kernel_id
int64
24.2k
23.3M
prompt
stringlengths
8
1.85M
completetion
stringlengths
1
182k
comp_name
stringlengths
5
57
9,177,777
<count_unique_values><EOS>
output = pd.DataFrame({'PassengerId': Id, 'Survived': final_predictions}) output.to_csv('submission.csv', index=False )
Titanic - Machine Learning from Disaster
8,719,787
<SOS> metric: categorizationaccuracy Kaggle data source: titanic-machine-learning-from-disaster<define_variables>
import numpy as np import pandas as pd import seaborn as sns import matplotlib.pyplot as plt from sklearn.preprocessing import StandardScaler, LabelEncoder from sklearn.ensemble import RandomForestClassifier, GradientBoostingClassifier from sklearn.neighbors import KNeighborsClassifier from xgboost import XGBClassifier...
Titanic - Machine Learning from Disaster
8,719,787
MODEL_VERSION = 'v15_param_tuning' <define_variables>
train = pd.read_csv(".. /input/titanic/train.csv") test = pd.read_csv(".. /input/titanic/test.csv") testid = test['PassengerId'] train_len = len(train) y = train['Survived'] X = pd.concat([train, test] )
Titanic - Machine Learning from Disaster
8,719,787
TEST_RUN = False pd.set_option('display.max_columns', 50) KAGGLE_DATA_FOLDER = '/kaggle/input/m5-forecasting-accuracy' BACKWARD_LAG = 60 END_DAY = 1913 BEGIN_DATE = '2013-08-01' BEGIN_DAY = str(( datetime.strptime(BEGIN_DATE, '%Y-%m-%d')- datetime.strptime('2011-01-29', '%Y-%m-%d')).days) TRAIN_SPLIT = '2016-03-27' E...
X['Title'] = X['Name'] for name_string in X['Name']: X['Title'] = X['Name'].str.extract('([A-Za-z]+)\.', expand=True) mapping = {'Mlle': 'Miss', 'Major': 'Mr', 'Col': 'Mr', 'Sir': 'Mr', 'Don': 'Mr', 'Mme': 'Miss', 'Jonkheer': 'Mr', 'Lady': 'Mrs', 'Capt': 'Mr', 'Countess': 'Mrs', 'Ms': 'Miss', 'Dona': 'Mrs'} X.replace(...
Titanic - Machine Learning from Disaster
8,719,787
CALENDAR_DTYPES = { 'date': 'str', 'wm_yr_wk': 'int16', 'weekday': 'category', 'wday': 'int16', 'month': 'int16', 'year': 'int16', 'd': 'object', 'event_name_1': 'category', 'event_type_1': 'category', 'event_name_2': 'category', 'event_type_2': 'category', 'snap_CA': 'int16', 'snap_TX': 'int16', 'snap_WI': 'int16' } P...
X['Family_Size'] = X['Parch'] + X['SibSp']
Titanic - Machine Learning from Disaster
8,719,787
def load_data(train=True): print("Loading train and validation data") numcols = [f"d_{day}" for day in range(int(BEGIN_DAY),END_DAY+1)] catcols = ['id', 'item_id', 'dept_id','store_id', 'cat_id', 'state_id'] dtype = {numcol:"float32" for numcol in numcols} dtype.update({col: "category" for col in catcols if col != "...
X['Last_Name'] = X['Name'].apply(lambda x: str.split(x, ",")[0]) X['Fare'].fillna(X['Fare'].mean() , inplace=True) DEFAULT_SURVIVAL_VALUE = 0.5 X['Family_Survival'] = DEFAULT_SURVIVAL_VALUE for grp, grp_df in X[['Survived','Name', 'Last_Name', 'Fare', 'Ticket', 'PassengerId', 'SibSp', 'Parch', 'Age', 'Cabin']].groupb...
Titanic - Machine Learning from Disaster
8,719,787
def make_lag_features(strain): print('in dataframe:', strain.shape) print("headers:", strain.columns) lags = [7, 28] lag_cols = ['lag_{}'.format(lag)for lag in lags ] for lag, lag_col in zip(lags, lag_cols): strain[lag_col] = strain[['id', 'sales']].groupby('id')['sales'].shift(lag) print('lag sales done') window...
X['Fare'].fillna(X['Fare'].median() , inplace = True) X['FareBin'] = pd.qcut(X['Fare'], 5) label = LabelEncoder() X['FareBin_Code'] = label.fit_transform(X['FareBin']) X.drop(['Fare'], 1, inplace=True )
Titanic - Machine Learning from Disaster
8,719,787
%%time sales_train_validation = load_data()<data_type_conversions>
X['AgeBin'] = pd.qcut(X['Age'], 4) label = LabelEncoder() X['AgeBin_Code'] = label.fit_transform(X['AgeBin']) X.drop(['Age'], 1, inplace=True )
Titanic - Machine Learning from Disaster
8,719,787
sales_train_validation["sale"] =(( sales_train_validation['sell_price'] * 100 % 10)< 6 ).astype('int8' )<feature_engineering>
X['Sex'].replace(['male','female'],[0,1],inplace=True) X.drop(['Name', 'PassengerId', 'SibSp', 'Parch', 'Ticket', 'Cabin', 'Embarked', 'Last_Name', 'FareBin', 'AgeBin', 'Survived'], axis = 1, inplace = True )
Titanic - Machine Learning from Disaster
8,719,787
%%time make_lag_features(sales_train_validation) make_date_features(sales_train_validation )<define_variables>
X_train = X[:train_len] X_test = X[train_len:] y_train = y
Titanic - Machine Learning from Disaster
8,719,787
total = len(sales_train_validation['event_type_2']) zero = len(sales_train_validation.loc[sales_train_validation['event_type_2'] == 0]) one = len(sales_train_validation.loc[sales_train_validation['event_type_2'] == 1]) two = len(sales_train_validation.loc[sales_train_validation['event_type_2'] == 2]) print('0: '+ s...
scaler = StandardScaler() X_train = scaler.fit_transform(X_train) X_test = scaler.transform(X_test )
Titanic - Machine Learning from Disaster
8,719,787
sales_train_validation.isnull().sum()<categorify>
kfold = StratifiedKFold(n_splits=8 )
Titanic - Machine Learning from Disaster
8,719,787
before = len(sales_train_validation) sales_train_validation.dropna(inplace = True) after = len(sales_train_validation) print(f"Reduced {(before-after)/before}%") <split>
RFC = RandomForestClassifier() rf_param_grid = {"max_depth": [None], "max_features": [3,"sqrt", "log2"], "min_samples_split": [2, 4], "min_samples_leaf": [5, 7], "bootstrap": [False, True], "n_estimators" :[200, 500], "criterion": ["gini", "entropy"]} rf_param_grid_best = {"max_depth": [None], "max_features": [3], "min...
