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- protenix_json/7xic_K_L_B.json +176 -0
- protenix_json/8r1c_H_L_A.json +184 -0
- protenix_json/8r40_A_a_C.json +75 -0
- protenix_json/8r9y_B_C_A.json +104 -0
- protenix_json/8r9z_H_L_A.json +104 -0
- protenix_json/8rh0_H_L_A.json +104 -0
- protenix_json/8rz1_A_a_B.json +59 -0
- protenix_json/8rz2_B_C_A.json +96 -0
- protenix_json/8s61_B__A.json +43 -0
- protenix_json/8sgi_H_L_A.json +72 -0
- protenix_json/8sgt_H_L_A.json +72 -0
- protenix_json/8sit_H_L_A.json +112 -0
- protenix_json/8smm_H_L_A.json +64 -0
- protenix_json/8smp_H_L_A.json +64 -0
- protenix_json/8t03_C_D_A.json +64 -0
- protenix_json/8tga_E_F_B.json +104 -0
- protenix_json/8tkc_G_H_AB.json +173 -0
- protenix_json/8tl5_G_H_AB.json +173 -0
- protenix_json/8tnj_D_C_A.json +104 -0
- protenix_json/8tp4_H_L_C.json +112 -0
- protenix_json/8tp7_D_F_A.json +112 -0
- protenix_json/8tq9_H_L_AB.json +117 -0
- protenix_json/8tqi_H_L_B.json +120 -0
- protenix_json/8ty1_C_B_A.json +136 -0
- protenix_json/8tzu_C__B.json +125 -0
- protenix_json/8u1c_H_L_A.json +128 -0
- protenix_json/8u31_C_B_A.json +96 -0
- protenix_json/8u5l_J_j_A.json +51 -0
- protenix_json/8ukh_H_L_A.json +80 -0
- protenix_json/8ulj_H_L_AB.json +149 -0
- protenix_json/8uo9_B__A.json +33 -0
- protenix_json/8uoa_B__A.json +33 -0
- protenix_json/8ut2_H_G_AB.json +117 -0
- protenix_json/8uwz_C_D_F.json +104 -0
- protenix_json/8vuh_H_L_A.json +112 -0
- protenix_json/8vuq_G_I_A.json +88 -0
- protenix_json/8vuy_H_L_A.json +88 -0
- protenix_json/8vvk_D_C_B.json +112 -0
- protenix_json/8w0y_A_B_D.json +152 -0
- protenix_json/8w9j_H_L_C.json +112 -0
- protenix_json/8wej_H_L_B.json +72 -0
- protenix_json/8wo4_B_A_F.json +138 -0
- protenix_json/8wz3_D_F_A.json +128 -0
- protenix_json/8wze_H_L_C.json +80 -0
- protenix_json/8xs3_A_B_C.json +96 -0
- protenix_json/8y0r_H_L_2.json +72 -0
- protenix_json/8yww_E_D_A.json +184 -0
- protenix_json/8yz5_G_K_D.json +160 -0
- protenix_json/9axl_H_L_B.json +176 -0
- protenix_json/9ctu_D_C_A.json +80 -0
protenix_json/7xic_K_L_B.json
ADDED
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@@ -0,0 +1,176 @@
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| 1 |
+
[
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| 2 |
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{
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| 3 |
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"sequences": [
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| 4 |
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{
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| 5 |
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"proteinChain": {
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"sequence": "MFVFLVLLPLVSSQCVNLTTRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHVISGTNGTKRFDNPVLPFNDGVYFASIEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPIIVREPEDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNLAPFFTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVSGNYNYLYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGFNCYFPLRSYSFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLKGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQTQTKSHGSASSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFKGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDIFSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQGSGYIPEAPRDGQAYVRKDGEWVLLSTFLLEGSDEVDAGSHHHHHHHHHHGSVEDYKDDDDK",
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"B"
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"B"
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| 14 |
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| 15 |
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}
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| 16 |
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},
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| 17 |
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{
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| 18 |
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"proteinChain": {
|
| 19 |
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"sequence": "EVQLVESGGGVVRPGGSLRLSCAASGFTFDDYGMSWVRQAPGKGLEWVSGINWNGGSTGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYHCARVGYCGGDCYSLSLAGFPDYWGQGTLVTVSSE",
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| 30 |
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{
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| 31 |
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"proteinChain": {
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| 32 |
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"sequence": "EIVMTQSPATLSVSPGERATLSCRASQSVSYNLAWYQQKPGQAPRLLIYDASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPYTFGQGTKLEIK",
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"count": 1,
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"I"
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"L"
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| 100 |
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| 132 |
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| 140 |
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| 141 |
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{
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| 142 |
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| 143 |
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| 148 |
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| 149 |
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{
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| 150 |
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|
| 151 |
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|
| 152 |
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| 153 |
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|
| 154 |
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|
| 155 |
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|
| 156 |
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|
| 157 |
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{
|
| 158 |
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|
| 159 |
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|
| 160 |
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|
| 161 |
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|
| 162 |
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|
| 163 |
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|
| 164 |
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|
| 165 |
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{
|
| 166 |
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|
| 167 |
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|
| 168 |
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| 169 |
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|
| 170 |
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|
| 171 |
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"atom2": "SG"
|
| 172 |
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}
|
| 173 |
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],
|
| 174 |
+
"name": "7xic_K_L_B"
|
| 175 |
+
}
|
| 176 |
+
]
|
protenix_json/8r1c_H_L_A.json
ADDED
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@@ -0,0 +1,184 @@
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
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{
|
| 3 |
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|
| 4 |
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|
| 5 |
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|
| 6 |
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| 12 |
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| 13 |
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|
| 14 |
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| 15 |
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|
| 16 |
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| 17 |
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|
| 18 |
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|
| 19 |
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| 20 |
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| 21 |
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| 23 |
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| 24 |
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| 26 |
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| 27 |
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| 28 |
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| 29 |
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| 30 |
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|
| 31 |
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|
| 32 |
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| 33 |
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| 36 |
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| 39 |
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| 40 |
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| 41 |
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| 42 |
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| 43 |
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| 44 |
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| 68 |
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| 69 |
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| 70 |
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| 71 |
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| 72 |
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| 73 |
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| 74 |
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| 75 |
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| 76 |
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| 77 |
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| 78 |
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| 79 |
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| 80 |
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| 81 |
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| 82 |
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| 83 |
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| 84 |
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| 86 |
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| 94 |
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| 100 |
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| 102 |
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| 103 |
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| 105 |
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| 106 |
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| 109 |
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| 110 |
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| 114 |
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| 124 |
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| 125 |
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| 126 |
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| 129 |
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| 132 |
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| 133 |
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| 134 |
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| 135 |
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|
| 136 |
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| 137 |
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| 138 |
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|
| 139 |
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|
| 140 |
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|
| 141 |
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|
| 142 |
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|
| 143 |
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|
| 144 |
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|
| 145 |
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|
| 146 |
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|
| 147 |
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|
| 148 |
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|
| 149 |
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|
| 150 |
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|
| 151 |
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|
| 152 |
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|
| 153 |
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|
| 154 |
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|
| 155 |
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|
| 156 |
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| 157 |
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|
| 158 |
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|
| 159 |
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|
| 160 |
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|
| 161 |
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|
| 162 |
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|
| 163 |
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|
| 164 |
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|
| 165 |
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{
|
| 166 |
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|
| 167 |
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|
| 168 |
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|
| 169 |
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|
| 170 |
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|
| 171 |
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|
| 172 |
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|
| 173 |
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|
| 174 |
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|
| 175 |
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|
| 176 |
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|
| 177 |
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|
| 178 |
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|
| 179 |
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|
| 180 |
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|
| 181 |
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],
|
| 182 |
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"name": "8r1c_H_L_A"
|
| 183 |
+
}
|
| 184 |
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]
|
protenix_json/8r40_A_a_C.json
ADDED
|
@@ -0,0 +1,75 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "ETGEVQLVQSGAEVKKPGSSVKVSCKASGGTFNRYTVNWVRQAPGQGLEWMGGIIPIFGTANYAQRFQGRLTITADESTSTAYMELSSLRSDDTAVYFCARENLDNSGTYYYFSGWFDPWGQGTLVTVSSQSALTQPRSVSGSPGQSVTISCTGTSSDIGGYNFVSWYQQHPGKAPKLMIYDATKRPSGVPDRFSGSKSGNTASLTISGLQAEDEADYYCCSYAGDYTPGVVFGGGTKLTVLGQPKAAPSVTLGTKHHHHHH",
|
| 7 |
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|
| 8 |
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|
| 9 |
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|
| 10 |
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|
| 11 |
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|
| 12 |
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|
| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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{
|
| 18 |
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"proteinChain": {
|
| 19 |
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"sequence": "ETGEDEGCTNLSEFSYMELKVGYISAIKVGGGNPRPRTPCDIFTNSRGKRASKGNKTCGFVDERGLYKSLKGACRLKLCGVLGLRLMDGTWVAMQTSDETKWCPPDQLVNLHDGTKHHHHHH",
|
| 20 |
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|
| 21 |
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|
| 22 |
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| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
+
]
|
| 28 |
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}
|
| 29 |
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|
| 30 |
+
],
|
| 31 |
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"covalent_bonds": [
|
| 32 |
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{
|
| 33 |
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|
| 34 |
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|
| 35 |
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|
| 36 |
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|
| 37 |
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|
| 38 |
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|
| 39 |
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|
| 40 |
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| 41 |
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|
| 42 |
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|
| 43 |
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| 44 |
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|
| 45 |
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|
| 46 |
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|
| 47 |
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|
| 48 |
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{
|
| 49 |
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|
| 50 |
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|
| 51 |
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|
| 52 |
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|
| 53 |
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|
| 54 |
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|
| 55 |
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|
| 56 |
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{
|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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|
| 61 |
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|
| 62 |
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|
| 63 |
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|
| 64 |
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{
|
| 65 |
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|
| 66 |
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|
| 67 |
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|
| 68 |
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|
| 69 |
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|
| 70 |
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|
| 71 |
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}
|
| 72 |
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],
|
| 73 |
+
"name": "8r40_A_a_C"
|
| 74 |
+
}
|
| 75 |
+
]
|
protenix_json/8r9y_B_C_A.json
ADDED
|
@@ -0,0 +1,104 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "MPMGSLQPLATLYLLGMLVASVLATLPKLPELEVVQLNISAHMDFGEARLDSVTINGNTSYCVTKPYFRLETNFMCTGCTMNLRTDTCSFDLSAVNNGMSFSQFCLSTESGACEMKIIVTYVWNYLLRQRLYVTAVEGQTHTGTTSVHATDTDPDYKDDDDKAGPGWSHPQFEKGGGSGGGSGGGSWSHPQFEKGGGSGGGSGGGSWSHPQFEK",
|
| 7 |
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|
| 8 |
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|
| 9 |
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|
| 10 |
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|
| 11 |
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|
| 12 |
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|
| 13 |
+
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|
| 14 |
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]
|
| 15 |
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}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
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|
| 19 |
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"sequence": "VQLVQSGAEVKKPGSSVKVSCKASGGTFSSLAISWVRQAPGQGLEWMGGIIPTFGTTNYAQNFRGRVTITADKSTSTAYMELSTLISEDTAVYFCARERSTDTWPGDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLLGQTYICNVNHKPSNTKVDKKVEPK",
|
| 20 |
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| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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{
|
| 31 |
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"proteinChain": {
|
| 32 |
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"sequence": "EILMTQSPATLSVSPGERATLSCWASQSVNSKLAWYQQKPGQAPRLLIYDTSTRATGIPARFSGSGSGAEFTLTISSLQSEDFAVYYCQQYNYWPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF",
|
| 33 |
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| 34 |
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|
| 35 |
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| 36 |
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|
| 37 |
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|
| 38 |
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|
| 39 |
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|
| 40 |
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|
| 41 |
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|
| 42 |
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|
| 43 |
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|
| 44 |
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|
| 45 |
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|
| 46 |
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| 47 |
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|
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|
| 49 |
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|
| 50 |
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|
| 51 |
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|
| 52 |
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|
| 53 |
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{
|
| 54 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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|
| 61 |
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|
| 62 |
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|
| 63 |
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|
| 64 |
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|
| 65 |
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|
| 66 |
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|
| 67 |
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|
| 68 |
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|
| 69 |
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|
| 70 |
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|
| 71 |
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|
| 72 |
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|
| 73 |
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|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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{
|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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|
| 82 |
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|
| 83 |
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|
| 84 |
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|
| 85 |
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{
|
| 86 |
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|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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{
|
| 94 |
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|
| 95 |
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|
| 96 |
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|
| 97 |
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|
| 98 |
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|
| 99 |
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|
| 100 |
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}
|
| 101 |
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],
|
| 102 |
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"name": "8r9y_B_C_A"
|
| 103 |
+
}
|
| 104 |
+
]
|
protenix_json/8r9z_H_L_A.json
ADDED
|
@@ -0,0 +1,104 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "LEVVQLNISAHMDFGEARLDSVTINGNTSYCVTKPYFRLETNFMCTGCTMNLRTDTCSFDLSAVNNGMSFSQFCLSTESGACEMKIIVTYVWNYLLRQRLYVTAVEGQTHTGTT",
|
| 7 |
+
"count": 1,
|
| 8 |
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"label_entity_id": "1",
|
| 9 |
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"label_asym_id": [
|
| 10 |
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"A"
|
| 11 |
+
],
|
| 12 |
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"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
+
]
|
| 15 |
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}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "QVQLVESGGGVVQPGRSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVAVIWRDGSNEFYADSVKGRFTISRDNSKDTLYLQMNSLRAEDTAVYYCARRGIIMVRGLLGYWGQGTLVTVSSASTKGPSVFPLAPSSKSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK",
|
| 20 |
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"count": 1,
|
| 21 |
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"label_entity_id": "4",
|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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}
|
| 29 |
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},
|
| 30 |
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{
|
| 31 |
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"proteinChain": {
|
| 32 |
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"sequence": "DIQMTQSPPSLSASVGDRVTITCRASQGISNYLAWHQQKPGKVPKLLIYTASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNSAPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG",
|
| 33 |
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| 34 |
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|
| 35 |
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| 36 |
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|
| 37 |
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| 38 |
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| 39 |
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|
| 40 |
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|
| 41 |
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|
| 42 |
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|
| 43 |
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|
| 44 |
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| 45 |
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|
| 46 |
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|
| 47 |
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|
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|
| 49 |
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| 50 |
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|
| 51 |
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|
| 52 |
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| 53 |
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{
|
| 54 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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|
| 61 |
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{
|
| 62 |
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|
| 63 |
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|
| 64 |
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|
