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def compute_spearmanr(trues, preds): rhos = [] for col_trues, col_pred in zip(trues.T, preds.T): rhos.append(spearmanr(col_trues, col_pred + np.random.normal(0, 1e-7, col_pred.shape[0])).correlation) return np.mean(rhos) <choose_model_class>
grid.best_score_
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def train_bert_model(input_units,output_units): input_word_ids = tf.keras.layers.Input(( input_units,), dtype=tf.int32, name='input_word_ids') input_masks = tf.keras.layers.Input(( input_units,), dtype=tf.int32, name='input_masks') input_segments = tf.keras.layers.Input(( input_units,), dtype=tf.int32, name='input_se...
grid.best_params_
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<define_variables>
grid.score(X_test, y_test )
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test_predictions = [] test_predictions.append(test_preds) final_predictions = np.mean(test_predictions, axis=0) final_predictions.shape<save_to_csv>
lg = grid.best_estimator_
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submission.iloc[:,1:] = final_predictions submission.to_csv('submission.csv', index=False) submission.head()<load_from_csv>
lg.fit(train_set[features_], train_set[target] )
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<define_variables>
pred = lg.predict(test_set[features_] )
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krig.seed_everything()<set_options>
df_pred = pd.concat([raw_test["PassengerId"], pd.Series(pred, name="Survived")], axis=1 )
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pd.set_option('use_inf_as_na', True) pd.set_option('display.max_columns', 999) pd.set_option('display.max_rows', 999 )<define_variables>
df_pred['Survived'] = df_pred.Survived.astype(int) df_pred.head()
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IS_KAGGLE = True QUESTION_MODEL_NAME = 'question_bert_base_uncased_20200210_191831' ANSWER_MODEL_NAME = 'answer_bert_base_uncased_20200210_202316' MAX_SEQUENCE_LENGTH = 512 STRIDE = 50 WINDOW_LENGTH = 100 QUESTION_LABELS = [ 'question_asker_intent_understanding', 'question_body_critical', 'question_conversational', 'qu...
df_pred.to_csv("out.csv", index=False )
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corrs = pd.read_csv(f'{BASE_DIR}/{QUESTION_MODEL_NAME}/corrs.csv') print(f'q mean(corr)={corrs["corr"].mean() :.4f}') corrs.head(len(QUESTION_LABELS))<load_from_csv>
import pandas as pd import numpy as np import matplotlib.pyplot as plt from sklearn.model_selection import train_test_split from sklearn.preprocessing import StandardScaler from sklearn.linear_model import LogisticRegression from sklearn.metrics import accuracy_score from sklearn.impute import SimpleImputer from sklear...
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corrs = pd.read_csv(f'{BASE_DIR}/{ANSWER_MODEL_NAME}/corrs.csv') print(f'a mean(corr)={corrs["corr"].mean() :.4f}') corrs.head(len(ANSWER_LABELS))<load_from_csv>
train=pd.read_csv('/kaggle/input/titanic/train.csv') test=pd.read_csv('/kaggle/input/titanic/test.csv') train.head()
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hist = pd.read_csv(f'{BASE_DIR}/{QUESTION_MODEL_NAME}/history.csv') hist.head(len(hist))<load_from_csv>
test_id=test['PassengerId'] df=pd.concat([train,test],axis=0) df.head() print(df.info() )
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hist = pd.read_csv(f'{BASE_DIR}/{ANSWER_MODEL_NAME}/history.csv') hist.head(len(hist))<load_from_csv>
df=df.drop(['PassengerId','Cabin','Ticket'],axis=1) df['Age'].fillna(df['Age'].median() ,inplace=True) df['Fare'].fillna(df['Fare'].median() ,inplace=True) df['Embarked'].fillna(df['Embarked'].mode() [0],inplace=True )
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%%time test = pd.read_csv('.. /input/google-quest-challenge/test.csv') test.info()<load_pretrained>
df['Familysize']=df['SibSp']+df['Parch'] df['IsAlone']=1 df['IsAlone'].loc[df['Familysize']>=1]=0 df['FareBin']=pd.cut(df['Fare'],4) df['AgeBin']=pd.cut(df['Age'].astype(int),5) df['Title']=df['Name'].str.split(",",expand=True)[1].str.split('.',expand=True)[0] min=10 title_names = df['Title'].value_counts() < min df[...