Titanic - Machine Learning from Disaster
8,719,787
print("Splitting data into train, validation, evaluation set") <features_selection>
KNN = KNeighborsClassifier() knn_param_grid = {'algorithm': ['auto'], 'weights': ['uniform', 'distance'], 'leaf_size': [20, 25, 30], 'n_neighbors': [12, 14, 16]} gs_knn = GridSearchCV(KNN, param_grid = knn_param_grid, cv=kfold, scoring = "roc_auc", n_jobs= 4, verbose = 1) gs_knn.fit(X_train, y_train) KNN.fit(X_train,...
Titanic - Machine Learning from Disaster
8,719,787
%%time np.random.seed(777) validation_idx = np.random.choice(sales_train_validation.index.values, 2_000_000, replace = False) train_idx = np.setdiff1d(sales_train_validation.index.values, validation_idx) train = sales_train_validation.loc[train_idx] validation = sales_train_validation.loc[validation_idx] evaluation ...
GB = GradientBoostingClassifier() gb_param_grid = {'loss' : ["deviance"], 'n_estimators' : [1000], 'learning_rate': [0.02, 0.05], 'min_samples_split': [15, 20, 25], 'max_depth': [4, 6], 'min_samples_leaf': [50, 60], 'max_features': ["sqrt"] } gb_param_grid_best = {'loss' : ["deviance"], 'n_estimators' : [1000], 'learni...
Titanic - Machine Learning from Disaster
8,719,787
print("Train:", train.shape) print("Validation:", validation.shape) print("Evaluation:", evaluation.shape )<define_variables>
XGB = XGBClassifier() xgb_param_grid = {'learning_rate':[0.05, 0.1], 'reg_lambda':[0.3, 0.5], 'gamma': [0.8, 1], 'subsample': [0.8, 1], 'max_depth': [2, 3], 'n_estimators': [200, 300] } xgb_param_grid_best = {'learning_rate':[0.1], 'reg_lambda':[0.3], 'gamma': [1], 'subsample': [0.8], 'max_depth': [2], 'n_estimators': ...
Titanic - Machine Learning from Disaster
8,719,787
categorical_features = [ 'item_id', 'dept_id', 'store_id', 'cat_id', 'state_id', 'event_name_1', 'event_type_1', 'event_name_2', 'event_type_2' ]<create_dataframe>
knn1 = KNeighborsClassifier(algorithm='auto', leaf_size=26, metric='minkowski', metric_params=None, n_jobs=1, n_neighbors=6, p=2, weights='uniform') knn1.fit(X_train, y_train )
Titanic - Machine Learning from Disaster
8,719,787
train_pool = lgb.Dataset( data=train[train_columns], label=train["sales"], categorical_feature=categorical_features, free_raw_data=False) del train; gc.collect()<create_dataframe>
y_pred = knn1.predict(X_test) test_Survived = pd.Series(y_pred, name="Survived") results = pd.concat([testid,test_Survived],axis=1) results.to_csv("submit.csv",index=False )
Titanic - Machine Learning from Disaster
11,609,919
val_pool = lgb.Dataset( data=validation[train_columns], label=validation["sales"], categorical_feature=categorical_features, free_raw_data=False ) del validation; del evaluation; gc.collect()<init_hyperparams>
%matplotlib inline warnings.filterwarnings('ignore') warnings.filterwarnings('ignore', category=DeprecationWarning )
Titanic - Machine Learning from Disaster
11,609,919
if TEST_RUN: ITERATIONS=1 else: ITERATIONS = 2000 params = { "objective" : "poisson", "metric" :"rmse", "force_row_wise" : True, "learning_rate" : 0.075, "sub_row" : 0.75, "bagging_freq" : 1, "lambda_l2" : 0.1, "metric": ["rmse"], 'verbosity': 1, 'num_iterations' : ITERATIONS, 'num_leaves': 128, "min_data_in_leaf": 100...
train = pd.read_csv('/kaggle/input/titanic/train.csv') test = pd.read_csv('/kaggle/input/titanic/test.csv' )
Titanic - Machine Learning from Disaster
11,609,919
%%time if TASK_TYPE=='GPU': model = "todo" else: model = lgb.train( params, train_pool, valid_sets = val_pool, verbose_eval=20 )<save_model>
train['Survived'].value_counts()
Titanic - Machine Learning from Disaster
11,609,919
model.save_model("model_{}.lgb".format(MODEL_VERSION))<set_options>
def detect_outlier(df,n,cols): outlier_indices = [] for i in cols: Q1 = np.percentile(df[i], 25) Q3 = np.percentile(df[i], 75) IQR = Q3 - Q1 outlier_step = 1.5*IQR outlier_index_list = df[(df[i] < Q1-outlier_step)|(df[i] > Q3+outlier_step)].index outlier_indices.extend(outlier_index_list) outlier_indices = Counter(o...