| 65 |
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|
| 66 |
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|
| 67 |
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|
| 68 |
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},
|
| 69 |
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{
|
| 70 |
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"entity1": 2,
|
| 71 |
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|
| 72 |
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|
| 73 |
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|
| 74 |
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|
| 75 |
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|
| 76 |
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},
|
| 77 |
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{
|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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|
| 82 |
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"position2": 201,
|
| 83 |
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"atom2": "SG"
|
| 84 |
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},
|
| 85 |
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{
|
| 86 |
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"entity1": 3,
|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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"position2": 88,
|
| 91 |
+
"atom2": "SG"
|
| 92 |
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},
|
| 93 |
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{
|
| 94 |
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"entity1": 3,
|
| 95 |
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|
| 96 |
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|
| 97 |
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|
| 98 |
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"position2": 194,
|
| 99 |
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"atom2": "SG"
|
| 100 |
+
}
|
| 101 |
+
],
|
| 102 |
+
"name": "8r9z_H_L_A"
|
| 103 |
+
}
|
| 104 |
+
]
|
protenix_json/8rh0_H_L_A.json
ADDED
|
@@ -0,0 +1,104 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "MRQGAPARGCRWFVVWALLGLTLGVLVASAAPSSPGTPGVAAATQAANGGPATPAPPAPGPAPTGDTKPKKNKKPKNPPPPRPAGDNATVAAGHATLREHLRDIKAENTDANFYVCPPPTGATVVQFEQPRRCPTRPEGQNYTEGIAVVFKENIAPYKFKATMYYKDVTVSQVWFGHRYSQFMGIFEDRAPVPFEEVIDKINAKGVCRSTAKYVRNNLETTAFHRDDHETDMELKPANAATRTSRGWHTTDLKYNPSRVEAFHRYGTTVNCIVEEVDARSVYPYDEFVLATGDFVYMSPFYGYREGSHTEHTSYAADRFKQVDGFYARDLTTKARATAPTTRNLLTTPKFTVAWDWVPKRPSVCTMTKWQEVDEMLRSEYGGSFRFSSDAISTTFTTNLTEYPLSRVDLGDCIGKDARDAMDRIFARRYNATHIKVGQPQYYLANGGFLIAYQPLLSNTLAELYVREHLREQSRKPPNPTPPPPGASANASVERIKTTSSIEFARLQFTYNHIQRHVNDMLGRVAIAWCELQNHELTLWNEARKLNPNAIASATVGRRVSARMLGDVMAVSTCVPVAADNVIVQNSMRISSRPGACYSRPLVSFRYEDQGPLVEGQLGENNELRLTRDAIEPCTVGHRRYFTFGGGYVYFEEYAYSHQLSRADITTVSTFIDLNITMLEDHEFVPLEVYTRHEIKDSGLLDYTEVQRRNQLHDLRFADIDTVIHADANAAMFAGLGAFFEGMGDLGRAVGKVVMGIVGGVVSAVSGVSSFMSNPFGALAVGLLVLAGLAAAFFAFRYVMRLQSNPMKALYPLTTKELKNPTNPDASGEGEEGGDFDEAKLAEAREMIRYMALVSAMEHTEHKAKKKGTSALLSAKVTDMVMRKRRNTNYTQVPNKDGDADEDDLAA",
|
| 7 |
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| 8 |
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|
| 9 |
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| 10 |
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|
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| 12 |
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| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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{
|
| 18 |
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|
| 19 |
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"sequence": "EVQLVQSGAEVKTPGASVRVSCKASGHTFRTFDINWVRQAAGQGLEWMGWMSPNSGNTGYARQFQGRVTMTRNISANTAYMELRGLRFDDTAVYYCARGPGSTGTTGSMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK",
|
| 20 |
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| 21 |
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|
| 22 |
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| 23 |
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| 24 |
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| 25 |
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| 26 |
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| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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{
|
| 31 |
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"proteinChain": {
|
| 32 |
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"sequence": "QAGLTQPPSVSVAPGKTARISCGGNNIGSKSVHWYQQKPGQAPVLVIYYDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSGSVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS",
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| 33 |
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| 35 |
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|
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| 44 |
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{
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{
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{
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| 80 |
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"atom1": "SG",
|
| 81 |
+
"entity2": 1,
|
| 82 |
+
"position2": 633,
|
| 83 |
+
"atom2": "SG"
|
| 84 |
+
},
|
| 85 |
+
{
|
| 86 |
+
"entity1": 2,
|
| 87 |
+
"position1": 22,
|
| 88 |
+
"atom1": "SG",
|
| 89 |
+
"entity2": 2,
|
| 90 |
+
"position2": 96,
|
| 91 |
+
"atom2": "SG"
|
| 92 |
+
},
|
| 93 |
+
{
|
| 94 |
+
"entity1": 3,
|
| 95 |
+
"position1": 22,
|
| 96 |
+
"atom1": "SG",
|
| 97 |
+
"entity2": 3,
|
| 98 |
+
"position2": 87,
|
| 99 |
+
"atom2": "SG"
|
| 100 |
+
}
|
| 101 |
+
],
|
| 102 |
+
"name": "8rh0_H_L_A"
|
| 103 |
+
}
|
| 104 |
+
]
|
protenix_json/8rz1_A_a_B.json
ADDED
|
@@ -0,0 +1,59 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "MGILPSPGMPALLSLVSLLSVLLMGCVAETGEVQLVESGGGLVQPGGSLRLSCAASGFTFNTYWMSWVRQAPGKGLEWVANIQQDGSEKDYLNSVRGRFTISRDNAKKSLYLQMNSLRAEDTAVYYCARDNPASAVAFDVWGQGAMVTVSSGGGGSGGGGSGGGGSQSALTQPPSVSEAPRRRVTIYCSGSSSNIGNNAVSWYQQLPGKSPKLLIYFDDLVTSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDRLNGVVFGGGTKLTVLGTKHHHHHH",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "GGSGSYQDVCRKAKEKLDKIEMDAKNYETNLKEQANNADKTEEYRKKKKIAIEAFLKKIEEAADKVAREAKQRLDELEKKNQVDKEELEKCKEEVEKRARELRRRIREILERAKKWLDQ",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "2",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"B"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"B"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
}
|
| 30 |
+
],
|
| 31 |
+
"covalent_bonds": [
|
| 32 |
+
{
|
| 33 |
+
"entity1": 1,
|
| 34 |
+
"position1": 53,
|
| 35 |
+
"atom1": "SG",
|
| 36 |
+
"entity2": 1,
|
| 37 |
+
"position2": 127,
|
| 38 |
+
"atom2": "SG"
|
| 39 |
+
},
|
| 40 |
+
{
|
| 41 |
+
"entity1": 1,
|
| 42 |
+
"position1": 188,
|
| 43 |
+
"atom1": "SG",
|
| 44 |
+
"entity2": 1,
|
| 45 |
+
"position2": 255,
|
| 46 |
+
"atom2": "SG"
|
| 47 |
+
},
|
| 48 |
+
{
|
| 49 |
+
"entity1": 2,
|
| 50 |
+
"position1": 10,
|
| 51 |
+
"atom1": "SG",
|
| 52 |
+
"entity2": 2,
|
| 53 |
+
"position2": 91,
|
| 54 |
+
"atom2": "SG"
|
| 55 |
+
}
|
| 56 |
+
],
|
| 57 |
+
"name": "8rz1_A_a_B"
|
| 58 |
+
}
|
| 59 |
+
]
|
protenix_json/8rz2_B_C_A.json
ADDED
|
@@ -0,0 +1,96 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "MIRIKKKLILTIIYIHLFILNRLSFENAIKKTKNQENNLTLLPIKSTEEEKDDIKNGKDIKKEIDNDKENIKTNNAKDHSTYIKSYLNTNVNDGLKYLFIPSHNSFIKKYSVFNQINDGMLLNEKNDVKNNEDYKNVDYKNVNFLQYHFKELSNYNIANSIDILQEKEGHLDFVIIPHYTFLDYYKHLSYNSIYHKSSTYGKYIAVDAFIKKINEAYDKVKSKCNDIKNDLIATIKKLEHPYDINNKNDDSYRYDISEEIDDKSEETDDETEEVEDSIQDTDSNHTPSNKKKNDLMNRTFKKMMDEYNTKKKKLIKCIKNHENDFNKICMDMKNYGTNLFEQLSCYNNNFCNTNGIRYHYDEYIHKLILSVKSKNLNKDLSDMTNILQQSELLLTNLNKKMGSYIYIDTIKFIHKEMKHIFNRIEYHTKIINDKTKIIQDKIKLNIWRTFQKDELLKRILDMSNEYSLFITSDHLRQMLYNTFYSKEKHLNNIFHHLIYVLQMKFNDVPIKMEYFQTYKKNKPLTQ",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "MGWSCIILFLVATATGVHSEVQLVESGGGLVQPGGSLRLSCAASGFTFNTYWMSWVRQAPGKGLEWVANIQQDGSEKDYLNSVRGRFTISRDNAKKSLYLQMNSLRAEDTAVYYCARDNPASAVAFDVWGQGAMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCGKHHHHHH",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "2",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"B"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"B"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "MGWSCIILFLVATATGSWAQSALTQPPSVSEAPRRRVTIYCSGSSSNIGNNAVSWYQQLPGKSPKLLIYFDDLVTSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDRLNGVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS",
|
| 33 |
+
"count": 1,
|
| 34 |
+
"label_entity_id": "3",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"C"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"C"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
+
{
|
| 46 |
+
"entity1": 1,
|
| 47 |
+
"position1": 224,
|
| 48 |
+
"atom1": "SG",
|
| 49 |
+
"entity2": 1,
|
| 50 |
+
"position2": 317,
|
| 51 |
+
"atom2": "SG"
|
| 52 |
+
},
|
| 53 |
+
{
|
| 54 |
+
"entity1": 1,
|
| 55 |
+
"position1": 345,
|
| 56 |
+
"atom1": "SG",
|
| 57 |
+
"entity2": 1,
|
| 58 |
+
"position2": 351,
|
| 59 |
+
"atom2": "SG"
|
| 60 |
+
},
|
| 61 |
+
{
|
| 62 |
+
"entity1": 2,
|
| 63 |
+
"position1": 41,
|
| 64 |
+
"atom1": "SG",
|
| 65 |
+
"entity2": 2,
|
| 66 |
+
"position2": 115,
|
| 67 |
+
"atom2": "SG"
|
| 68 |
+
},
|
| 69 |
+
{
|
| 70 |
+
"entity1": 2,
|
| 71 |
+
"position1": 166,
|
| 72 |
+
"atom1": "SG",
|
| 73 |
+
"entity2": 2,
|
| 74 |
+
"position2": 222,
|
| 75 |
+
"atom2": "SG"
|
| 76 |
+
},
|
| 77 |
+
{
|
| 78 |
+
"entity1": 3,
|
| 79 |
+
"position1": 41,
|
| 80 |
+
"atom1": "SG",
|
| 81 |
+
"entity2": 3,
|
| 82 |
+
"position2": 108,
|
| 83 |
+
"atom2": "SG"
|
| 84 |
+
},
|
| 85 |
+
{
|
| 86 |
+
"entity1": 3,
|
| 87 |
+
"position1": 157,
|
| 88 |
+
"atom1": "SG",
|
| 89 |
+
"entity2": 3,
|
| 90 |
+
"position2": 216,
|
| 91 |
+
"atom2": "SG"
|
| 92 |
+
}
|
| 93 |
+
],
|
| 94 |
+
"name": "8rz2_B_C_A"
|
| 95 |
+
}
|
| 96 |
+
]
|
protenix_json/8s61_B__A.json
ADDED
|
@@ -0,0 +1,43 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "VQLVESGGGLVQPGDSLRLSCAASGRTFSINAMAWFRQAPGKEREYVAQISWTGGNTYYAESVKGRFTISRDNAKNTVYLQMISLKPEDTAVYYCAADSGGIRLGASRWNYWGQGTQVTVSS",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"B"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "SWIYPTVILCLFGFFSMMRPSEPFLIPYLSGPDKQLTSAEITNEIFPVWTYSYLVLLLPVFVLTDYVRYKPVIILQGISFIITWLLLLFGQGVKTMQVVEFFYGMVTAAEVAYYAYIYSVVSPEHYQRVSGYCRSVTLAAYTAGSVLAQLLVSLAQMSYFYLNVISLASVSVAFLFSLFLPMPKKSMFFHAKPSREIKKSSSVNPVLEETHEGEAPGCEEQKPTSEILSTSGKLNKGQLNSLKPSNVTVDVFVQWFQDLKECYSSKRLFYWSLWWAFATAGFNQVLNYVQILWDYKAPSQDSSIYNGAVEAIATFGGAVAAFAVGYVKVNWDLLGELALVVFSVVNAGSLFLMHYTANIWACYAGYLIFKSSYMLLITIAVFQIAVNLNVERYALVFGINTFIALVIQTIMTVIVVDQRGLNLPVSIQFLVYGSYFAVIAGIFLMRSMY",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "2",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"B"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"A"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
}
|
| 30 |
+
],
|
| 31 |
+
"covalent_bonds": [
|
| 32 |
+
{
|
| 33 |
+
"entity1": 1,
|
| 34 |
+
"position1": 21,
|
| 35 |
+
"atom1": "SG",
|
| 36 |
+
"entity2": 1,
|
| 37 |
+
"position2": 95,
|
| 38 |
+
"atom2": "SG"
|
| 39 |
+
}
|
| 40 |
+
],
|
| 41 |
+
"name": "8s61_B__A"
|
| 42 |
+
}
|
| 43 |
+
]
|
protenix_json/8sgi_H_L_A.json
ADDED
|
@@ -0,0 +1,72 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "MYNMRRLSLSPTFSMGFHLLVTVSLLFSHVDHVIAETEMEGEGNETGECTGSYYCKKGVILPIWEPQDPSFGDKIARATVYFVAMVYMFLGVSIIADRFMSSIEVITSQEKEITIKKPNGETTKTTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHNFTAGDLGPSTIVGSAAFNMFIIIALCVYVVPDGETRKIKHLRVFFVTAAWSIFAYTWLYIILSVISPGVVEVWEGLLTFFFFPICVVFAWVADRRLLFYKYVYKRYRAGKQRGMIIEHEGDRPSSKTEIEMDGKVVNSHVENFLDGALVLEVDERDQDDEEARREMARILKELKQKHPDKEIEQLIELANYQVLSQQQKSRAFYRIQATRLMTGATENDPVSKIFFEQGTYQCLENCGTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFKPGDTQKEIRVGIIDDDIFEEDENFLVHLSNVKVSSEASEDGILEANHVSTLACLGSPSTATVTIFDDDHAGIFTFEEPVTHVSESIGIMEVKVLRTSGARGNVIVPYKTIEGTARGGGEDFEDTCGELEFQNDEIVKTISVKVIDDEEYEKNKTFFLEIGEPRLVEMSEKKALLLNELGGFTITGKYLFGQPVFRKVHAREHPILSTVITIADEYDDKQPLTSKEEEERRIAEMGRPILGEHTKLEVIIEESYEFKSTVDKLIKKTNLALVVGTNSWREQFIEAITVSAGEDDDDDECGEEKLPSCFDYVMHFLTVFWKVLFAFVPPTEYWNGWACFIVSILMIGLLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHAANGEQFKVSPGTLAFSVTLFTIFAFINVGVLLYRRRPEIGGELGGPRTAKLLTSCLFVLLWLLYIFFSSLEAYCHIKGFAAAGGSWSHPQFEKGGGSGGGSGGSAWSHPQFEK",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRVPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEG",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "2",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"B"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"L"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "QVQLQQSGAELARPGASVKLSCKATGYSFTSYWMQWVKQRPGQGMEWIGAIYPGDVTSRYTQKFKGKATLTADKSSSTAFMQLRSLASEDSAVYYCARWSGYYGSSSFDYWGQGTTLTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTINPCPPCKECHKCPAPNLEGGPS",
|
| 33 |
+
"count": 1,
|
| 34 |
+
"label_entity_id": "3",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"C"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"H"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
+
{
|
| 46 |
+
"entity1": 1,
|
| 47 |
+
"position1": 55,
|
| 48 |
+
"atom1": "SG",
|
| 49 |
+
"entity2": 1,
|
| 50 |
+
"position2": 802,
|
| 51 |
+
"atom2": "SG"
|
| 52 |
+
},
|
| 53 |
+
{
|
| 54 |
+
"entity1": 2,
|
| 55 |
+
"position1": 22,
|
| 56 |
+
"atom1": "SG",
|
| 57 |
+
"entity2": 2,
|
| 58 |
+
"position2": 90,
|
| 59 |
+
"atom2": "SG"
|
| 60 |
+
},
|
| 61 |
+
{
|
| 62 |
+
"entity1": 3,
|
| 63 |
+
"position1": 22,
|
| 64 |
+
"atom1": "SG",
|
| 65 |
+
"entity2": 3,
|
| 66 |
+
"position2": 96,
|
| 67 |
+
"atom2": "SG"
|
| 68 |
+
}
|
| 69 |
+
],
|
| 70 |
+
"name": "8sgi_H_L_A"
|
| 71 |
+
}
|
| 72 |
+
]
|
protenix_json/8sgt_H_L_A.json
ADDED
|
@@ -0,0 +1,72 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "MYNMRRLSLSPTFSMGFHLLVTVSLLFSHVDHVIAETEMEGEGNETGECTGSYYCKKGVILPIWEPQDPSFGDKIARATVYFVAMVYMFLGVSIIADRFMSSIEVITSQEKEITIKKPNGETTKTTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHNFTAGDLGPSTIVGSAAFNMFIIIALCVYVVPDGETRKIKHLRVFFVTAAWSIFAYTWLYIILSVISPGVVEVWEGLLTFFFFPICVVFAWVADRRLLFYKYVYKRYRAGKQRGMIIEHEGDRPSSKTEIEMDGKVVNSHVENFLDGALVLEVDERDQDDEEARREMARILKELKQKHPDKEIEQLIELANYQVLSQQQKSRAFYRIQATRLMTGATENDPVSKIFFEQGTYQCLENCGTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFTEGTVVFKPGDTQKEIRVGIIDDDIFEEDENFLVHLSNVKVSSEASEDGILEANHVSTLACLGSPSTATVTIFDDDHAGIFTFEEPVTHVSESIGIMEVKVLRTSGARGNVIVPYKTIEGTARGGGEDFEDTCGELEFQNDEIVKTISVKVIDDEEYEKNKTFFLEIGEPRLVEMSEKKALLLNELGGFTITGKYLFGQPVFRKVHAREHPILSTVITIADEYDDKQPLTSKEEEERRIAEMGRPILGEHTKLEVIIEESYEFKSTVDKLIKKTNLALVVGTNSWREQFIEAITVSAGEDDDDDECGEEKLPSCFDYVMHFLTVFWKVLFAFVPPTEYWNGWACFIVSILMIGLLTAFIGDLASHFGCTIGLKDSVTAVVFVALGTSVPDTFASKVAATQDQYADASIGNVTGSNAVNVFLGIGVAWSIAAIYHAANGEQFKVSPGTLAFSVTLFTIFAFINVGVLLYRRRPEIGGELGGPRTAKLLTSCLFVLLWLLYIFFSSLEAYCHIKGFAAAGGSWSHPQFEKGGGSGGGSGGSAWSHPQFEK",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "QAVVTQESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRVPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVLGQPKSSPSVTLFPPSSEELETNKATLVCTITDFYPGVVTVDWKVDGTPVTQGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEG",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "2",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"B"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"L"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "QVQLQQSGAELARPGASVKLSCKATGYSFTSYWMQWVKQRPGQGMEWIGAIYPGDVTSRYTQKFKGKATLTADKSSSTAFMQLRSLASEDSAVYYCARWSGYYGSSSFDYWGQGTTLTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTINPCPPCKECHKCPAPNLEGGPS",
|
| 33 |
+
"count": 1,
|
| 34 |
+
"label_entity_id": "3",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"C"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"H"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
+
{
|
| 46 |
+
"entity1": 1,
|
| 47 |
+
"position1": 55,
|
| 48 |
+
"atom1": "SG",
|
| 49 |
+
"entity2": 1,
|
| 50 |
+
"position2": 802,
|
| 51 |
+
"atom2": "SG"
|
| 52 |
+
},
|
| 53 |
+
{
|
| 54 |
+
"entity1": 2,
|
| 55 |
+
"position1": 22,
|
| 56 |
+
"atom1": "SG",
|
| 57 |
+
"entity2": 2,
|
| 58 |
+
"position2": 90,
|
| 59 |
+
"atom2": "SG"
|
| 60 |
+
},
|
| 61 |
+
{
|
| 62 |
+
"entity1": 3,
|
| 63 |
+
"position1": 22,
|
| 64 |
+
"atom1": "SG",
|
| 65 |
+
"entity2": 3,
|
| 66 |
+
"position2": 96,
|
| 67 |
+
"atom2": "SG"
|
| 68 |
+
}
|
| 69 |
+
],
|
| 70 |
+
"name": "8sgt_H_L_A"
|
| 71 |
+
}
|
| 72 |
+
]
|
protenix_json/8sit_H_L_A.json
ADDED
|
@@ -0,0 +1,112 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "TNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLYNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYLYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSGHHHHHH",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "EVQLVESGGGLVKPGGSLRLSCAASGFTFSPYSMNWVRQAPGKGLEWVSSIRSSGNYISYADSVKGRFTISRDNAKNSLYLQMNSLRAEDMAVYYCARAGRDYYDRSGYQRFPGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "2",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"E"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"H"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "QSALTQPPSVSVAPGQTARITCGGNNIGSKGVQWYQQKPGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSSSDHWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS",
|
| 33 |
+
"count": 1,
|
| 34 |
+
"label_entity_id": "3",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"F"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"L"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
+
{
|
| 46 |
+
"entity1": 1,
|
| 47 |
+
"position1": 4,
|
| 48 |
+
"atom1": "SG",
|
| 49 |
+
"entity2": 1,
|
| 50 |
+
"position2": 29,
|
| 51 |
+
"atom2": "SG"
|
| 52 |
+
},
|
| 53 |
+
{
|
| 54 |
+
"entity1": 1,
|
| 55 |
+
"position1": 47,
|
| 56 |
+
"atom1": "SG",
|
| 57 |
+
"entity2": 1,
|
| 58 |
+
"position2": 100,
|
| 59 |
+
"atom2": "SG"
|
| 60 |
+
},
|
| 61 |
+
{
|
| 62 |
+
"entity1": 1,
|
| 63 |
+
"position1": 59,
|
| 64 |
+
"atom1": "SG",
|
| 65 |
+
"entity2": 1,
|
| 66 |
+
"position2": 193,
|
| 67 |
+
"atom2": "SG"
|
| 68 |
+
},
|
| 69 |
+
{
|
| 70 |
+
"entity1": 1,
|
| 71 |
+
"position1": 148,
|
| 72 |
+
"atom1": "SG",
|
| 73 |
+
"entity2": 1,
|
| 74 |
+
"position2": 156,
|
| 75 |
+
"atom2": "SG"
|
| 76 |
+
},
|
| 77 |
+
{
|
| 78 |
+
"entity1": 2,
|
| 79 |
+
"position1": 22,
|
| 80 |
+
"atom1": "SG",
|
| 81 |
+
"entity2": 2,
|
| 82 |
+
"position2": 96,
|
| 83 |
+
"atom2": "SG"
|
| 84 |
+
},
|
| 85 |
+
{
|
| 86 |
+
"entity1": 2,
|
| 87 |
+
"position1": 155,
|
| 88 |
+
"atom1": "SG",
|
| 89 |
+
"entity2": 2,
|
| 90 |
+
"position2": 211,
|
| 91 |
+
"atom2": "SG"
|
| 92 |
+
},
|
| 93 |
+
{
|
| 94 |
+
"entity1": 3,
|
| 95 |
+
"position1": 22,
|
| 96 |
+
"atom1": "SG",
|
| 97 |
+
"entity2": 3,
|
| 98 |
+
"position2": 87,
|
| 99 |
+
"atom2": "SG"
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"entity1": 3,
|
| 103 |
+
"position1": 136,
|
| 104 |
+
"atom1": "SG",
|
| 105 |
+
"entity2": 3,
|
| 106 |
+
"position2": 195,
|
| 107 |
+
"atom2": "SG"
|
| 108 |
+
}
|
| 109 |
+
],
|
| 110 |
+
"name": "8sit_H_L_A"
|
| 111 |
+
}
|
| 112 |
+
]
|
protenix_json/8smm_H_L_A.json
ADDED
|
@@ -0,0 +1,64 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "MHHHHHHHHHHHHMKEKAAETMEIPEGIPKDLEPKHPTLWRIIYYSFGVVLLATITAAYVAEFQVLKHEAILFSLGLYGLAMLLHLMMQSLFAFLEIRRVNKSELPCSFKKTVALTIAGYQENPEYLIKCLESCKYVKYPKDKLKIILVIDGNTEDDAYMMEMFKDVFHGEDVGTYVWKGNYHTVKKPEETNKGSCPEVSKPLNEDEGINMVEELVRNKRCVCIMQQWGGKREVMYTAFQAIGTSVDYVQVCDSDTKLDELATVEMVKVLESNDMYGAVGGDVRILNPYDSFISFMSSLRYWMAFNVERACQSYFDCVSCISGPLGMYRNNILQVFLEAWYRQKFLGTYCTLGDDRHLTNRVLSMGYRTKYTHKSRAFSETPSLYLRWLNQQTRWTKSYFREWLYNAQWWHKHHIWMTYESVVSFIFPFFITATVIRLIYAGTIWNVVWLLLCIQIMSLFKSIYACWLRGNFIMLLMSLYSMLYMTGLLPSKYFALLTLNKTGWGTSGRKKIVGNYMPILPLSIWAAVLCGGVGYSIYMDCQNDWSTPEKQKEMYHLLYGCVGYVMYWVIMAVMYWVWVKRCCRKRSQTVTLVHDIPDMCV",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSSYYIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSGYYWGPYFGGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "2",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"B"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"H"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC",
|
| 33 |
+
"count": 1,
|
| 34 |
+
"label_entity_id": "3",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"C"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"L"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
+
{
|
| 46 |
+
"entity1": 2,
|
| 47 |
+
"position1": 25,
|
| 48 |
+
"atom1": "SG",
|
| 49 |
+
"entity2": 2,
|
| 50 |
+
"position2": 99,
|
| 51 |
+
"atom2": "SG"
|
| 52 |
+
},
|
| 53 |
+
{
|
| 54 |
+
"entity1": 3,
|
| 55 |
+
"position1": 24,
|
| 56 |
+
"atom1": "SG",
|
| 57 |
+
"entity2": 3,
|
| 58 |
+
"position2": 89,
|
| 59 |
+
"atom2": "SG"
|
| 60 |
+
}
|
| 61 |
+
],
|
| 62 |
+
"name": "8smm_H_L_A"
|
| 63 |
+
}
|
| 64 |
+
]
|
protenix_json/8smp_H_L_A.json
ADDED
|
@@ -0,0 +1,64 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "MHHHHHHHHHHHHMKEKAAETMEIPEGIPKDLEPKHPTLWRIIYYSFGVVLLATITAAYVAEFQVLKHEAILFSLGLYGLAMLLHLMMQSLFAFLEIRRVNKSELPCSFKKTVALTIAGYQENPEYLIKCLESCKYVKYPKDKLKIILVIDGNTEDDAYMMEMFKDVFHGEDVGTYVWKGNYHTVKKPEETNKGSCPEVSKPLNEDEGINMVEELVRNKRCVCIMQQWGGKREVMYTAFQAIGTSVDYVQVCDSDTKLDELATVEMVKVLESNDMYGAVGGDVRILNPYDSFISFMSSLRYWMAFNVERACQSYFDCVSCISGPLGMYRNNILQVFLEAWYRQKFLGTYCTLGDDRHLTNRVLSMGYRTKYTHKSRAFSETPSLYLRWLNQQTRWTKSYFREWLYNAQWWHKHHIWMTYESVVSFIFPFFITATVIRLIYAGTIWNVVWLLLCIQIMSLFKSIYACWLRGNFIMLLMSLYSMLYMTGLLPSKYFALLTLNKTGWGTSGRKKIVGNYMPILPLSIWAAVLCGGVGYSIYMDCQNDWSTPEKQKEMYHLLYGCVGYVMYWVIMAVMYWVWVKRCCRKRSQTVTLVHDIPDMCV",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "EISEVQLVESGGGLVQPGGSLRLSCAASGFNVSSYYIHWVRQAPGKGLEWVASISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSGYYWGPYFGGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "2",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"B"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"H"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC",
|
| 33 |
+
"count": 1,
|
| 34 |
+
"label_entity_id": "3",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"C"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"L"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
+
{
|
| 46 |
+
"entity1": 2,
|
| 47 |
+
"position1": 25,
|
| 48 |
+
"atom1": "SG",
|
| 49 |
+
"entity2": 2,
|
| 50 |
+
"position2": 99,
|
| 51 |
+
"atom2": "SG"
|
| 52 |
+
},
|
| 53 |
+
{
|
| 54 |
+
"entity1": 3,
|
| 55 |
+
"position1": 24,
|
| 56 |
+
"atom1": "SG",
|
| 57 |
+
"entity2": 3,
|
| 58 |
+
"position2": 89,
|
| 59 |
+
"atom2": "SG"
|
| 60 |
+
}
|
| 61 |
+
],
|
| 62 |
+
"name": "8smp_H_L_A"
|
| 63 |
+
}
|
| 64 |
+
]
|
protenix_json/8t03_C_D_A.json
ADDED
|
@@ -0,0 +1,64 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "MGTVVAKLLLPTLSSLAFLPTVSIATKRRFYMEAMVYLFTMFFVAFSHACDGPGLSVLCFMRRDILEYFSIYGTALSMWVSLMALADFDEPQRSTFTMLGVLTIAVRTFHDRWGYGVYSGPIGTATLIIAVKWLKKMKEKKGLYPDKSIYTQQIGPGLCFGALALMLRFFFEEWDYTYVHSFYHCALAMSFVLLLPKVNKKAGNAGAPAKLTFSTLCCTCV",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "QVTLKESGPGILQPSQTLSLTCSFSGFSLSTSGMGVSWIRKPSGKGLEWLAHIFWDDDKRYNPSLKSRLTISKDTSSNQVFLMITSIDTADTATYYCARRTWLLHAMDYWGQGTSVTVSS",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "2",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"C"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"C"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "DIQMTQSPSSLSASLGGKVTITCKASQDINEYIAWYQHKPGKGPRLLIHYTSTLQPGIPSRFSGSGSGRDYSFSISNLEPEDIATYYCLQYDNLLWTFGGGTKLEIK",
|
| 33 |
+
"count": 1,
|
| 34 |
+
"label_entity_id": "3",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"D"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"D"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
+
{
|
| 46 |
+
"entity1": 1,
|
| 47 |
+
"position1": 50,
|
| 48 |
+
"atom1": "SG",
|
| 49 |
+
"entity2": 1,
|
| 50 |
+
"position2": 59,
|
| 51 |
+
"atom2": "SG"
|
| 52 |
+
},
|
| 53 |
+
{
|
| 54 |
+
"entity1": 2,
|
| 55 |
+
"position1": 22,
|
| 56 |
+
"atom1": "SG",
|
| 57 |
+
"entity2": 2,
|
| 58 |
+
"position2": 97,
|
| 59 |
+
"atom2": "SG"
|
| 60 |
+
}
|
| 61 |
+
],
|
| 62 |
+
"name": "8t03_C_D_A"
|
| 63 |
+
}
|
| 64 |
+
]
|
protenix_json/8tga_E_F_B.json
ADDED
|
@@ -0,0 +1,104 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "GNLTVAVVLPLANTSYPWSWARVGPAVELALAQVKARPDLLPGWTVRTVLGSSENALGVCSDTAAPLAAVDLKWEHNPAVFLGPGCVYAAAPVGRFTAHWRVPLLTAGAPALGFGVKDEYALTTRAGPSYAKLGDFVAALHRRLGWERQALMLYAYRPGDEEHCFFLVEGLFMRVRDRLNITVDHLEFAEDDLSHYTRLLRTMPRKGRVIYICSSPDAFRTLMLLALEAGLCGEDYVFFHLDIFGQSLQGGQGPAPRRPWERGDGQDVSARQAFQAAKIITYKDPDNPEYLEFLKQLKHLAYEQFNFTMEDGLVNTIPASFHDGLLLYIQAVTETLAHGGTVTDGENITQRMWNRSFQGVTGYLKIDSSGDRETDFSLWDMDPENGAFRVVLNYNGTSQELVAVSGRKLNWPLGYPPPDIPKCGFDNEDPACNQDHLSTLEEQKLISEEDLGGEQKLISEEDLHHHHHH",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"B"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "NIQMTQSPSSLSASVGDRVTITCRASQSIDSYLNWYQQKPGKAPKLLIYVASSLQSGVPSRFSGSGSGKDFTLTISSLQPEDFATYYCQQSYSIPTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "2",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"B"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"F"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "QVQLVQSGAEVKKPGASVTVSCKASGYTFTDYYMHWVRQAPGQGLEWMGWIKPNSGGTNSAQRFQGRITMTWDTSISTAYMELSRLRSDDTAVYYCSRGGPVMNYYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPP",
|
| 33 |
+
"count": 1,
|
| 34 |
+
"label_entity_id": "3",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"C"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"E"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
+
{
|
| 46 |
+
"entity1": 1,
|
| 47 |
+
"position1": 60,
|
| 48 |
+
"atom1": "SG",
|
| 49 |
+
"entity2": 1,
|
| 50 |
+
"position2": 86,
|
| 51 |
+
"atom2": "SG"
|
| 52 |
+
},
|
| 53 |
+
{
|
| 54 |
+
"entity1": 1,
|
| 55 |
+
"position1": 164,
|
| 56 |
+
"atom1": "SG",
|
| 57 |
+
"entity2": 1,
|
| 58 |
+
"position2": 213,
|
| 59 |
+
"atom2": "SG"
|
| 60 |
+
},
|
| 61 |
+
{
|
| 62 |
+
"entity1": 2,
|
| 63 |
+
"position1": 23,
|
| 64 |
+
"atom1": "SG",
|
| 65 |
+
"entity2": 2,
|
| 66 |
+
"position2": 88,
|
| 67 |
+
"atom2": "SG"
|
| 68 |
+
},
|
| 69 |
+
{
|
| 70 |
+
"entity1": 2,
|
| 71 |
+
"position1": 133,
|
| 72 |
+
"atom1": "SG",
|
| 73 |
+
"entity2": 2,
|
| 74 |
+
"position2": 193,
|
| 75 |
+
"atom2": "SG"
|
| 76 |
+
},
|
| 77 |
+
{
|
| 78 |
+
"entity1": 2,
|
| 79 |
+
"position1": 213,
|
| 80 |
+
"atom1": "SG",
|
| 81 |
+
"entity2": 3,
|
| 82 |
+
"position2": 138,
|
| 83 |
+
"atom2": "SG"
|
| 84 |
+
},
|
| 85 |
+
{
|
| 86 |
+
"entity1": 3,
|
| 87 |
+
"position1": 22,
|
| 88 |
+
"atom1": "SG",
|
| 89 |
+
"entity2": 3,
|
| 90 |
+
"position2": 96,
|
| 91 |
+
"atom2": "SG"
|
| 92 |
+
},
|
| 93 |
+
{
|
| 94 |
+
"entity1": 3,
|
| 95 |
+
"position1": 151,
|
| 96 |
+
"atom1": "SG",
|
| 97 |
+
"entity2": 3,
|
| 98 |
+
"position2": 207,
|
| 99 |
+
"atom2": "SG"
|
| 100 |
+
}
|
| 101 |
+
],
|
| 102 |
+
"name": "8tga_E_F_B"
|
| 103 |
+
}
|
| 104 |
+
]
|
protenix_json/8tkc_G_H_AB.json
ADDED
|
