience_split_params(self, params, return_all_types=False): """ Splits parameter vector into nest parameters and index parameters. Parameters ---------- all_params : 1D ndarray. Should contain all of the parameters being estimated (i.e. all the ne...
python
def convenience_split_params(self, params, return_all_types=False): """ Splits parameter vector into nest parameters and index parameters. Parameters ---------- all_params : 1D ndarray. Should contain all of the parameters being estimated (i.e. all the ne...
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timothyb0912/pylogit
pylogit/nested_logit.py
NestedEstimator.convenience_calc_probs
def convenience_calc_probs(self, params): """ Calculates the probabilities of the chosen alternative, and the long format probabilities for this model and dataset. """ orig_nest_coefs, betas = self.convenience_split_params(params) natural_nest_coefs = nc.naturalize_nest_c...
python
def convenience_calc_probs(self, params): """ Calculates the probabilities of the chosen alternative, and the long format probabilities for this model and dataset. """ orig_nest_coefs, betas = self.convenience_split_params(params) natural_nest_coefs = nc.naturalize_nest_c...
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timothyb0912/pylogit
pylogit/nested_logit.py
NestedEstimator.convenience_calc_log_likelihood
def convenience_calc_log_likelihood(self, params): """ Calculates the log-likelihood for this model and dataset. """ orig_nest_coefs, betas = self.convenience_split_params(params) natural_nest_coefs = nc.naturalize_nest_coefs(orig_nest_coefs) args = [natural_nest_coefs, ...
python
def convenience_calc_log_likelihood(self, params): """ Calculates the log-likelihood for this model and dataset. """ orig_nest_coefs, betas = self.convenience_split_params(params) natural_nest_coefs = nc.naturalize_nest_coefs(orig_nest_coefs) args = [natural_nest_coefs, ...
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timothyb0912/pylogit
pylogit/nested_logit.py
NestedEstimator.convenience_calc_gradient
def convenience_calc_gradient(self, params): """ Calculates the gradient of the log-likelihood for this model / dataset. """ orig_nest_coefs, betas = self.convenience_split_params(params) args = [orig_nest_coefs, betas, self.design, ...
python
def convenience_calc_gradient(self, params): """ Calculates the gradient of the log-likelihood for this model / dataset. """ orig_nest_coefs, betas = self.convenience_split_params(params) args = [orig_nest_coefs, betas, self.design, ...
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timothyb0912/pylogit
pylogit/nested_logit.py
NestedEstimator.convenience_calc_hessian
def convenience_calc_hessian(self, params): """ Calculates the hessian of the log-likelihood for this model / dataset. Note that this function name is INCORRECT with regard to the actual actions performed. The Nested Logit model uses the BHHH approximation to the Fisher Informati...
python
def convenience_calc_hessian(self, params): """ Calculates the hessian of the log-likelihood for this model / dataset. Note that this function name is INCORRECT with regard to the actual actions performed. The Nested Logit model uses the BHHH approximation to the Fisher Informati...
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Calculates the hessian of the log-likelihood for this model / dataset. Note that this function name is INCORRECT with regard to the actual actions performed. The Nested Logit model uses the BHHH approximation to the Fisher Information Matrix in place of the actual hessian.
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timothyb0912/pylogit
pylogit/nested_logit.py
NestedEstimator.convenience_calc_fisher_approx
def convenience_calc_fisher_approx(self, params): """ Calculates the BHHH approximation of the Fisher Information Matrix for this model / dataset. Note that this function name is INCORRECT with regard to the actual actions performed. The Nested Logit model uses a placeholder for ...
python
def convenience_calc_fisher_approx(self, params): """ Calculates the BHHH approximation of the Fisher Information Matrix for this model / dataset. Note that this function name is INCORRECT with regard to the actual actions performed. The Nested Logit model uses a placeholder for ...
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Calculates the BHHH approximation of the Fisher Information Matrix for this model / dataset. Note that this function name is INCORRECT with regard to the actual actions performed. The Nested Logit model uses a placeholder for the BHHH approximation of the Fisher Information Matrix becaus...
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train
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timothyb0912/pylogit
pylogit/nested_logit.py
NestedLogit.fit_mle
def fit_mle(self, init_vals, constrained_pos=None, print_res=True, method="BFGS", loss_tol=1e-06, gradient_tol=1e-06, maxiter=1000, ridge=None, just_point=False, ...
python
def fit_mle(self, init_vals, constrained_pos=None, print_res=True, method="BFGS", loss_tol=1e-06, gradient_tol=1e-06, maxiter=1000, ridge=None, just_point=False, ...
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timothyb0912/pylogit
pylogit/choice_calcs.py
calc_probabilities
def calc_probabilities(beta, design, alt_IDs, rows_to_obs, rows_to_alts, utility_transform, intercept_params=None, shape_params=None, ch...
python
def calc_probabilities(beta, design, alt_IDs, rows_to_obs, rows_to_alts, utility_transform, intercept_params=None, shape_params=None, ch...
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Parameters ---------- beta : 1D or 2D ndarray. All elements should by ints, floats, or longs. If 1D, should have 1 element for each utility coefficient being estimated (i.e. num_features). If 2D, should have 1 column for each set of coefficients being used to predict the probabil...
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timothyb0912/pylogit
pylogit/choice_calcs.py
calc_log_likelihood
def calc_log_likelihood(beta, design, alt_IDs, rows_to_obs, rows_to_alts, choice_vector, utility_transform, intercept_params=None, ...
python
def calc_log_likelihood(beta, design, alt_IDs, rows_to_obs, rows_to_alts, choice_vector, utility_transform, intercept_params=None, ...
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timothyb0912/pylogit
pylogit/choice_calcs.py
calc_gradient
def calc_gradient(beta, design, alt_IDs, rows_to_obs, rows_to_alts, choice_vector, utility_transform, transform_first_deriv_c, transform_first_deriv_v, transf...
python
def calc_gradient(beta, design, alt_IDs, rows_to_obs, rows_to_alts, choice_vector, utility_transform, transform_first_deriv_c, transform_first_deriv_v, transf...
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timothyb0912/pylogit
pylogit/choice_calcs.py
create_matrix_block_indices
def create_matrix_block_indices(row_to_obs): """ Parameters ---------- row_to_obs: 2D ndarray. There should be one row per observation per available alternative and one column per observation. This matrix maps the rows of the design matrix to the unique observations (on the colum...
python
def create_matrix_block_indices(row_to_obs): """ Parameters ---------- row_to_obs: 2D ndarray. There should be one row per observation per available alternative and one column per observation. This matrix maps the rows of the design matrix to the unique observations (on the colum...
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timothyb0912/pylogit
pylogit/choice_calcs.py
robust_outer_product
def robust_outer_product(vec_1, vec_2): """ Calculates a 'robust' outer product of two vectors that may or may not contain very small values. Parameters ---------- vec_1 : 1D ndarray vec_2 : 1D ndarray Returns ------- outer_prod : 2D ndarray. The outer product of vec_1 and vec_...
python
def robust_outer_product(vec_1, vec_2): """ Calculates a 'robust' outer product of two vectors that may or may not contain very small values. Parameters ---------- vec_1 : 1D ndarray vec_2 : 1D ndarray Returns ------- outer_prod : 2D ndarray. The outer product of vec_1 and vec_...