Titanic - Machine Learning from Disaster
11,609,919
del train_pool, val_pool; gc.collect()<feature_engineering>
outliers_to_drop = detect_outlier(train,2,['Age', 'SibSp', 'Parch', 'Fare']) train.loc[outliers_to_drop]
Titanic - Machine Learning from Disaster
11,609,919
df = load_data(train=False) make_date_features(df )<data_type_conversions>
train = train.drop(outliers_to_drop, axis = 0 ).reset_index(drop=True )
Titanic - Machine Learning from Disaster
11,609,919
df["sale"] =(( df['sell_price'] * 100 % 10)< 6 ).astype('int8' )<feature_engineering>
targets = train.Survived train.drop(['Survived'], 1, inplace=True) combined = train.append(test) combined.reset_index(inplace=True) combined.drop(['index', 'PassengerId'], inplace=True, axis=1 )
Titanic - Machine Learning from Disaster
11,609,919
def lag_features_for_day(dt, day): print(type(dt)) lags = [7, 28] lag_cols = [f"lag_{lag}" for lag in lags] for lag, lag_col in zip(lags, lag_cols): dt.loc[dt['date'] == str(day), lag_col] = \ dt.loc[dt['date'] == str(day-timedelta(days=lag)) , 'sales'].values windows = [7, 28] for window in windows: for lag, lag_col i...
titles = set() for name in train['Name']: titles.add(name.split(',')[1].split('.')[0].strip()) print(titles )
Titanic - Machine Learning from Disaster
11,609,919
%%time END_DATE = EVAL_SPLIT ZERO_THRESHOLD = 0.01 PREDICT_DAYS = 28 for f_day in tqdm(range(1,PREDICT_DAYS+1)) : pred_date =(datetime.strptime(END_DATE, '%Y-%m-%d')+ timedelta(days=f_day)).date() print(f"Forecasting day {END_DAY+f_day}, date: {str(pred_date)}") pred_begin_date = pred_date - timedelta(days=BACKWARD_LA...
combined['Title'] = combined['Name'].str.extract('([A-Za-z]+)\.', expand=False )
Titanic - Machine Learning from Disaster
11,609,919
del prediction_data gc.collect()<feature_engineering>
combined['Title'] = combined['Title'].replace(['Lady', 'Countess','Capt', 'Col', 'Don', 'Dr', 'Major', 'Rev', 'Sir', 'Jonkheer', 'Dona'], 'Rare') combined['Title'] = combined['Title'].replace('Mlle', 'Miss') combined['Title'] = combined['Title'].replace('Ms', 'Miss') combined['Title'] = combined['Title'].replace('Mm...
Titanic - Machine Learning from Disaster
11,609,919
submission_val = df.loc[df['date'] > END_DATE, ['id', 'day', 'sales']].copy() submission_val.loc[submission_val['sales'] < 0, 'sales'] = 0 submission_val.sort_values('id', inplace=True) submission_val['day'] = submission_val['day'].apply(lambda x: 'F{}'.format(x - END_DAY)) print(submission_val.columns )<prepare_outpu...
combined["Sex"][combined["Sex"] == "male"] = 0 combined["Sex"][combined["Sex"] == "female"] = 1 combined["Sex"] = combined["Sex"].astype(int )
Titanic - Machine Learning from Disaster
11,609,919
submission_eval = submission_val.copy() submission_eval['id'] = submission_eval['id'].str.replace('validation', 'evaluation') submission = pd.concat([submission_val, submission_eval], axis=0, sort=False) print(submission.columns) print(submission.head(1))<save_to_csv>
combined['Age'] = combined.groupby('Pclass')['Age'].transform(lambda x: x.fillna(x.median()))
Titanic - Machine Learning from Disaster
11,609,919
submission.to_csv('submission.csv', index=False) print('Submission shape', submission.shape )<load_from_csv>
combined["Age"] = combined["Age"].astype(int )
Titanic - Machine Learning from Disaster
11,609,919
submission0 = pd.read_csv('/kaggle/input/m5-final-models/submission_LSTM.csv') submission1 = pd.read_csv('/kaggle/input/m5-final-models/submission_XGBoost.csv') submission2 = pd.read_csv('/kaggle/input/m5-final-models/submission_LGBM.csv') submission3 = pd.read_csv('/kaggle/input/m5-final-models/submission_prophet.c...
combined['Ticket'] = tickets
Titanic - Machine Learning from Disaster
11,609,919
<load_from_csv>
combined = pd.get_dummies(combined, columns= ["Ticket"], prefix = "T" )
Titanic - Machine Learning from Disaster
11,609,919
calendar = pd.read_csv('/kaggle/input/m5-forecasting-accuracy/calendar.csv') prices = pd.read_csv('/kaggle/input/m5-forecasting-accuracy/sell_prices.csv') validation = pd.read_csv('/kaggle/input/m5-forecasting-accuracy/sales_train_evaluation.csv') sample_sub = pd.read_csv('/kaggle/input/m5-forecasting-accuracy/sampl...
combined['Fare'] = combined.groupby("Pclass")['Fare'].transform(lambda x: x.fillna(x.median()))
Titanic - Machine Learning from Disaster
11,609,919
def perfect_sub() : submission = OperateBaseModels(submission0,submission1, a=0, b=1) diference = validation.merge(submission, how='right') shift= 56 perfect_submission = diference[diference.columns[-shift:-shift+28]] col = { 'd_'+str(1914+i):'F'+str(i+1)for i in range(28)} perfect_submission = perfect_submission.ren...
combined['Zero_Fare'] = combined['Fare'].map(lambda x: 1 if x == 0 else(0))
Titanic - Machine Learning from Disaster
11,609,919
class WRMSSEEvaluator(object): def __init__(self, train_df: pd.DataFrame, valid_df: pd.DataFrame, calendar: pd.DataFrame, prices: pd.DataFrame): train_y = train_df.loc[:, train_df.columns.str.startswith('d_')] train_target_columns = train_y.columns.tolist() weight_columns = train_y.iloc[:, -28:].columns.tolist() train_...
def fare_category(fr): if fr <= 7.91: return 1 elif fr <= 14.454 and fr > 7.91: return 2 elif fr <= 31 and fr > 14.454: return 3 return 4
Titanic - Machine Learning from Disaster
11,609,919
def function(solution): solution = np.abs(solution) submission = OperateBaseModels(submission0,submission1, a=solution[0], b=solution[1]) submission = OperateBaseModels(submission,submission2, a=1, b=solution[2]) submission = OperateBaseModels(submission,submission3, a=1, b=solution[3]) submission = OperateBaseMode...
