kernel_id
int64
24.2k
23.3M
prompt
stringlengths
8
1.85M
completetion
stringlengths
1
182k
comp_name
stringlengths
5
57
9,725,565
learn = Learner(data, md_ef, metrics = [qk], model_dir="models" ).to_fp16() learn.data.add_test(ImageList.from_df(test_df, '.. /input/aptos2019-blindness-detection', folder='test_images', suffix='.png'))<load_pretrained>
svc = SVC() svc.fit(X_train, Y_train) Y_pred = svc.predict(X_test) acc_svc = round(svc.score(X_train, Y_train)* 100, 2) acc_svc
Titanic - Machine Learning from Disaster
9,725,565
learn.load('abcdef');<compute_test_metric>
knn = KNeighborsClassifier(n_neighbors = 3) knn.fit(X_train, Y_train) Y_pred = knn.predict(X_test) acc_knn = round(knn.score(X_train, Y_train)* 100, 2) acc_knn
Titanic - Machine Learning from Disaster
9,725,565
class OptimizedRounder(object): def __init__(self): self.coef_ = 0 def _kappa_loss(self, coef, X, y): X_p = np.copy(X) for i, pred in enumerate(X_p): if pred < coef[0]: X_p[i] = 0 elif pred >= coef[0] and pred < coef[1]: X_p[i] = 1 elif pred >= coef[1] and pred < coef[2]: X_p[i] = 2 elif pred >= coef[2] and pred < coe...
gaussian = GaussianNB() gaussian.fit(X_train, Y_train) Y_pred = gaussian.predict(X_test) acc_gaussian = round(gaussian.score(X_train, Y_train)* 100, 2) acc_gaussian
Titanic - Machine Learning from Disaster
9,725,565
def run_subm(learn=learn, coefficients=[0.5, 1.5, 2.5, 3.5]): opt = OptimizedRounder() preds,y = learn.get_preds(DatasetType.Test) tst_pred = opt.predict(preds, coefficients) test_df.diagnosis = tst_pred.astype(int) test_df.to_csv('submission.csv',index=False) print('done' )<define_variables>
perceptron = Perceptron() perceptron.fit(X_train, Y_train) Y_pred = perceptron.predict(X_test) acc_perceptron = round(perceptron.score(X_train, Y_train)* 100, 2) acc_perceptron
Titanic - Machine Learning from Disaster
9,725,565
TTA = False<set_options>
linear_svc = LinearSVC() linear_svc.fit(X_train, Y_train) Y_pred = linear_svc.predict(X_test) acc_linear_svc = round(linear_svc.score(X_train, Y_train)* 100, 2) acc_linear_svc
Titanic - Machine Learning from Disaster
9,725,565
%reload_ext autoreload %autoreload 2 %matplotlib inline %matplotlib inline <set_options>
sgd = SGDClassifier() sgd.fit(X_train, Y_train) Y_pred = sgd.predict(X_test) acc_sgd = round(sgd.score(X_train, Y_train)* 100, 2) acc_sgd
Titanic - Machine Learning from Disaster
9,725,565
def seed_everything(seed): random.seed(seed) os.environ['PYTHONHASHSEED'] = str(seed) np.random.seed(seed) torch.manual_seed(seed) torch.cuda.manual_seed(seed) torch.backends.cudnn.deterministic = True seed_everything(42 )<load_from_csv>
decision_tree = DecisionTreeClassifier() decision_tree.fit(X_train, Y_train) Y_pred = decision_tree.predict(X_test) acc_decision_tree = round(decision_tree.score(X_train, Y_train)* 100, 2) acc_decision_tree
Titanic - Machine Learning from Disaster
9,725,565
def get_df() : base_image_dir = os.path.join('.. ', 'input/aptos2019-blindness-detection/') train_dir = os.path.join(base_image_dir,'train_images/') df = pd.read_csv(os.path.join(base_image_dir, 'train.csv')) df['path'] = df['id_code'].map(lambda x: os.path.join(train_dir,'{}.png'.format(x))) df = df.drop(columns=['...
random_forest = RandomForestClassifier(n_estimators=100) random_forest.fit(X_train, Y_train) Y_pred = random_forest.predict(X_test) random_forest.score(X_train, Y_train) acc_random_forest = round(random_forest.score(X_train, Y_train)* 100, 2) acc_random_forest
Titanic - Machine Learning from Disaster
9,725,565
def qk(y_pred, y): return torch.tensor(cohen_kappa_score(torch.round(y_pred), y, weights='quadratic'), device='cuda:0' )<compute_test_metric>
models = pd.DataFrame({ 'Model': ['Support Vector Machines', 'KNN', 'Logistic Regression', 'Random Forest', 'Naive Bayes', 'Perceptron', 'Stochastic Gradient Decent', 'Linear SVC', 'Decision Tree'], 'Score': [acc_svc, acc_knn, acc_log, acc_random_forest, acc_gaussian, acc_perceptron, acc_sgd, acc_linear_svc, acc_decisi...