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%%time tokenizer = BertTokenizer.from_pretrained(f'{BASE_DIR}/{QUESTION_MODEL_NAME}') ds = gqc.Dataset(key_column='qa_id') ds.preprocess(test, tokenizer, first_seq_columns=QUESTION_FIRST_SEQUENCE, second_seq_columns=QUESTION_SECOND_SEQUENCE, max_sequence_length=MAX_SEQUENCE_LENGTH, window_length=WINDOW_LENGTH, stride...
label=LabelEncoder() df['Sex_Code']=label.fit_transform(df['Sex']) df['Embarked_Code']=label.fit_transform(df['Embarked']) df['Title_Code']=label.fit_transform(df['Title']) df['FareBin_Code']=label.fit_transform(df['FareBin']) df['Age_Code']=label.fit_transform(df['AgeBin']) df.head()
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%%time y_pred = model.predict(x_test) print(f'y_pred.shape={np.shape(y_pred)}' )<create_dataframe>
df=df.drop(['Name'],axis=1) df=pd.get_dummies(df) df.head()
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q = pd.DataFrame(y_pred, columns=QUESTION_LABELS) q['qa_id'] = ds.df['qa_id'].values q = q.groupby(['qa_id'], as_index=False)[QUESTION_LABELS].median() q.info()<load_pretrained>
cX=ctrain.drop(['Survived'],axis=1) cy=ctrain[['Survived']]
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%%time tokenizer = BertTokenizer.from_pretrained(f'{BASE_DIR}/{ANSWER_MODEL_NAME}') ds = gqc.Dataset(key_column='qa_id') ds.preprocess(test, tokenizer, first_seq_columns=ANSWER_FIRST_SEQUENCE, second_seq_columns=ANSWER_SECOND_SEQUENCE, max_sequence_length=MAX_SEQUENCE_LENGTH, window_length=WINDOW_LENGTH, stride=STRID...
cX_train, cX_test, cy_train, cy_test = train_test_split(cX,cy,stratify=cy,test_size=0.2,random_state=1 )
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%%time y_pred = model.predict(x_test) print(f'y_pred.shape={np.shape(y_pred)}' )<create_dataframe>
lcv=LassoCV() lcv.fit(cX_train,cy_train) lcv_mask=lcv.coef_!=0 print(sum(lcv_mask))
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a = pd.DataFrame(y_pred, columns=ANSWER_LABELS) a['qa_id'] = ds.df['qa_id'].values a = a.groupby(['qa_id'], as_index=False)[ANSWER_LABELS].median() a.info()<concatenate>
rfe_rf=RFE(estimator=RandomForestClassifier() ,n_features_to_select=12,verbose=1) rfe_rf.fit(cX_train,cy_train) rf_mask=rfe_rf.support_
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qa = pd.concat([q, a], axis=1) qa.head()<load_from_csv>
rfe_gb=RFE(estimator=GradientBoostingClassifier() ,n_features_to_select=12,verbose=1) rfe_gb.fit(cX_train,cy_train) gb_mask=rfe_gb.support_
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sub = pd.read_csv('.. /input/google-quest-challenge/sample_submission.csv') sub.iloc[:, 1:] = qa[QUESTION_LABELS + ANSWER_LABELS].values gqc.check_submission(sub, shape=(476, 31), exclude={'qa_id'}) sub.head()<save_to_csv>
votes=np.sum([lcv_mask,rf_mask,gb_mask],axis=0) print(votes) mask=votes>1
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sub.to_csv('submission.csv', index=False )<save_to_csv>
lr=LogisticRegression() lr.fit(ccX_train,cy_train) y_pred=lr.predict(ccX_test) print(accuracy_score(cy_test,y_pred))
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sub.to_csv('submission.csv', index=False )<install_modules>
steps=[('scaler',StandardScaler()),('lr',LogisticRegression())] lr_pipe=Pipeline(steps) lr_pipe.fit(ccX_train,cy_train) y_pred=lr_pipe.predict(ccX_test) print(accuracy_score(cy_test,y_pred))
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!pip list<import_modules>
knn=KNeighborsClassifier(n_neighbors=9) knn.fit(cX_train,cy_train) y_pred=knn.predict(cX_test) print(accuracy_score(cy_test,y_pred))
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pyLDAvis.enable_notebook() warnings.filterwarnings('ignore' )<load_from_csv>
param={'knn__n_neighbors':np.arange(1,20)} steps=[('scaler',StandardScaler()),('knn',KNeighborsClassifier())] knn_pipe=Pipeline(steps) grid_knn=GridSearchCV(estimator=knn_pipe,param_grid=param,cv=10,n_jobs=-1) grid_knn.fit(ccX_train,cy_train) y_pred=grid_knn.predict(ccX_test) print(accuracy_score(cy_test,y_pred)) p...