combined['Fare_cat'] = combined['Fare'].apply(fare_category )
Titanic - Machine Learning from Disaster
11,609,919
diference = validation.merge(submission,how='left') error = np.mean(np.mean(np.abs(perfect_sub._get_numeric_data() -submission._get_numeric_data())) )<save_to_csv>
combined["Embarked"] = combined["Embarked"].fillna("C") combined["Embarked"][combined["Embarked"] == "S"] = 1 combined["Embarked"][combined["Embarked"] == "C"] = 2 combined["Embarked"][combined["Embarked"] == "Q"] = 3 combined["Embarked"] = combined["Embarked"].astype(int )
Titanic - Machine Learning from Disaster
11,609,919
submission.to_csv("submission.csv", index=False) submission<define_variables>
combined['FamilySize'] = combined['SibSp'] + combined['Parch'] + 1
Titanic - Machine Learning from Disaster
11,609,919
MODEL_VERSION = 'v10' <define_variables>
combined['FamilySize_cat'] = combined['FamilySize'].map(lambda x: 1 if x == 1 else(2 if 5 > x >= 2 else(3 if 8 > x >= 5 else 4) ))
Titanic - Machine Learning from Disaster
11,609,919
TEST_RUN = False pd.set_option('display.max_columns', 50) KAGGLE_DATA_FOLDER = '/kaggle/input/m5-forecasting-accuracy' PATH_TO_CAT0="/kaggle/input/models-per-cat-with-sale/model_cat0_v10.lgb" PATH_TO_CAT1="/kaggle/input/models-per-cat-with-sale/model_cat1_v10.lgb" PATH_TO_CAT2="/kaggle/input/models-per-cat-with-sale/m...
combined['Alone'] = [1 if i == 1 else 0 for i in combined['FamilySize']]
Titanic - Machine Learning from Disaster
11,609,919
CALENDAR_DTYPES = { 'date': 'str', 'wm_yr_wk': 'int16', 'weekday': 'category', 'wday': 'int16', 'month': 'int16', 'year': 'int16', 'd': 'object', 'event_name_1': 'category', 'event_type_1': 'category', 'event_name_2': 'category', 'event_type_2': 'category', 'snap_CA': 'int16', 'snap_TX': 'int16', 'snap_WI': 'int16' } P...
combined['Cabin'] = combined['Cabin'].fillna('U' )
Titanic - Machine Learning from Disaster
11,609,919
def load_data(train=True): print("Loading train and validation data") numcols = [f"d_{day}" for day in range(int(BEGIN_DAY),END_DAY+1)] catcols = ['id', 'item_id', 'dept_id','store_id', 'cat_id', 'state_id'] dtype = {numcol:"float32" for numcol in numcols} dtype.update({col: "category" for col in catcols if col != "...
combined['Cabin'] = combined['Cabin'].map(lambda x: re.compile("([a-zA-Z]+)" ).search(x ).group() )
Titanic - Machine Learning from Disaster
11,609,919
def make_lag_features(strain): print('in dataframe:', strain.shape) print("headers:", strain.columns) lags = [7, 28] lag_cols = ['lag_{}'.format(lag)for lag in lags ] for lag, lag_col in zip(lags, lag_cols): strain[lag_col] = strain[['id', 'sales']].groupby('id')['sales'].shift(lag) print('lag sales done') window...
combined['Cabin'].value_counts()
Titanic - Machine Learning from Disaster
11,609,919
model_all = lgb.Booster(model_file = PATH_MODELS[0]) model_cat0 = lgb.Booster(model_file = PATH_MODELS[1]) model_cat1 = lgb.Booster(model_file = PATH_MODELS[2]) model_cat2 = lgb.Booster(model_file = PATH_MODELS[3]) model_per = [model_cat0, model_cat1, model_cat2]<data_type_conversions>
cabin_category = {'A':9, 'B':8, 'C':7, 'D':6, 'E':5, 'F':4, 'G':3, 'T':2, 'U':1}
Titanic - Machine Learning from Disaster
11,609,919
df = load_data(train=False) df["sale"] =(( df['sell_price'] * 100 % 10)< 6 ).astype('int8') make_lag_features(df) make_date_features(df )<feature_engineering>
combined['Cabin'] = combined['Cabin'].map(cabin_category )
Titanic - Machine Learning from Disaster
11,609,919
def lag_features_for_day(dt, day): print(type(dt)) lags = [7, 28] lag_cols = [f"lag_{lag}" for lag in lags] for lag, lag_col in zip(lags, lag_cols): dt.loc[dt['date'] == str(day), lag_col] = \ dt.loc[dt['date'] == str(day-timedelta(days=lag)) , 'sales'].values windows = [7, 28] for window in windows: for lag, lag_col i...
dummy_col=['Title', 'Sex', 'Age_cat', 'SibSp', 'Parch', 'Fare_cat', 'Cabin', 'Embarked', 'Pclass', 'FamilySize_cat']
Titanic - Machine Learning from Disaster
11,609,919
%%time END_DATE = EVAL_SPLIT ZERO_THRESHOLD = 0.01 PREDICT_DAYS = 28 for f_day in tqdm(range(1,PREDICT_DAYS+1)) : pred_date =(datetime.strptime(END_DATE, '%Y-%m-%d')+ timedelta(days=f_day)).date() print(f"Forecasting day {END_DAY+f_day}, date: {str(pred_date)}") pred_begin_date = pred_date - timedelta(days=BACKWARD_LA...
dummy = pd.get_dummies(combined[dummy_col], columns=dummy_col, drop_first=False )
Titanic - Machine Learning from Disaster
11,609,919
del prediction_data gc.collect()<feature_engineering>
combined = pd.concat([dummy, combined], axis = 1 )
Titanic - Machine Learning from Disaster
11,609,919
submission_val = df.loc[df['date'] > END_DATE, ['id', 'day', 'sales']].copy() submission_val.loc[submission_val['sales'] < 0, 'sales'] = 0 submission_val.sort_values('id', inplace=True) submission_val['day'] = submission_val['day'].apply(lambda x: 'F{}'.format(x - END_DAY)) print(submission_val.columns )<prepare_outpu...
combined['FareCat_Sex'] = combined['Fare_cat']*combined['Sex'] combined['Pcl_Sex'] = combined['Pclass']*combined['Sex'] combined['Pcl_Title'] = combined['Pclass']*combined['Title'] combined['Age_cat_Sex'] = combined['Age_cat']*combined['Sex'] combined['Age_cat_Pclass'] = combined['Age_cat']*combined['Pclass'] combined[...