@@ -0,0 +1,173 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "AENLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLQCTNVTNNITDDMRGELKNCSFNMTTELRDKKQKVYSLFYRLDVVQINENQGNRSNNSNKEYRLINCNTSACTQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGPCPSVSTVQCTHGIKPVVSTQLLLNGSLAEEEVMIRSENITNNAKNILVQFNTPVQINCTRPNNNTRKSIRIGPGQAFYATGDIIGDIRQAHCNVSKATWNETLGKVVKQLRKHFGNNTIIRFANSSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWISNTSVQGSNSTGSNDSITLPCRIKQIINMWQRIGQCMYAPPIQGVIRCVSNITGLILTRDGGSTNSTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRCKRRVVGRRRRRR",
|
| 7 |
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"count": 1,
|
| 8 |
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"label_entity_id": "1",
|
| 9 |
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"label_asym_id": [
|
| 10 |
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"A"
|
| 11 |
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],
|
| 12 |
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"auth_asym_id": [
|
| 13 |
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"A"
|
| 14 |
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]
|
| 15 |
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}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "AVGIGAVFLGFLGAAGSTMGAASMTLTVQARNLLSGIVQQQSNLLRAPEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICCTNVPWNSSWSNRNLSEIWDNMTWLQWDKEISNYTQIIYGLLEESQNQQEKNEQDLLALD",
|
| 20 |
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"count": 1,
|
| 21 |
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"label_entity_id": "2",
|
| 22 |
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"label_asym_id": [
|
| 23 |
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"B"
|
| 24 |
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],
|
| 25 |
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"auth_asym_id": [
|
| 26 |
+
"B"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "QVQLQESGPGLVKASETLSLTCAVSGASVSGNYYWNWIRQSPGKELEWIGNIHGNSGTTTYNPSLESRVTISTDTSKNQFSLKLTSVTGADTATYFCATQFKKYWGLSVSSPFSFSDSWGQGVLVSVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ",
|
| 33 |
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"count": 1,
|
| 34 |
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"label_entity_id": "3",
|
| 35 |
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"label_asym_id": [
|
| 36 |
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"G"
|
| 37 |
+
],
|
| 38 |
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"auth_asym_id": [
|
| 39 |
+
"G"
|
| 40 |
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]
|
| 41 |
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}
|
| 42 |
+
},
|
| 43 |
+
{
|
| 44 |
+
"proteinChain": {
|
| 45 |
+
"sequence": "DIQMTQSPRSLSASVGDRVTITCRASQDISPDLNWYQQKPGGPLKLLIYDASNLQGGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCLQYNGYPWTFGQGTKVDHKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC",
|
| 46 |
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"count": 1,
|
| 47 |
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"label_entity_id": "4",
|
| 48 |
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"label_asym_id": [
|
| 49 |
+
"H"
|
| 50 |
+
],
|
| 51 |
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"auth_asym_id": [
|
| 52 |
+
"H"
|
| 53 |
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]
|
| 54 |
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}
|
| 55 |
+
}
|
| 56 |
+
],
|
| 57 |
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"covalent_bonds": [
|
| 58 |
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{
|
| 59 |
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"entity1": 1,
|
| 60 |
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|
| 61 |
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"atom1": "SG",
|
| 62 |
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|
| 63 |
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|
| 64 |
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|
| 65 |
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|
| 66 |
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{
|
| 67 |
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"entity1": 1,
|
| 68 |
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|
| 69 |
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|
| 70 |
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"entity2": 1,
|
| 71 |
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"position2": 175,
|
| 72 |
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"atom2": "SG"
|
| 73 |
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},
|
| 74 |
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{
|
| 75 |
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"entity1": 1,
|
| 76 |
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|
| 77 |
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|
| 78 |
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|
| 79 |
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"position2": 166,
|
| 80 |
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"atom2": "SG"
|
| 81 |
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},
|
| 82 |
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{
|
| 83 |
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"entity1": 1,
|
| 84 |
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"position1": 101,
|
| 85 |
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|
| 86 |
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"entity2": 1,
|
| 87 |
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"position2": 119,
|
| 88 |
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"atom2": "SG"
|
| 89 |
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},
|
| 90 |
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{
|
| 91 |
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"entity1": 1,
|
| 92 |
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"position1": 171,
|
| 93 |
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"atom1": "SG",
|
| 94 |
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"entity2": 1,
|
| 95 |
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"position2": 401,
|
| 96 |
+
"atom2": "SG"
|
| 97 |
+
},
|
| 98 |
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{
|
| 99 |
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"entity1": 1,
|
| 100 |
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"position1": 188,
|
| 101 |
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"atom1": "SG",
|
| 102 |
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"entity2": 1,
|
| 103 |
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"position2": 217,
|
| 104 |
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"atom2": "SG"
|
| 105 |
+
},
|
| 106 |
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{
|
| 107 |
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"entity1": 1,
|
| 108 |
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|
| 109 |
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"atom1": "SG",
|
| 110 |
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"entity2": 1,
|
| 111 |
+
"position2": 209,
|
| 112 |
+
"atom2": "SG"
|
| 113 |
+
},
|
| 114 |
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{
|
| 115 |
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"entity1": 1,
|
| 116 |
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"position1": 266,
|
| 117 |
+
"atom1": "SG",
|
| 118 |
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|
| 119 |
+
"position2": 300,
|
| 120 |
+
"atom2": "SG"
|
| 121 |
+
},
|
| 122 |
+
{
|
| 123 |
+
"entity1": 1,
|
| 124 |
+
"position1": 347,
|
| 125 |
+
"atom1": "SG",
|
| 126 |
+
"entity2": 1,
|
| 127 |
+
"position2": 413,
|
| 128 |
+
"atom2": "SG"
|
| 129 |
+
},
|
| 130 |
+
{
|
| 131 |
+
"entity1": 1,
|
| 132 |
+
"position1": 354,
|
| 133 |
+
"atom1": "SG",
|
| 134 |
+
"entity2": 1,
|
| 135 |
+
"position2": 386,
|
| 136 |
+
"atom2": "SG"
|
| 137 |
+
},
|
| 138 |
+
{
|
| 139 |
+
"entity1": 1,
|
| 140 |
+
"position1": 469,
|
| 141 |
+
"atom1": "SG",
|
| 142 |
+
"entity2": 2,
|
| 143 |
+
"position2": 94,
|
| 144 |
+
"atom2": "SG"
|
| 145 |
+
},
|
| 146 |
+
{
|
| 147 |
+
"entity1": 2,
|
| 148 |
+
"position1": 87,
|
| 149 |
+
"atom1": "SG",
|
| 150 |
+
"entity2": 2,
|
| 151 |
+
"position2": 93,
|
| 152 |
+
"atom2": "SG"
|
| 153 |
+
},
|
| 154 |
+
{
|
| 155 |
+
"entity1": 3,
|
| 156 |
+
"position1": 22,
|
| 157 |
+
"atom1": "SG",
|
| 158 |
+
"entity2": 3,
|
| 159 |
+
"position2": 97,
|
| 160 |
+
"atom2": "SG"
|
| 161 |
+
},
|
| 162 |
+
{
|
| 163 |
+
"entity1": 4,
|
| 164 |
+
"position1": 23,
|
| 165 |
+
"atom1": "SG",
|
| 166 |
+
"entity2": 4,
|
| 167 |
+
"position2": 88,
|
| 168 |
+
"atom2": "SG"
|
| 169 |
+
}
|
| 170 |
+
],
|
| 171 |
+
"name": "8tkc_G_H_AB"
|
| 172 |
+
}
|
| 173 |
+
]
|
protenix_json/8tl5_G_H_AB.json
ADDED
|
@@ -0,0 +1,173 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
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|
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|
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|
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|
|
|
|
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|
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|
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|
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|
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|
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|
|
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
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[
|
| 2 |
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{
|
| 3 |
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|
| 4 |
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|
| 5 |
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|
| 6 |
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| 10 |
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| 13 |
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| 14 |
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| 15 |
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|
| 16 |
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| 17 |
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| 18 |
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|
| 19 |
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| 23 |
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| 24 |
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| 26 |
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|
| 27 |
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| 28 |
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|
| 29 |
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| 30 |
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|
| 31 |
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|
| 32 |
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| 33 |
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| 35 |
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| 36 |
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| 37 |
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| 38 |
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| 39 |
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| 40 |
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| 41 |
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| 42 |
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| 43 |
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| 44 |
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| 45 |
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| 53 |
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| 55 |
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| 56 |
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| 57 |
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| 58 |
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| 59 |
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| 61 |
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| 62 |
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| 63 |
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| 64 |
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| 65 |
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| 66 |
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| 68 |
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| 70 |
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| 81 |
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| 82 |
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| 83 |
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| 84 |
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| 85 |
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| 89 |
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| 90 |
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| 91 |
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| 93 |
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| 94 |
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| 97 |
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| 98 |
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| 99 |
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| 102 |
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| 105 |
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| 111 |
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| 114 |
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| 115 |
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| 116 |
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| 118 |
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| 121 |
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| 122 |
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| 123 |
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|
| 124 |
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|
| 125 |
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| 126 |
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| 127 |
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| 128 |
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| 129 |
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| 130 |
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| 131 |
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| 132 |
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| 137 |
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| 138 |
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| 139 |
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| 141 |
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| 143 |
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| 144 |
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| 145 |
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| 146 |
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| 147 |
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|
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| 150 |
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| 151 |
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|
| 152 |
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| 153 |
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| 154 |
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|
| 155 |
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|
| 156 |
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|
| 157 |
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| 158 |
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|
| 159 |
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|
| 160 |
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| 161 |
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| 163 |
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|
| 164 |
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| 166 |
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|
| 167 |
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|
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|
| 170 |
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| 171 |
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|
| 172 |
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}
|
| 173 |
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]
|
protenix_json/8tnj_D_C_A.json
ADDED
|
@@ -0,0 +1,104 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "NRFLGDYVVGGGGSGGGGSGGGGSIQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYACRVNHVTLSQPKIVKWDRDMGGGGSGGGGSGGGGSGGGGSGSHSMRYFHTSVSRPGRGEPRFITVGYVDDTQFVRFDSDAASPREEPRAPWIEQEGPEYWDRNTQICKAKAQTDRVGLRNLRGYYNQSEDGSHTWQTMYGCDMGPDGRLLRGYNQFAYDGKDYIALNEDLRSWTAADTAAQITQRKWEAARVAEQLRAYLEGECVEWLRRHLENGKETLQRADPPKTHVTHHPISDHEATLRCWALGFYPAEITLTWQRDGEDQTQDTELVETRPAGDGTFQKWAAVVVPSGQEQRYTCHVQHEGLQEPLTLRWKPGGSGLEVLFQGPHHHHHHHH",
|
| 7 |
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|
| 8 |
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|
| 9 |
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|
| 10 |
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|
| 11 |
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|
| 12 |
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| 13 |
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|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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{
|
| 18 |
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"proteinChain": {
|
| 19 |
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"sequence": "SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSWSAYPFTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC",
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| 20 |
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| 21 |
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|
| 22 |
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| 23 |
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|
| 24 |
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| 25 |
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| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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{
|
| 31 |
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|
| 32 |
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|
| 33 |
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| 34 |
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|
| 35 |
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| 36 |
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|
| 37 |
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| 38 |
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| 39 |
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|
| 40 |
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| 41 |
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| 42 |
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| 43 |
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| 44 |
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| 45 |
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| 51 |
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|
| 52 |
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| 53 |
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| 54 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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|
| 61 |
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{
|
| 62 |
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|
| 63 |
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|
| 64 |
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|
| 65 |
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|
| 66 |
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|
| 67 |
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|
| 68 |
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|
| 69 |
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|
| 70 |
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|
| 71 |
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|
| 72 |
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|
| 73 |
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|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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{
|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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|
| 82 |
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|
| 83 |
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|
| 84 |
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|
| 85 |
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{
|
| 86 |
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|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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{
|
| 94 |
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|
| 95 |
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|
| 96 |
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|
| 97 |
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|
| 98 |
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|
| 99 |
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|
| 100 |
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}
|
| 101 |
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],
|
| 102 |
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"name": "8tnj_D_C_A"
|
| 103 |
+
}
|
| 104 |
+
]
|
protenix_json/8tp4_H_L_C.json
ADDED
|
@@ -0,0 +1,112 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
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"sequences": [
|
| 4 |
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{
|
| 5 |
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|
| 6 |
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"sequence": "MAIIYLILLFTAVRGDQICIGYHANNSTEKVDTILERNVTVTHAKDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLSVPEWSYIMEKENPRDGLCYPGSFNDYEELKHLLSSVKHFEKVKILPKDRWTQHTTTGGSRACAVSGNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGTYVSVGTSTLNKRSTPDIATRPKVNGQGGRMEFSWTLLDMWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNVHPLTIGECPKYVKSEKLVLATGLRNVPQIESRGLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAFDGITNKVNSVIEKMNTQFEAVGKEFSNLERRLENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRMQLRDNVKELGNGCFEFYHKCDDECMNSVKNGTYDYPKYEEES",
|
| 7 |
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| 8 |
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|
| 9 |
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|
| 10 |
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|
| 11 |
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|
| 12 |
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|
| 13 |
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"C"
|
| 14 |
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|
| 15 |
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|
| 16 |
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|
| 17 |
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{
|
| 18 |
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"proteinChain": {
|
| 19 |
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| 20 |
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| 21 |
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| 22 |
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| 23 |
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|
| 24 |
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| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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{
|
| 31 |
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"proteinChain": {
|
| 32 |
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"sequence": "QSVLTQPPSVSGAPGQRVTVSCTGSSSNLGATYEVHWYQQFPGTAPKLLIYGSTNRPSGVPERFSGSKSGTSASLTITGLQAEDEADYYCQSYDTSLRGFYVFGTGTKVTVLGQPKANPTVTLFP",
|
| 33 |
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| 34 |
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|
| 35 |
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|
| 36 |
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|
| 37 |
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| 38 |
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|
| 39 |
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|
| 40 |
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|
| 41 |
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|
| 42 |
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|
| 43 |
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|
| 44 |
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|
| 45 |
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| 46 |
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|
| 47 |
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| 48 |
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|
| 49 |
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|
| 50 |
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|
| 51 |
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|
| 52 |
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| 53 |
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| 54 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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|
| 61 |
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{
|
| 62 |
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|
| 63 |
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|
| 64 |
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|
| 65 |
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|
| 66 |
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|
| 67 |
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|
| 68 |
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|
| 69 |
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{
|
| 70 |
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|
| 71 |
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|
| 72 |
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|
| 73 |
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|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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|
| 82 |
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|
| 83 |
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|
| 84 |
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| 85 |
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{
|
| 86 |
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|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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{
|
| 94 |
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|
| 95 |
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|
| 96 |
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|
| 97 |
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|
| 98 |
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|
| 99 |
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"atom2": "SG"
|
| 100 |
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|
| 101 |
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{
|
| 102 |
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"entity1": 3,
|
| 103 |
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"position1": 22,
|
| 104 |