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Calculates a 'robust' outer product of two vectors that may or may not contain very small values. Parameters ---------- vec_1 : 1D ndarray vec_2 : 1D ndarray Returns ------- outer_prod : 2D ndarray. The outer product of vec_1 and vec_2
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timothyb0912/pylogit
pylogit/choice_calcs.py
create_matrix_blocks
def create_matrix_blocks(long_probs, matrix_block_indices): """ Parameters ---------- long_probs : 1D ndarray. There should be one row per observation per available alternative. The elements of the array will indicate the probability of the alternative being the outcome associate...
python
def create_matrix_blocks(long_probs, matrix_block_indices): """ Parameters ---------- long_probs : 1D ndarray. There should be one row per observation per available alternative. The elements of the array will indicate the probability of the alternative being the outcome associate...
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timothyb0912/pylogit
pylogit/choice_calcs.py
calc_hessian
def calc_hessian(beta, design, alt_IDs, rows_to_obs, rows_to_alts, utility_transform, transform_first_deriv_c, transform_first_deriv_v, transform_deriv_alpha, block_ma...
python
def calc_hessian(beta, design, alt_IDs, rows_to_obs, rows_to_alts, utility_transform, transform_first_deriv_c, transform_first_deriv_v, transform_deriv_alpha, block_ma...
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timothyb0912/pylogit
pylogit/choice_calcs.py
calc_fisher_info_matrix
def calc_fisher_info_matrix(beta, design, alt_IDs, rows_to_obs, rows_to_alts, choice_vector, utility_transform, transform_fi...
python
def calc_fisher_info_matrix(beta, design, alt_IDs, rows_to_obs, rows_to_alts, choice_vector, utility_transform, transform_fi...
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timothyb0912/pylogit
pylogit/choice_calcs.py
calc_asymptotic_covariance
def calc_asymptotic_covariance(hessian, fisher_info_matrix): """ Parameters ---------- hessian : 2D ndarray. It should have shape `(num_vars, num_vars)`. It is the matrix of second derivatives of the total loss across the dataset, with respect to each pair of coefficients being e...
python
def calc_asymptotic_covariance(hessian, fisher_info_matrix): """ Parameters ---------- hessian : 2D ndarray. It should have shape `(num_vars, num_vars)`. It is the matrix of second derivatives of the total loss across the dataset, with respect to each pair of coefficients being e...
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timothyb0912/pylogit
pylogit/bootstrap_calcs.py
calc_percentile_interval
def calc_percentile_interval(bootstrap_replicates, conf_percentage): """ Calculate bootstrap confidence intervals based on raw percentiles of the bootstrap distribution of samples. Parameters ---------- bootstrap_replicates : 2D ndarray. Each row should correspond to a different bootstr...
python
def calc_percentile_interval(bootstrap_replicates, conf_percentage): """ Calculate bootstrap confidence intervals based on raw percentiles of the bootstrap distribution of samples. Parameters ---------- bootstrap_replicates : 2D ndarray. Each row should correspond to a different bootstr...
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timothyb0912/pylogit
pylogit/bootstrap_calcs.py
calc_bias_correction_bca
def calc_bias_correction_bca(bootstrap_replicates, mle_estimate): """ Calculate the bias correction for the Bias Corrected and Accelerated (BCa) bootstrap confidence intervals. Parameters ---------- bootstrap_replicates : 2D ndarray. Each row should correspond to a different bootstrap p...
python
def calc_bias_correction_bca(bootstrap_replicates, mle_estimate): """ Calculate the bias correction for the Bias Corrected and Accelerated (BCa) bootstrap confidence intervals. Parameters ---------- bootstrap_replicates : 2D ndarray. Each row should correspond to a different bootstrap p...
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timothyb0912/pylogit
pylogit/bootstrap_calcs.py
calc_acceleration_bca
def calc_acceleration_bca(jackknife_replicates): """ Calculate the acceleration constant for the Bias Corrected and Accelerated (BCa) bootstrap confidence intervals. Parameters ---------- jackknife_replicates : 2D ndarray. Each row should correspond to a different jackknife parameter sa...
python
def calc_acceleration_bca(jackknife_replicates): """ Calculate the acceleration constant for the Bias Corrected and Accelerated (BCa) bootstrap confidence intervals. Parameters ---------- jackknife_replicates : 2D ndarray. Each row should correspond to a different jackknife parameter sa...
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timothyb0912/pylogit
pylogit/bootstrap_calcs.py
calc_lower_bca_percentile
def calc_lower_bca_percentile(alpha_percent, bias_correction, acceleration): """ Calculate the lower values of the Bias Corrected and Accelerated (BCa) bootstrap confidence intervals. Parameters ---------- alpha_percent : float in (0.0, 100.0). `100 - confidence_percentage`, where `conf...
python
def calc_lower_bca_percentile(alpha_percent, bias_correction, acceleration): """ Calculate the lower values of the Bias Corrected and Accelerated (BCa) bootstrap confidence intervals. Parameters ---------- alpha_percent : float in (0.0, 100.0). `100 - confidence_percentage`, where `conf...
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Calculate the lower values of the Bias Corrected and Accelerated (BCa) bootstrap confidence intervals. Parameters ---------- alpha_percent : float in (0.0, 100.0). `100 - confidence_percentage`, where `confidence_percentage` is the confidence level (such as 95%), expressed as a percent....
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timothyb0912/pylogit
pylogit/bootstrap_calcs.py
calc_upper_bca_percentile
def calc_upper_bca_percentile(alpha_percent, bias_correction, acceleration): """ Calculate the lower values of the Bias Corrected and Accelerated (BCa) bootstrap confidence intervals. Parameters ---------- alpha_percent : float in (0.0, 100.0). `100 - confidence_percentage`, where `conf...
python
def calc_upper_bca_percentile(alpha_percent, bias_correction, acceleration): """ Calculate the lower values of the Bias Corrected and Accelerated (BCa) bootstrap confidence intervals. Parameters ---------- alpha_percent : float in (0.0, 100.0). `100 - confidence_percentage`, where `conf...
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timothyb0912/pylogit
pylogit/bootstrap_calcs.py
calc_bca_interval
def calc_bca_interval(bootstrap_replicates, jackknife_replicates, mle_params, conf_percentage): """ Calculate 'bias-corrected and accelerated' bootstrap confidence intervals. Parameters ---------- bootstrap_replicates : 2D ndarray. ...
python
def calc_bca_interval(bootstrap_replicates, jackknife_replicates, mle_params, conf_percentage): """ Calculate 'bias-corrected and accelerated' bootstrap confidence intervals. Parameters ---------- bootstrap_replicates : 2D ndarray. ...
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timothyb0912/pylogit
pylogit/bootstrap_mle.py
extract_default_init_vals
def extract_default_init_vals(orig_model_obj, mnl_point_series, num_params): """ Get the default initial values for the desired model type, based on the point estimate of the MNL model that is 'closest' to the desired model. Parameters ---------- orig_model_obj : an instance or sublcass of the ...
python
def extract_default_init_vals(orig_model_obj, mnl_point_series, num_params): """ Get the default initial values for the desired model type, based on the point estimate of the MNL model that is 'closest' to the desired model. Parameters ---------- orig_model_obj : an instance or sublcass of the ...