Titanic - Machine Learning from Disaster
11,609,919
submission_eval = submission_val.copy() submission_eval['id'] = submission_eval['id'].str.replace('validation', 'evaluation') submission = pd.concat([submission_val, submission_eval], axis=0, sort=False) print(submission.columns) print(submission.head(1))<save_to_csv>
X_train = combined[:train.shape[0]] X_test = combined[train.shape[0]:] y = targets X_train['Y'] = y df = X_train X = df.drop('Y', axis=1) y = df.Y
Titanic - Machine Learning from Disaster
11,609,919
submission.to_csv('submission.csv', index=False) print('Submission shape', submission.shape )<import_modules>
from sklearn.model_selection import train_test_split from sklearn.metrics import accuracy_score
Titanic - Machine Learning from Disaster
11,609,919
import os import gc import numpy as np import pandas as pd import matplotlib.pyplot as plt from datetime import datetime, timedelta, date from tqdm.notebook import tqdm import lightgbm as lgb<define_variables>
x_train, x_valid, y_train, y_valid = train_test_split(X, y, test_size=0.2, random_state=10 )
Titanic - Machine Learning from Disaster
11,609,919
TEST_RUN = False MODEL_VERSION = 'final' pd.set_option('display.max_columns', 50) KAGGLE_DATA_FOLDER = '/kaggle/input/m5-forecasting-accuracy' SUBMISSION_PATH = "/kaggle/input/lgbmindividualbestsubmission/submission.csv" MODEL_PATH = "/kaggle/input/lgbmindividualbestsubmission/model_v13_param_tuning.lgb" BACKWARD_LAG ...
d_train = xgb.DMatrix(x_train, label=y_train) d_valid = xgb.DMatrix(x_valid, label=y_valid) d_test = xgb.DMatrix(X_test )
Titanic - Machine Learning from Disaster
11,609,919
CALENDAR_DTYPES = { 'date': 'str', 'wm_yr_wk': 'int16', 'weekday': 'category', 'wday': 'int16', 'month': 'int16', 'year': 'int16', 'd': 'object', 'event_name_1': 'category', 'event_type_1': 'category', 'event_name_2': 'category', 'event_type_2': 'category', 'snap_CA': 'int16', 'snap_TX': 'int16', 'snap_WI': 'int16' } P...
params = { 'objective':'binary:logistic', 'eta': 0.3, 'max_depth':9, 'learning_rate':0.03, 'eval_metric':'auc', 'min_child_weight':1, 'subsample':1, 'colsample_bytree':0.4, 'seed':29, 'reg_lambda':2.8, 'reg_alpha':0, 'gamma':0, 'scale_pos_weight':1, 'n_estimators': 600, 'nthread':-1 }
Titanic - Machine Learning from Disaster
11,609,919
def load_data(train=True): print("Loading train and validation data") numcols = [f"d_{day}" for day in range(int(BEGIN_DAY),END_DAY+1)] catcols = ['id', 'item_id', 'dept_id','store_id', 'cat_id', 'state_id'] dtype = {numcol:"float32" for numcol in numcols} dtype.update({col: "category" for col in catcols if col != "...
watchlist = [(d_train, 'train'),(d_valid, 'valid')] nrounds=10000
Titanic - Machine Learning from Disaster
11,609,919
def make_lag_features(strain): print('in dataframe:', strain.shape) print("headers:", strain.columns) lags = [7, 28] lag_cols = ['lag_{}'.format(lag)for lag in lags ] for lag, lag_col in zip(lags, lag_cols): strain[lag_col] = strain[['item_id', 'sales']].groupby('item_id')['sales'].shift(lag) print('lag sales done...
model = xgb.train(params, d_train, nrounds, watchlist, early_stopping_rounds=600, maximize=True, verbose_eval=10 )
Titanic - Machine Learning from Disaster
11,609,919
%%time sales_train_evaluation = load_data()<feature_engineering>
leaks = { 897:1, 899:1, 930:1, 932:1, 949:1, 987:1, 995:1, 998:1, 999:1, 1016:1, 1047:1, 1083:1, 1097:1, 1099:1, 1103:1, 1115:1, 1118:1, 1135:1, 1143:1, 1152:1, 1153:1, 1171:1, 1182:1, 1192:1, 1203:1, 1233:1, 1250:1, 1264:1, 1286:1, 935:0, 957:0, 972:0, 988:0, 1004:0, 1006:0, 1011:0, 1105:0, 1130:0, 1138:0, 1173:0, 128...
Titanic - Machine Learning from Disaster
11,609,919
%%time sales_train_evaluation["sale"] =(( sales_train_evaluation['sell_price'] * 100 % 10)< 6 ).astype('int8') make_lag_features(sales_train_evaluation) make_date_features(sales_train_evaluation )<categorify>
sub = pd.DataFrame() sub['PassengerId'] = test['PassengerId'] sub['Survived'] = model.predict(d_test) sub['Survived'] = sub['Survived'].apply(lambda x: 1 if x>0.8 else 0) sub['Survived'] = sub.apply(lambda r: leaks[int(r['PassengerId'])] if int(r['PassengerId'])in leaks else r['Survived'], axis=1) sub.to_csv('sub_ti...