Titanic - Machine Learning from Disaster
9,725,565
<save_to_csv><EOS>
submission = pd.DataFrame({ "PassengerId": test_df["PassengerId"], "Survived": Y_pred }) submission.to_csv('submission2.csv', index=False )
Titanic - Machine Learning from Disaster
8,325,212
<SOS> metric: categorizationaccuracy Kaggle data source: titanic-machine-learning-from-disaster<choose_model_class>
%matplotlib inline
Titanic - Machine Learning from Disaster
8,325,212
md_ef = EfficientNet.from_pretrained('efficientnet-b5', num_classes=1) learn = Learner(data, md_ef, metrics = [qk], callback_fns=[ BnFreeze, partial(SaveModelCallback, monitor='quad_kappa', name='bestmodel') ], model_dir="models", ) if TTA: learn = learn.to_fp32() else: learn = learn.to_fp16() learn.data.add_test(I...
df = pd.read_csv(".. /input/titanic/train.csv") df.head()
Titanic - Machine Learning from Disaster
8,325,212
!mkdir models !cp '.. /input/kaggle-public/abcdef.pth' 'models' learn.load('abcdef');<load_pretrained>
df.drop(['PassengerId','Cabin','Name','Ticket'],axis=1,inplace=True) df.head()
Titanic - Machine Learning from Disaster
8,325,212
learn.load('bestmodel' )<train_on_grid>
df.isnull().sum()
Titanic - Machine Learning from Disaster
8,325,212
rounder = OptimizedRounder() rounder.fit(valid_preds[0], valid_preds[1]) rounder_coefficients = rounder.coefficients() print(rounder_coefficients )<count_values>
df = df[df["Embarked"].notna() ] df.isnull().sum()
Titanic - Machine Learning from Disaster
8,325,212
test_df_tta['diagnosis'].value_counts()<import_modules>
df["Age"] = df[["Age","Pclass"]].apply(find_age,axis=1) df.head()
Titanic - Machine Learning from Disaster
8,325,212
import os import sys import cv2 import time import scipy as sp import numpy as np import pandas as pd from tqdm import tqdm from PIL import Image from functools import partial import matplotlib.pyplot as plt import tensorflow as tf from tensorflow import set_random_seed import keras from keras import initializers from ...
df.isnull().sum()
Titanic - Machine Learning from Disaster
8,325,212
SEED = 7 np.random.seed(SEED) set_random_seed(SEED) INPUT_PATH = '.. /input/aptos2019-blindness-detection/' DIM = 224 BATCH_SIZE = 4 CHANNEL_SIZE = 3 NUM_EPOCHS = 30 LR = 1e-3 CLASS= {0: "No DR", 1: "Mild", 2: "Moderate", 3: "Severe", 4: "Proliferative DR"} NUM_CLASSES = len(CLASS.keys()) SAVED_MODEL_NAME = 'model.h...
df["Embarked"].value_counts()
Titanic - Machine Learning from Disaster
8,325,212
train = pd.read_csv(INPUT_PATH + 'train.csv') test = pd.read_csv(INPUT_PATH + 'test.csv' )<feature_engineering>
le = LabelEncoder() le.fit(["S","C","Q"]) df["Embarked"] = le.fit_transform(df["Embarked"] )
Titanic - Machine Learning from Disaster
8,325,212
train['images'] = train['id_code'].apply(lambda x: INPUT_PATH + "train_images/" + str(x)+ ".png") test['images'] = test['id_code'].apply(lambda x: INPUT_PATH + "test_images/" + str(x)+ ".png") train.drop(['id_code'],axis = 1, inplace =True) train = train[['images','diagnosis']]<predict_on_test>
from sklearn.preprocessing import StandardScaler
Titanic - Machine Learning from Disaster
8,325,212
def get_preds_and_labels(model, generator): preds = [] labels = [] for _ in range(int(np.ceil(generator.samples / BATCH_SIZE))): x, y = next(generator) preds.append(model.predict(x)) labels.append(y) return np.concatenate(preds ).ravel() , np.concatenate(labels ).ravel()<train_model>
scaler = StandardScaler()
Titanic - Machine Learning from Disaster
8,325,212
class Metrics(Callback): def on_train_begin(self, logs={}): self.val_kappas = [] def on_epoch_end(self, epoch, logs={}): y_pred, labels = get_preds_and_labels(model, val_generator) y_pred = np.rint(y_pred ).astype(np.uint8 ).clip(0, 4) _val_kappa = cohen_kappa_score(labels, y_pred, weights='quadratic') self.va...
s = scaler.fit(df[["Fare"]] )
Titanic - Machine Learning from Disaster
8,325,212
train_datagen = ImageDataGenerator(rotation_range=360, horizontal_flip=True, vertical_flip=True, validation_split=0.15, preprocessing_function=preprocess_image, rescale=1 / 128.) train_generator = train_datagen.flow_from_dataframe(train, x_col='images', y_col='diagnosis', target_size=(DIM, DIM), batch_size=BATCH_SIZE, ...
df["Fare"] = s.transform(df[["Fare"]]) df.head()
Titanic - Machine Learning from Disaster
8,325,212
class RAdam(keras.optimizers.Optimizer): def __init__(self, lr=0.001, beta_1=0.9, beta_2=0.999, epsilon=None, decay=0., weight_decay=0., amsgrad=False, total_steps=0, warmup_proportion=0.1, min_lr=0., **kwargs): super(RAdam, self ).__init__(**kwargs) with K.name_scope(self.__class__.__name__): self.iterations = K.va...