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timothyb0912/pylogit
pylogit/bootstrap_mle.py
get_model_abbrev
def get_model_abbrev(model_obj): """ Extract the string used to specify the model type of this model object in `pylogit.create_chohice_model`. Parameters ---------- model_obj : An MNDC_Model instance. Returns ------- str. The internal abbreviation used for the particular type of MN...
python
def get_model_abbrev(model_obj): """ Extract the string used to specify the model type of this model object in `pylogit.create_chohice_model`. Parameters ---------- model_obj : An MNDC_Model instance. Returns ------- str. The internal abbreviation used for the particular type of MN...
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Extract the string used to specify the model type of this model object in `pylogit.create_chohice_model`. Parameters ---------- model_obj : An MNDC_Model instance. Returns ------- str. The internal abbreviation used for the particular type of MNDC_Model.
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timothyb0912/pylogit
pylogit/bootstrap_mle.py
get_model_creation_kwargs
def get_model_creation_kwargs(model_obj): """ Get a dictionary of the keyword arguments needed to create the passed model object using `pylogit.create_choice_model`. Parameters ---------- model_obj : An MNDC_Model instance. Returns ------- model_kwargs : dict. Contains the ...
python
def get_model_creation_kwargs(model_obj): """ Get a dictionary of the keyword arguments needed to create the passed model object using `pylogit.create_choice_model`. Parameters ---------- model_obj : An MNDC_Model instance. Returns ------- model_kwargs : dict. Contains the ...
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Get a dictionary of the keyword arguments needed to create the passed model object using `pylogit.create_choice_model`. Parameters ---------- model_obj : An MNDC_Model instance. Returns ------- model_kwargs : dict. Contains the keyword arguments and the required values that are nee...
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train
https://github.com/timothyb0912/pylogit/blob/f83b0fd6debaa7358d87c3828428f6d4ead71357/pylogit/bootstrap_mle.py#L103-L133
timothyb0912/pylogit
pylogit/bootstrap_mle.py
get_mnl_point_est
def get_mnl_point_est(orig_model_obj, new_df, boot_id_col, num_params, mnl_spec, mnl_names, mnl_init_vals, mnl_fit_kwargs): """ Calculates the MLE for the des...
python
def get_mnl_point_est(orig_model_obj, new_df, boot_id_col, num_params, mnl_spec, mnl_names, mnl_init_vals, mnl_fit_kwargs): """ Calculates the MLE for the des...
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Calculates the MLE for the desired MNL model. Parameters ---------- orig_model_obj : An MNDC_Model instance. The object corresponding to the desired model being bootstrapped. new_df : pandas DataFrame. The pandas dataframe containing the data to be used to estimate the MLE of th...
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train
https://github.com/timothyb0912/pylogit/blob/f83b0fd6debaa7358d87c3828428f6d4ead71357/pylogit/bootstrap_mle.py#L136-L219
timothyb0912/pylogit
pylogit/bootstrap_mle.py
retrieve_point_est
def retrieve_point_est(orig_model_obj, new_df, new_id_col, num_params, mnl_spec, mnl_names, mnl_init_vals, mnl_fit_kwargs, extract_init_...
python
def retrieve_point_est(orig_model_obj, new_df, new_id_col, num_params, mnl_spec, mnl_names, mnl_init_vals, mnl_fit_kwargs, extract_init_...
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Calculates the MLE for the desired MNL model. Parameters ---------- orig_model_obj : An MNDC_Model instance. The object corresponding to the desired model being bootstrapped. new_df : pandas DataFrame. The pandas dataframe containing the data to be used to estimate the MLE of th...
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train
https://github.com/timothyb0912/pylogit/blob/f83b0fd6debaa7358d87c3828428f6d4ead71357/pylogit/bootstrap_mle.py#L222-L335
timothyb0912/pylogit
pylogit/pylogit.py
ensure_valid_model_type
def ensure_valid_model_type(specified_type, model_type_list): """ Checks to make sure that `specified_type` is in `model_type_list` and raises a helpful error if this is not the case. Parameters ---------- specified_type : str. Denotes the user-specified model type that is to be checked...
python
def ensure_valid_model_type(specified_type, model_type_list): """ Checks to make sure that `specified_type` is in `model_type_list` and raises a helpful error if this is not the case. Parameters ---------- specified_type : str. Denotes the user-specified model type that is to be checked...
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Checks to make sure that `specified_type` is in `model_type_list` and raises a helpful error if this is not the case. Parameters ---------- specified_type : str. Denotes the user-specified model type that is to be checked. model_type_list : list of strings. Contains all of the model...
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train
https://github.com/timothyb0912/pylogit/blob/f83b0fd6debaa7358d87c3828428f6d4ead71357/pylogit/pylogit.py#L58-L80
timothyb0912/pylogit
pylogit/pylogit.py
create_choice_model
def create_choice_model(data, alt_id_col, obs_id_col, choice_col, specification, model_type, intercept_ref_pos=None, shape_ref_pos=None, ...
python
def create_choice_model(data, alt_id_col, obs_id_col, choice_col, specification, model_type, intercept_ref_pos=None, shape_ref_pos=None, ...
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Parameters ---------- data : string or pandas dataframe. If `data` is a string, it should be an absolute or relative path to a CSV file containing the long format data for this choice model. Note long format has one row per available alternative for each observation. If `data` is...
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train
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
ensure_valid_nums_in_specification_cols
def ensure_valid_nums_in_specification_cols(specification, dataframe): """ Checks whether each column in `specification` contains numeric data, excluding positive or negative infinity and excluding NaN. Raises ValueError if any of the columns do not meet these requirements. Parameters ---------...
python
def ensure_valid_nums_in_specification_cols(specification, dataframe): """ Checks whether each column in `specification` contains numeric data, excluding positive or negative infinity and excluding NaN. Raises ValueError if any of the columns do not meet these requirements. Parameters ---------...
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train
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
ensure_ref_position_is_valid
def ensure_ref_position_is_valid(ref_position, num_alts, param_title): """ Ensures that `ref_position` is None or an integer that is in the interval `[0, num_alts - 1]`. If None, ensures that intercepts are not the parameters being estimated. Raises a helpful ValueError if otherwise. Parameters ...
python
def ensure_ref_position_is_valid(ref_position, num_alts, param_title): """ Ensures that `ref_position` is None or an integer that is in the interval `[0, num_alts - 1]`. If None, ensures that intercepts are not the parameters being estimated. Raises a helpful ValueError if otherwise. Parameters ...
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Ensures that `ref_position` is None or an integer that is in the interval `[0, num_alts - 1]`. If None, ensures that intercepts are not the parameters being estimated. Raises a helpful ValueError if otherwise. Parameters ---------- ref_position : int. An integer denoting the position in an ...