Titanic - Machine Learning from Disaster
9,054,318
before = len(sales_train_evaluation) sales_train_evaluation.dropna(inplace = True) after = len(sales_train_evaluation) print(f"Reduced {(before-after)/before}%" )<train_model>
train_data = pd.read_csv('/kaggle/input/titanic/train.csv') test_data = pd.read_csv('/kaggle/input/titanic/test.csv' )
Titanic - Machine Learning from Disaster
9,054,318
%%time print("Splitting data into train, validation, evaluation set") np.random.seed(777) SIZE = 2_000_000 validation_idx = np.random.choice(sales_train_evaluation.index.values, SIZE, replace = False) train_idx = np.setdiff1d(sales_train_evaluation.index.values, validation_idx) train = sales_train_evaluation.loc[tr...
train_data = train_data.drop(columns=['Name','Cabin']) train_data['family_member'] = train_data['SibSp'] + train_data['Parch'] train_data = train_data.drop(columns=['SibSp', 'Parch'] )
Titanic - Machine Learning from Disaster
9,054,318
categorical_features = [ 'item_id', 'dept_id', 'store_id', 'cat_id', 'state_id', 'event_name_1', 'event_type_1', 'event_name_2', 'event_type_2' ]<create_dataframe>
test_data = test_data.drop(columns=['Name','Cabin']) test_data['family_member'] = test_data['SibSp'] + test_data['Parch'] test_data = test_data.drop(columns=['SibSp', 'Parch'] )
Titanic - Machine Learning from Disaster
9,054,318
train_pool = lgb.Dataset( data=train[train_columns], label=train["sales"], categorical_feature=categorical_features, free_raw_data=False) del train; gc.collect()<create_dataframe>
train_data.fillna(0,inplace=True) test_data.fillna(0,inplace=True )
Titanic - Machine Learning from Disaster
9,054,318
val_pool = lgb.Dataset( data=validation[train_columns], label=validation["sales"], categorical_feature=categorical_features, free_raw_data=False ) del validation; gc.collect()<init_hyperparams>
X = train_data.drop(columns=['Survived']) Y = train_data['Survived'] cate_features_index = np.where(X.dtypes != float)[0]
Titanic - Machine Learning from Disaster
9,054,318
if TEST_RUN: ITERATIONS=1 else: ITERATIONS = 1200 params = { "objective" : "poisson", "metric" : "rmse", "force_row_wise" : True, "learning_rate" : 0.075, "sub_row" : 0.75, "bagging_freq" : 1, "lambda_l2" : 0.1, 'verbosity': 1, 'num_iterations': ITERATIONS, 'num_leaves': 128, "min_data_in_leaf": 100, "early_stopping": ...
from catboost import CatBoostClassifier, cv, Pool
Titanic - Machine Learning from Disaster
9,054,318
%%time model = lgb.train( params, train_pool, valid_sets = val_pool, verbose_eval=20 )<drop_column>
from sklearn.model_selection import train_test_split
Titanic - Machine Learning from Disaster
9,054,318
model.save_model("model_{}.lgb".format(MODEL_VERSION)) del train_pool, val_pool; gc.collect()<data_type_conversions>
from sklearn.model_selection import train_test_split
Titanic - Machine Learning from Disaster
9,054,318
df = load_data(train=False) df["sale"] =(( df['sell_price'] * 100 % 10)< 6 ).astype('int8') make_date_features(df )<feature_engineering>
xtrain,xtest,ytrain,ytest = train_test_split(X,Y,train_size=0.82,random_state=42 )
Titanic - Machine Learning from Disaster
9,054,318
def lag_features_for_day(dt, day): print(type(dt)) lags = [7, 28] lag_cols = [f"lag_{lag}" for lag in lags] for lag, lag_col in zip(lags, lag_cols): dt.loc[dt['date'] == str(day), lag_col] = \ dt.loc[dt['date'] == str(day-timedelta(days=lag)) , 'sales'].values windows = [7, 28] for window in windows: for lag, lag_col i...
clf =CatBoostClassifier(eval_metric='Accuracy',use_best_model=True,random_seed=42 )
Titanic - Machine Learning from Disaster
9,054,318
%%time END_DATE = EVAL_SPLIT PREDICT_DAYS = 28 for f_day in tqdm(range(1,PREDICT_DAYS+1)) : pred_date =(datetime.strptime(END_DATE, '%Y-%m-%d')+ timedelta(days=f_day)).date() print(f"Forecasting day {END_DAY+f_day}, date: {str(pred_date)}") pred_begin_date = pred_date - timedelta(days=BACKWARD_LAG+1) prediction_data ...
clf.fit(xtrain,ytrain,cat_features=cate_features_index,eval_set=(xtest,ytest), early_stopping_rounds=50 )
Titanic - Machine Learning from Disaster
9,054,318
del prediction_data gc.collect()<load_from_csv>
test_id = test_data.PassengerId
Titanic - Machine Learning from Disaster
9,054,318
sales_ = pd.read_csv(os.path.join(KAGGLE_DATA_FOLDER, 'sales_train_evaluation.csv')) submission = pd.read_csv(os.path.join(SUBMISSION_PATH))<feature_engineering>
test_data.isnull().sum()
Titanic - Machine Learning from Disaster
9,054,318
submission_eval = df.loc[df['date'] > END_DATE, ['id', 'day', 'sales']].copy() submission_eval.loc[submission_eval['sales'] < 0, 'sales'] = 0 submission_eval.sort_values('id', inplace=True) submission_eval['day'] = submission_eval['day'].apply(lambda x: 'F{}'.format(x - END_DAY)) print(submission_eval.columns) print(...
prediction = clf.predict(test_data )
Titanic - Machine Learning from Disaster
9,054,318
<save_to_csv><EOS>
df_sub = pd.DataFrame() df_sub['PassengerId'] = test_id df_sub['Survived'] = prediction.astype(np.int) df_sub.to_csv('gender_submission.csv', index=False )
Titanic - Machine Learning from Disaster
7,770,899
<SOS> metric: categorizationaccuracy Kaggle data source: titanic-machine-learning-from-disaster<import_modules>
print("pandas version: {}".format(pd.__version__)) print("NumPy version: {}".format(np.__version__)) print("matplotlib version: {}".format(matplotlib.__version__)) print("seaborn version: {}".format(sns.__version__)) print("scikit-learn version: {}".format(sklearn.__version__)) print("statsmodels version: {}".format(st...