df["Male"] = pd.get_dummies(df["Sex"],drop_first=True )
Titanic - Machine Learning from Disaster
8,325,212
class GroupNormalization(Layer): def __init__(self, groups=32, axis=-1, epsilon=1e-5, center=True, scale=True, beta_initializer='zeros', gamma_initializer='ones', beta_regularizer=None, gamma_regularizer=None, beta_constraint=None, gamma_constraint=None, **kwargs): super(GroupNormalization, self ).__init__(**kwargs) ...
df.drop("Sex",inplace=True,axis=1 )
Titanic - Machine Learning from Disaster
8,325,212
resnet = ResNet50(weights=None, include_top=False, input_shape=(DIM, DIM, CHANNEL_SIZE)) resnet.load_weights('.. /input/resnet50-weights-file/resnet50_weights_tf_dim_ordering_tf_kernels_notop.h5' )<choose_model_class>
x = df[['Male','Agegroup','SibSp','Pclass', 'Parch', 'Fare', 'Embarked']].values y = df["Survived"].values
Titanic - Machine Learning from Disaster
8,325,212
for i, layer in enumerate(resnet.layers): if "batch_normalization" in layer.name: effnet.layers[i] = GroupNormalization(groups=32, axis=-1, epsilon=0.00001 )<choose_model_class>
from sklearn.model_selection import train_test_split
Titanic - Machine Learning from Disaster
8,325,212
def build_model() : model = Sequential() model.add(resnet) model.add(GlobalAveragePooling2D()) model.add(Dropout(0.5)) model.add(Dense(5, activation=elu)) model.add(Dense(1, activation="linear")) model.compile(loss='mse', optimizer=RAdam(lr=0.00005), metrics=['mse', 'acc']) print(model.summary()) return model mod...
from sklearn.model_selection import train_test_split
Titanic - Machine Learning from Disaster
8,325,212
kappa_metrics = Metrics() es = EarlyStopping(monitor='val_loss', mode='auto', verbose=1, patience=12) rlr = ReduceLROnPlateau(monitor='val_loss', factor=0.5, patience=4, verbose=1, mode='auto', epsilon=0.0001) with tf.device('/gpu:0'): history = model.fit_generator(train_generator, steps_per_epoch=train_generator.sam...
x_train,x_test,y_train,y_test = train_test_split(x,y,test_size=0.35 )
Titanic - Machine Learning from Disaster
8,325,212
model.load_weights(SAVED_MODEL_NAME )<compute_test_metric>
from sklearn.tree import DecisionTreeClassifier
Titanic - Machine Learning from Disaster
8,325,212
y_train_preds, train_labels = get_preds_and_labels(model, train_generator) y_train_preds = np.rint(y_train_preds ).astype(np.uint8 ).clip(0, 4) train_score = cohen_kappa_score(train_labels, y_train_preds, weights="quadratic") y_val_preds, val_labels = get_preds_and_labels(model, val_generator) y_val_preds = np.rint...
tree = DecisionTreeClassifier(max_depth=4,random_state=10 )
Titanic - Machine Learning from Disaster
8,325,212
print(f"The Training Cohen Kappa Score is: {round(train_score, 5)}") print(f"The Validation Cohen Kappa Score is: {round(val_score, 5)}" )<compute_train_metric>
tree.fit(x_train,y_train )
Titanic - Machine Learning from Disaster
8,325,212
class OptimizedRounder(object): def __init__(self): self.coef_ = 0 def _kappa_loss(self, coef, X, y): X_p = np.copy(X) for i, pred in enumerate(X_p): if pred < coef[0]: X_p[i] = 0 elif pred >= coef[0] and pred < coef[1]: X_p[i] = 1 elif pred >= coef[1] and pred < coef[2]: X_p[i] = 2 elif pred >= coef[2] and pred <...
predict = tree.predict(x_test )
Titanic - Machine Learning from Disaster
8,325,212
y_val_preds, val_labels = get_preds_and_labels(model, val_generator) optR = OptimizedRounder() optR.fit(y_val_preds, val_labels) coefficients = optR.coefficients() opt_val_predictions = optR.predict(y_val_preds, coefficients) new_val_score = cohen_kappa_score(val_labels, opt_val_predictions, weights="quadratic" )<co...