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train
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
check_length_of_shape_or_intercept_names
def check_length_of_shape_or_intercept_names(name_list, num_alts, constrained_param, list_title): """ Ensures that the length of the parameter names matches the number of pa...
python
def check_length_of_shape_or_intercept_names(name_list, num_alts, constrained_param, list_title): """ Ensures that the length of the parameter names matches the number of pa...
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Ensures that the length of the parameter names matches the number of parameters that will be estimated. Will raise a ValueError otherwise. Parameters ---------- name_list : list of strings. Each element should be the name of a parameter that is to be estimated. num_alts : int. Shoul...
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train
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
check_type_of_nest_spec_keys_and_values
def check_type_of_nest_spec_keys_and_values(nest_spec): """ Ensures that the keys and values of `nest_spec` are strings and lists. Raises a helpful ValueError if they are. Parameters ---------- nest_spec : OrderedDict, or None, optional. Keys are strings that define the name of the nest...
python
def check_type_of_nest_spec_keys_and_values(nest_spec): """ Ensures that the keys and values of `nest_spec` are strings and lists. Raises a helpful ValueError if they are. Parameters ---------- nest_spec : OrderedDict, or None, optional. Keys are strings that define the name of the nest...
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Ensures that the keys and values of `nest_spec` are strings and lists. Raises a helpful ValueError if they are. Parameters ---------- nest_spec : OrderedDict, or None, optional. Keys are strings that define the name of the nests. Values are lists of alternative ids, denoting which alter...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
check_for_empty_nests_in_nest_spec
def check_for_empty_nests_in_nest_spec(nest_spec): """ Ensures that the values of `nest_spec` are not empty lists. Raises a helpful ValueError if they are. Parameters ---------- nest_spec : OrderedDict, or None, optional. Keys are strings that define the name of the nests. Values are li...
python
def check_for_empty_nests_in_nest_spec(nest_spec): """ Ensures that the values of `nest_spec` are not empty lists. Raises a helpful ValueError if they are. Parameters ---------- nest_spec : OrderedDict, or None, optional. Keys are strings that define the name of the nests. Values are li...
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Ensures that the values of `nest_spec` are not empty lists. Raises a helpful ValueError if they are. Parameters ---------- nest_spec : OrderedDict, or None, optional. Keys are strings that define the name of the nests. Values are lists of alternative ids, denoting which alternatives bel...
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train
https://github.com/timothyb0912/pylogit/blob/f83b0fd6debaa7358d87c3828428f6d4ead71357/pylogit/base_multinomial_cm_v2.py#L210-L235
timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
ensure_alt_ids_in_nest_spec_are_ints
def ensure_alt_ids_in_nest_spec_are_ints(nest_spec, list_elements): """ Ensures that the alternative id's in `nest_spec` are integers. Raises a helpful ValueError if they are not. Parameters ---------- nest_spec : OrderedDict, or None, optional. Keys are strings that define the name of ...
python
def ensure_alt_ids_in_nest_spec_are_ints(nest_spec, list_elements): """ Ensures that the alternative id's in `nest_spec` are integers. Raises a helpful ValueError if they are not. Parameters ---------- nest_spec : OrderedDict, or None, optional. Keys are strings that define the name of ...
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Ensures that the alternative id's in `nest_spec` are integers. Raises a helpful ValueError if they are not. Parameters ---------- nest_spec : OrderedDict, or None, optional. Keys are strings that define the name of the nests. Values are lists of alternative ids, denoting which alternati...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
ensure_alt_ids_are_only_in_one_nest
def ensure_alt_ids_are_only_in_one_nest(nest_spec, list_elements): """ Ensures that the alternative id's in `nest_spec` are only associated with a single nest. Raises a helpful ValueError if they are not. Parameters ---------- nest_spec : OrderedDict, or None, optional. Keys are strings...
python
def ensure_alt_ids_are_only_in_one_nest(nest_spec, list_elements): """ Ensures that the alternative id's in `nest_spec` are only associated with a single nest. Raises a helpful ValueError if they are not. Parameters ---------- nest_spec : OrderedDict, or None, optional. Keys are strings...
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Ensures that the alternative id's in `nest_spec` are only associated with a single nest. Raises a helpful ValueError if they are not. Parameters ---------- nest_spec : OrderedDict, or None, optional. Keys are strings that define the name of the nests. Values are lists of alternative ids...
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train
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
ensure_all_alt_ids_have_a_nest
def ensure_all_alt_ids_have_a_nest(nest_spec, list_elements, all_ids): """ Ensures that the alternative id's in `nest_spec` are all associated with a nest. Raises a helpful ValueError if they are not. Parameters ---------- nest_spec : OrderedDict, or None, optional. Keys are strings tha...
python
def ensure_all_alt_ids_have_a_nest(nest_spec, list_elements, all_ids): """ Ensures that the alternative id's in `nest_spec` are all associated with a nest. Raises a helpful ValueError if they are not. Parameters ---------- nest_spec : OrderedDict, or None, optional. Keys are strings tha...
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Ensures that the alternative id's in `nest_spec` are all associated with a nest. Raises a helpful ValueError if they are not. Parameters ---------- nest_spec : OrderedDict, or None, optional. Keys are strings that define the name of the nests. Values are lists of alternative ids, denoti...
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train
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
ensure_nest_alts_are_valid_alts
def ensure_nest_alts_are_valid_alts(nest_spec, list_elements, all_ids): """ Ensures that the alternative id's in `nest_spec` are all in the universal choice set for this dataset. Raises a helpful ValueError if they are not. Parameters ---------- nest_spec : OrderedDict, or None, optional. ...
python
def ensure_nest_alts_are_valid_alts(nest_spec, list_elements, all_ids): """ Ensures that the alternative id's in `nest_spec` are all in the universal choice set for this dataset. Raises a helpful ValueError if they are not. Parameters ---------- nest_spec : OrderedDict, or None, optional. ...
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Ensures that the alternative id's in `nest_spec` are all in the universal choice set for this dataset. Raises a helpful ValueError if they are not. Parameters ---------- nest_spec : OrderedDict, or None, optional. Keys are strings that define the name of the nests. Values are lists of a...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
check_num_rows_of_parameter_array
def check_num_rows_of_parameter_array(param_array, correct_num_rows, title): """ Ensures that `param_array.shape[0]` has the correct magnitude. Raises a helpful ValueError if otherwise. Parameters ---------- param_array : ndarray. correct_num_rows : int. The int that `param_array.sh...
python
def check_num_rows_of_parameter_array(param_array, correct_num_rows, title): """ Ensures that `param_array.shape[0]` has the correct magnitude. Raises a helpful ValueError if otherwise. Parameters ---------- param_array : ndarray. correct_num_rows : int. The int that `param_array.sh...
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Ensures that `param_array.shape[0]` has the correct magnitude. Raises a helpful ValueError if otherwise. Parameters ---------- param_array : ndarray. correct_num_rows : int. The int that `param_array.shape[0]` should equal. title : str. The 'name' of the param_array whose shape ...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
check_type_and_size_of_param_list
def check_type_and_size_of_param_list(param_list, expected_length): """ Ensure that param_list is a list with the expected length. Raises a helpful ValueError if this is not the case. """ try: assert isinstance(param_list, list) assert len(param_list) == expected_length except As...
python
def check_type_and_size_of_param_list(param_list, expected_length): """ Ensure that param_list is a list with the expected length. Raises a helpful ValueError if this is not the case. """ try: assert isinstance(param_list, list) assert len(param_list) == expected_length except As...