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"atom1": "SG",
|
| 105 |
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|
| 106 |
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|
| 107 |
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"atom2": "SG"
|
| 108 |
+
}
|
| 109 |
+
],
|
| 110 |
+
"name": "8tp4_H_L_C"
|
| 111 |
+
}
|
| 112 |
+
]
|
protenix_json/8tp7_D_F_A.json
ADDED
|
@@ -0,0 +1,112 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "MAIIYLILLFTAVRGDQICIGYHANNSTEKVDTILERNVTVTHAKDILEKTHNGKLCKLNGIPPLELGDCSIAGWLLGNPECDRLLSVPEWSYIMEKENPRDGLCYPGSFNDYEELKHLLSSVKHFEKVKILPKDRWTQHTTTGGSRACAVSGNPSFFRNMVWLTKKGSNYPVAKGSYNNTSGEQMLIIWGVHHPNDETEQRTLYQNVGTYVSVGTSTLNKRSTPDIATRPKVNGQGGRMEFSWTLLDMWDTINFESTGNLIAPEYGFKISKRGSSGIMKTEGTLENCETKCQTPLGAINTTLPFHNVHPLTIGECPKYVKSEKLVLATGLRNVPQIESRGLFGAIAGFIEGGWQGMVDGWYGYHHSNDQGSGYAADKESTQKAFDGITNKVNSVIEKMNTQFEAVGKEFSNLERRLENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHDSNVKNLYDKVRMQLRDNVKELGNGCFEFYHKCDDECMNSVKNGTYDYPKYEEESKLNRNEIKGVKLSSMGVYQILAIYATVAGSLSLAIMMAGISFWMCSNGSLQCRICI",
|
| 7 |
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|
| 8 |
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|
| 9 |
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|
| 10 |
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|
| 11 |
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|
| 12 |
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| 13 |
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|
| 14 |
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]
|
| 15 |
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|
| 16 |
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},
|
| 17 |
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{
|
| 18 |
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"proteinChain": {
|
| 19 |
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"sequence": "QVQLQESGPGLVKTSETLSLTCAVSGGSISGSRYYWAWIRQPPGKGLEWIGNLYYSGTNFYNPSLEGRVTISVDTSKNQVSLKLSSVTAADTAVYFCARHVYYSDTNSYTYFFDYWGQGTLVTVSS",
|
| 20 |
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| 21 |
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|
| 22 |
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| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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{
|
| 31 |
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"proteinChain": {
|
| 32 |
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"sequence": "ALTQPASVSGSPGQSITISCTGTSSDIGGYNYVSWYQNHPGKAPKLIIYDVSHRPSGVSNRFSGSKSGNTASLSISGLQAEDEADYYCCSFTDNNIPAFGGGTKLTVL",
|
| 33 |
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| 34 |
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|
| 35 |
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| 36 |
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| 37 |
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|
| 38 |
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| 39 |
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|
| 40 |
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|
| 41 |
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| 42 |
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|
| 43 |
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| 44 |
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|
| 45 |
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| 46 |
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| 48 |
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| 49 |
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| 50 |
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|
| 51 |
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| 52 |
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| 53 |
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| 54 |
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| 55 |
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|
| 56 |
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| 57 |
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| 58 |
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|
| 59 |
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|
| 60 |
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|
| 61 |
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{
|
| 62 |
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|
| 63 |
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|
| 64 |
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|
| 65 |
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|
| 66 |
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|
| 67 |
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|
| 68 |
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|
| 69 |
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{
|
| 70 |
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|
| 71 |
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|
| 72 |
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|
| 73 |
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|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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{
|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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|
| 82 |
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|
| 83 |
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|
| 84 |
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|
| 85 |
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{
|
| 86 |
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|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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{
|
| 94 |
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|
| 95 |
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|
| 96 |
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|
| 97 |
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|
| 98 |
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|
| 99 |
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"atom2": "SG"
|
| 100 |
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|
| 101 |
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{
|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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|
| 107 |
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"atom2": "SG"
|
| 108 |
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}
|
| 109 |
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],
|
| 110 |
+
"name": "8tp7_D_F_A"
|
| 111 |
+
}
|
| 112 |
+
]
|
protenix_json/8tq9_H_L_AB.json
ADDED
|
@@ -0,0 +1,117 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "SHSLRYFVTAVSRPGFGEPRYMEVGYVDNTEFVRFDSDAENPRYEPRARWIEQEGPEYWERETRRAKGNEQSFRVDLRTALRYYNQSAGGSHTLQWMAGCDVESDGRLLRGYWQFAYDGCDYIALNEDLKTWTAADMAAQITRRKWEQAGAAERDRAYLEGECVEWLRRYLKNGNATLLRTDPPKAHVTHHRRPEGDVTLRCWALGFYPADITLTWQLNGEELTQEMELVETRPAGDGTFQKWASVVVPLGKEQKYTCHVEHEGLPEPLTLRW",
|
| 7 |
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"count": 1,
|
| 8 |
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|
| 9 |
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|
| 10 |
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|
| 11 |
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|
| 12 |
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|
| 13 |
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|
| 14 |
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|
| 15 |
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}
|
| 16 |
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},
|
| 17 |
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{
|
| 18 |
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"proteinChain": {
|
| 19 |
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|
| 20 |
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|
| 21 |
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|
| 22 |
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| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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}
|
| 29 |
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},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "VQLQQSGPVLVKPGASVKMSCKASGYTFTDHYMNWVKQSPGKSLEWIGGINPYNGGISYNQKFKGMATLTADKSSSTAYMELNSLTSEDSAVYYCVRRIGYYPSYFFDYWGQGTTLTVSSAKTTPPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIE",
|
| 33 |
+
"count": 1,
|
| 34 |
+
"label_entity_id": "3",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"C"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"H"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
},
|
| 43 |
+
{
|
| 44 |
+
"proteinChain": {
|
| 45 |
+
"sequence": "STTVTQSPASLSVATGEKVTIRCITSTDIDDNMNWYQQKPGEPPKLLISEGNTLRPGVPSRFSSSGFGTDFVFTIENTLSEDFADYYCLQSDDMPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC",
|
| 46 |
+
"count": 1,
|
| 47 |
+
"label_entity_id": "4",
|
| 48 |
+
"label_asym_id": [
|
| 49 |
+
"D"
|
| 50 |
+
],
|
| 51 |
+
"auth_asym_id": [
|
| 52 |
+
"L"
|
| 53 |
+
]
|
| 54 |
+
}
|
| 55 |
+
}
|
| 56 |
+
],
|
| 57 |
+
"covalent_bonds": [
|
| 58 |
+
{
|
| 59 |
+
"entity1": 1,
|
| 60 |
+
"position1": 100,
|
| 61 |
+
"atom1": "SG",
|
| 62 |
+
"entity2": 1,
|
| 63 |
+
"position2": 163,
|
| 64 |
+
"atom2": "SG"
|
| 65 |
+
},
|
| 66 |
+
{
|
| 67 |
+
"entity1": 1,
|
| 68 |
+
"position1": 202,
|
| 69 |
+
"atom1": "SG",
|
| 70 |
+
"entity2": 1,
|
| 71 |
+
"position2": 258,
|
| 72 |
+
"atom2": "SG"
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"entity1": 2,
|
| 76 |
+
"position1": 27,
|
| 77 |
+
"atom1": "SG",
|
| 78 |
+
"entity2": 2,
|
| 79 |
+
"position2": 82,
|
| 80 |
+
"atom2": "SG"
|
| 81 |
+
},
|
| 82 |
+
{
|
| 83 |
+
"entity1": 3,
|
| 84 |
+
"position1": 21,
|
| 85 |
+
"atom1": "SG",
|
| 86 |
+
"entity2": 3,
|
| 87 |
+
"position2": 95,
|
| 88 |
+
"atom2": "SG"
|
| 89 |
+
},
|
| 90 |
+
{
|
| 91 |
+
"entity1": 3,
|
| 92 |
+
"position1": 147,
|
| 93 |
+
"atom1": "SG",
|
| 94 |
+
"entity2": 3,
|
| 95 |
+
"position2": 202,
|
| 96 |
+
"atom2": "SG"
|
| 97 |
+
},
|
| 98 |
+
{
|
| 99 |
+
"entity1": 4,
|
| 100 |
+
"position1": 23,
|
| 101 |
+
"atom1": "SG",
|
| 102 |
+
"entity2": 4,
|
| 103 |
+
"position2": 88,
|
| 104 |
+
"atom2": "SG"
|
| 105 |
+
},
|
| 106 |
+
{
|
| 107 |
+
"entity1": 4,
|
| 108 |
+
"position1": 134,
|
| 109 |
+
"atom1": "SG",
|
| 110 |
+
"entity2": 4,
|
| 111 |
+
"position2": 194,
|
| 112 |
+
"atom2": "SG"
|
| 113 |
+
}
|
| 114 |
+
],
|
| 115 |
+
"name": "8tq9_H_L_AB"
|
| 116 |
+
}
|
| 117 |
+
]
|
protenix_json/8tqi_H_L_B.json
ADDED
|
@@ -0,0 +1,120 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "EVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTPSLVINDLIYAYTSNLITRGCQDIGKSYQVLQIGIITVNSDLVPDLNPRISHTFNINDNRKSCSLALLNTDVYQLCSTPKVDERSDYASSGIEDIVLDIVNHDGSISTTRFKNNNISFDQPYAALYPSVGPGIYYKGKIIFLGYGGLEHPINENAICNTTGCPGKTQRDCNQASHSPWFSDRRMVNSIIVVDKGLNSIPKLKVWTISMRQNYWGSEGRLLLLGNKIYIYTRSTSWHSKLQLGIIDITDYSDIRIKWTWHNVLSRPGNNECPWGHSCPDGCITGVYTDAYPLNPTGSIVSSVILDSQKSRVNPVITYSTSTERVNELAIRNKTLSAGYTTTSCITHYNKGYCFHIVEINHKSLDTFQPMLFKTEIPKSCSGSENLYFQGGSHHHHHH",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"B"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"B"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "EVKLLESGGGLIQPGDSLRLSCAASGFTFSTFAMSWVRQAPGKGLEWVSVITSTGSSADYADSVKGRFTMSRDNSKNTVYLQMDSLRADDTAVYFCAKQGATILSSFESWGQGSLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "2",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"G"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"H"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "DIQMTQSPSSLSASIGDRVTITCQASQDIDKYLNWYQQKPGKAPKLLIYDASNFETGVPSRFSGSGSGTYFTFTISSLQAEDIATYYCQQYDDLPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC",
|
| 33 |
+
"count": 1,
|
| 34 |
+
"label_entity_id": "3",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"H"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"L"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
+
{
|
| 46 |
+
"entity1": 1,
|
| 47 |
+
"position1": 24,
|
| 48 |
+
"atom1": "SG",
|
| 49 |
+
"entity2": 1,
|
| 50 |
+
"position2": 436,
|
| 51 |
+
"atom2": "SG"
|
| 52 |
+
},
|
| 53 |
+
{
|
| 54 |
+
"entity1": 1,
|
| 55 |
+
"position1": 55,
|
| 56 |
+
"atom1": "SG",
|
| 57 |
+
"entity2": 1,
|
| 58 |
+
"position2": 79,
|
| 59 |
+
"atom2": "SG"
|
| 60 |
+
},
|
| 61 |
+
{
|
| 62 |
+
"entity1": 1,
|
| 63 |
+
"position1": 121,
|
| 64 |
+
"atom1": "SG",
|
| 65 |
+
"entity2": 1,
|
| 66 |
+
"position2": 134,
|
| 67 |
+
"atom2": "SG"
|
| 68 |
+
},
|
| 69 |
+
{
|
| 70 |
+
"entity1": 1,
|
| 71 |
+
"position1": 215,
|
| 72 |
+
"atom1": "SG",
|
| 73 |
+
"entity2": 1,
|
| 74 |
+
"position2": 228,
|
| 75 |
+
"atom2": "SG"
|
| 76 |
+
},
|
| 77 |
+
{
|
| 78 |
+
"entity1": 1,
|
| 79 |
+
"position1": 220,
|
| 80 |
+
"atom1": "SG",
|
| 81 |
+
"entity2": 1,
|
| 82 |
+
"position2": 334,
|
| 83 |
+
"atom2": "SG"
|
| 84 |
+
},
|
| 85 |
+
{
|
| 86 |
+
"entity1": 1,
|
| 87 |
+
"position1": 328,
|
| 88 |
+
"atom1": "SG",
|
| 89 |
+
"entity2": 1,
|
| 90 |
+
"position2": 338,
|
| 91 |
+
"atom2": "SG"
|
| 92 |
+
},
|
| 93 |
+
{
|
| 94 |
+
"entity1": 1,
|
| 95 |
+
"position1": 400,
|
| 96 |
+
"atom1": "SG",
|
| 97 |
+
"entity2": 1,
|
| 98 |
+
"position2": 409,
|
| 99 |
+
"atom2": "SG"
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"entity1": 2,
|
| 103 |
+
"position1": 22,
|
| 104 |
+
"atom1": "SG",
|
| 105 |
+
"entity2": 2,
|
| 106 |
+
"position2": 96,
|
| 107 |
+
"atom2": "SG"
|
| 108 |
+
},
|
| 109 |
+
{
|
| 110 |
+
"entity1": 3,
|
| 111 |
+
"position1": 23,
|
| 112 |
+
"atom1": "SG",
|
| 113 |
+
"entity2": 3,
|
| 114 |
+
"position2": 88,
|
| 115 |
+
"atom2": "SG"
|
| 116 |
+
}
|
| 117 |
+
],
|
| 118 |
+
"name": "8tqi_H_L_B"
|
| 119 |
+
}
|
| 120 |
+
]
|
protenix_json/8ty1_C_B_A.json
ADDED
|
@@ -0,0 +1,136 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "MQLELSTCVFLCLLPLGFSAIRRYYLGAVELSWDYRQSELLRELHVDTRFPATAPGALPLGPSVLYKKTVFVEFTDQLFSVARPRPPWMGLLGPTIQAEVYDTVVVTLKNMASHPVSLHAVGVSFWKSSEGAEYEDHTSQREKEDDKVLPGKSQTYVWQVLKENGPTASDPPCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLTRERTQNLHEFVLLFAVFDEGKSWHSARNDSWTRAMDPAPARAQPAMHTVNGYVNRSLPGLIGCHKKSVYWHVIGMGTSPEVHSIFLEGHTFLVRHHRQASLEISPLTFLTAQTFLMDLGQFLLFCHISSHHHGGMEAHVRVESCAEEPQLRRKADEEEDYDDNLYDSDMDVVRLDGDDVSPFIQIRSVAKKHPKTWVHYIAAEEEDWDYAPLVLAPDDRSYKSQYLNNGPQRIGRKYKKVRFMAYTDETFKTREAIQHESGILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDVRPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSDPRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQRFLPNPAGVQLEDPEFQASNIMHSINGYVFDSLQLSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHKMVYEDTLTLFPFSGETVFMSMENPGLWILGCHNSDFRNRGMTALLKVSSCDKNTGDYYEDSYEDISAYLLSKNNAIEPRSFAQNSRPPSASAPKPPVLRRHQRDISLPTFQPEEDKMDYDDIFSTETKGEDFDIYGEDENQDPRSFQKRTRHYFIAAVEQLWDYGMSESPRALRNRAQNGEVPRFKKVVFREFADGSFTQPSYRGELNKHLGLLGPYIRAEVEDNIMVTFKNQASRPYSFYSSLISYPDDQEQGAEPRHNFVQPNETRTYFWKVQHHMAPTEDEFDCKAWAYFSDVDLEKDVHSGLIGPLLICRANTLNAAHGRQVTVQEFALFFTIFDETKSWYFTENVERNCRAPCHLQMEDPTLKENYRFHAINGYVMDTLPGLVMAQNQRIRWYLLSMGSNENIHSIHFSGHVFSVRKKEEYKMAVYNLYPGVFETVEMLPSKVGIWRIECLIGEHLQAGMSTTFLVYSKKCQTPLGMASGHIRDFQITASGQYGQWAPKLARLHYSGSINAWSTKEPFSWIKVDLLAPMIIHGIKTQGARQKFSSLYISQFIIMYSLDGKKWQTYRGNSTGTLMVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSIRSTLRMELMGCDLNSCSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVDFQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPVVNSLDPPLLTRYLRIHPQSWVHQIALRMEVLGCEAQDLY",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "EIVLTQFPGTLSLSPGERATLSCRASQSVASAYLAWYQQKPGQAPRLLIYGASSRATDIPHRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGTSALLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "2",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"B"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"B"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "QVQLVQSGAEVKKPGASVKVSCKTSGYNFTGYSASGHIFTAYSVHWVRQAPGQGLEWMGRINPNSGATDYAHKFQGRVTMSRDTSISTAYMELSRLTSDDTAMYYCARADNYFDIVTGYTSHYFDYWGRGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV",
|
| 33 |
+
"count": 1,
|
| 34 |
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"label_entity_id": "3",
|
| 35 |
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"label_asym_id": [
|
| 36 |
+
"C"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"C"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
+
{
|
| 46 |
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|
| 47 |
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|
| 48 |
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|
| 49 |
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|
| 50 |
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|
| 51 |
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"atom2": "SG"
|
| 52 |
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},
|
| 53 |
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{
|
| 54 |
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"entity1": 1,
|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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},
|
| 61 |
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{
|
| 62 |
+
"entity1": 1,
|
| 63 |
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"position1": 547,
|
| 64 |
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"atom1": "SG",
|
| 65 |
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|
| 66 |
+
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|
| 67 |
+
"atom2": "SG"
|
| 68 |
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},
|
| 69 |
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{
|
| 70 |
+
"entity1": 1,
|
| 71 |
+
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|
| 72 |
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|
| 73 |
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|
| 74 |
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|
| 75 |
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|
| 76 |
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},
|
| 77 |
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{
|
| 78 |
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|
| 79 |
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"position1": 967,
|
| 80 |
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|
| 81 |
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|
| 82 |
+
"position2": 993,
|
| 83 |
+
"atom2": "SG"
|
| 84 |
+
},
|
| 85 |
+
{
|
| 86 |
+
"entity1": 1,
|
| 87 |
+
"position1": 1156,
|
| 88 |
+
"atom1": "SG",
|
| 89 |
+
"entity2": 1,
|
| 90 |
+
"position2": 1304,
|
| 91 |
+
"atom2": "SG"
|
| 92 |
+
},
|
| 93 |
+
{
|
| 94 |
+
"entity1": 1,
|
| 95 |
+
"position1": 1309,
|
| 96 |
+
"atom1": "SG",
|
| 97 |
+
"entity2": 1,
|
| 98 |
+
"position2": 1461,
|
| 99 |
+
"atom2": "SG"
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"entity1": 2,
|
| 103 |
+
"position1": 23,
|
| 104 |
+
"atom1": "SG",
|
| 105 |
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"entity2": 2,
|
| 106 |
+
"position2": 89,
|
| 107 |
+
"atom2": "SG"
|
| 108 |
+
},
|
| 109 |
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{
|
| 110 |
+
"entity1": 2,
|
| 111 |
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"position1": 136,
|
| 112 |
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"atom1": "SG",
|
| 113 |
+
"entity2": 2,
|
| 114 |
+
"position2": 196,
|
| 115 |
+
"atom2": "SG"
|
| 116 |
+
},
|
| 117 |
+
{
|
| 118 |
+
"entity1": 3,
|
| 119 |
+
"position1": 22,
|
| 120 |
+
"atom1": "SG",
|
| 121 |
+
"entity2": 3,
|
| 122 |
+
"position2": 106,
|
| 123 |
+
"atom2": "SG"
|
| 124 |
+
},
|
| 125 |
+
{
|
| 126 |
+
"entity1": 3,
|
| 127 |
+
"position1": 164,
|
| 128 |
+
"atom1": "SG",
|
| 129 |
+
"entity2": 3,
|
| 130 |
+
"position2": 220,
|
| 131 |
+
"atom2": "SG"
|
| 132 |
+
}
|
| 133 |
+
],
|
| 134 |
+
"name": "8ty1_C_B_A"
|
| 135 |
+
}
|
| 136 |
+
]
|
protenix_json/8tzu_C__B.json
ADDED
|
@@ -0,0 +1,125 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "LPNCNIEAWLNDKSVPSPLNWERKTFSNCNFNMSSLMSFIQADSFTCNNIDAAKIYGMCFSSITIDKFAIPNGRKVDLQLGNLGYLQSFNYRIDTTATSCQLYYNLPAANVSVSRFNPSTWNKRFGFIEDSVFKPRPAGVLTNHDVVYAQHCFKAPKNFCPCKLNGSCVGSGPGKNNGIGTCPAGTNYLTCDNLCTPDPITFTGTYKCPQTKSLVGIGEHCSGLAVKSDYCGGNSCTCRPQAFLGWSADSCLQGDKCNIFANFILHDVNSGLTCS",
|
| 7 |
+
"count": 1,
|
| 8 |
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"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"B"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"B"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "QVQLQESGGGLVQAGGSLRLSCAASVRTFSNYAMGWFRQAPGKEREFVAAISWSGDGPYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAASYLSLNFPDDLRGQGTQVTVSSH",
|
| 20 |
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"count": 1,
|
| 21 |
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"label_entity_id": "2",
|
| 22 |
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"label_asym_id": [
|
| 23 |
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"C"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"C"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
}
|
| 30 |
+
],
|
| 31 |
+
"covalent_bonds": [
|
| 32 |
+
{
|
| 33 |
+
"entity1": 1,
|
| 34 |
+
"position1": 4,
|
| 35 |
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"atom1": "SG",
|
| 36 |
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"entity2": 1,
|
| 37 |
+
"position2": 29,
|
| 38 |
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"atom2": "SG"
|
| 39 |
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},
|
| 40 |
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{
|
| 41 |
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"entity1": 1,
|
| 42 |
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"position1": 47,
|
| 43 |
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|
| 44 |
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"entity2": 1,
|
| 45 |
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"position2": 100,
|
| 46 |
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"atom2": "SG"
|
| 47 |
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},
|
| 48 |
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{
|
| 49 |
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"entity1": 1,
|
| 50 |
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|
| 51 |
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|
| 52 |
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|
| 53 |
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|
| 54 |
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"atom2": "SG"
|
| 55 |
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},
|
| 56 |
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{
|
| 57 |
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"entity1": 1,
|
| 58 |
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"position1": 160,
|
| 59 |
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"atom1": "SG",
|
| 60 |
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"entity2": 1,
|
| 61 |
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"position2": 182,
|
| 62 |
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"atom2": "SG"
|
| 63 |
+
},
|
| 64 |
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{
|
| 65 |
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"entity1": 1,
|
| 66 |
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"position1": 162,
|
| 67 |
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"atom1": "SG",
|
| 68 |
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"entity2": 1,
|
| 69 |
+
"position2": 236,
|
| 70 |
+
"atom2": "SG"
|
| 71 |
+
},
|
| 72 |
+
{
|
| 73 |
+
"entity1": 1,
|
| 74 |
+
"position1": 168,
|
| 75 |
+
"atom1": "SG",
|
| 76 |
+
"entity2": 1,
|
| 77 |
+
"position2": 191,
|
| 78 |
+
"atom2": "SG"
|
| 79 |
+
},
|
| 80 |
+
{
|
| 81 |
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"entity1": 1,
|
| 82 |
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"position1": 195,
|
| 83 |
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"atom1": "SG",
|
| 84 |
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"entity2": 1,
|
| 85 |
+
"position2": 208,
|
| 86 |
+
"atom2": "SG"
|
| 87 |
+
},
|
| 88 |
+
{
|
| 89 |
+
"entity1": 1,
|
| 90 |
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"position1": 231,
|
| 91 |
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"atom1": "SG",
|
| 92 |
+
"entity2": 1,
|
| 93 |
+
"position2": 238,
|
| 94 |
+
"atom2": "SG"
|
| 95 |
+
},
|
| 96 |
+
{
|
| 97 |
+
"entity1": 1,
|
| 98 |
+
"position1": 251,
|
| 99 |
+
"atom1": "SG",
|
| 100 |
+
"entity2": 1,
|
| 101 |
+
"position2": 257,
|
| 102 |
+
"atom2": "SG"
|
| 103 |
+
},
|
| 104 |
+
{
|
| 105 |
+
"entity1": 1,
|
| 106 |
+
"position1": 59,
|
| 107 |
+
"atom1": "SG",
|
| 108 |
+
"copy1": 1,
|
| 109 |
+
"entity2": 1,
|
| 110 |
+
"position2": 274,
|
| 111 |
+
"atom2": "SG",
|
| 112 |
+
"copy2": 1
|
| 113 |
+
},
|
| 114 |
+
{
|
| 115 |
+
"entity1": 2,
|
| 116 |
+
"position1": 22,
|
| 117 |
+
"atom1": "SG",
|
| 118 |
+
"entity2": 2,
|
| 119 |
+
"position2": 96,
|
| 120 |
+
"atom2": "SG"
|
| 121 |
+
}
|
| 122 |
+
],
|
| 123 |
+
"name": "8tzu_C__B"
|
| 124 |
+
}
|
| 125 |
+
]
|
protenix_json/8u1c_H_L_A.json
ADDED
|
@@ -0,0 +1,128 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "GLQLVQSGAELKKPGESLKISCQGSGYTFPIYWIGWVRQIPGKGLEWMGIIYPGDSDTRYSPSFEGQVTISADKSVTTAYLQWSSLKASDTAMYYCARHSEPWYPDHRFWPPYPFDIWGQGTMVTVSS",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"H"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "EIVLTQSPGTLSLSPGERATLSCRSSQTVSSGYLAWYQQKRGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYFCQHHGTSPGTFGGGTKVEIK",
|
| 20 |
+
"count": 1,
|
| 21 |
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"label_entity_id": "2",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"B"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"L"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "MLPSTIQTLTLFLTSGGVLLSLYVSASLSYLLYSDILLKFSPTEITAPTMPLDCANASNVQAVNRSATKGVTLLLPGPEWTYPRLSCPGSTFQKALLISPHRFGETKGNSAPLIIREPFVACGPNECKHFALTHYAAQPGGYYNGTRGDRNKLRHLISVKLGKIPTVENSIFHMAAWSGSACHDGKEWTYIGVDGPDNNALLKVKYGEAYTDTYHSYANNILRTQESACNCIGGNCYLMITDGSASGVSECRFLKIREGRIIKEIFPTGRVKHTEECTCGFASNKTIECACRDNRYTAKRPFVKLNVETDTAEIRLMCTDTYLDTPRPNDGSITGPCESDGDKGSGGIKGGFVHQRMKSKIGRWYSRTMSKTERMGMGLYVKYGGDPWADSDALAFSGVMVPMKEPGWYSFGFEIKDKKCDVPCIGIEMVHDGGKETWHSAATAIYCLMGSGQLLWDTVTGVDMAL",
|
| 33 |
+
"count": 1,
|
| 34 |
+
"label_entity_id": "3",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"C"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"A"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
+
{
|
| 46 |
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"entity1": 1,
|
| 47 |
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"position1": 22,
|
| 48 |
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"atom1": "SG",
|
| 49 |
+
"entity2": 1,
|
| 50 |
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|
| 51 |
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|
| 52 |
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|
| 53 |
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|
| 54 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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| 61 |
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|