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sample = pd.read_csv('/kaggle/input/google-quest-challenge/sample_submission.csv') sample.head(3 )<load_from_csv>
param={'max_depth':np.arange(3,8),'min_samples_leaf':[0.04,0.06,0.08],'max_features':[0.2,0.4,0.6,0.8]} dt=DecisionTreeClassifier(random_state=12) grid_dt=GridSearchCV(estimator=dt,param_grid=param,cv=10,n_jobs=-1) grid_dt.fit(ccX_train,cy_train) y_pred=grid_dt.predict(ccX_test) print(accuracy_score(cy_test,y_pred)...
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train = pd.read_csv('/kaggle/input/google-quest-challenge/train.csv') train.head(3 )<load_from_csv>
param={'n_estimators':[200],'max_depth':np.arange(3,6),'min_samples_leaf':[0.04,0.06,0.08],'max_features':[0.2,0.4,0.6,0.8]} rf=RandomForestClassifier(random_state=12) grid_rf=GridSearchCV(estimator=rf,param_grid=param,cv=10,n_jobs=-1) grid_rf.fit(ccX_train,cy_train) y_pred=grid_rf.predict(ccX_test) print(accuracy_...
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test = pd.read_csv('/kaggle/input/google-quest-challenge/test.csv') test.head(3 )<define_variables>
xg_cl=xgb.XGBClassifier(objective='binary:logistic',n_estimators=4,seed=123) xg_cl.fit(ccX_train,cy_train) y_pred=xg_cl.predict(ccX_test) print(accuracy_score(cy_test,y_pred))
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targets = [ 'question_asker_intent_understanding', 'question_body_critical', 'question_conversational', 'question_expect_short_answer', 'question_fact_seeking', 'question_has_commonly_accepted_answer', 'question_interestingness_others', 'question_interestingness_self', 'question_multi_intent', 'question_not_really_a_qu...
xg=xgb.XGBClassifier(objective='reg:logistic',seed=123) params={'n_estimators':[100,200],'max_depth':np.arange(2,6),'alpha':[0.01,0.1,1,10]} grid_xg=GridSearchCV(estimator=xg,param_grid=params,cv=10,n_jobs=-1) grid_xg.fit(ccX_train,cy_train) y_pred=grid_xg.predict(ccX_test) print(accuracy_score(cy_test,y_pred)) pri...