from sklearn.metrics import accuracy_score
Titanic - Machine Learning from Disaster
8,325,212
print(f"Optimized Thresholds: {coefficients} ") print(f"The Validation Quadratic Weighted Kappa(QWK) \ with optimized rounding thresholds is: {round(new_val_score, 5)} ") print(f"This is an improvement of {round(new_val_score - val_score, 5)} \ over the unoptimized rounding" )<feature_engineering>
accuracy_score(y_test,predict )
Titanic - Machine Learning from Disaster
8,325,212
test['diagnosis'] = np.zeros(test.shape[0]) test_generator = ImageDataGenerator(preprocessing_function=preprocess_image, rescale=1 / 128.).flow_from_dataframe(test, x_col='images', y_col='diagnosis', target_size=(DIM, DIM), batch_size=BATCH_SIZE, class_mode= 'other', shuffle=False )<save_to_csv>
test = pd.read_csv(".. /input/titanic/test.csv") test.head()
Titanic - Machine Learning from Disaster
8,325,212
y_test,_ = get_preds_and_labels(model, test_generator) y_test = optR.predict(y_test, coefficients ).astype(np.uint8) test['diagnosis'] = y_test test['id_code'] = test['id_code'] test.drop(['images'], axis = 1, inplace = True) test.to_csv('submission.csv', index=False )<import_modules>
test.drop(['Cabin','Name','Ticket'],axis=1,inplace=True )
Titanic - Machine Learning from Disaster
8,325,212
import cv2 import matplotlib.pyplot as plt from os.path import isfile import torch.nn.init as init import torch import torch.nn as nn from PIL import Image, ImageFilter from sklearn.model_selection import train_test_split, StratifiedKFold from torch.utils.data import Dataset from torchvision import transforms from torc...
test.isnull().sum()
Titanic - Machine Learning from Disaster
8,325,212
package_path = '.. /input/efficientnet/efficientnet-pytorch/EfficientNet-PyTorch/' sys.path.append(package_path) def seed_everything(seed): random.seed(seed) os.environ['PYTHONHASHSEED'] = str(seed) np.random.seed(seed) torch.manual_seed(seed) torch.cuda.manual_seed(seed) torch.backends.cudnn.deterministic = True...
test.isnull().sum()
Titanic - Machine Learning from Disaster
8,325,212
package_dir = ".. /input/pretrained-models/pretrained-models/pretrained-models.pytorch-master/" sys.path.insert(0, package_dir) device = torch.device("cuda:0") ImageFile.LOAD_TRUNCATED_IMAGES = True<load_from_csv>
test["Age"] = test[["Age","Pclass"]].apply(find_age,axis=1) df.head()
Titanic - Machine Learning from Disaster
8,325,212
class RetinopathyDatasetTest(Dataset): def __init__(self, csv_file, transform): self.data = pd.read_csv(csv_file) self.transform = transform def __len__(self): return len(self.data) def __getitem__(self, idx): img_name = os.path.join('.. /input/aptos2019-blindness-detection/test_images', self.data.loc[idx, 'id_code']...
test = test.fillna(df.mean()) test.isnull().sum()
Titanic - Machine Learning from Disaster
8,325,212
BatchNormalization, Input, Conv2D, GlobalAveragePooling2D,concatenate,Concatenate) WORKERS = 2 CHANNEL = 3 warnings.filterwarnings("ignore") SIZE = 300 NUM_CLASSES = 5<load_from_csv>
le = LabelEncoder() le.fit(["S","C","Q"]) test["Embarked"] = le.fit_transform(test["Embarked"] )
Titanic - Machine Learning from Disaster
8,325,212
df_train = pd.read_csv('.. /input/aptos2019-blindness-detection/train.csv') df_test = pd.read_csv('.. /input/aptos2019-blindness-detection/test.csv') x = df_train['id_code'] y = df_train['diagnosis'] x, y = shuffle(x, y, random_state=8) y = to_categorical(y, num_classes=NUM_CLASSES) train_x, valid_x, train_y, valid...
le.fit(["male","female"]) test["Sex"] = le.fit_transform(test["Sex"]) test["Male"] = pd.get_dummies(test["Sex"],drop_first=True) test.head()
Titanic - Machine Learning from Disaster
8,325,212
import torch import numpy as np import pandas as pd import matplotlib.pyplot as plt from matplotlib import style import seaborn as sns from sklearn.model_selection import StratifiedKFold from joblib import load, dump from sklearn.metrics import cohen_kappa_score from sklearn.metrics import confusion_matrix from fastai ...
scaler = StandardScaler()
Titanic - Machine Learning from Disaster
8,325,212
GlobalParams = collections.namedtuple('GlobalParams', [ 'batch_norm_momentum', 'batch_norm_epsilon', 'dropout_rate', 'num_classes', 'width_coefficient', 'depth_coefficient', 'depth_divisor', 'min_depth', 'drop_connect_rate', 'image_size']) BlockArgs = collections.namedtuple('BlockArgs', [ 'kernel_size', 'num_repeat', ...
s = scaler.fit(test[["Fare"]] )
Titanic - Machine Learning from Disaster
8,325,212
img = np.loadtxt(".. /input/aptos2019-blindness-detection/train.csv", delimiter=",", skiprows=1, usecols=(0), dtype = "str" ) img label = np.loadtxt(".. /input/aptos2019-blindness-detection/train.csv", delimiter=",", skiprows=1, usecols=(1), dtype = "int" ) label img_label_trains = [] img_label_validations = [] for...