| 62 |
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|
| 63 |
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|
| 64 |
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|
| 65 |
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|
| 66 |
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|
| 67 |
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|
| 68 |
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| 69 |
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|
| 70 |
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|
| 71 |
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|
| 72 |
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|
| 73 |
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|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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{
|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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|
| 82 |
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|
| 83 |
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|
| 84 |
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|
| 85 |
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{
|
| 86 |
+
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|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
+
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|
| 91 |
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|
| 92 |
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|
| 93 |
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{
|
| 94 |
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|
| 95 |
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|
| 96 |
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|
| 97 |
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|
| 98 |
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|
| 99 |
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"atom2": "SG"
|
| 100 |
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|
| 101 |
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{
|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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|
| 107 |
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"atom2": "SG"
|
| 108 |
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|
| 109 |
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{
|
| 110 |
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|
| 111 |
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|
| 112 |
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|
| 113 |
+
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|
| 114 |
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|
| 115 |
+
"atom2": "SG"
|
| 116 |
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|
| 117 |
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{
|
| 118 |
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"entity1": 3,
|
| 119 |
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|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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"atom2": "SG"
|
| 124 |
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}
|
| 125 |
+
],
|
| 126 |
+
"name": "8u1c_H_L_A"
|
| 127 |
+
}
|
| 128 |
+
]
|
protenix_json/8u31_C_B_A.json
ADDED
|
@@ -0,0 +1,96 @@
|
|
|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
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|
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|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
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{
|
| 3 |
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|
| 4 |
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|
| 5 |
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|
| 6 |
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"sequence": "HHHHHHGENLYFQGSLDSPDRPWNPPTFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDSRFRVTQLPNGRDFHMSVVRARRNDSGTYLCGAISLAPKAQIKESLRAELRVTEGNS",
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| 7 |
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| 10 |
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| 13 |
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| 14 |
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| 15 |
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|
| 16 |
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|
| 17 |
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{
|
| 18 |
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|
| 19 |
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"sequence": "AAQLTQSPSSLSASVGDRVTITCQSSQSVYNNNDLAWYQQKPGKPPKLLIYTPSSLTSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCLGGYDDDSDNAFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC",
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| 20 |
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|
| 22 |
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| 23 |
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| 24 |
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| 25 |
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| 26 |
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|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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{
|
| 31 |
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"proteinChain": {
|
| 32 |
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"sequence": "EQQLVESGGGVVQPGRSLRLSCAASGFSFSSTYWICWVRQAPGKGLEWIACIYAGSSGNTYYANWAKGRFTISKDSSSTTVFLQMNSLRAEDTAVYFCARAGGAGGGVYTLTRLDLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS",
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| 38 |
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| 39 |
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| 40 |
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| 41 |
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| 42 |
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| 43 |
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],
|
| 44 |
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| 45 |
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{
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| 46 |
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|
| 55 |
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|
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|
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| 65 |
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| 66 |
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|
| 67 |
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| 68 |
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| 69 |
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{
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| 70 |
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|
| 71 |
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|
| 72 |
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| 73 |
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| 74 |
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|
| 75 |
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|
| 76 |
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| 77 |
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{
|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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|
| 82 |
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|
| 83 |
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|
| 84 |
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|
| 85 |
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{
|
| 86 |
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|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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],
|
| 94 |
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"name": "8u31_C_B_A"
|
| 95 |
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}
|
| 96 |
+
]
|
protenix_json/8u5l_J_j_A.json
ADDED
|
@@ -0,0 +1,51 @@
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
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[
|
| 2 |
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{
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| 3 |
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"sequences": [
|
| 4 |
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{
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| 5 |
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|
| 6 |
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| 7 |
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| 10 |
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|
| 11 |
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| 12 |
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| 13 |
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|
| 14 |
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| 15 |
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|
| 16 |
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|
| 17 |
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{
|
| 18 |
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"proteinChain": {
|
| 19 |
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| 22 |
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| 23 |
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|
| 24 |
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| 25 |
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| 26 |
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|
| 27 |
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| 28 |
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|
| 29 |
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|
| 30 |
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],
|
| 31 |
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"covalent_bonds": [
|
| 32 |
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{
|
| 33 |
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|
| 34 |
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|
| 35 |
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|
| 36 |
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|
| 37 |
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|
| 38 |
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|
| 39 |
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| 40 |
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{
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| 41 |
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|
| 42 |
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| 44 |
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|
| 45 |
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|
| 46 |
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|
| 47 |
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|
| 48 |
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|
| 49 |
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"name": "8u5l_J_j_A"
|
| 50 |
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}
|
| 51 |
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]
|
protenix_json/8ukh_H_L_A.json
ADDED
|
@@ -0,0 +1,80 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
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|
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|
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|
|
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|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
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{
|
| 3 |
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"sequences": [
|
| 4 |
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{
|
| 5 |
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"proteinChain": {
|
| 6 |
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"sequence": "MGFRGNNGHNSSSSLYNGSQFIEQLNNSFTSAFLESQSMNKIGDDLAETISNELVSVLQKNSPTFLESSFDIKSEVKKHAKSMLKELIKVGLPSFENLVAENVKPPKVDPATYGIIVPVLTSLFNKVETAVGAKVSDEIWNYNSPDVSESEESLSDDFFDLEHHHHHH",
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| 7 |
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| 9 |
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| 10 |
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| 12 |
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| 13 |
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| 14 |
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| 15 |
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|
| 16 |
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| 17 |
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{
|
| 18 |
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|
| 19 |
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| 20 |
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| 22 |
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| 25 |
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| 28 |
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|
| 29 |
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|
| 30 |
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{
|
| 31 |
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|
| 32 |
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| 41 |
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| 44 |
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+
},
|
| 61 |
+
{
|
| 62 |
+
"entity1": 3,
|
| 63 |
+
"position1": 23,
|
| 64 |
+
"atom1": "SG",
|
| 65 |
+
"entity2": 3,
|
| 66 |
+
"position2": 88,
|
| 67 |
+
"atom2": "SG"
|
| 68 |
+
},
|
| 69 |
+
{
|
| 70 |
+
"entity1": 3,
|
| 71 |
+
"position1": 133,
|
| 72 |
+
"atom1": "SG",
|
| 73 |
+
"entity2": 3,
|
| 74 |
+
"position2": 193,
|
| 75 |
+
"atom2": "SG"
|
| 76 |
+
}
|
| 77 |
+
],
|
| 78 |
+
"name": "8ukh_H_L_A"
|
| 79 |
+
}
|
| 80 |
+
]
|
protenix_json/8ulj_H_L_AB.json
ADDED
|
@@ -0,0 +1,149 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "QNITEEFYQSTCSAVSKGYLSALRTGWYTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQSTPATN",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "EIVTQSPGTLSLSPGERATLSCRASQNVGSNLLAWYQQKPGQAPRLLIYGASNRATGIPDRFSGSGSGTDFTLTISRLEPEDFVVYHCQQYGSSPRTFGQGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "2",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"B"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"L"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "QVQLVESGAEAKKPGSSVKVSCKISGGTLNDYPIRWVRQAPGQGLEWMGGIIPILGTSYETQKFQGRLTLTADELTSTVYMELRYLTSEDAAVYFCATMTSPVFIDALDVWGQGTRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSENLYFQGSHHHHHH",
|
| 33 |
+
"count": 1,
|
| 34 |
+
"label_entity_id": "3",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"C"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"H"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
},
|
| 43 |
+
{
|
| 44 |
+
"proteinChain": {
|
| 45 |
+
"sequence": "FLGFLLGVGSAIASGVAVCKVLHLEGEVNKIKSALLSTNKAVVSLSNGVSVLTFKVLDLKNYIDKQLLPILNKQSCSISNIETVIEFQQKNNRLLEITREFSVNAGVTTPVSTYMLTNSELLSLINDMPITNDQKKLMSNNVQIVRQQSYSIMCIIKEEVLAYVVQLPLYGVIDTPCWKLHTSPLCTTNTKEGSNICLTRTDRGWYCDNAGSVSFFPQAETCKVQSNRVFCDTMNSLTLPSEVNLCNVDIFNPKYDCKIMTSKTDVSSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKQEGKSLYVKGEPIINFYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDELLSAIGGYIPEAPRDGQAYVRKDGEWVLLSTFLGGLVPR",
|
| 46 |
+
"count": 1,
|
| 47 |
+
"label_entity_id": "4",
|
| 48 |
+
"label_asym_id": [
|
| 49 |
+
"D"
|
| 50 |
+
],
|
| 51 |
+
"auth_asym_id": [
|
| 52 |
+
"B"
|
| 53 |
+
]
|
| 54 |
+
}
|
| 55 |
+
}
|
| 56 |
+
],
|
| 57 |
+
"covalent_bonds": [
|
| 58 |
+
{
|
| 59 |
+
"entity1": 1,
|
| 60 |
+
"position1": 12,
|
| 61 |
+
"atom1": "SG",
|
| 62 |
+
"entity2": 4,
|
| 63 |
+
"position2": 303,
|
| 64 |
+
"atom2": "SG"
|
| 65 |
+
},
|
| 66 |
+
{
|
| 67 |
+
"entity1": 1,
|
| 68 |
+
"position1": 44,
|
| 69 |
+
"atom1": "SG",
|
| 70 |
+
"entity2": 4,
|
| 71 |
+
"position2": 76,
|
| 72 |
+
"atom2": "SG"
|
| 73 |
+
},
|
| 74 |
+
{
|
| 75 |
+
"entity1": 2,
|
| 76 |
+
"position1": 22,
|
| 77 |
+
"atom1": "SG",
|
| 78 |
+
"entity2": 2,
|
| 79 |
+
"position2": 88,
|
| 80 |
+
"atom2": "SG"
|
| 81 |
+
},
|
| 82 |
+
{
|
| 83 |
+
"entity1": 3,
|
| 84 |
+
"position1": 22,
|
| 85 |
+
"atom1": "SG",
|
| 86 |
+
"entity2": 3,
|
| 87 |
+
"position2": 96,
|
| 88 |
+
"atom2": "SG"
|
| 89 |
+
},
|
| 90 |
+
{
|
| 91 |
+
"entity1": 3,
|
| 92 |
+
"position1": 148,
|
| 93 |
+
"atom1": "SG",
|
| 94 |
+
"entity2": 3,
|
| 95 |
+
"position2": 204,
|
| 96 |
+
"atom2": "SG"
|
| 97 |
+
},
|
| 98 |
+
{
|
| 99 |
+
"entity1": 4,
|
| 100 |
+
"position1": 19,
|
| 101 |
+
"atom1": "SG",
|
| 102 |
+
"entity2": 4,
|
| 103 |
+
"position2": 154,
|
| 104 |
+
"atom2": "SG"
|
| 105 |
+
},
|
| 106 |
+
{
|
| 107 |
+
"entity1": 4,
|
| 108 |
+
"position1": 177,
|
| 109 |
+
"atom1": "SG",
|
| 110 |
+
"entity2": 4,
|
| 111 |
+
"position2": 207,
|
| 112 |
+
"atom2": "SG"
|
| 113 |
+
},
|
| 114 |
+
{
|
| 115 |
+
"entity1": 4,
|
| 116 |
+
"position1": 186,
|
| 117 |
+
"atom1": "SG",
|
| 118 |
+
"entity2": 4,
|
| 119 |
+
"position2": 197,
|
| 120 |
+
"atom2": "SG"
|
| 121 |
+
},
|
| 122 |
+
{
|
| 123 |
+
"entity1": 4,
|
| 124 |
+
"position1": 222,
|
| 125 |
+
"atom1": "SG",
|
| 126 |
+
"entity2": 4,
|
| 127 |
+
"position2": 231,
|
| 128 |
+
"atom2": "SG"
|
| 129 |
+
},
|
| 130 |
+
{
|
| 131 |
+
"entity1": 4,
|
| 132 |
+
"position1": 246,
|
| 133 |
+
"atom1": "SG",
|
| 134 |
+
"entity2": 4,
|
| 135 |
+
"position2": 257,
|
| 136 |
+
"atom2": "SG"
|
| 137 |
+
},
|
| 138 |
+
{
|
| 139 |
+
"entity1": 4,
|
| 140 |
+
"position1": 280,
|
| 141 |
+
"atom1": "SG",
|
| 142 |
+
"entity2": 4,
|
| 143 |
+
"position2": 286,
|
| 144 |
+
"atom2": "SG"
|
| 145 |
+
}
|
| 146 |
+
],
|
| 147 |
+
"name": "8ulj_H_L_AB"
|
| 148 |
+
}
|
| 149 |
+
]
|
protenix_json/8uo9_B__A.json
ADDED
|
@@ -0,0 +1,33 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "MGYYRGEGTQDEEEGGASSDATEGHDEDDEIYEGEYQGIPRAESGGKGERMADGAPLAGVRGGLSDGEGPPGGRGEAQRRKEREELAQQYEAILRECGHGRFQWTLYFVLGLALMADGVEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSWLCMFWMIGGVYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVFAIGALTTQPESPRFFLENGKHDEAWMVLKQVHDTNMRAKGHPERVFSVTHIKTIHQEDELIEIQSDTGTWYQRWGVRALSLGGQVWGNFLSCFGPEYRRITLMMMGVWFTMSFSYYGLTVWFPDMIRHLQAVDYASRTKVFPGERVEHVTFNFTLENQIHRGGQYFNDKFIGLRLKSVSFEDSLFEECYFEDVTSSNTFFRNCTFINTVFYNTDLFEYKFVNSRLINSTFLHNKEGCPLDVTGTGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVMSCVSCFFLSFGNSESAMIALLCLFGGVSIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFTSFVGITKAAPILFASAALALGSSLALKLPETRGQVLQ",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "QVQLVESGGGLVQPGGSLRLSCAASGSIFNMRVMGWYRQAPGEQRESVASMASGDKTTYADSVKGRFTISRDNAKNTVALQMNSLKPEDTAVYYCHAVDLTRNGPRVYWGQGTQVTVSSAAAENLYFQGGSGHHHHHHHHHH",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "2",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"B"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"B"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
}
|
| 30 |
+
],
|
| 31 |
+
"name": "8uo9_B__A"
|
| 32 |
+
}
|
| 33 |
+
]
|
protenix_json/8uoa_B__A.json
ADDED
|
@@ -0,0 +1,33 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "MGYYRGEGTQDEEEGGASSDATEGHDEDDEIYEGEYQGIPRAESGGKGERMADGAPLAGVRGGLSDGEGPPGGRGEAQRRKEREELAQQYEAILRECGHGRFQWTLYFVLGLALMADGVEVFVVGFVLPSAEKDMCLSDSNKGMLGLIVYLGMMVGAFLWGGLADRLGRRQCLLISLSVNSVFAFFSSFVQGYGTFLFCRLLSGVGIGGSIPIVFSYFSEFLAQEKRGEHLSWLCMFWMIGGVYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVLVCAFPSVFAIGALTTQPESPRFFLENGKHDEAWMVLKQVHDTNMRAKGHPERVFSVTHIKTIHQEDELIEIQSDTGTWYQRWGVRALSLGGQVWGNFLSCFGPEYRRITLMMMGVWFTMSFSYYGLTVWFPDMIRHLQAVDYASRTKVFPGERVEHVTFNFTLENQIHRGGQYFNDKFIGLRLKSVSFEDSLFEECYFEDVTSSNTFFRNCTFINTVFYNTDLFEYKFVNSRLINSTFLHNKEGCPLDVTGTGEGAYMVYFVSFLGTLAVLPGNIVSALLMDKIGRLRMLAGSSVMSCVSCFFLSFGNSESAMIALLCLFGGVSIASWNALDVLTVELYPSDKRTTAFGFLNALCKLAAVLGISIFTSFVGITKAAPILFASAALALGSSLALKLPETRGQVLQ",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "QVQLVESGGGLVQPGGSLRLSCAASGSIFNMRVMGWYRQAPGEQRESVASMASGDKTTYADSVKGRFTISRDNAKNTVALQMNSLKPEDTAVYYCHAVDLTRNGPRVYWGQGTQVTVSSAAAENLYFQGGSGHHHHHHHHHH",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "2",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"B"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"B"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
}
|
| 30 |
+
],
|
| 31 |
+
"name": "8uoa_B__A"
|
| 32 |
+
}
|
| 33 |
+
]
|
protenix_json/8ut2_H_G_AB.json
ADDED
|
@@ -0,0 +1,117 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
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"sequence": "MGLKVNVSAIFMAVLLTLQTPTGQIHWGNLSKIGVVGIGSASYKVMTRSSHQSLVIKLMPNITLLNNCTRVEIAEYRRLLRTVLEPIRDALNAMTQNIRPVQSVASSRRHKR",
|
| 7 |
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"count": 1,
|
| 8 |
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|
| 9 |
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|
| 10 |
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"A"
|
| 11 |
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],
|
| 12 |
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|
| 13 |
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"A"
|
| 14 |
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]
|
| 15 |
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|
| 16 |
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},
|
| 17 |
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{
|
| 18 |
+
"proteinChain": {
|
| 19 |
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"sequence": "FAGVVLAGAALGVATAAQITAGIALHQSMLNSQAIDNLRASLETTNQAIEAIRQAGQGMILAVQGVQDYINNELIPSMNQLSCDLIGQKLGLKLLRYYTEILSLFGPSLRDPISAEISIQALSYALGGDINKVLEKLGYSGGDLLGILESRGIKARITHVDTESYFIVLSIAYPTLSEIKGVIVHRLEGVSYNIGSQEWYTTVPKYVATQGYLISNFDESSCTFMPEGTVCSQNALYPMSPLLQECLRGSTKSCARTLVSGSFGNRFILSQGNLIANCASILCKCYTTGTIINQDPDKILTYIAADHCPVVEVNGVTIQVGSRRYPDAVYLHRIDLGPPISLGRLDVGTNLGNAIAKLEDAKELLESSDQILRSMKGLSSTSIGVDDDDKAGWSHPQFEKGGGSGGGSGGGSWSHPQFEK",
|
| 20 |
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"count": 1,
|
| 21 |
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"label_entity_id": "2",
|
| 22 |
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|
| 23 |
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"B"
|
| 24 |
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],
|
| 25 |
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"auth_asym_id": [
|
| 26 |
+
"B"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "MGWSCIILFLVATATGVHSDVQITQSPSYLAASPGETITINCRASKSISKYLAWYQEKPGKTNELLIYSGSTLQSGIPSRFRGSGSGTDFTLTISSLEPEDFAMYYCQQHNEYTLTFGGGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC",
|
| 33 |
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"count": 1,
|
| 34 |
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"label_entity_id": "3",
|
| 35 |
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|
| 36 |
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|
| 37 |
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|
| 38 |
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|
| 39 |
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"G"
|
| 40 |
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|
| 41 |
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}
|
| 42 |
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},
|
| 43 |
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{
|
| 44 |
+
"proteinChain": {
|
| 45 |
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"sequence": "MGWSCIILFLVATATGVHSDVQLQESGPGLVKPSQSLSLTCTVSGYSITSDYAWNWIRQFPGNKLEWMGYISYTLTTGYNPSLKSRISITRDSSKNQFFLQLNSVTTEDTATYYCARSGWLLPYWYFDVWGAGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQGPTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK",
|
| 46 |
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"count": 1,
|
| 47 |
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"label_entity_id": "4",
|
| 48 |
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"label_asym_id": [
|
| 49 |
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|
| 50 |
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|
| 51 |
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|
| 52 |
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"H"
|
| 53 |
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]
|
| 54 |
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}
|
| 55 |
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}
|
| 56 |
+
],
|
| 57 |
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"covalent_bonds": [
|
| 58 |
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{
|
| 59 |
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|
| 60 |
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|
| 61 |
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|
| 62 |
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|
| 63 |
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|
| 64 |
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|
| 65 |
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|
| 66 |
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{
|
| 67 |
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|
| 68 |
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|
| 69 |
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|
| 70 |
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|
| 71 |
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|
| 72 |
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|
| 73 |
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|
| 74 |
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{
|
| 75 |
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|
| 76 |
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|
| 77 |
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|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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|
| 82 |
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{
|
| 83 |
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|
| 84 |
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|
| 85 |
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|
| 86 |
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|
| 87 |
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"position2": 283,
|
| 88 |
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"atom2": "SG"
|
| 89 |
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},
|
| 90 |
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{
|
| 91 |
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|
| 92 |
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|
| 93 |
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|
| 94 |
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|
| 95 |
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|
| 96 |
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"atom2": "SG"
|
| 97 |
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|
| 98 |
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{
|
| 99 |
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|
| 100 |
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|
| 101 |
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|
| 102 |
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|