Titanic - Machine Learning from Disaster
7,770,899
import numpy as np import pandas as pd import random import torch import torch.nn as nn import torch.nn.functional as F from torch.nn import Linear, LayerNorm, ReLU, Dropout from sklearn.model_selection import StratifiedKFold from tqdm import tqdm import os import copy from sklearn.cluster import KMeans from sklearn.mo...
from sklearn.preprocessing import OneHotEncoder, LabelEncoder from sklearn import feature_selection from sklearn import model_selection from sklearn import metrics import matplotlib as mpl import matplotlib.pyplot as plt import matplotlib.pylab as pylab import seaborn as sns
Titanic - Machine Learning from Disaster
7,770,899
def Get_nowtime(fmat='%Y-%m-%d %H:%M:%S'): return datetime.datetime.strftime(datetime.datetime.now() ,fmat) def Metric(target,pred): metric = 0 for i in range(target.shape[-1]): metric +=(np.sqrt(np.mean(( target[:,:,i]-pred[:,:,i])**2)) /target.shape[-1]) return metric def Write_log(logFile,text,isPrint=True): if is...
data = pd.read_csv('.. /input/titanic/train.csv') data_val = pd.read_csv('.. /input/titanic/test.csv') data1 = data.copy(deep = True) data_cleaner = [data1, data_val]
Titanic - Machine Learning from Disaster
7,770,899
token2int = {x:i for i, x in enumerate('().ACGUBEHIMSX')} pred_cols = ['reactivity', 'deg_Mg_pH10', 'deg_pH10', 'deg_Mg_50C', 'deg_50C'] def mcrmse(y_actual, y_pred, weight=None, num_scored=5): score = 0 for i in range(5): if weight is not None: score += torch.sqrt(torch.mean(( y_actual[:,:,i]-y_pred[:,:,i])**2*weight)...
print(data1.isnull().sum()) print("-"*10) print(data_val.isnull().sum() )
Titanic - Machine Learning from Disaster
7,770,899
train = pd.read_json('.. /input/stanford-covid-vaccine/train.json', lines=True) test = pd.read_json('.. /input/stanford-covid-vaccine/test.json', lines=True) def read_bpps_sum(df): bpps_arr = [] for mol_id in df.id.to_list() : bpps_arr.append(np.load(f".. /input/stanford-covid-vaccine/bpps/{mol_id}.npy" ).max(axis=1)...
for dataset in data_cleaner: dataset['Age'].fillna(dataset['Age'].median() , inplace = True) dataset['Embarked'].fillna(dataset['Embarked'].mode() [0], inplace = True) dataset['Fare'].fillna(dataset['Fare'].median() , inplace = True) dataset.drop('Cabin', axis=1, inplace=True )
Titanic - Machine Learning from Disaster
7,770,899
kmeans_model = KMeans(n_clusters=200, random_state=110 ).fit(preprocess_inputs(train)[:,:,0]) train['cluster_id'] = kmeans_model.labels_ <save_to_csv>
print(data1.isnull().sum()) print("-"*10) print(data_val.isnull().sum() )
Titanic - Machine Learning from Disaster
7,770,899
oof,sub = train_and_predict() oof.to_csv('./oof.csv',index=False) sub.to_csv('./submission.csv',index=False )<set_options>
varlist = ['Sex'] def binary_map(x): return x.map({'male': 1, "female": 0}) for dataset in data_cleaner: dataset[varlist] = dataset[varlist].apply(binary_map )
Titanic - Machine Learning from Disaster
7,770,899
os.environ['CUDA_VISIBLE_DEVICES'] = '0' def allocate_gpu_memory(gpu_number=0): physical_devices = tf.config.experimental.list_physical_devices('GPU') if physical_devices: try: print("Found {} GPU(s)".format(len(physical_devices))) tf.config.set_visible_devices(physical_devices[gpu_number], 'GPU') tf.config.experime...
dummy1 = pd.get_dummies(data1['Embarked'], prefix='Embarked', drop_first=True) data1 = pd.concat([data1, dummy1], axis=1 )
Titanic - Machine Learning from Disaster
7,770,899
def gru_layer(hidden_dim, dropout): return L.Bidirectional(L.GRU(hidden_dim, dropout=dropout, return_sequences=True, kernel_initializer = 'orthogonal')) def lstm_layer(hidden_dim, dropout): return L.Bidirectional(L.LSTM(hidden_dim, dropout=dropout, return_sequences=True, kernel_initializer = 'orthogonal')) def build_mo...
dummy1 = pd.get_dummies(data_val['Embarked'], prefix='Embarked', drop_first=True) data_val = pd.concat([data_val, dummy1], axis=1 )
Titanic - Machine Learning from Disaster
7,770,899
token2int = {x:i for i, x in enumerate('().ACGUBEHIMSX')} pred_cols = ['reactivity', 'deg_Mg_pH10', 'deg_pH10', 'deg_Mg_50C', 'deg_50C'] def preprocess_inputs(df, cols=['sequence', 'structure', 'predicted_loop_type']): base_fea = np.transpose( np.array( df[cols] .applymap(lambda seq: [token2int[x] for x in seq]) .va...