test["Fare"] = s.transform(test[["Fare"]]) test.head()
Titanic - Machine Learning from Disaster
8,325,212
d = pd.DataFrame(data=data, columns=columns, dtype='str') d['diagnosis'] = d['diagnosis'].astype(int) d.to_csv("submission_xce_.csv",index=False )<define_variables>
x = test[['Male', 'Agegroup', 'SibSp','Pclass', 'Parch', 'Fare', 'Embarked']].values
Titanic - Machine Learning from Disaster
8,325,212
wei = [0.4, 0.6] ker = [submission3, d]<define_variables>
ypredict = tree.predict(x) ypredict
Titanic - Machine Learning from Disaster
8,325,212
numClass = 5 subemp = np.zeros(( ker[0].shape[0],numClass))<prepare_output>
submission = pd.DataFrame({'PassengerId':test['PassengerId'],'Survived':ypredict} )
Titanic - Machine Learning from Disaster
8,325,212
for i in range(len(ker)) : subemp[ker[i].index, ker[i].diagnosis.tolist() ] += wei[i] print(subemp) <save_to_csv>
filename = 'Titanic1.csv' submission.to_csv(filename,index=False) print('Saved file: ' + filename )
Titanic - Machine Learning from Disaster
7,976,123
subKER = pd.read_csv('.. /input/aptos2019-blindness-detection/sample_submission.csv') subKER['diagnosis'] = subemp.argmax(1 ).astype(int) subKER.to_csv('submissionKER.csv', index=False )<define_variables>
sns.set() pd.set_option('display.max_rows',None )
Titanic - Machine Learning from Disaster
7,976,123
score = [0.777, 0.758, 0.749, 0.783] weight = [0.29, 0.16, 0.09,0.06, 0.40] subData = [submission1, submission2, d, submission3, submission4] predsData = [preds1, preds2, preds4]<save_to_csv>
train=pd.read_csv('/kaggle/input/titanic/train.csv') test=pd.read_csv('/kaggle/input/titanic/test.csv' )
Titanic - Machine Learning from Disaster
7,976,123
numClass = 5 subTemp = np.zeros(( subData[0].shape[0],numClass)) for i in range(len(subData)) : subTemp[subData[i].index, subData[i].diagnosis.tolist() ] += weight[i] print(subTemp) sub = pd.read_csv('.. /input/aptos2019-blindness-detection/sample_submission.csv') sub['diagnosis'] = subTemp.argmax(1 ).astype(int) su...
print('Total by Sex') print(train.Sex.value_counts()) print(' Total Survived by Sex') print(train.loc[train.Survived==1].Sex.value_counts() )
Titanic - Machine Learning from Disaster
7,976,123
numClass = 5 subTemp = np.zeros(( subData[0].shape[0],numClass)) for i in range(len(subData)) : subTemp[subData[i].index, subData[i].diagnosis.tolist() ] += weight[i] print(subTemp) <save_to_csv>
train_with_age=train.query('Age!="NaN"') print('Total Survived by Age under 10') print(train_with_age.loc[train_with_age.Age <= 10].Survived.value_counts()) print(' Total Survived by Age between 10 and 20') print(train_with_age.loc[(train_with_age.Age > 10)&(train_with_age.Age <= 20)].Survived.value_counts()) prin...
Titanic - Machine Learning from Disaster
7,976,123
sub = pd.read_csv('.. /input/aptos2019-blindness-detection/sample_submission.csv') sub['diagnosis'] = subTemp.argmax(1 ).astype(int) sub.to_csv('submission.csv', index=False )<load_from_csv>
print('Total by Pclass') print(train.Pclass.value_counts()) print(' Total Survived by Pclass') print(train.loc[train.Survived==1].Pclass.value_counts() )
Titanic - Machine Learning from Disaster
7,976,123
<set_options>
complete=pd.concat([train,test],ignore_index=True )
Titanic - Machine Learning from Disaster
7,976,123
%matplotlib inline<define_variables>
complete.drop(['Cabin','Ticket'],axis=1,inplace=True )
Titanic - Machine Learning from Disaster
7,976,123
TRAINING = True<load_from_csv>
complete['Title']=complete.Name.str.extract('([A-Za-z]+)\.' )
Titanic - Machine Learning from Disaster
7,976,123
test_df = pd.read_csv('.. /input/aptos2019-blindness-detection/test.csv') print(test_df.shape) if TRAINING: train_df = pd.read_csv('.. /input/aptos2019-blindness-detection/train.csv') print(train_df.shape) train_df.head()<load_from_csv>
q1_fare=complete.Fare.quantile(0.25) q3_fare=complete.Fare.quantile(0.75) IQR=q3_fare-q1_fare min_val=q1_fare-(IQR*1.5) max_val=q3_fare+(IQR*1.5) print('Minimum: {}'.format(min_val)) print('Maximum: {}'.format(max_val))
Titanic - Machine Learning from Disaster
7,976,123
<define_variables>
for row in range(len(complete)) : if np.isnan(complete.loc[row,'Age'])==True: complete.loc[row,'Age']=complete.loc[(complete.Title==(complete.loc[row,'Title'])) &(complete.SibSp==(complete.loc[row,'SibSp'])) ].Age.mean()
Titanic - Machine Learning from Disaster
7,976,123
IMG_SIZE = 224 NB_CHANNELS = 3<categorify>
complete.Fare.fillna(complete.Fare.mean() ,inplace=True )
Titanic - Machine Learning from Disaster
7,976,123
def get_pad_width(im, new_shape, is_rgb=True): pad_diff = new_shape - im.shape[0], new_shape - im.shape[1] t, b = math.floor(pad_diff[0]/2), math.ceil(pad_diff[0]/2) l, r = math.floor(pad_diff[1]/2), math.ceil(pad_diff[1]/2) if is_rgb: pad_width =(( t,b),(l,r),(0, 0)) else: pad_width =(( t,b),(l,r)) return pad_width ...