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stopwords=stopwords.words('english') train['que_stopwords']=train['question_body'].apply(lambda x : [x for x in x.split() if x in stopwords]) train['ans_stopwords']=train['answer'].apply(lambda x: [x for x in x.split() if x in stopwords] )<count_unique_values>
dt=DecisionTreeClassifier(max_depth=1,random_state=1) ada=AdaBoostClassifier(base_estimator=dt,n_estimators=300,learning_rate=0.05) ada.fit(ccX_train,cy_train) y_pred=ada.predict(ccX_test) print(accuracy_score(cy_test,y_pred))
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def common_ngrams(col,common=10): corpus=[] for question in train[col].values: words=[str(x[0]+' '+x[1])for x in ngrams(question.split() ,2)] corpus.append(words) flatten=[x for one in corpus for x in one] counter=Counter(flatten) most_common=counter.most_common(common) string,value=zip(*(most_common)) return string...
grad=GradientBoostingClassifier(n_estimators=500,learning_rate=0.01) grad.fit(ccX_train,cy_train) y_pred=grad.predict(ccX_test) print(accuracy_score(cy_test,y_pred))
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np.set_printoptions(suppress=True )<load_from_csv>
svc=SVC(C=100,random_state=12) svc.fit(ccX_train,cy_train) y_pred=svc.predict(ccX_test) print(accuracy_score(cy_test,y_pred))
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PATH = '.. /input/google-quest-challenge/' BERT_PATH = '.. /input/bert-base-from-tfhub/bert_en_uncased_L-12_H-768_A-12' tokenizer = FullTokenizer(BERT_PATH+'/assets/vocab.txt', True) MAX_SEQUENCE_LENGTH = 512 df_train = pd.read_csv(PATH+'train.csv') df_test = pd.read_csv(PATH+'test.csv') df_sub = pd.read_csv(PATH+'s...
lr=LogisticRegression(random_state=12) knn=KNeighborsClassifier() dt=DecisionTreeClassifier(random_state=12) classifiers=[('Logistic',lr_pipe), ('knn',grid_knn), ('dt',grid_dt), ('gradient',grad), ('RF',grid_rf), ('Ada',ada), ('XGb',xg_cl), ('XgbGrid',grid_xg)] vc=VotingClassifier(estimators=classifiers) vc.f...
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def _get_masks(tokens, max_seq_length): if len(tokens)>max_seq_length: raise IndexError("Token length more than max seq length!") return [1]*len(tokens)+ [0] *(max_seq_length - len(tokens)) def _get_segments(tokens, max_seq_length): if len(tokens)>max_seq_length: raise IndexError("Token length more than max seq le...
test_1=cctest test_2=pd.DataFrame(test_1,columns=test_1.columns) ans=vc.predict(test_2) sub=pd.DataFrame({ 'PassengerId':test_id.astype(int), 'Survived':ans.astype(int) }) print(sub.head()) sub.to_csv('submissions.csv',index=False )
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def compute_spearmanr(trues, preds): rhos = [] for col_trues, col_pred in zip(trues.T, preds.T): rhos.append( spearmanr(col_trues, col_pred + np.random.normal(0, 1e-7, col_pred.shape[0])).correlation) return np.nanmean(rhos) class CustomCallback(tf.keras.callbacks.Callback): def __init__(self, valid_data, test_data,...
from sklearn.linear_model import LogisticRegression from sklearn.ensemble import RandomForestClassifier from sklearn.model_selection import GridSearchCV
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test_inputs = compute_input_arrays(df_test, input_categories, tokenizer, MAX_SEQUENCE_LENGTH )<load_pretrained>
train = pd.read_csv('.. /input/titanic/train.csv') test = pd.read_csv('.. /input/titanic/test.csv') y = train.Survived passengerid = test.PassengerId titanic = train.append(test, ignore_index = True )
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models = [] for i in range(1,4): model_path = f'.. /input/bertuned-f{i}/bertuned_f{i}.h5' model = bert_model() model.load_weights(model_path) models.append(model) <load_pretrained>
train_index = len(train) test_index = len(titanic)- len(test )
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model_path = f'.. /input/bertf1e15/Full-0.h5' model = bert_model() model.load_weights(model_path) models.append(model )<load_pretrained>
titanic['Title'] = titanic.Name.apply(lambda x: x.split(',')[1].split('.')[0].strip() )
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for i in range(3,5): model_path = f'.. /input/using-pretrained-kernel/using_pretrained_kernel/arj_bert-{0}.h5' model = bert_model() model.load_weights(model_path) models.append(model )<load_pretrained>
titanic.Title.value_counts()
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for i in range(3-5): model_path = f'.. /input/bert-pretrained-models/Pretrained_bert_models/bert-{0}.h5' model = bert_model() model.load_weights(model_path) models.append(model )<load_pretrained>
normalized_title = { 'Mr':"Mr", 'Mrs': "Mrs", 'Ms': "Mrs", 'Mme':"Mrs", 'Mlle':"Miss", 'Miss':"Miss", 'Master':"Master", 'Dr':"Officer", 'Rev':"Officer", 'Col':"Officer", 'Capt':"Officer", 'Major':"Officer", 'Lady':"Royalty", 'Sir':"Royalty", 'the Countess':"Royalty", 'Dona':"Royalty", 'Don':"Royalty", 'Jonkheer':"Roya...