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Ensure that param_list is a list with the expected length. Raises a helpful ValueError if this is not the case.
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train
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
check_type_of_param_list_elements
def check_type_of_param_list_elements(param_list): """ Ensures that all elements of param_list are ndarrays or None. Raises a helpful ValueError if otherwise. """ try: assert isinstance(param_list[0], np.ndarray) assert all([(x is None or isinstance(x, np.ndarray)) ...
python
def check_type_of_param_list_elements(param_list): """ Ensures that all elements of param_list are ndarrays or None. Raises a helpful ValueError if otherwise. """ try: assert isinstance(param_list[0], np.ndarray) assert all([(x is None or isinstance(x, np.ndarray)) ...
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Ensures that all elements of param_list are ndarrays or None. Raises a helpful ValueError if otherwise.
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
check_num_columns_in_param_list_arrays
def check_num_columns_in_param_list_arrays(param_list): """ Ensure that each array in param_list, that is not None, has the same number of columns. Raises a helpful ValueError if otherwise. Parameters ---------- param_list : list of ndarrays or None. Returns ------- None. """ ...
python
def check_num_columns_in_param_list_arrays(param_list): """ Ensure that each array in param_list, that is not None, has the same number of columns. Raises a helpful ValueError if otherwise. Parameters ---------- param_list : list of ndarrays or None. Returns ------- None. """ ...
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Ensure that each array in param_list, that is not None, has the same number of columns. Raises a helpful ValueError if otherwise. Parameters ---------- param_list : list of ndarrays or None. Returns ------- None.
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
check_dimensional_equality_of_param_list_arrays
def check_dimensional_equality_of_param_list_arrays(param_list): """ Ensures that all arrays in param_list have the same dimension, and that this dimension is either 1 or 2 (i.e. all arrays are 1D arrays or all arrays are 2D arrays.) Raises a helpful ValueError if otherwise. Parameters --------...
python
def check_dimensional_equality_of_param_list_arrays(param_list): """ Ensures that all arrays in param_list have the same dimension, and that this dimension is either 1 or 2 (i.e. all arrays are 1D arrays or all arrays are 2D arrays.) Raises a helpful ValueError if otherwise. Parameters --------...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
ensure_all_mixing_vars_are_in_the_name_dict
def ensure_all_mixing_vars_are_in_the_name_dict(mixing_vars, name_dict, ind_var_names): """ Ensures that all of the variables listed in `mixing_vars` are present in `ind_var_names`. Raises a helpful ValueError if...
python
def ensure_all_mixing_vars_are_in_the_name_dict(mixing_vars, name_dict, ind_var_names): """ Ensures that all of the variables listed in `mixing_vars` are present in `ind_var_names`. Raises a helpful ValueError if...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
ensure_all_alternatives_are_chosen
def ensure_all_alternatives_are_chosen(alt_id_col, choice_col, dataframe): """ Ensures that all of the available alternatives in the dataset are chosen at least once (for model identification). Raises a ValueError otherwise. Parameters ---------- alt_id_col : str. Should denote the colu...
python
def ensure_all_alternatives_are_chosen(alt_id_col, choice_col, dataframe): """ Ensures that all of the available alternatives in the dataset are chosen at least once (for model identification). Raises a ValueError otherwise. Parameters ---------- alt_id_col : str. Should denote the colu...
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Ensures that all of the available alternatives in the dataset are chosen at least once (for model identification). Raises a ValueError otherwise. Parameters ---------- alt_id_col : str. Should denote the column in `dataframe` that contains the alternative identifiers for each row. c...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
compute_aic
def compute_aic(model_object): """ Compute the Akaike Information Criteria for an estimated model. Parameters ---------- model_object : an MNDC_Model (multinomial discrete choice model) instance. The model should have already been estimated. `model_object.log_likelihood` should be a...
python
def compute_aic(model_object): """ Compute the Akaike Information Criteria for an estimated model. Parameters ---------- model_object : an MNDC_Model (multinomial discrete choice model) instance. The model should have already been estimated. `model_object.log_likelihood` should be a...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
compute_bic
def compute_bic(model_object): """ Compute the Bayesian Information Criteria for an estimated model. Parameters ---------- model_object : an MNDC_Model (multinomial discrete choice model) instance. The model should have already been estimated. `model_object.log_likelihood` and `mode...
python
def compute_bic(model_object): """ Compute the Bayesian Information Criteria for an estimated model. Parameters ---------- model_object : an MNDC_Model (multinomial discrete choice model) instance. The model should have already been estimated. `model_object.log_likelihood` and `mode...
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Compute the Bayesian Information Criteria for an estimated model. Parameters ---------- model_object : an MNDC_Model (multinomial discrete choice model) instance. The model should have already been estimated. `model_object.log_likelihood` and `model_object.nobs` should be a number, ...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model.get_mappings_for_fit
def get_mappings_for_fit(self, dense=False): """ Parameters ---------- dense : bool, optional. Dictates if sparse matrices will be returned or dense numpy arrays. Returns ------- mapping_dict : OrderedDict. Keys will be `["rows_to_obs", "r...
python
def get_mappings_for_fit(self, dense=False): """ Parameters ---------- dense : bool, optional. Dictates if sparse matrices will be returned or dense numpy arrays. Returns ------- mapping_dict : OrderedDict. Keys will be `["rows_to_obs", "r...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model._store_basic_estimation_results
def _store_basic_estimation_results(self, results_dict): """ Extracts the basic estimation results (i.e. those that need no further calculation or logic applied to them) and stores them on the model object. Parameters ---------- results_dict : dict. ...
python
def _store_basic_estimation_results(self, results_dict): """ Extracts the basic estimation results (i.e. those that need no further calculation or logic applied to them) and stores them on the model object. Parameters ---------- results_dict : dict. ...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model._create_results_summary
def _create_results_summary(self): """ Create the dataframe that displays the estimation results, and store it on the model instance. Returns ------- None. """ # Make sure we have all attributes needed to create the results summary needed_attribut...
python
def _create_results_summary(self): """ Create the dataframe that displays the estimation results, and store it on the model instance. Returns ------- None. """ # Make sure we have all attributes needed to create the results summary needed_attribut...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model._record_values_for_fit_summary_and_statsmodels
def _record_values_for_fit_summary_and_statsmodels(self): """ Store the various estimation results that are used to describe how well the estimated model fits the given dataset, and record the values that are needed for the statsmodels estimation results table. All values are sto...
python
def _record_values_for_fit_summary_and_statsmodels(self): """ Store the various estimation results that are used to describe how well the estimated model fits the given dataset, and record the values that are needed for the statsmodels estimation results table. All values are sto...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model._create_fit_summary
def _create_fit_summary(self): """ Create and store a pandas series that will display to users the various statistics/values that indicate how well the estimated model fit the given dataset. Returns ------- None. """ # Make sure we have all attrib...