complete.loc[complete.Age.isna() ]
Titanic - Machine Learning from Disaster
7,976,123
if TRAINING: N = train_df.shape[0] x_train = np.empty(( N, 224, 224, 3), dtype=np.uint8) for i, image_id in enumerate(tqdm(train_df['id_code'])) : x_train[i, :, :, :] = preprocess_image(cv2.imread( f'.. /input/aptos2019-blindness-detection/train_images/{image_id}.png' ))<prepare_x_and_y>
for row in range(len(complete)) : if np.isnan(complete.loc[row,'Age'])==True: complete.loc[row,'Age']=complete.loc[complete.Title==(complete.loc[row,'Title'])].Age.mean()
Titanic - Machine Learning from Disaster
7,976,123
N = test_df.shape[0] x_test = np.empty(( N, 224, 224, 3), dtype=np.uint8) for i, image_id in enumerate(tqdm(test_df['id_code'])) : x_test[i, :, :, :] = preprocess_image(cv2.imread( f'.. /input/aptos2019-blindness-detection/test_images/{image_id}.png' ))<categorify>
complete.drop(['Name','Embarked'],axis=1,inplace=True )
Titanic - Machine Learning from Disaster
7,976,123
if TRAINING: y_train = pd.get_dummies(train_df['diagnosis'] ).values print(x_train.shape) print(y_train.shape) print(x_test.shape )<split>
def sex(x): if x == 'male': return 0 else: return 1 complete['Sex']=complete.Sex.apply(sex )
Titanic - Machine Learning from Disaster
7,976,123
if TRAINING: x_train, x_val, y_train, y_val = train_test_split( x_train, y_train, test_size=0.2 )<filter>
def age(x): if x <= 10: return 0 elif x <= 20: return 1 elif x <= 30: return 2 elif x <= 45: return 3 else: return 4 complete['Age']=complete.Age.apply(age )
Titanic - Machine Learning from Disaster
7,976,123
<data_type_conversions>
train=complete.loc[0:890] test=complete.loc[891:]
Titanic - Machine Learning from Disaster
7,976,123
<categorify>
from sklearn.model_selection import train_test_split from sklearn.ensemble import RandomForestClassifier from sklearn.metrics import accuracy_score
Titanic - Machine Learning from Disaster
7,976,123
<prepare_x_and_y>
def tuning_random_forest(MaxLeafNodes,MaxDepth,NEstimators): model=RandomForestClassifier(random_state=1,max_leaf_nodes=MaxLeafNodes,max_depth=MaxDepth,n_estimators=NEstimators) X=train[['Age','Fare','Pclass','Sex']] y=train.Survived X_train, X_test, y_train, y_test=train_test_split(X,y,test_size=0.2,random_state=1) ...
Titanic - Machine Learning from Disaster
7,976,123
<data_type_conversions>
model=RandomForestClassifier(random_state=1,max_leaf_nodes=30,max_depth=10,n_estimators=200) X=train[['Age','Fare','Pclass','Sex']] y=train.Survived X_train, X_test, y_train, y_test=train_test_split(X,y,test_size=0.2,random_state=1) model.fit(X_train,y_train) predicted=model.predict(X_test) accuracy_score(y_test,pr...
Titanic - Machine Learning from Disaster
7,976,123
<randomize_order>
test2=test.loc[:,['Age','Fare','Pclass','Sex']] X=train[['Age','Fare','Pclass','Sex']] y=train.Survived model.fit(X,y) predicted=model.predict(test2 )
Titanic - Machine Learning from Disaster
7,976,123
if TRAINING: indexes = np.random.permutation(len(x_train)) x_train = x_train[indexes] y_train = y_train[indexes]<categorify>
test2=test.loc[:,['PassengerId']] submission=pd.DataFrame({'PassengerId':test2.PassengerId,'Survived':predicted}) submission=submission.astype('int32') submission.to_csv('submission.csv',index=False )
Titanic - Machine Learning from Disaster
5,213,367
if TRAINING: for i in range(3, -1, -1): y_train[:, i] = np.logical_or(y_train[:, i], y_train[:, i + 1]) y_val[:, i] = np.logical_or(y_val[:, i], y_val[:, i + 1]) print("Multilabel version:", y_train.sum(axis=0))<normalization>
train_data = '.. /input/titanic/train.csv' test_data = '.. /input/titanic/test.csv'
Titanic - Machine Learning from Disaster
5,213,367
if TRAINING: for i in tqdm(range(len(x_val))): x_val[i] = cv2.resize(x_val[i, 20: -20, 20: -20, :],(IMG_SIZE, IMG_SIZE)) for i in tqdm(range(len(x_train))): x_train[i] = cv2.resize(x_train[i, 20: -20, 20: -20, :],(IMG_SIZE, IMG_SIZE))<define_variables>
train_set = pd.read_csv(train_data) test_set = pd.read_csv(test_data )
Titanic - Machine Learning from Disaster
5,213,367
class MixupGenerator() : def __init__(self, X_train, y_train, seq=None, batch_size=32, alpha=0.2, shuffle=True, datagen=None): self.X_train = X_train self.y_train = y_train self.batch_size = batch_size self.alpha = alpha self.shuffle = shuffle self.sample_num = len(X_train) self.datagen = datagen self.seq = seq def __...