| 103 |
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|
| 104 |
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"atom2": "SG"
|
| 105 |
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|
| 106 |
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{
|
| 107 |
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|
| 108 |
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|
| 109 |
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|
| 110 |
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|
| 111 |
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|
| 112 |
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"atom2": "SG"
|
| 113 |
+
}
|
| 114 |
+
],
|
| 115 |
+
"name": "8ut2_H_G_AB"
|
| 116 |
+
}
|
| 117 |
+
]
|
protenix_json/8uwz_C_D_F.json
ADDED
|
@@ -0,0 +1,104 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "EVQLVESGGGLVQPGGSLRLSCAASGFDLWYYSIHWVRQAPGKGLEWVAYIYPSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARHAWYYGWGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
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],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"C"
|
| 14 |
+
]
|
| 15 |
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}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "DIQMTQSPSSLSASVGDRVTITCRASQAAYGRVAWYQQKPGKAPKLLIYKASELYAGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQRGWYLFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVSWYVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC",
|
| 20 |
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"count": 1,
|
| 21 |
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"label_entity_id": "2",
|
| 22 |
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"label_asym_id": [
|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"auth_asym_id": [
|
| 26 |
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"D"
|
| 27 |
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|
| 28 |
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}
|
| 29 |
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},
|
| 30 |
+
{
|
| 31 |
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"proteinChain": {
|
| 32 |
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"sequence": "APMAEGGGQNHHEVVKFMDVYQRSYCHPIETLVDIFQEYPDEIEYIFKPSCVPLMRCGGCCNDEGLECVPTEESNITMQIMRIKPHQGQHIGEMSFLQHNKCECRPKKDRARQENCDKPRR",
|
| 33 |
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|
| 34 |
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|
| 35 |
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| 36 |
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|
| 37 |
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| 38 |
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|
| 39 |
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|
| 40 |
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|
| 41 |
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|
| 42 |
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|
| 43 |
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|
| 44 |
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| 45 |
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|
| 46 |
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|
| 47 |
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|
| 48 |
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|
| 49 |
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|
| 50 |
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|
| 51 |
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|
| 52 |
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| 53 |
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{
|
| 54 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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|
| 61 |
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{
|
| 62 |
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"entity1": 2,
|
| 63 |
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|
| 64 |
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|
| 65 |
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|
| 66 |
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"position2": 88,
|
| 67 |
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"atom2": "SG"
|
| 68 |
+
},
|
| 69 |
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{
|
| 70 |
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"entity1": 2,
|
| 71 |
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"position1": 134,
|
| 72 |
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"atom1": "SG",
|
| 73 |
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"entity2": 2,
|
| 74 |
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"position2": 194,
|
| 75 |
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"atom2": "SG"
|
| 76 |
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},
|
| 77 |
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{
|
| 78 |
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"entity1": 3,
|
| 79 |
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|
| 80 |
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|
| 81 |
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"entity2": 3,
|
| 82 |
+
"position2": 68,
|
| 83 |
+
"atom2": "SG"
|
| 84 |
+
},
|
| 85 |
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{
|
| 86 |
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"entity1": 3,
|
| 87 |
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"position1": 57,
|
| 88 |
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"atom1": "SG",
|
| 89 |
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"entity2": 3,
|
| 90 |
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"position2": 102,
|
| 91 |
+
"atom2": "SG"
|
| 92 |
+
},
|
| 93 |
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{
|
| 94 |
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"entity1": 3,
|
| 95 |
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"position1": 61,
|
| 96 |
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"atom1": "SG",
|
| 97 |
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"entity2": 3,
|
| 98 |
+
"position2": 104,
|
| 99 |
+
"atom2": "SG"
|
| 100 |
+
}
|
| 101 |
+
],
|
| 102 |
+
"name": "8uwz_C_D_F"
|
| 103 |
+
}
|
| 104 |
+
]
|
protenix_json/8vuh_H_L_A.json
ADDED
|
@@ -0,0 +1,112 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "VNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQLNATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQFDPGTKNVTALLMEAKELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGILGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTLSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHK",
|
| 7 |
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"count": 1,
|
| 8 |
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|
| 9 |
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|
| 10 |
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"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "LQLQESGPGLVKPSQTLSLTCTVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGNTNYNPSLKSRVTVSVDKSKNQFSLKLTSVTAADTAVYYCARDVSGGVNWFDPWGQGTLVTV",
|
| 20 |
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"count": 1,
|
| 21 |
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"label_entity_id": "4",
|
| 22 |
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|
| 23 |
+
"E"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"H"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "NFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSTVVFGGGTKLTV",
|
| 33 |
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"count": 1,
|
| 34 |
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"label_entity_id": "5",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"G"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"L"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
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{
|
| 46 |
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|
| 47 |
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|
| 48 |
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|
| 49 |
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|
| 50 |
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|
| 51 |
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|
| 52 |
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|
| 53 |
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{
|
| 54 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
+
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|
| 58 |
+
"position2": 782,
|
| 59 |
+
"atom2": "N"
|
| 60 |
+
},
|
| 61 |
+
{
|
| 62 |
+
"entity1": 1,
|
| 63 |
+
"position1": 53,
|
| 64 |
+
"atom1": "SG",
|
| 65 |
+
"entity2": 1,
|
| 66 |
+
"position2": 282,
|
| 67 |
+
"atom2": "SG"
|
| 68 |
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},
|
| 69 |
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{
|
| 70 |
+
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|
| 71 |
+
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|
| 72 |
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"atom1": "SG",
|
| 73 |
+
"entity2": 1,
|
| 74 |
+
"position2": 428,
|
| 75 |
+
"atom2": "SG"
|
| 76 |
+
},
|
| 77 |
+
{
|
| 78 |
+
"entity1": 1,
|
| 79 |
+
"position1": 410,
|
| 80 |
+
"atom1": "SG",
|
| 81 |
+
"entity2": 1,
|
| 82 |
+
"position2": 429,
|
| 83 |
+
"atom2": "SG"
|
| 84 |
+
},
|
| 85 |
+
{
|
| 86 |
+
"entity1": 1,
|
| 87 |
+
"position1": 718,
|
| 88 |
+
"atom1": "SG",
|
| 89 |
+
"entity2": 1,
|
| 90 |
+
"position2": 772,
|
| 91 |
+
"atom2": "SG"
|
| 92 |
+
},
|
| 93 |
+
{
|
| 94 |
+
"entity1": 2,
|
| 95 |
+
"position1": 21,
|
| 96 |
+
"atom1": "SG",
|
| 97 |
+
"entity2": 2,
|
| 98 |
+
"position2": 95,
|
| 99 |
+
"atom2": "SG"
|
| 100 |
+
},
|
| 101 |
+
{
|
| 102 |
+
"entity1": 3,
|
| 103 |
+
"position1": 22,
|
| 104 |
+
"atom1": "SG",
|
| 105 |
+
"entity2": 3,
|
| 106 |
+
"position2": 91,
|
| 107 |
+
"atom2": "SG"
|
| 108 |
+
}
|
| 109 |
+
],
|
| 110 |
+
"name": "8vuh_H_L_A"
|
| 111 |
+
}
|
| 112 |
+
]
|
protenix_json/8vuq_G_I_A.json
ADDED
|
@@ -0,0 +1,88 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "KIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQLNATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYSWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQFDPGTKNVTALLMEAKELEARVIILSASEDDAATVYRAAAMLNMTGSGYVWLVGEREISGNALRYAPDGILGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFANYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQ",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "EVQLVESGGGLVQPGRSLRLSCAASGFTFDDYAMHWVRQVPGKGLEWVSGISWSSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKDRASSWYAYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "3",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"C"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"G"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "NFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYDDNQRPSGVPNRFSGSIDSSSNSASLIISGLKTEDEADYYCQSTRVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT",
|
| 33 |
+
"count": 1,
|
| 34 |
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"label_entity_id": "4",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"D"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"I"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
+
{
|
| 46 |
+
"entity1": 1,
|
| 47 |
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|
| 48 |
+
"atom1": "SG",
|
| 49 |
+
"entity2": 1,
|
| 50 |
+
"position2": 284,
|
| 51 |
+
"atom2": "SG"
|
| 52 |
+
},
|
| 53 |
+
{
|
| 54 |
+
"entity1": 2,
|
| 55 |
+
"position1": 22,
|
| 56 |
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|
| 57 |
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"entity2": 2,
|
| 58 |
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"position2": 96,
|
| 59 |
+
"atom2": "SG"
|
| 60 |
+
},
|
| 61 |
+
{
|
| 62 |
+
"entity1": 2,
|
| 63 |
+
"position1": 149,
|
| 64 |
+
"atom1": "SG",
|
| 65 |
+
"entity2": 2,
|
| 66 |
+
"position2": 205,
|
| 67 |
+
"atom2": "SG"
|
| 68 |
+
},
|
| 69 |
+
{
|
| 70 |
+
"entity1": 3,
|
| 71 |
+
"position1": 22,
|
| 72 |
+
"atom1": "SG",
|
| 73 |
+
"entity2": 3,
|
| 74 |
+
"position2": 91,
|
| 75 |
+
"atom2": "SG"
|
| 76 |
+
},
|
| 77 |
+
{
|
| 78 |
+
"entity1": 3,
|
| 79 |
+
"position1": 134,
|
| 80 |
+
"atom1": "SG",
|
| 81 |
+
"entity2": 3,
|
| 82 |
+
"position2": 193,
|
| 83 |
+
"atom2": "SG"
|
| 84 |
+
}
|
| 85 |
+
],
|
| 86 |
+
"name": "8vuq_G_I_A"
|
| 87 |
+
}
|
| 88 |
+
]
|
protenix_json/8vuy_H_L_A.json
ADDED
|
@@ -0,0 +1,88 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "KIVNIGAVLSTRKHEQMFREAVNQANKRHGSWKIQLQATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPTPNDHFTPTPVSYTAGFYRIPVLGLTTRMSIYSDKSIHLSFLRTVPPYSHQSSVWFEMMRVYNWNHIILLVSDDHEGRAAQKRLETLLEERESKAEKVLQFDPGTKNVTALLMEARELEARVIILSASEDDAATVYRAAAMLDMTGSGYVWLVGEREISGNALRYAPDGIIGLQLINGKNESAHISDAVGVVAQAVHELLEKENITDPPRGCVGNTNIWKTGPLFKRVLMSSKYADGVTGRVEFNEDGDRKFAQYSIMNLQNRKLVQVGIYNGTHVIPNDRKIIWPGGETEKPRGYQMSTRLKIVTIHQEPFVYVKPTMSDGTCKEEFTVNGDPVKKVICTGPNDTSPGSPRHTVPQCCYGFCIDLLIKLARTMQFTYEVHLVADGKFGTQERVQNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMNPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQQVSLSILKSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMIVAGGIVAGIFLIFIEIAYKSRA",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "LQLQESGPGLVKPSQTLSLTCTVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGNTNYNPSLKSRVTVSVDKSKNQFSLKLTSVTAADTAVYYCARDVSGGVNWFDPWGQGTLV",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "3",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"E"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"H"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "NFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQSYDSSTVVFGGGTKLT",
|
| 33 |
+
"count": 1,
|
| 34 |
+
"label_entity_id": "4",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"H"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"L"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
+
{
|
| 46 |
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"entity1": 1,
|
| 47 |
+
"position1": 55,
|
| 48 |
+
"atom1": "SG",
|
| 49 |
+
"entity2": 1,
|
| 50 |
+
"position2": 284,
|
| 51 |
+
"atom2": "SG"
|
| 52 |
+
},
|
| 53 |
+
{
|
| 54 |
+
"entity1": 1,
|
| 55 |
+
"position1": 396,
|
| 56 |
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"atom1": "SG",
|
| 57 |
+
"entity2": 1,
|
| 58 |
+
"position2": 430,
|
| 59 |
+
"atom2": "SG"
|
| 60 |
+
},
|
| 61 |
+
{
|
| 62 |
+
"entity1": 1,
|
| 63 |
+
"position1": 412,
|
| 64 |
+
"atom1": "SG",
|
| 65 |
+
"entity2": 1,
|
| 66 |
+
"position2": 431,
|
| 67 |
+
"atom2": "SG"
|
| 68 |
+
},
|
| 69 |
+
{
|
| 70 |
+
"entity1": 2,
|
| 71 |
+
"position1": 21,
|
| 72 |
+
"atom1": "SG",
|
| 73 |
+
"entity2": 2,
|
| 74 |
+
"position2": 95,
|
| 75 |
+
"atom2": "SG"
|
| 76 |
+
},
|
| 77 |
+
{
|
| 78 |
+
"entity1": 3,
|
| 79 |
+
"position1": 22,
|
| 80 |
+
"atom1": "SG",
|
| 81 |
+
"entity2": 3,
|
| 82 |
+
"position2": 91,
|
| 83 |
+
"atom2": "SG"
|
| 84 |
+
}
|
| 85 |
+
],
|
| 86 |
+
"name": "8vuy_H_L_A"
|
| 87 |
+
}
|
| 88 |
+
]
|
protenix_json/8vvk_D_C_B.json
ADDED
|
@@ -0,0 +1,112 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
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|
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|
|
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|
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|
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|
|
|
|
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|
|
|
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|
|
|
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|
| 1 |
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[
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| 2 |
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| 3 |
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| 4 |
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| 5 |
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| 6 |
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| 17 |
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| 18 |
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| 31 |
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| 32 |
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| 111 |
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| 112 |
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|
protenix_json/8w0y_A_B_D.json
ADDED
|
@@ -0,0 +1,152 @@
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|
|
|
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|
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|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
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|
|
|
|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
|
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|
|
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|
|
|
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|
|
|
|
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|
|
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|
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|
|
|
|
|
|
|
|
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|
|
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|
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|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
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|
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|
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|
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|
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|
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|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
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{
|
| 3 |
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|
| 4 |
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|
| 5 |
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|
| 6 |
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| 16 |
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| 17 |
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| 18 |
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|
| 19 |
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| 26 |
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| 28 |
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| 30 |
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| 150 |
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"name": "8w0y_A_B_D"
|
| 151 |
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}
|
| 152 |
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]
|
protenix_json/8w9j_H_L_C.json
ADDED
|
@@ -0,0 +1,112 @@
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
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|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
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|
|
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|
|
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|
|
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|
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|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
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"sequence": "DIVLTQSPGSLAMSLGQRATISCKASQSVDYDGDSYMNWYQQKPGQPPKLLIFAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN",
|
| 7 |
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|
| 8 |
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|
| 9 |
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|
| 10 |
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"A"
|
| 11 |
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|
| 12 |
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"auth_asym_id": [
|
| 13 |
+
"L"
|
| 14 |
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]
|
| 15 |
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}
|
| 16 |
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},
|
| 17 |
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{
|
| 18 |
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"proteinChain": {
|
| 19 |
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"sequence": "PVQLQQSGPELVKPGASVRISCKASGYTFTRYNIHWVKQRPGQGLEWIGWIYPGDGNTFYNEKFKGKATLTADKSSSTAYMQLSSLTSEDSAVYFCTRSYSESGQGHAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRG",
|
| 20 |
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| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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"H"
|
| 27 |
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|
| 28 |
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}
|
| 29 |
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},
|
| 30 |
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{
|
| 31 |
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"proteinChain": {
|
| 32 |
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"sequence": "GSHVTLKIEMKKMNKLQNISEELQRNISLQLMSNMNISNKIRNLSTTLQTIATKLCRELYSKEQEHKCKPCPRRWIWHKDSCYFLSDDVQTWQESKMACAAQNASLLKINNKNALEFIKSQSRSYDYWLGLSPEEDSTRGMRVDNIINSSAWVIRNAPDLNNMYCGYINRLYVQYYHCTYKKRMICEKMANPVQLGSTYFREA",
|
| 33 |
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| 34 |
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|
| 35 |
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| 36 |
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|
| 37 |
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|
| 38 |
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|
| 39 |
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"C"
|
| 40 |
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|
| 41 |
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|
| 42 |
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|
| 43 |
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],
|
| 44 |
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|
| 45 |
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|
| 46 |
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| 47 |
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|
| 48 |
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|
| 49 |
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|
| 50 |
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|
| 51 |
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|
| 52 |
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| 53 |
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|
| 54 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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},
|
| 61 |
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{
|
| 62 |
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|
| 63 |
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|
| 64 |
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|
| 65 |
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|
| 66 |
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|
| 67 |
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|
| 68 |
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|
| 69 |
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{
|
| 70 |
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|
| 71 |
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|
| 72 |
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|
| 73 |
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|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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{
|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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"entity2": 3,
|
| 82 |
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"position2": 68,
|
| 83 |
+
"atom2": "SG"
|
| 84 |
+
},
|
| 85 |
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{
|
| 86 |
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"entity1": 3,
|
| 87 |
+
"position1": 71,
|
| 88 |
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"atom1": "SG",
|
| 89 |
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"entity2": 3,
|
| 90 |
+
"position2": 82,
|
| 91 |
+
"atom2": "SG"
|
| 92 |
+
},
|
| 93 |
+
{
|
| 94 |
+
"entity1": 3,
|
| 95 |
+
"position1": 99,
|
| 96 |
+
"atom1": "SG",
|
| 97 |
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"entity2": 3,
|
| 98 |
+
"position2": 186,
|
| 99 |
+
"atom2": "SG"
|
| 100 |
+
},
|
| 101 |
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{
|
| 102 |
+
"entity1": 3,
|
| 103 |
+
"position1": 165,
|
| 104 |
+
"atom1": "SG",
|
| 105 |
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"entity2": 3,
|
| 106 |
+
"position2": 178,
|
| 107 |
+
"atom2": "SG"
|
| 108 |
+
}
|
| 109 |
+
],
|
| 110 |
+
"name": "8w9j_H_L_C"
|
| 111 |
+
}
|
| 112 |
+
]
|
protenix_json/8wej_H_L_B.json
ADDED
|
@@ -0,0 +1,72 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "MGNWAVNEGLSIFVILVWLGLNVFLFVWYYRVYDIPPKFFYTRKLLGSALALARAPAACLNFNCMLILLPVCRNLLSFLRGSSACCSTRVRRQLDRNLTFHKMVAWMIALHSAIHTIAHLFNVEWCVNARVNNSDPYSVALSELGDRQNESYLNFARKRIKNPEGGLYLAVTLLAGITGVVITLCLILIITSSTKTIRRSYFEVFWYTHHLFVIFFIGLAIHGAERIVRGQTAESLAVHNITVCEQKISEWGKIKECPIPQFAGNPPMTWKWIVGPMFLYLCERLVRFWRSQQKVVITKVVTHPFKTIELQMKKKGFKMEVGQYIFVKCPKVSKLEWHPFTLTSAPEEDFFSIHIRIVGDWTEGLFNACGCDKQEFQDAWKLPKIAVDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNATNLKLKKIYFYWLCRDTHAFEWFADLLQLLESQMQERNNAGFLSYNIYLTGWDESQANHFAVHHDEEKDVITGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGPEALAETLSKQSISNSESGPRGVHFIFNKENF",
|
| 7 |
+
"count": 1,
|
| 8 |
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|
| 9 |
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|
| 10 |
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|
| 11 |
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|
| 12 |
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"auth_asym_id": [
|
| 13 |
+
"B"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "MKKNIAFLLASMFVFSIATNAYADVQLQESGPGLVKPSQSLSLTCSVTGYSLTSGSFWSWIRQFPGNKLEWMGYITYDGTSHFNPSLKSRFSITRDTSKNQFFLKLNSVTTEDTATYYCTRDPYRYDAMDFWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDLEHHHHHH",
|
| 20 |
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|
| 21 |
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|
| 22 |
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| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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|
| 27 |
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|
| 28 |
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}
|
| 29 |
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},
|
| 30 |
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{
|
| 31 |
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"proteinChain": {
|
| 32 |
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"sequence": "MKKNIAFLLASMFVFSIATNAYADIQLTQTTSSLSASLGDRVTISCRASQDISNYLNWYQQKPDGTVKLLIYYTSKLHSGVPSRFTASGSGRDYSLAISNLEQEDIATYFCQQVFSLPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE",
|
| 33 |
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|
| 34 |