dummy1 = pd.get_dummies(data1['Pclass'], prefix='Pclass', drop_first=True) data1 = pd.concat([data1, dummy1], axis=1 )
Titanic - Machine Learning from Disaster
7,770,899
train = pd.read_json('.. /input/stanford-covid-vaccine/train.json', lines=True) test = pd.read_json('.. /input/stanford-covid-vaccine/test.json', lines=True )<load_pretrained>
dummy1 = pd.get_dummies(data_val['Pclass'], prefix='Pclass', drop_first=True) data_val = pd.concat([data_val, dummy1], axis=1 )
Titanic - Machine Learning from Disaster
7,770,899
def read_bpps_sum(df): bpps_arr = [] for mol_id in df.id.to_list() : bpps_arr.append(np.load(f".. /input/stanford-covid-vaccine/bpps/{mol_id}.npy" ).max(axis=1)) return bpps_arr def read_bpps_max(df): bpps_arr = [] for mol_id in df.id.to_list() : bpps_arr.append(np.load(f".. /input/stanford-covid-vaccine/bpps/{mol_id}....
dummy1 = pd.get_dummies(data1['Sex'], prefix='Male', drop_first=True) data1 = pd.concat([data1, dummy1], axis=1 )
Titanic - Machine Learning from Disaster
7,770,899
kmeans_model = KMeans(n_clusters=200, random_state=110 ).fit(preprocess_inputs(train)[:,:,0]) train['cluster_id'] = kmeans_model.labels_<load_from_csv>
dummy1 = pd.get_dummies(data_val['Sex'], prefix='Male', drop_first=True) data_val = pd.concat([data_val, dummy1], axis=1 )
Titanic - Machine Learning from Disaster
7,770,899
aug_df = pd.read_csv(aug_data) display(aug_df.head() )<merge>
data1['FamilySize'] = data1['SibSp'] + data1['Parch'] + 1 data1.head(2 )
Titanic - Machine Learning from Disaster
7,770,899
def aug_data(df): target_df = df.copy() new_df = aug_df[aug_df['id'].isin(target_df['id'])] del target_df['structure'] del target_df['predicted_loop_type'] new_df = new_df.merge(target_df, on=['id','sequence'], how='left') df['cnt'] = df['id'].map(new_df[['id','cnt']].set_index('id' ).to_dict() ['cnt']) df['log_gamma...
data_val['FamilySize'] = data_val['SibSp'] + data_val['Parch'] + 1 data_val.head(2 )
Titanic - Machine Learning from Disaster
7,770,899
if debug: train = train[:200] test = test[:200]<split>
data1= data1.rename(columns={ 'Male_1' : 'Male'}) data_val= data_val.rename(columns={ 'Male_1' : 'Male'} )
Titanic - Machine Learning from Disaster
7,770,899
def train_and_predict(type = 0, FOLD_N = 5): gkf = GroupKFold(n_splits=FOLD_N) public_df = test.query("seq_length == 107" ).copy() private_df = test.query("seq_length == 130" ).copy() public_inputs = preprocess_inputs(public_df) private_inputs = preprocess_inputs(private_df) holdouts = [] holdout_preds = [] for cv,(...
drop_column = ['PassengerId', 'Pclass', 'Name', 'Sex', 'Ticket', 'Fare', 'Embarked'] data1.drop(drop_column, axis=1, inplace = True )
Titanic - Machine Learning from Disaster
7,770,899
val_df, val_preds, test_df, test_preds = [], [], [], [] if debug: nmodel = 1 else: nmodel = 4 for i in range(nmodel): holdouts, holdout_preds, public_df, public_preds, private_df, private_preds = train_and_predict(i) val_df += holdouts val_preds += holdout_preds test_df.append(public_df) test_df.append(private_df) t...
from sklearn.model_selection import train_test_split
Titanic - Machine Learning from Disaster
7,770,899
preds_ls = [] for df, preds in zip(test_df, test_preds): for i, uid in enumerate(df.id): single_pred = preds[i] single_df = pd.DataFrame(single_pred, columns=pred_cols) single_df['id_seqpos'] = [f'{uid}_{x}' for x in range(single_df.shape[0])] preds_ls.append(single_df) preds_df = pd.concat(preds_ls ).groupby('id_seq...
from sklearn.model_selection import train_test_split
Titanic - Machine Learning from Disaster
7,770,899
submission = preds_df[['id_seqpos', 'reactivity', 'deg_Mg_pH10', 'deg_pH10', 'deg_Mg_50C', 'deg_50C']] submission.to_csv(f'submission.csv', index=False) print(f'wrote to submission.csv' )<load_from_disk>
X = data1.drop(['Survived'], axis=1) X.head()
Titanic - Machine Learning from Disaster
7,770,899
def print_mse(prd): val = pd.read_json('.. /input/stanford-covid-vaccine/train.json', lines=True) val_data = [] for mol_id in val['id'].unique() : sample_data = val.loc[val['id'] == mol_id] sample_seq_length = sample_data.seq_length.values[0] for i in range(68): sample_dict = { 'id_seqpos' : sample_data['id'].values[0...
y = data1['Survived'] y.head()
Titanic - Machine Learning from Disaster
7,770,899
print_mse(holdouts_df )<compute_test_metric>
X_train, X_test, y_train, y_test = train_test_split(X, y, train_size=0.7, test_size=0.3, random_state=100 )
Titanic - Machine Learning from Disaster
7,770,899
print_mse(holdouts_df[holdouts_df.SN_filter == 1] )<import_modules>
survived =(sum(data1['Survived'])/len(data1['Survived'].index)) *100 survived
Titanic - Machine Learning from Disaster
7,770,899
import pandas as pd import numpy as np<import_modules>
logreg = LogisticRegression()
Titanic - Machine Learning from Disaster
7,770,899
import pandas as pd import numpy as np<load_from_csv>
rfe = RFE(logreg, 15) rfe = rfe.fit(X_train, y_train )
Titanic - Machine Learning from Disaster
7,770,899
df1 = pd.read_csv('/kaggle/input/gru-lstm-mix-with-custom-loss-tunning/ensemble_final.csv') df2 = pd.read_csv('/kaggle/input/mvan-covid-mrna-vaccine-analysis-notebook-268/submission.csv') df3 = pd.read_csv('/kaggle/input/gru-lstm-mix-with-custom-loss/ensemble_final.csv' )<prepare_output>
rfe.support_
Titanic - Machine Learning from Disaster