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for i in range(2): model_path = f'.. /input/bertmodelpretrained/bert-{i}.h5' model = bert_model() model.load_weights(model_path) models.append(model )<load_pretrained>
titanic.Title = titanic.Title.map(normalized_title )
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for i in range(2,5): model_path = f'.. /input/pretrained-bert/bert-{i}.h5' model = bert_model() model.load_weights(model_path) models.append(model )<load_pretrained>
print(titanic.Title.value_counts() )
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for i in range(3,6): model_path = f'.. /input/bert-base-tf2-0-training/bert-{i}.h5' model = bert_model() model.load_weights(model_path) models.append(model )<define_variables>
titanic.Age = grouped.Age.apply(lambda x: x.fillna(x.median())) titanic.isnull().sum()
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test_predictions = []<predict_on_test>
titanic.Fare = titanic.Fare.fillna(titanic.Fare.mean()) titanic.Cabin = titanic.Cabin.fillna('U') most_Embarked = titanic.Embarked.value_counts().index[0] titanic.Embarked = titanic.Embarked.fillna(most_Embarked )
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for model in models: test_predictions.append(model.predict(test_inputs, batch_size=8))<prepare_output>
titanic.isnull().sum()
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final_predictions = np.mean(test_predictions, axis=0 )<load_pretrained>
titanic['FamilySize'] = titanic['SibSp'] + titanic['Parch'] + 1
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n=df_test['url'].apply(lambda x:(( 'ell.stackexchange.com' in x)or('english.stackexchange.com' in x)) ).tolist() spelling=[] for x in n: if x: spelling.append(0.5) else: spelling.append(0.) <save_to_csv>
titanic['Cabin'].value_counts()
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df_sub['question_type_spelling']=spelling df_sub.iloc[:, 1:] = final_predictions df_sub.to_csv('submission.csv', index=False )<set_options>
titanic.Cabin = titanic.Cabin.map(lambda x: x[0]) titanic.Cabin.head()
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def tqdm(it, *args, **kwargs): return it def seed_everything(seed=1234): random.seed(seed) os.environ['PYTHONHASHSEED'] = str(seed) np.random.seed(seed) torch.manual_seed(seed) torch.cuda.manual_seed(seed) torch.backends.cudnn.deterministic = True seed_everything() np.set_printoptions(suppress=True) print(tf.__ve...
titanic.Sex = titanic.Sex.map({"male":0,"female":1}) title_dummies = pd.get_dummies(titanic.Title , prefix = "Title") cabin_dummies = pd.get_dummies(titanic.Cabin , prefix = "Cabin") pclass_dummies = pd.get_dummies(titanic.Pclass , prefix ="Pclass") embarked_dummies = pd.get_dummies(titanic.Embarked , prefix = "Emb...