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|
| 35 |
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|
| 36 |
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|
| 37 |
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|
| 38 |
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| 39 |
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|
| 40 |
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|
| 41 |
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}
|
| 42 |
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}
|
| 43 |
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],
|
| 44 |
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|
| 45 |
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{
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| 46 |
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|
| 47 |
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|
| 48 |
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|
| 49 |
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|
| 50 |
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|
| 51 |
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|
| 52 |
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|
| 53 |
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{
|
| 54 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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|
| 61 |
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{
|
| 62 |
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"entity1": 3,
|
| 63 |
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"position1": 46,
|
| 64 |
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"atom1": "SG",
|
| 65 |
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"entity2": 3,
|
| 66 |
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"position2": 111,
|
| 67 |
+
"atom2": "SG"
|
| 68 |
+
}
|
| 69 |
+
],
|
| 70 |
+
"name": "8wej_H_L_B"
|
| 71 |
+
}
|
| 72 |
+
]
|
protenix_json/8wo4_B_A_F.json
ADDED
|
@@ -0,0 +1,138 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "SDIQMTQSPFSLSASVGDRVTITCRASQSISSHLNWYQQKPGKAPKFLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
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|
| 11 |
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],
|
| 12 |
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"auth_asym_id": [
|
| 13 |
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"A"
|
| 14 |
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]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "SEVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARWGGKRGGAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT",
|
| 20 |
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"count": 1,
|
| 21 |
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"label_entity_id": "2",
|
| 22 |
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|
| 23 |
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|
| 24 |
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],
|
| 25 |
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"auth_asym_id": [
|
| 26 |
+
"B"
|
| 27 |
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]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "DVGCSVDFSKKETRCGTGVFIYNDVEAWRDRYKYHPDSPRRLAAAVKQAWEEGICGISSVSRMENIMWKSVEGELNAILEENGVQLTVVVGSVKNPMWRGPQRLPVPVNELPHGWKAWGKSYFVRAAKTNNSFVVDGDTLKECPLEHRAWNSFLVEDHGFGVFHTSVWLKVREDYSLECDPAVIGTAVKGREAAHSDLGYWIESEKNDTWRLKRAHLIEMKTCEWPKSHTLWTDGVEESDLIIPKSLAGPLSHHNTREGYRTQVKGPWHSEELEIRFEECPGTKVYVEETCGTRGPSLRSTTASGRVIEEWCCRECTMPPLSFRAKDGCWYGMEIRPRKEPESNLVRSMVTAGTKHHHHHH",
|
| 33 |
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"count": 1,
|
| 34 |
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"label_entity_id": "3",
|
| 35 |
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"label_asym_id": [
|
| 36 |
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|
| 37 |
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|
| 38 |
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|
| 39 |
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|
| 40 |
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]
|
| 41 |
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|
| 42 |
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}
|
| 43 |
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],
|
| 44 |
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"covalent_bonds": [
|
| 45 |
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{
|
| 46 |
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|
| 47 |
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|
| 48 |
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|
| 49 |
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|
| 50 |
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|
| 51 |
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|
| 52 |
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|
| 53 |
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{
|
| 54 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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},
|
| 61 |
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{
|
| 62 |
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"entity1": 1,
|
| 63 |
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|
| 64 |
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"atom1": "SG",
|
| 65 |
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"entity2": 2,
|
| 66 |
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|
| 67 |
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|
| 68 |
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|
| 69 |
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{
|
| 70 |
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|
| 71 |
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|
| 72 |
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|
| 73 |
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|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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{
|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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|
| 82 |
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|
| 83 |
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|
| 84 |
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|
| 85 |
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{
|
| 86 |
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|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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{
|
| 94 |
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|
| 95 |
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|
| 96 |
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|
| 97 |
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|
| 98 |
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|
| 99 |
+
"atom2": "SG"
|
| 100 |
+
},
|
| 101 |
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{
|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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|
| 107 |
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|
| 108 |
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|
| 109 |
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{
|
| 110 |
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|
| 111 |
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|
| 112 |
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|
| 113 |
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|
| 114 |
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|
| 115 |
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"atom2": "SG"
|
| 116 |
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|
| 117 |
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{
|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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|
| 122 |
+
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|
| 123 |
+
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|
| 124 |
+
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|
| 125 |
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{
|
| 126 |
+
"entity1": 3,
|
| 127 |
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|
| 128 |
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"atom1": "SG",
|
| 129 |
+
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|
| 130 |
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|
| 131 |
+
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|
| 132 |
+
"atom2": "SG",
|
| 133 |
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|
| 134 |
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}
|
| 135 |
+
],
|
| 136 |
+
"name": "8wo4_B_A_F"
|
| 137 |
+
}
|
| 138 |
+
]
|
protenix_json/8wz3_D_F_A.json
ADDED
|
@@ -0,0 +1,128 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
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"sequence": "QIQLVQSGPELKKPGETVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLETSASTAYLQINNLKNEDTGIYFCARYYYGPFYWGQGTLVTVST",
|
| 7 |
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"count": 1,
|
| 8 |
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"label_entity_id": "1",
|
| 9 |
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|
| 10 |
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|
| 11 |
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],
|
| 12 |
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"auth_asym_id": [
|
| 13 |
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"D"
|
| 14 |
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]
|
| 15 |
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|
| 16 |
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},
|
| 17 |
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{
|
| 18 |
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"proteinChain": {
|
| 19 |
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"sequence": "DIQMTQSPASLSASVGETVTITCRSSGNIHNFLTWYQQKQGKSPQFLVYNAKTLADGVSSRFSGSGSGTQFSLKINSLQPEDFGIYYCQHFWTTPYTFGGGTKLEIK",
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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|
| 24 |
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|
| 25 |
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|
| 26 |
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"F"
|
| 27 |
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|
| 28 |
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|
| 29 |
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|
| 30 |
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{
|
| 31 |
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"proteinChain": {
|
| 32 |
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"sequence": "QNITEEFYQSTCSAVSKGYLSALRTGWYTSVITIELSNIKENKCNGTDAKVKLIKQELDKYKNAVTELQLLMQSTPATNNRARRELPRFMNYTLNNAKKTNVTLSKKRKRRFLGFLLGVGSAIASGVAVCKVLHLEGEVNKIKSALLSTNKAVVSLSNGVSVLTFKVLDLKNYIDKQLLPILNKQSCSISNIETVIEFQQKNNRLLEITREFSVNAGVTTPVSTYMLTNSELLSLINDMPITNDQKKLMSNNVQIVRQQSYSIMCIIKEEVLAYVVQLPLYGVIDTPCWKLHTSPLCTTNTKEGSNICLTRTDRGWYCDNAGSVSFFPQAETCKVQSNRVFCDTMNSLTLPSEVNLCNVDIFNPKYDCKIMTSKTDVSSSVITSLGAIVSCYGKTKCTASNKNRGIIKTFSNGCDYVSNKGVDTVSVGNTLYYVNKQEGKSLYVKGEPIINFYDPLVFPSDEFDASISQVNEKINQSLAFIRKSDEL",
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| 33 |
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| 34 |
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| 35 |
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| 38 |
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| 39 |
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| 40 |
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| 41 |
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| 42 |
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| 43 |
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| 44 |
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| 45 |
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| 46 |
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|
| 47 |
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| 48 |
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| 49 |
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|
| 50 |
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|
| 51 |
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|
| 52 |
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| 53 |
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{
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| 54 |
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|
| 55 |
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|
| 56 |
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| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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| 61 |
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{
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| 62 |
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|
| 63 |
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|
| 64 |
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|
| 65 |
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|
| 66 |
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|
| 67 |
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|
| 68 |
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| 69 |
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{
|
| 70 |
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|
| 71 |
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|
| 72 |
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|
| 73 |
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|
| 74 |
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|
| 75 |
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|
| 76 |
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|
| 77 |
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{
|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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|
| 82 |
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|
| 83 |
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|
| 84 |
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|
| 85 |
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{
|
| 86 |
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|
| 87 |
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|
| 88 |
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|
| 89 |
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|
| 90 |
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|
| 91 |
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|
| 92 |
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|
| 93 |
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{
|
| 94 |
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|
| 95 |
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|
| 96 |
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|
| 97 |
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|
| 98 |
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|
| 99 |
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|
| 100 |
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|
| 101 |
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{
|
| 102 |
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|
| 103 |
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|
| 104 |
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|
| 105 |
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|
| 106 |
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|
| 107 |
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|
| 108 |
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},
|
| 109 |
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{
|
| 110 |
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|
| 111 |
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|
| 112 |
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|
| 113 |
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|
| 114 |
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|
| 115 |
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"atom2": "SG"
|
| 116 |
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},
|
| 117 |
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{
|
| 118 |
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|
| 119 |
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|
| 120 |
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|
| 121 |
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|
| 122 |
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|
| 123 |
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"atom2": "SG"
|
| 124 |
+
}
|
| 125 |
+
],
|
| 126 |
+
"name": "8wz3_D_F_A"
|
| 127 |
+
}
|
| 128 |
+
]
|
protenix_json/8wze_H_L_C.json
ADDED
|
@@ -0,0 +1,80 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "QIQLVQSGPELKKPGASVKISCKASGYTFTDYSMHWLKQAPGKGLKWMGWITTETGEPTYADDFKGRFAFSLDTSASTAYLQISSLKAEDTGVYFCARYYYGPFYWGQGTLVTVSS",
|
| 7 |
+
"count": 1,
|
| 8 |
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"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
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],
|
| 12 |
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"auth_asym_id": [
|
| 13 |
+
"H"
|
| 14 |
+
]
|
| 15 |
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}
|
| 16 |
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},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "DIQMTQSPSSLSASVGDRVTITCRSSGNIHNFLTWYQQKPGKSPQFLVYNAKTLADGVPSRFSGSGSGTQFTLTISSLQPEDFGIYYCQHFWTTPYTFGGGTKVEIK",
|
| 20 |
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"count": 1,
|
| 21 |
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"label_entity_id": "2",
|
| 22 |
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"label_asym_id": [
|
| 23 |
+
"B"
|
| 24 |
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],
|
| 25 |
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"auth_asym_id": [
|
| 26 |
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"L"
|
| 27 |
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]
|
| 28 |
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}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "TGWYTSVITIELSNIKEIKCNGTDTKVKLIKQELDKYKNAVTDLQLLMQNTPAANNRARREAPQYMNYTINTIKNLNVSISKKRKRRFLGFLLGVGSAICSGIAVCKVLHLEGEVNKIKNALLSTNKAVVSLSNGVSVLTFKVLDLKNYINNRLLPILNQQSCRIPNIETVIEFQQMNSRLLEITREFSVNAGVTTPLSTYMLTNSELLSLINDMPITNDQKKLMSSNVQIVRQQSYSIMCIIKEEVLAYVVQLPIYGV",
|
| 33 |
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"count": 1,
|
| 34 |
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|
| 35 |
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|
| 36 |
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"C"
|
| 37 |
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],
|
| 38 |
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|
| 39 |
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"C"
|
| 40 |
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]
|
| 41 |
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}
|
| 42 |
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}
|
| 43 |
+
],
|
| 44 |
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"covalent_bonds": [
|
| 45 |
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{
|
| 46 |
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|
| 47 |
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|
| 48 |
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|
| 49 |
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|
| 50 |
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|
| 51 |
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|
| 52 |
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|
| 53 |
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{
|
| 54 |
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|
| 55 |
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|
| 56 |
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|
| 57 |
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|
| 58 |
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|
| 59 |
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|
| 60 |
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|
| 61 |
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{
|
| 62 |
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"entity1": 3,
|
| 63 |
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|
| 64 |
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|
| 65 |
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|
| 66 |
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|
| 67 |
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"atom2": "SG"
|
| 68 |
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},
|
| 69 |
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{
|
| 70 |
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"entity1": 3,
|
| 71 |
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"position1": 106,
|
| 72 |
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"atom1": "SG",
|
| 73 |
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"entity2": 3,
|
| 74 |
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"position2": 241,
|
| 75 |
+
"atom2": "SG"
|
| 76 |
+
}
|
| 77 |
+
],
|
| 78 |
+
"name": "8wze_H_L_C"
|
| 79 |
+
}
|
| 80 |
+
]
|
protenix_json/8xs3_A_B_C.json
ADDED
|
@@ -0,0 +1,96 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "QVQLVQSGAEVKKPGSSVKVSCKSSGGTFSDYAINWVRQAPGQGLEWMGRILPIVGVPNYAQKFQGRVTITADKSSSTAYKEVSGLRSEDTAVYYCARRSGINGHGLDVWGQGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH",
|
| 7 |
+
"count": 1,
|
| 8 |
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|
| 9 |
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|
| 10 |
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"A"
|
| 11 |
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|
| 12 |
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"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
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]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "DIVMTQSPLSLPVTPGEPASISCRSSQSLLNTNGYNYLEWYLHKPGQSPQLLIYLGSHRASGVPDRFSGSGSGTDFTLKISRAEPEDVGVYYCMQTLQTQGYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS",
|
| 20 |
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|
| 21 |
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|
| 22 |
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|
| 23 |
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"B"
|
| 24 |
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],
|
| 25 |
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"auth_asym_id": [
|
| 26 |
+
"B"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "STCTVPTMNNAKLTSTETSFNDKQKVTFTCDSGYHSLDPNAVCETDKWKYENPCKKMCTVSDYVSELYDKPLYEVNSTMTLSCNGETKYFRCEEKNGNTSWNDTVTCPNAECQPLQLEHGSCQPVKEKYSFGEYMTINCDVGYEVIGVSYISCTANSWNVIPSCQQKCDIPSLSNGLISGSTFSIGGVIHLSCKSGFTLTGSPSSTCIDGKWNPILPTCVRSNEEFDPVDDGPDDETDLSKLSKDVVQYEQEIESLEATY",
|
| 33 |
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"count": 1,
|
| 34 |
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|
| 35 |
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"label_asym_id": [
|
| 36 |
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"C"
|
| 37 |
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],
|
| 38 |
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"auth_asym_id": [
|
| 39 |
+
"C"
|
| 40 |
+
]
|
| 41 |
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}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
+
{
|
| 46 |
+
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|
| 47 |
+
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|
| 48 |
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"atom1": "SG",
|
| 49 |
+
"entity2": 1,
|
| 50 |
+
"position2": 96,
|
| 51 |
+
"atom2": "SG"
|
| 52 |
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},
|
| 53 |
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{
|
| 54 |
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"entity1": 2,
|
| 55 |
+
"position1": 23,
|
| 56 |
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"atom1": "SG",
|
| 57 |
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"entity2": 2,
|
| 58 |
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"position2": 93,
|
| 59 |
+
"atom2": "SG"
|
| 60 |
+
},
|
| 61 |
+
{
|
| 62 |
+
"entity1": 2,
|
| 63 |
+
"position1": 140,
|
| 64 |
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"atom1": "SG",
|
| 65 |
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"entity2": 2,
|
| 66 |
+
"position2": 200,
|
| 67 |
+
"atom2": "SG"
|
| 68 |
+
},
|
| 69 |
+
{
|
| 70 |
+
"entity1": 3,
|
| 71 |
+
"position1": 3,
|
| 72 |
+
"atom1": "SG",
|
| 73 |
+
"entity2": 3,
|
| 74 |
+
"position2": 43,
|
| 75 |
+
"atom2": "SG"
|
| 76 |
+
},
|
| 77 |
+
{
|
| 78 |
+
"entity1": 3,
|
| 79 |
+
"position1": 58,
|
| 80 |
+
"atom1": "SG",
|
| 81 |
+
"entity2": 3,
|
| 82 |
+
"position2": 92,
|
| 83 |
+
"atom2": "SG"
|
| 84 |
+
},
|
| 85 |
+
{
|
| 86 |
+
"entity1": 3,
|
| 87 |
+
"position1": 83,
|
| 88 |
+
"atom1": "SG",
|
| 89 |
+
"entity2": 3,
|
| 90 |
+
"position2": 107,
|
| 91 |
+
"atom2": "SG"
|
| 92 |
+
}
|
| 93 |
+
],
|
| 94 |
+
"name": "8xs3_A_B_C"
|
| 95 |
+
}
|
| 96 |
+
]
|
protenix_json/8y0r_H_L_2.json
ADDED
|
@@ -0,0 +1,72 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "DKKTEETTLLEDRILTTRNGHTTSTTQSSVGVTYGYSTGEDHVSGPNTSGLETRVVQAERFFKKHLFDWTTDKPFGHIEKLELPTDHKGVYGQLVDSFAYMRNGWDVEVSAVGNQFNGGCLLVAMVPEFKEFTTREKYQLTLFPHQFISPRTNMTAHITVPYLGVNRYDQYNKHKPWTLVVMVVSPLTTSSIGASQIKVYTNIAPTHVHVAGELPSKE",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "2",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"B"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"2"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "EEKVVESGGGLVQPGGSLRLSCVGSGFNFKNYEINWVRQAPGKALEWLAYITQTSDFIYYADSVKGRFTISRDNSRNTAYLQMNNLRTEDTARYFCTRAGLTGCKSRHCMYVWGPGAEVVVSS",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "5",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"E"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"H"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "QTVIQEPAMSVSLGGTVTLTCGFISGSVTGTNYPSWFQQTPGQPPRLLIYYANSRPTEVPSRFSGAISGNKAALTITGAQAEDEADYFCCLYKTNNNILFGGGTHLTVL",
|
| 33 |
+
"count": 1,
|
| 34 |
+
"label_entity_id": "6",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"F"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"L"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
+
{
|
| 46 |
+
"entity1": 2,
|
| 47 |
+
"position1": 22,
|
| 48 |
+
"atom1": "SG",
|
| 49 |
+
"entity2": 2,
|
| 50 |
+
"position2": 96,
|
| 51 |
+
"atom2": "SG"
|
| 52 |
+
},
|
| 53 |
+
{
|
| 54 |
+
"entity1": 2,
|
| 55 |
+
"position1": 104,
|
| 56 |
+
"atom1": "SG",
|
| 57 |
+
"entity2": 2,
|
| 58 |
+
"position2": 109,
|
| 59 |
+
"atom2": "SG"
|
| 60 |
+
},
|
| 61 |
+
{
|
| 62 |
+
"entity1": 3,
|
| 63 |
+
"position1": 21,
|
| 64 |
+
"atom1": "SG",
|
| 65 |
+
"entity2": 3,
|
| 66 |
+
"position2": 89,
|
| 67 |
+
"atom2": "SG"
|
| 68 |
+
}
|
| 69 |
+
],
|
| 70 |
+