python
def _create_fit_summary(self): """ Create and store a pandas series that will display to users the various statistics/values that indicate how well the estimated model fit the given dataset. Returns ------- None. """ # Make sure we have all attrib...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model._store_inferential_results
def _store_inferential_results(self, value_array, index_names, attribute_name, series_name=None, column_names=None): """ Store th...
python
def _store_inferential_results(self, value_array, index_names, attribute_name, series_name=None, column_names=None): """ Store th...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model._store_generic_inference_results
def _store_generic_inference_results(self, results_dict, all_params, all_names): """ Store the model inference values that are common to all choice models. This includes thi...
python
def _store_generic_inference_results(self, results_dict, all_params, all_names): """ Store the model inference values that are common to all choice models. This includes thi...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model._store_optional_parameters
def _store_optional_parameters(self, optional_params, name_list_attr, default_name_str, all_names, all_params, ...
python
def _store_optional_parameters(self, optional_params, name_list_attr, default_name_str, all_names, all_params, ...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model._adjust_inferential_results_for_parameter_constraints
def _adjust_inferential_results_for_parameter_constraints(self, constraints): """ Ensure that parameters that were constrained during estimation do not have any values showed for inferential results. After all, no inference wa...
python
def _adjust_inferential_results_for_parameter_constraints(self, constraints): """ Ensure that parameters that were constrained during estimation do not have any values showed for inferential results. After all, no inference wa...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model._check_result_dict_for_needed_keys
def _check_result_dict_for_needed_keys(self, results_dict): """ Ensure that `results_dict` has the needed keys to store all the estimation results. Raise a helpful ValueError otherwise. """ missing_cols = [x for x in needed_result_keys if x not in results_dict] if missing...
python
def _check_result_dict_for_needed_keys(self, results_dict): """ Ensure that `results_dict` has the needed keys to store all the estimation results. Raise a helpful ValueError otherwise. """ missing_cols = [x for x in needed_result_keys if x not in results_dict] if missing...
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Ensure that `results_dict` has the needed keys to store all the estimation results. Raise a helpful ValueError otherwise.
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model._add_mixing_variable_names_to_individual_vars
def _add_mixing_variable_names_to_individual_vars(self): """ Ensure that the model objects mixing variables are added to its list of individual variables. """ assert isinstance(self.ind_var_names, list) # Note that if one estimates a mixed logit model, then the mixing ...
python
def _add_mixing_variable_names_to_individual_vars(self): """ Ensure that the model objects mixing variables are added to its list of individual variables. """ assert isinstance(self.ind_var_names, list) # Note that if one estimates a mixed logit model, then the mixing ...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model.store_fit_results
def store_fit_results(self, results_dict): """ Parameters ---------- results_dict : dict. The estimation result dictionary that is output from scipy.optimize.minimize. In addition to the standard keys which are included, it should also contain the foll...
python
def store_fit_results(self, results_dict): """ Parameters ---------- results_dict : dict. The estimation result dictionary that is output from scipy.optimize.minimize. In addition to the standard keys which are included, it should also contain the foll...
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Parameters ---------- results_dict : dict. The estimation result dictionary that is output from scipy.optimize.minimize. In addition to the standard keys which are included, it should also contain the following keys: `["final_gradient", "final_hessian", "fi...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model.fit_mle
def fit_mle(self, init_vals, print_res=True, method="BFGS", loss_tol=1e-06, gradient_tol=1e-06, maxiter=1000, ridge=None, *args): """ Parameters ---------- init...
python
def fit_mle(self, init_vals, print_res=True, method="BFGS", loss_tol=1e-06, gradient_tol=1e-06, maxiter=1000, ridge=None, *args): """ Parameters ---------- init...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model.print_summaries
def print_summaries(self): """ Returns None. Will print the measures of fit and the estimation results for the model. """ if hasattr(self, "fit_summary") and hasattr(self, "summary"): print("\n") print(self.fit_summary) print("=" * 30) ...
python
def print_summaries(self): """ Returns None. Will print the measures of fit and the estimation results for the model. """ if hasattr(self, "fit_summary") and hasattr(self, "summary"): print("\n") print(self.fit_summary) print("=" * 30) ...
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train
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model.conf_int
def conf_int(self, alpha=0.05, coefs=None, return_df=False): """ Creates the dataframe or array of lower and upper bounds for the (1-alpha)% confidence interval of the estimated parameters. Used when creating the statsmodels summary. Parameters ---------- alpha :...
python
def conf_int(self, alpha=0.05, coefs=None, return_df=False): """ Creates the dataframe or array of lower and upper bounds for the (1-alpha)% confidence interval of the estimated parameters. Used when creating the statsmodels summary. Parameters ---------- alpha :...
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Creates the dataframe or array of lower and upper bounds for the (1-alpha)% confidence interval of the estimated parameters. Used when creating the statsmodels summary. Parameters ---------- alpha : float, optional. Should be between 0.0 and 1.0. Determines the (1-al...
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train
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model.get_statsmodels_summary
def get_statsmodels_summary(self, title=None, alpha=.05): """ Parameters ---------- title : str, or None, optional. Will be the title of the returned summary. If None, the default title is used. ...
python
def get_statsmodels_summary(self, title=None, alpha=.05): """ Parameters ---------- title : str, or None, optional. Will be the title of the returned summary. If None, the default title is used. ...
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train
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model.check_param_list_validity
def check_param_list_validity(self, param_list): """ Parameters ---------- param_list : list. Contains four elements, each being a numpy array. Either all of the arrays should be 1D or all of the arrays should be 2D. If 2D, the arrays should have the s...
python
def check_param_list_validity(self, param_list): """ Parameters ---------- param_list : list. Contains four elements, each being a numpy array. Either all of the arrays should be 1D or all of the arrays should be 2D. If 2D, the arrays should have the s...
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train
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model.predict
def predict(self, data, param_list=None, return_long_probs=True, choice_col=None, num_draws=None, seed=None): """ Parameters ---------- data : string or pandas dataframe. If string...
python
def predict(self, data, param_list=None, return_long_probs=True, choice_col=None, num_draws=None, seed=None): """ Parameters ---------- data : string or pandas dataframe. If string...
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timothyb0912/pylogit
pylogit/base_multinomial_cm_v2.py
MNDC_Model.to_pickle
def to_pickle(self, filepath): """ Parameters ---------- filepath : str. Should end in .pkl. If it does not, ".pkl" will be appended to the passed string. Returns ------- None. Saves the model object to the location specified by `filepath`...
python
def to_pickle(self, filepath): """ Parameters ---------- filepath : str. Should end in .pkl. If it does not, ".pkl" will be appended to the passed string. Returns ------- None. Saves the model object to the location specified by `filepath`...