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PATH = '.. /input/google-quest-challenge/' BERT_PATH = '.. /input/bertpretrained/uncased_L-12_H-768_A-12/uncased_L-12_H-768_A-12/' tokenizer = BertTokenizer.from_pretrained(BERT_PATH) MAX_SEQUENCE_LENGTH = 512 df_train = pd.read_csv(PATH+'train.csv') df_test = pd.read_csv(PATH+'test.csv') sub = pd.read_csv(PATH+'sam...
titanic_dummies = pd.concat([titanic , title_dummies,cabin_dummies, pclass_dummies,embarked_dummies],axis = 1 )
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df_train.question_body = df_train.question_body.apply(html.unescape) df_train.question_title = df_train.question_title.apply(html.unescape) df_train.answer = df_train.answer.apply(html.unescape) df_test.question_body = df_test.question_body.apply(html.unescape) df_test.question_title = df_test.question_title.apply(...
titanic_dummies.drop(['Pclass', 'Title', 'Cabin', 'Embarked', 'Name', 'Ticket'],axis = 1,inplace = True )
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def _preprocess_text(s: str)-> str: return s def _trim_input(question_tokens: List[str], answer_tokens: List[str], max_sequence_length: int, q_max_len: int, a_max_len: int)-> Tuple[List[str], List[str]]: q_len = len(question_tokens) a_len = len(answer_tokens) if q_len + a_len + 3 > max_sequence_length: if a_max_len <...
train_x = titanic_dummies[:train_index] test_x = titanic_dummies[train_index:]
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def compute_input_arrays(df, question_only=False): input_ids, input_token_type_ids, input_attention_masks = [], [], [] for title, body, answer in zip(df["question_title"].values, df["question_body"].values, df["answer"].values): ids, type_ids, mask = _convert_to_transformer_inputs(title, body, answer, tokenizer, questi...
train_x.Survived = train_x.Survived.astype(int )
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class Model(torch.nn.Module): def __init__(self): super().__init__() config = BertConfig.from_json_file(BERT_PATH + "/bert_config.json") config.output_hidden_states = True self.bert = BertForPreTraining.from_pretrained(BERT_PATH + "/bert_model.ckpt.index", from_tf=True, config=config ).bert self.cls_token_head = nn.Se...
X = train_x.drop('Survived', axis=1 ).values y = train_x.Survived.values
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outputs = torch.tensor(compute_output_arrays(df_train), dtype=torch.float) inputs = [torch.tensor(x, dtype=torch.long)for x in compute_input_arrays(df_train)] question_only_inputs = [torch.tensor(x, dtype=torch.long)for x in compute_input_arrays(df_train, question_only=True)] test_inputs = [torch.tensor(x, dtype=torch...
X_test = test_x.drop('Survived', axis=1 ).values
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device = torch.device("cuda" if torch.cuda.is_available() else "cpu") print(device )<find_best_params>
label = train_x.Survived train_X , val_X , train_Y , val_Y = train_test_split(train_x , label,test_size = 0.2,shuffle = True )
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for n, _ in Model().named_parameters() : print(n )<data_type_conversions>
dtrain_X = train_X.drop('Survived',axis = 1 )
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LABEL_WEIGHTS = torch.tensor(1.0 / df_train[output_categories].std().values, dtype=torch.float32 ).to(device) LABEL_WEIGHTS = LABEL_WEIGHTS / LABEL_WEIGHTS.sum() * 30 for name, weight in zip(output_categories, LABEL_WEIGHTS.cpu().numpy()): print(name, "\t", weight )<define_search_space>
dval_X = val_X.drop('Survived',axis = 1 )
Titanic - Machine Learning from Disaster
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BEST_BINS = [400, 400, 15, 100, 400, 7, 1600, 100, 100, 400, 100, 9, 8, 50, 9, 8, 15, 400, 400, 5, 400, 400, 800, 50, 200, 1600, 20, 200, 1600, 1600] def binning_output(preds, n_bins=BEST_BINS): preds = preds.copy() for i in range(preds.shape[-1]): n = n_bins[i] binned =(preds[:, i] * n ).astype(np.int32 ).astype(np.fl...
params = dict( max_depth = [n for n in range(9,15)], min_samples_split = [n for n in range(4, 11)], min_samples_leaf = [n for n in range(2, 5)], n_estimators = [n for n in range(10, 60, 10)], )
Titanic - Machine Learning from Disaster
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class Fold(object): def __init__(self, n_splits=5, shuffle=True, random_state=71): self.n_splits = n_splits self.shuffle = shuffle self.random_state = random_state def get_groupkfold(self, train, group_name): group = train[group_name] unique_group = group.unique() kf = KFold( n_splits=self.n_splits, shuffle=self.shuff...