"name": "8y0r_H_L_2"
|
| 71 |
+
}
|
| 72 |
+
]
|
protenix_json/8yww_E_D_A.json
ADDED
|
@@ -0,0 +1,184 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "MFVFLVLLPLVSSQCVNLITRTQLPPAYTNSFTRGVYYPDKVFRSSVLHSTQDLFLPFFSNVTWFHAIHVSGTNGTKHVDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVCEFQFCNDPFLDVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTPINLGRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFDEVFNATRFASVYAWNRKRISNCVADYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGVNCYFPLQSYGFRPTYGVGHQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNSSYECDIPIGAGICASYQTQTKSHGSASSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPDPSKPSKRSPIEDLLFNKVTLADAGFIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGPALQIPFPMQMAYRFNGIGVTQNVLYENQKLIANQFNSAIGKIQDSLSSTPSALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDILSRLDPPEAEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTYVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPELDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQGS",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"A"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "EVQLVESGGDLVQPGGSLRLSCAASGFIVSRNYMSWVRQAPGKGLEWVSSIYSGGSTFYAGSVKGRFTISRDNSKNTLYLQMNSLRAEDTAIYYCARDIPRHGGDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK",
|
| 20 |
+
"count": 1,
|
| 21 |
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"label_entity_id": "2",
|
| 22 |
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"label_asym_id": [
|
| 23 |
+
"D"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"E"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "IRMTQSPASLSASIGDRVTITCQASQDINKYLNWYQQKPGKAPRLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDNLPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE",
|
| 33 |
+
"count": 1,
|
| 34 |
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"label_entity_id": "3",
|
| 35 |
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"label_asym_id": [
|
| 36 |
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"E"
|
| 37 |
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],
|
| 38 |
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"auth_asym_id": [
|
| 39 |
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"D"
|
| 40 |
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]
|
| 41 |
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}
|
| 42 |
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}
|
| 43 |
+
],
|
| 44 |
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"covalent_bonds": [
|
| 45 |
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{
|
| 46 |
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"entity1": 1,
|
| 47 |
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"position1": 131,
|
| 48 |
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"atom1": "SG",
|
| 49 |
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"entity2": 1,
|
| 50 |
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"position2": 166,
|
| 51 |
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"atom2": "SG"
|
| 52 |
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},
|
| 53 |
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|
| 54 |
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| 55 |
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| 56 |
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| 57 |
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| 58 |
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| 59 |
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| 60 |
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| 61 |
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| 62 |
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| 63 |
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|
| 64 |
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| 65 |
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| 66 |
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| 67 |
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|
| 68 |
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| 69 |
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|
| 70 |
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|
| 71 |
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|
| 72 |
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|
| 73 |
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|
| 74 |
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|
| 75 |
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|
| 76 |
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| 77 |
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|
| 78 |
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|
| 79 |
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|
| 80 |
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|
| 81 |
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| 82 |
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| 83 |
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| 84 |
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| 85 |
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| 86 |
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| 87 |
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| 88 |
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| 89 |
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| 90 |
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| 91 |
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| 92 |
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| 93 |
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| 94 |
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| 95 |
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| 98 |
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|
| 100 |
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| 101 |
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| 102 |
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| 103 |
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| 107 |
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| 108 |
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| 109 |
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| 110 |
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| 111 |
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| 112 |
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| 114 |
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| 115 |
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| 116 |
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| 117 |
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| 118 |
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| 121 |
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| 122 |
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| 123 |
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|
| 124 |
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| 125 |
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| 126 |
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|
| 127 |
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|
| 128 |
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|
| 129 |
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|
| 130 |
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|
| 131 |
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|
| 132 |
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|
| 133 |
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{
|
| 134 |
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|
| 135 |
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|
| 136 |
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|
| 137 |
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|
| 138 |
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|
| 139 |
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|
| 140 |
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|
| 141 |
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{
|
| 142 |
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|
| 143 |
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|
| 144 |
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|
| 145 |
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|
| 146 |
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|
| 147 |
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|
| 148 |
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|
| 149 |
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|
| 150 |
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|
| 151 |
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|
| 152 |
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|
| 153 |
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|
| 154 |
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|
| 155 |
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|
| 156 |
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|
| 157 |
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{
|
| 158 |
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|
| 159 |
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|
| 160 |
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|
| 161 |
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|
| 162 |
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|
| 163 |
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|
| 164 |
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|
| 165 |
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{
|
| 166 |
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|
| 167 |
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|
| 168 |
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|
| 169 |
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|
| 170 |
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|
| 171 |
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|
| 172 |
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|
| 173 |
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{
|
| 174 |
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|
| 175 |
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|
| 176 |
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|
| 177 |
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|
| 178 |
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|
| 179 |
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|
| 180 |
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}
|
| 181 |
+
],
|
| 182 |
+
"name": "8yww_E_D_A"
|
| 183 |
+
}
|
| 184 |
+
]
|
protenix_json/8yz5_G_K_D.json
ADDED
|
@@ -0,0 +1,160 @@
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|
|
|
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|
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|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
|
|
|
|
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|
|
|
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|
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|
|
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|
|
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|
|
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|
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|
|
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|
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|
|
|
|
|
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|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
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|
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|
|
|
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|
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|
|
|
|
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|
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|
|
|
|
|
|
|
|
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|
|
|
|
|
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|
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|
|
|
|
|
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|
|
|
|
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|
|
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|
|
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|
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|
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|
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|
|
|
|
|
|
|
|
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|
|
| 1 |
+
[
|
| 2 |
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{
|
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|
| 4 |
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|
| 5 |
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|
| 6 |
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| 17 |
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{
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| 18 |
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|
| 19 |
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| 32 |
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| 44 |
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|
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|
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|
| 125 |
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|
| 126 |
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|
| 127 |
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|
| 128 |
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|
| 129 |
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|
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|
| 131 |
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|
| 132 |
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|
| 133 |
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{
|
| 134 |
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|
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|
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|
| 137 |
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|
| 138 |
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|
| 139 |
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|
| 140 |
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|
| 141 |
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{
|
| 142 |
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|
| 143 |
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|
| 144 |
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|
| 145 |
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|
| 146 |
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|
| 147 |
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|
| 148 |
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|
| 149 |
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{
|
| 150 |
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|
| 151 |
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|
| 152 |
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|
| 153 |
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|
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|
| 155 |
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|
| 156 |
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}
|
| 157 |
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],
|
| 158 |
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"name": "8yz5_G_K_D"
|
| 159 |
+
}
|
| 160 |
+
]
|
protenix_json/9axl_H_L_B.json
ADDED
|
@@ -0,0 +1,176 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
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|
|
|
|
|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
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|
|
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|
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|
|
|
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "MRARPRPRPLWATVLALGALAGVGVGGPNICTTRGVSSCQQCLAVSPMCAWCSDEALPLGSPRCDLKENLLKDNCAPESIEFPVSEARVLEDRPLSDKGSGDSSQVTQVSPQRIALRLRPDDSKNFSIQVRQVEDYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYMYISPPEALENPCYDMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIALDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINLIFAVTENVVNLYQNYSELIPGTTVGVLSMDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNATCLNNEVIPGLKSCMGLKIGDTVSFSIEAKVRGCPQEKEKSFTIKPVGFKDSLIVQVTFDCDCACQAQAEPNSHRCNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTCNRYCRDEIESVKELKDTGKDAVNCTYKNEDDCVVRFQYYEDSSGKSILYVVEEPECPKGPDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTANNPLYKEATSTFTNITYRGT",
|
| 7 |
+
"count": 1,
|
| 8 |
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"label_entity_id": "2",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"B"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"B"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "EVQLQESGAELAKPGASVKMSCKASGYTFTDYWMHWVKQRPGQGLEWIGYINPSTGYTEYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCARWRGVYRSDVHYYAMDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSAAPSQSITCNVAHPASSTKVDKKIEPRGP",
|
| 20 |
+
"count": 1,
|
| 21 |
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"label_entity_id": "3",
|
| 22 |
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"label_asym_id": [
|
| 23 |
+
"C"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"H"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "QIVLTQSPAIMSASPGEKVTMTCSASSSVSYMHWYQQKSGTSPKRWIYDTSKLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSKPPTFGAGTKLELKWADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC",
|
| 33 |
+
"count": 1,
|
| 34 |
+
"label_entity_id": "4",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"D"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"L"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
+
{
|
| 46 |
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"entity1": 1,
|
| 47 |
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"position1": 39,
|
| 48 |
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"atom1": "SG",
|
| 49 |
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|
| 50 |
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"position2": 461,
|
| 51 |
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"atom2": "SG"
|
| 52 |
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},
|
| 53 |
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{
|
| 54 |
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"entity1": 1,
|
| 55 |
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"position1": 42,
|
| 56 |
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|
| 57 |
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"entity2": 1,
|
| 58 |
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"position2": 64,
|
| 59 |
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"atom2": "SG"
|
| 60 |
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},
|
| 61 |
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{
|
| 62 |
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"entity1": 1,
|
| 63 |
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"position1": 52,
|
| 64 |
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"atom1": "SG",
|
| 65 |
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"entity2": 1,
|
| 66 |
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"position2": 75,
|
| 67 |
+
"atom2": "SG"
|
| 68 |
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},
|
| 69 |
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{
|
| 70 |
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"entity1": 1,
|
| 71 |
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"position1": 203,
|
| 72 |
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"atom1": "SG",
|
| 73 |
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"entity2": 1,
|
| 74 |
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"position2": 210,
|
| 75 |
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"atom2": "SG"
|
| 76 |
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},
|
| 77 |
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{
|
| 78 |
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"entity1": 1,
|
| 79 |
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|
| 80 |
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"atom1": "SG",
|
| 81 |
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|
| 82 |
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"position2": 299,
|
| 83 |
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"atom2": "SG"
|
| 84 |
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},
|
| 85 |
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{
|
| 86 |
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"entity1": 1,
|
| 87 |
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"position1": 400,
|
| 88 |
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|
| 89 |
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"entity2": 1,
|
| 90 |
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"position2": 412,
|
| 91 |
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"atom2": "SG"
|
| 92 |
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},
|
| 93 |
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{
|
| 94 |
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"entity1": 1,
|
| 95 |
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"position1": 463,
|
| 96 |
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"atom1": "SG",
|
| 97 |
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|
| 98 |
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"position2": 483,
|
| 99 |
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"atom2": "SG"
|
| 100 |
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},
|
| 101 |
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{
|
| 102 |
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"entity1": 1,
|
| 103 |
+
"position1": 474,
|
| 104 |
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"atom1": "SG",
|
| 105 |
+
"entity2": 1,
|
| 106 |
+
"position2": 486,
|
| 107 |
+
"atom2": "SG"
|
| 108 |
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},
|
| 109 |
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{
|
| 110 |
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"entity1": 1,
|
| 111 |
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|
| 112 |
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"atom1": "SG",
|
| 113 |
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"entity2": 1,
|
| 114 |
+
"position2": 497,
|
| 115 |
+
"atom2": "SG"
|
| 116 |
+
},
|
| 117 |
+
{
|
| 118 |
+
"entity1": 1,
|
| 119 |
+
"position1": 499,
|
| 120 |
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"atom1": "SG",
|
| 121 |
+
"entity2": 1,
|
| 122 |
+
"position2": 529,
|
| 123 |
+
"atom2": "SG"
|
| 124 |
+
},
|
| 125 |
+
{
|
| 126 |
+
"entity1": 1,
|
| 127 |
+
"position1": 534,
|
| 128 |
+
"atom1": "SG",
|
| 129 |
+
"entity2": 1,
|
| 130 |
+
"position2": 547,
|
| 131 |
+
"atom2": "SG"
|
| 132 |
+
},
|
| 133 |
+
{
|
| 134 |
+
"entity1": 2,
|
| 135 |
+
"position1": 22,
|
| 136 |
+
"atom1": "SG",
|
| 137 |
+
"entity2": 2,
|
| 138 |
+
"position2": 96,
|
| 139 |
+
"atom2": "SG"
|
| 140 |
+
},
|
| 141 |
+
{
|
| 142 |
+
"entity1": 2,
|
| 143 |
+
"position1": 140,
|
| 144 |
+
"atom1": "SG",
|
| 145 |
+
"entity2": 3,
|
| 146 |
+
"position2": 213,
|
| 147 |
+
"atom2": "SG"
|
| 148 |
+
},
|
| 149 |
+
{
|
| 150 |
+
"entity1": 2,
|
| 151 |
+
"position1": 152,
|
| 152 |
+
"atom1": "SG",
|
| 153 |
+
"entity2": 2,
|
| 154 |
+
"position2": 207,
|
| 155 |
+
"atom2": "SG"
|
| 156 |
+
},
|
| 157 |
+
{
|
| 158 |
+
"entity1": 3,
|
| 159 |
+
"position1": 23,
|
| 160 |
+
"atom1": "SG",
|
| 161 |
+
"entity2": 3,
|
| 162 |
+
"position2": 87,
|
| 163 |
+
"atom2": "SG"
|
| 164 |
+
},
|
| 165 |
+
{
|
| 166 |
+
"entity1": 3,
|
| 167 |
+
"position1": 133,
|
| 168 |
+
"atom1": "SG",
|
| 169 |
+
"entity2": 3,
|
| 170 |
+
"position2": 193,
|
| 171 |
+
"atom2": "SG"
|
| 172 |
+
}
|
| 173 |
+
],
|
| 174 |
+
"name": "9axl_H_L_B"
|
| 175 |
+
}
|
| 176 |
+
]
|
protenix_json/9ctu_D_C_A.json
ADDED
|
@@ -0,0 +1,80 @@
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 1 |
+
[
|
| 2 |
+
{
|
| 3 |
+
"sequences": [
|
| 4 |
+
{
|
| 5 |
+
"proteinChain": {
|
| 6 |
+
"sequence": "MVLQTQVFISLLLWISGAYGDIVMTQSPASLAVSLGQRATISCKASQSIDYDGDNYMNWYQQKPGQPPKLLIYTTSNLESGIPARFSGSGSGTDFTLNIHPVEEGDAATYYCQQNNEDPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC",
|
| 7 |
+
"count": 1,
|
| 8 |
+
"label_entity_id": "1",
|
| 9 |
+
"label_asym_id": [
|
| 10 |
+
"A"
|
| 11 |
+
],
|
| 12 |
+
"auth_asym_id": [
|
| 13 |
+
"C"
|
| 14 |
+
]
|
| 15 |
+
}
|
| 16 |
+
},
|
| 17 |
+
{
|
| 18 |
+
"proteinChain": {
|
| 19 |
+
"sequence": "MKHLWFFLLLVAAPRWVLSEVQLQQSGPELVKPGASMKISCKTSGYSFTGYTMNWVKQSHGKNLEWIGLINPYNGDTSYNQKFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCEVINTYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSHHHHHHH",
|
| 20 |
+
"count": 1,
|
| 21 |
+
"label_entity_id": "2",
|
| 22 |
+
"label_asym_id": [
|
| 23 |
+
"B"
|
| 24 |
+
],
|
| 25 |
+
"auth_asym_id": [
|
| 26 |
+
"D"
|
| 27 |
+
]
|
| 28 |
+
}
|
| 29 |
+
},
|
| 30 |
+
{
|
| 31 |
+
"proteinChain": {
|
| 32 |
+
"sequence": "MADSNGTITVEELKKLLEQWNLVIGFLFLTWICLLQFAYANRNRFLYIIKLIFLWLLWPVTLACFVLAAVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHGTILTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRYRIGNYKLNTDHSSSSDNIALLVQSNSLEVLFQ",
|
| 33 |
+
"count": 1,
|
| 34 |
+
"label_entity_id": "3",
|
| 35 |
+
"label_asym_id": [
|
| 36 |
+
"E"
|
| 37 |
+
],
|
| 38 |
+
"auth_asym_id": [
|
| 39 |
+
"A"
|
| 40 |
+
]
|
| 41 |
+
}
|
| 42 |
+
}
|
| 43 |
+
],
|
| 44 |
+
"covalent_bonds": [
|
| 45 |
+
{
|
| 46 |
+
"entity1": 1,
|
| 47 |
+
"position1": 43,
|
| 48 |
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"atom1": "SG",
|
| 49 |
+
"entity2": 1,
|
| 50 |
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"position2": 112,
|
| 51 |
+
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|
| 52 |
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},
|
| 53 |
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{
|
| 54 |
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"entity1": 1,
|
| 55 |
+
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|
| 56 |
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|
| 57 |
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"entity2": 1,
|
| 58 |
+
"position2": 218,
|
| 59 |
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"atom2": "SG"
|
| 60 |
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},
|
| 61 |
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{
|
| 62 |
+
"entity1": 2,
|
| 63 |
+
"position1": 41,
|
| 64 |
+
"atom1": "SG",
|
| 65 |
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"entity2": 2,
|
| 66 |
+
"position2": 115,
|
| 67 |
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"atom2": "SG"
|
| 68 |
+
},
|
| 69 |
+
{
|
| 70 |
+
"entity1": 2,
|
| 71 |
+
"position1": 159,
|
| 72 |
+
"atom1": "SG",
|
| 73 |
+
"entity2": 2,
|
| 74 |
+
"position2": 214,
|
| 75 |
+
"atom2": "SG"
|
| 76 |
+
}
|
| 77 |
+
],
|
| 78 |
+
"name": "9ctu_D_C_A"
|
| 79 |
+
}
|
| 80 |
+
]
|