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taskcluster/json-e
jsone/prattparser.py
prefix
def prefix(*kinds): """Decorate a method as handling prefix tokens of the given kinds""" def wrap(fn): try: fn.prefix_kinds.extend(kinds) except AttributeError: fn.prefix_kinds = list(kinds) return fn return wrap
python
def prefix(*kinds): """Decorate a method as handling prefix tokens of the given kinds""" def wrap(fn): try: fn.prefix_kinds.extend(kinds) except AttributeError: fn.prefix_kinds = list(kinds) return fn return wrap
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taskcluster/json-e
jsone/prattparser.py
infix
def infix(*kinds): """Decorate a method as handling infix tokens of the given kinds""" def wrap(fn): try: fn.infix_kinds.extend(kinds) except AttributeError: fn.infix_kinds = list(kinds) return fn return wrap
python
def infix(*kinds): """Decorate a method as handling infix tokens of the given kinds""" def wrap(fn): try: fn.infix_kinds.extend(kinds) except AttributeError: fn.infix_kinds = list(kinds) return fn return wrap
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taskcluster/json-e
jsone/prattparser.py
ParseContext.attempt
def attempt(self, *kinds): """Try to get the next token if it matches one of the kinds given, otherwise returning None. If no kinds are given, any kind is accepted.""" if self._error: raise self._error token = self.next_token if not token: return N...
python
def attempt(self, *kinds): """Try to get the next token if it matches one of the kinds given, otherwise returning None. If no kinds are given, any kind is accepted.""" if self._error: raise self._error token = self.next_token if not token: return N...
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taskcluster/json-e
jsone/prattparser.py
ParseContext.require
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python
def require(self, *kinds): """Get the next token, raising an exception if it doesn't match one of the given kinds, or the input ends. If no kinds are given, returns the next token of any kind.""" token = self.attempt() if not token: raise SyntaxError('Unexpected end o...
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amzn/ion-python
amazon/ion/symbols.py
local_symbol_table
def local_symbol_table(imports=None, symbols=()): """Constructs a local symbol table. Args: imports (Optional[SymbolTable]): Shared symbol tables to import. symbols (Optional[Iterable[Unicode]]): Initial local symbols to add. Returns: SymbolTable: A mutable local symbol table with ...
python
def local_symbol_table(imports=None, symbols=()): """Constructs a local symbol table. Args: imports (Optional[SymbolTable]): Shared symbol tables to import. symbols (Optional[Iterable[Unicode]]): Initial local symbols to add. Returns: SymbolTable: A mutable local symbol table with ...
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amzn/ion-python
amazon/ion/symbols.py
shared_symbol_table
def shared_symbol_table(name, version, symbols, imports=None): """Constructs a shared symbol table. Args: name (unicode): The name of the shared symbol table. version (int): The version of the shared symbol table. symbols (Iterable[unicode]): The symbols to associate with the table. ...
python
def shared_symbol_table(name, version, symbols, imports=None): """Constructs a shared symbol table. Args: name (unicode): The name of the shared symbol table. version (int): The version of the shared symbol table. symbols (Iterable[unicode]): The symbols to associate with the table. ...
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train
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amzn/ion-python
amazon/ion/symbols.py
placeholder_symbol_table
def placeholder_symbol_table(name, version, max_id): """Constructs a shared symbol table that consists symbols that all have no known text. This is generally used for cases where a shared symbol table is not available by the application. Args: name (unicode): The name of the shared symbol tabl...
python
def placeholder_symbol_table(name, version, max_id): """Constructs a shared symbol table that consists symbols that all have no known text. This is generally used for cases where a shared symbol table is not available by the application. Args: name (unicode): The name of the shared symbol tabl...
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amzn/ion-python
amazon/ion/symbols.py
substitute_symbol_table
def substitute_symbol_table(table, version, max_id): """Substitutes a given shared symbol table for another version. * If the given table has **more** symbols than the requested substitute, then the generated symbol table will be a subset of the given table. * If the given table has **less** symbols ...
python
def substitute_symbol_table(table, version, max_id): """Substitutes a given shared symbol table for another version. * If the given table has **more** symbols than the requested substitute, then the generated symbol table will be a subset of the given table. * If the given table has **less** symbols ...
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amzn/ion-python
amazon/ion/symbols.py
SymbolTable.__add
def __add(self, token): """Unconditionally adds a token to the table.""" self.__symbols.append(token) text = token.text if text is not None and text not in self.__mapping: self.__mapping[text] = token
python
def __add(self, token): """Unconditionally adds a token to the table.""" self.__symbols.append(token) text = token.text if text is not None and text not in self.__mapping: self.__mapping[text] = token
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train
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amzn/ion-python
amazon/ion/symbols.py
SymbolTable.__add_shared
def __add_shared(self, original_token): """Adds a token, normalizing the SID and import reference to this table.""" sid = self.__new_sid() token = SymbolToken(original_token.text, sid, self.__import_location(sid)) self.__add(token) return token
python
def __add_shared(self, original_token): """Adds a token, normalizing the SID and import reference to this table.""" sid = self.__new_sid() token = SymbolToken(original_token.text, sid, self.__import_location(sid)) self.__add(token) return token
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amzn/ion-python
amazon/ion/symbols.py
SymbolTable.__add_import
def __add_import(self, original_token): """Adds a token, normalizing only the SID""" sid = self.__new_sid() token = SymbolToken(original_token.text, sid, original_token.location) self.__add(token) return token
python
def __add_import(self, original_token): """Adds a token, normalizing only the SID""" sid = self.__new_sid() token = SymbolToken(original_token.text, sid, original_token.location) self.__add(token) return token
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train
https://github.com/amzn/ion-python/blob/0b21fa3ba7755f55f745e4aa970d86343b82449d/amazon/ion/symbols.py#L227-L232
amzn/ion-python
amazon/ion/symbols.py
SymbolTable.__add_text
def __add_text(self, text): """Adds the given Unicode text as a locally defined symbol.""" if text is not None and not isinstance(text, six.text_type): raise TypeError('Local symbol definition must be a Unicode sequence or None: %r' % text) sid = self.__new_sid() location = N...
python
def __add_text(self, text): """Adds the given Unicode text as a locally defined symbol.""" if text is not None and not isinstance(text, six.text_type): raise TypeError('Local symbol definition must be a Unicode sequence or None: %r' % text) sid = self.__new_sid() location = N...
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Adds the given Unicode text as a locally defined symbol.
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train
https://github.com/amzn/ion-python/blob/0b21fa3ba7755f55f745e4aa970d86343b82449d/amazon/ion/symbols.py#L234-L244
amzn/ion-python
amazon/ion/symbols.py
SymbolTable.intern
def intern(self, text): """Interns the given Unicode sequence into the symbol table. Note: This operation is only valid on local symbol tables. Args: text (unicode): The target to intern. Returns: SymbolToken: The mapped symbol token which may alrea...
python
def intern(self, text): """Interns the given Unicode sequence into the symbol table. Note: This operation is only valid on local symbol tables. Args: text (unicode): The target to intern. Returns: SymbolToken: The mapped symbol token which may alrea...
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train
https://github.com/amzn/ion-python/blob/0b21fa3ba7755f55f745e4aa970d86343b82449d/amazon/ion/symbols.py#L246-L266
amzn/ion-python
amazon/ion/symbols.py
SymbolTable.get
def get(self, key, default=None): """Returns a token by text or local ID, with a default. A given text image may be associated with more than one symbol ID. This will return the first definition. Note: User defined symbol IDs are always one-based. Symbol zero is a special symbol ...
python
def get(self, key, default=None): """Returns a token by text or local ID, with a default. A given text image may be associated with more than one symbol ID. This will return the first definition. Note: User defined symbol IDs are always one-based. Symbol zero is a special symbol ...