train_set.isnull().sum(axis=0 )
Titanic - Machine Learning from Disaster
5,213,367
BATCH_SIZE = 32 def create_datagen() : return ImageDataGenerator( preprocessing_function=seq.augment_image ) if TRAINING: data_generator = create_datagen().flow(x_train, y_train, batch_size=BATCH_SIZE) mixup_generator = MixupGenerator(x_train, y_train, seq=seq, batch_size=BATCH_SIZE, alpha=0.2 )()<define_variables>
%matplotlib inline sns.set_style('whitegrid') warnings.filterwarnings('ignore' )
Titanic - Machine Learning from Disaster
5,213,367
true_labels = np.array([1, 0, 1, 1, 0, 1]) pred_labels = np.array([1, 0, 0, 0, 0, 1] )<compute_test_metric>
train_set.isnull().sum()
Titanic - Machine Learning from Disaster
5,213,367
accuracy_score(true_labels, pred_labels )<compute_test_metric>
train_set['Cabin'].isnull().sum()
Titanic - Machine Learning from Disaster
5,213,367
cohen_kappa_score(true_labels, pred_labels )<predict_on_test>
train_set['Cabin'].value_counts().head()
Titanic - Machine Learning from Disaster
5,213,367
class Metrics(Callback): def on_train_begin(self, logs={}): self.val_kappas = [] def on_epoch_end(self, epoch, logs={}): X_val, y_val = self.validation_data[:2] y_val =(y_val.sum(axis=1)- 1 ).clip(0, 4) y_pred = self.model.predict(X_val)> 0.5 y_pred =(y_pred.astype(int ).sum(axis=1)- 1 ).clip(0, 4) _val_kappa = cohen...
merged = pd.concat([train_set,test_set], sort = False) merged.head(3 )
Titanic - Machine Learning from Disaster
5,213,367
base_model = Xception( weights=None, include_top=False, input_shape=(224,224,3) ) base_model.load_weights(".. /input/keras-pretrained-models/xception_weights_tf_dim_ordering_tf_kernels_notop.h5" )<choose_model_class>
merged['Cabin'].value_counts().head(3 )
Titanic - Machine Learning from Disaster
5,213,367
def build_model() : model = Sequential() model.add(base_model) model.add(layers.GlobalAveragePooling2D()) model.add(layers.Dropout(0.5)) model.add(layers.Dense(5, activation='sigmoid')) model.compile( loss='binary_crossentropy', optimizer=Adam(lr=0.00005), metrics=['accuracy'] ) return model<train_on_grid>
merged['Cabin'].fillna('X', inplace=True )
Titanic - Machine Learning from Disaster
5,213,367
if TRAINING: kappa_metrics = Metrics() rlr = callbacks.ReduceLROnPlateau(factor=0.5, patience=4, verbose=1) es = callbacks.EarlyStopping(patience=10, verbose=1, mode="min") history = model.fit_generator( data_generator, steps_per_epoch=x_train.shape[0] / BATCH_SIZE, epochs=200, validation_data=(x_val, y_val), callba...
merged['Title'] = merged['Name'].str.extract('([A-Za-z]+)\.') merged['Title'].head()
Titanic - Machine Learning from Disaster
5,213,367
if TRAINING: with open('history.json', 'w')as f: json.dump(str(history.history), f) history_df = pd.DataFrame(history.history) history_df[['loss', 'val_loss']].plot() history_df[['acc', 'val_acc']].plot()<data_type_conversions>
merged['Title'].value_counts()
Titanic - Machine Learning from Disaster
5,213,367
<save_to_csv>
merged['Title'].replace(to_replace = ['Dr', 'Rev', 'Col', 'Major', 'Capt'], value = 'Officer', inplace=True) merged['Title'].replace(to_replace = ['Dona', 'Jonkheer', 'Countess', 'Sir', 'Lady', 'Don'], value = 'Aristocrat', inplace = True) merged['Title'].replace({'Mlle':'Miss', 'Ms':'Miss', 'Mme':'Mrs'}, inplace = T...