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Returns a token by text or local ID, with a default. A given text image may be associated with more than one symbol ID. This will return the first definition. Note: User defined symbol IDs are always one-based. Symbol zero is a special symbol that always has no text. ...
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train
https://github.com/amzn/ion-python/blob/0b21fa3ba7755f55f745e4aa970d86343b82449d/amazon/ion/symbols.py#L268-L297
amzn/ion-python
amazon/ion/symbols.py
SymbolTableCatalog.register
def register(self, table): """Adds a shared table to the catalog. Args: table (SymbolTable): A non-system, shared symbol table. """ if table.table_type.is_system: raise ValueError('Cannot add system table to catalog') if not table.table_type.is_shared: ...
python
def register(self, table): """Adds a shared table to the catalog. Args: table (SymbolTable): A non-system, shared symbol table. """ if table.table_type.is_system: raise ValueError('Cannot add system table to catalog') if not table.table_type.is_shared: ...
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amzn/ion-python
amazon/ion/symbols.py
SymbolTableCatalog.resolve
def resolve(self, name, version, max_id): """Resolves the table for a given name and version. Args: name (unicode): The name of the table to resolve. version (int): The version of the table to resolve. max_id (Optional[int]): The maximum ID of the table requested. ...
python
def resolve(self, name, version, max_id): """Resolves the table for a given name and version. Args: name (unicode): The name of the table to resolve. version (int): The version of the table to resolve. max_id (Optional[int]): The maximum ID of the table requested. ...
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Resolves the table for a given name and version. Args: name (unicode): The name of the table to resolve. version (int): The version of the table to resolve. max_id (Optional[int]): The maximum ID of the table requested. May be ``None`` in which case an exact ...
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train
https://github.com/amzn/ion-python/blob/0b21fa3ba7755f55f745e4aa970d86343b82449d/amazon/ion/symbols.py#L518-L564
amzn/ion-python
amazon/ion/writer_buffer.py
BufferTree.start_container
def start_container(self): """Add a node to the tree that represents the start of a container. Until end_container is called, any nodes added through add_scalar_value or start_container will be children of this new node. """ self.__container_lengths.append(self.current_container...
python
def start_container(self): """Add a node to the tree that represents the start of a container. Until end_container is called, any nodes added through add_scalar_value or start_container will be children of this new node. """ self.__container_lengths.append(self.current_container...
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amzn/ion-python
amazon/ion/writer_buffer.py
BufferTree.end_container
def end_container(self, header_buf): """Add a node containing the container's header to the current subtree. This node will be added as the leftmost leaf of the subtree that was started by the matching call to start_container. Args: header_buf (bytearray): bytearray contain...
python
def end_container(self, header_buf): """Add a node containing the container's header to the current subtree. This node will be added as the leftmost leaf of the subtree that was started by the matching call to start_container. Args: header_buf (bytearray): bytearray contain...
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Add a node containing the container's header to the current subtree. This node will be added as the leftmost leaf of the subtree that was started by the matching call to start_container. Args: header_buf (bytearray): bytearray containing the container header.
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train
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amzn/ion-python
amazon/ion/writer_buffer.py
BufferTree.add_scalar_value
def add_scalar_value(self, value_buf): """Add a node to the tree containing a scalar value. Args: value_buf (bytearray): bytearray containing the scalar value. """ self.__container_node.add_child(_Node(value_buf)) self.current_container_length += len(value_buf)
python
def add_scalar_value(self, value_buf): """Add a node to the tree containing a scalar value. Args: value_buf (bytearray): bytearray containing the scalar value. """ self.__container_node.add_child(_Node(value_buf)) self.current_container_length += len(value_buf)
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Add a node to the tree containing a scalar value. Args: value_buf (bytearray): bytearray containing the scalar value.
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train
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amzn/ion-python
amazon/ion/writer_buffer.py
BufferTree.drain
def drain(self): """Walk the BufferTree and reset it when finished. Yields: any: The current node's value. """ if self.__container_nodes: raise ValueError("Attempted to drain without ending all containers.") for buf in self.__depth_traverse(self.__root): ...
python
def drain(self): """Walk the BufferTree and reset it when finished. Yields: any: The current node's value. """ if self.__container_nodes: raise ValueError("Attempted to drain without ending all containers.") for buf in self.__depth_traverse(self.__root): ...
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Walk the BufferTree and reset it when finished. Yields: any: The current node's value.
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train
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amzn/ion-python
amazon/ion/equivalence.py
ion_equals
def ion_equals(a, b, timestamps_instants_only=False): """Tests two objects for equivalence under the Ion data model. There are three important cases: * When neither operand specifies its `ion_type` or `annotations`, this method will only return True when the values of both operands are equiva...
python
def ion_equals(a, b, timestamps_instants_only=False): """Tests two objects for equivalence under the Ion data model. There are three important cases: * When neither operand specifies its `ion_type` or `annotations`, this method will only return True when the values of both operands are equiva...
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Tests two objects for equivalence under the Ion data model. There are three important cases: * When neither operand specifies its `ion_type` or `annotations`, this method will only return True when the values of both operands are equivalent under the Ion data model. * When only one of the...
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train
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amzn/ion-python
amazon/ion/equivalence.py
_ion_equals
def _ion_equals(a, b, timestamp_comparison_func, recursive_comparison_func): """Compares a and b according to the description of the ion_equals method.""" for a, b in ((a, b), (b, a)): # Ensures that operand order does not matter. if isinstance(a, _IonNature): if isinstance(b, _IonNature): ...
python
def _ion_equals(a, b, timestamp_comparison_func, recursive_comparison_func): """Compares a and b according to the description of the ion_equals method.""" for a, b in ((a, b), (b, a)): # Ensures that operand order does not matter. if isinstance(a, _IonNature): if isinstance(b, _IonNature): ...
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train
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amzn/ion-python
amazon/ion/equivalence.py
_timestamps_eq
def _timestamps_eq(a, b): """Compares two timestamp operands for equivalence under the Ion data model.""" assert isinstance(a, datetime) if not isinstance(b, datetime): return False # Local offsets must be equivalent. if (a.tzinfo is None) ^ (b.tzinfo is None): return False if a....
python
def _timestamps_eq(a, b): """Compares two timestamp operands for equivalence under the Ion data model.""" assert isinstance(a, datetime) if not isinstance(b, datetime): return False # Local offsets must be equivalent. if (a.tzinfo is None) ^ (b.tzinfo is None): return False if a....
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amzn/ion-python
amazon/ion/equivalence.py
_timestamp_instants_eq
def _timestamp_instants_eq(a, b): """Compares two timestamp operands for point-in-time equivalence only.""" assert isinstance(a, datetime) if not isinstance(b, datetime): return False # datetime's __eq__ can't compare a None offset and a non-None offset. For these equivalence semantics, a None ...
python
def _timestamp_instants_eq(a, b): """Compares two timestamp operands for point-in-time equivalence only.""" assert isinstance(a, datetime) if not isinstance(b, datetime): return False # datetime's __eq__ can't compare a None offset and a non-None offset. For these equivalence semantics, a None ...
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