Titanic - Machine Learning from Disaster
5,213,367
if TRAINING: weights_path = 'model.h5' else: weights_path = '.. /input/weights/model.h5' model.load_weights(weights_path) y_test = model.predict(x_test)> 0.5 y_test =(y_test.astype(int ).sum(axis=1)- 1 ).clip(0, 4) test_df['diagnosis'] = y_test test_df.to_csv('submission.csv',index=False )<set_options>
merged['SibSp'].value_counts()
Titanic - Machine Learning from Disaster
5,213,367
%reload_ext autoreload %autoreload 2 %matplotlib inline %matplotlib inline <define_variables>
merged['Parch'].value_counts()
Titanic - Machine Learning from Disaster
5,213,367
package_dir = '.. /input/efficientnet/efficientnet_pytorch' sys.path.insert(0, package_dir) <load_pretrained>
merged['Family_size'] = merged.SibSp + merged.Parch + 1 merged['Family_size'].value_counts()
Titanic - Machine Learning from Disaster
5,213,367
md_ef = EfficientNet.from_pretrained('efficientnet-b5', num_classes=1 )<load_from_csv>
merged['Family_size'].replace(to_replace = [1], value = 'single', inplace = True) merged['Family_size'].replace(to_replace = [2,3], value = 'small', inplace = True) merged['Family_size'].replace(to_replace = [4,5], value = 'medium', inplace = True) merged['Family_size'].replace(to_replace = [6, 7, 8, 11], value = 'l...
Titanic - Machine Learning from Disaster
5,213,367
def get_df() : base_image_dir = os.path.join('.. ', 'input/aptos2019-blindness-detection/') train_dir = os.path.join(base_image_dir,'train_images/') df = pd.read_csv(os.path.join(base_image_dir, 'train.csv')) df['path'] = df['id_code'].map(lambda x: os.path.join(train_dir,'{}.png'.format(x))) df = df.drop(columns=['...
merged['Family_size'].value_counts()
Titanic - Machine Learning from Disaster
5,213,367
bs = 64 sz = 224 tfms = get_transforms(do_flip=True,flip_vert=True )<compute_test_metric>
ticket = [] for x in list(merged['Ticket']): if x.isdigit() : ticket.append('N') else: ticket.append(x.replace('.','' ).replace('/','' ).strip().split(' ')[0]) merged['Ticket'] = ticket
Titanic - Machine Learning from Disaster
5,213,367
def qk(y_pred, y): return torch.tensor(cohen_kappa_score(torch.round(y_pred), y, weights='quadratic'), device='cuda:0' )<load_pretrained>
merged['Ticket'].value_counts()
Titanic - Machine Learning from Disaster
5,213,367
learn = Learner(data, md_ef, metrics = [qk], model_dir="models" ).to_fp16() learn.data.add_test(ImageList.from_df(test_df, '.. /input/aptos2019-blindness-detection', folder='test_images', suffix='.png'))<train_model>
merged['Ticket'] = merged['Ticket'].apply(lambda x: x[0]) merged['Ticket'].value_counts()
Titanic - Machine Learning from Disaster
5,213,367
learn.fit_one_cycle(10,1e-3 )<compute_train_metric>
outliers(merged['Fare'] )
Titanic - Machine Learning from Disaster
5,213,367
class OptimizedRounder(object): def __init__(self): self.coef_ = 0 def _kappa_loss(self, coef, X, y): X_p = np.copy(X) for i, pred in enumerate(X_p): if pred < coef[0]: X_p[i] = 0 elif pred >= coef[0] and pred < coef[1]: X_p[i] = 1 elif pred >= coef[1] and pred < coef[2]: X_p[i] = 2 elif pred >= coef[2] and pred < coe...
merged.isnull().sum()
Titanic - Machine Learning from Disaster
5,213,367
def run_subm(learn=learn, coefficients=[0.5, 1.5, 2.5, 3.5]): opt = OptimizedRounder() preds,y = learn.get_preds(DatasetType.Test) tst_pred = opt.predict(preds, coefficients) test_df.diagnosis = tst_pred.astype(int) test_df.to_csv('submission.csv',index=False) print('done' )<set_options>
merged['Embarked'].value_counts()
Titanic - Machine Learning from Disaster
5,213,367
%reload_ext autoreload %autoreload 2 %matplotlib inline <set_options>
merged['Embarked'].fillna(value = 'S', inplace=True )
Titanic - Machine Learning from Disaster
5,213,367
warnings.filterwarnings('always') warnings.filterwarnings('ignore') %matplotlib inline style.use('fivethirtyeight') sns.set(style='whitegrid', color_codes=True) <set_options>
merged['Fare'].fillna(value= merged['Fare'].median() , inplace=True )
Titanic - Machine Learning from Disaster
5,213,367
def seed_everything(seed): random.seed(seed) os.environ['PYTHONHASHSEED'] = str(seed) np.random.seed(seed) torch.manual_seed(seed) torch.cuda.manual_seed(seed) torch.backends.cudnn.deterministic = True seed_everything(42 )<feature_engineering>
df = merged.loc[:, ['Sex', 'Pclass', 'Embarked', 'Title', 'Family_size', 'Parch', 'SibSp', 'Cabin', 'Ticket']] LE = LabelEncoder() df = df.apply(LE.fit_transform) df.head(5)
Titanic - Machine Learning from Disaster
5,213,367
temp = vision.data.open_image <load_from_csv>
df['Age'] = merged['Age'] df.head(2 )
Titanic - Machine Learning from Disaster