model_forest = RandomForestClassifier()
Titanic - Machine Learning from Disaster
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gkf = Fold(n_splits=3, shuffle=True, random_state=71) fold_ids = gkf.get_groupkfold(df_train, group_name="url") for train_idx, valid_idx in fold_ids: print(( df_train.loc[train_idx, "question_type_spelling"] > 0 ).sum()) print(( df_train.loc[valid_idx, "question_type_spelling"] > 0 ).sum() )<create_dataframe>
forest_gs = GridSearchCV(param_grid=params, estimator=model_forest, cv=5) forest_gs.fit(dtrain_X,train_Y )
Titanic - Machine Learning from Disaster
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histories = [] test_dataset = torch.utils.data.TensorDataset(*test_inputs) q_test_dataset = torch.utils.data.TensorDataset(*test_question_only_inputs) for fold,(train_idx, valid_idx)in enumerate(fold_ids): gc.collect() train_inputs = [inputs[i][train_idx] for i in range(3)] q_train_inputs = [question_only_inputs[i][t...
forest_gs.best_score_
Titanic - Machine Learning from Disaster
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val_preds_list = [] n_epochs = len(histories[0][0]) for epoch in range(n_epochs): val_preds_one_epoch = np.zeros([len(df_train), 30]) for fold,(train_idx, valid_idx)in enumerate(fold_ids): val_pred = histories[fold][0][epoch] val_preds_one_epoch[valid_idx, :] += val_pred val_preds_list.append(val_preds_one_epoch )<de...
forest_gs.best_estimator_
Titanic - Machine Learning from Disaster
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oof_predictions = np.zeros(( n_epochs, len(df_train), len(output_categories)) , dtype=np.float32) for j, name in enumerate(output_categories): for epoch in range(n_epochs): col = "{}_{}".format(epoch, name) oof_predictions[epoch, :, j] = val_preds_list[epoch][:, j] oof_predictions.shape<define_variables>
p = forest_gs.predict(dval_X) print(mean_absolute_error(p,val_Y))
Titanic - Machine Learning from Disaster
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test_preds_list = [] for epoch in range(n_epochs): test_preds_one_epoch = 0 for fold in range(len(fold_ids)) : test_preds = histories[fold][1][epoch] test_preds_one_epoch += test_preds test_preds_one_epoch = test_preds_one_epoch / len(fold_ids) test_preds_list.append(test_preds_one_epoch )<define_variables>
prediction_Random_forest = forest_gs.predict(X_test) prediction_Random_forest
Titanic - Machine Learning from Disaster
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<find_best_model_class><EOS>
output = pd.DataFrame({"PassengerId":passengerid , "Survived" : prediction_Random_forest}) output.to_csv("Submission5.csv",index = False )
Titanic - Machine Learning from Disaster
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<SOS> metric: categorizationaccuracy Kaggle data source: titanic-machine-learning-from-disaster<compute_test_metric>
%matplotlib inline py.init_notebook_mode(connected=True) @contextmanager def timer(title): t0 = time.time() yield print("{} - done in {:.0f}s".format(title, time.time() - t0)) warnings.filterwarnings('ignore' )
Titanic - Machine Learning from Disaster
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def lgb_compute_spearmanr(preds, trues): rhos = spearmanr(trues.get_label() , preds ).correlation return "spearmanr", rhos, True def compute_spearmanr_each_col(trues, preds, n_bins=None): if n_bins: preds = binning_output(preds, n_bins) rhos = spearmanr(trues, preds ).correlation return rhos<train_model>
train = pd.read_csv(".. /input/train.csv") test = pd.read_csv(".. /input/test.csv" )
Titanic - Machine Learning from Disaster
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class LightGBM(Base_Model): def fit(self, x_train, y_train, x_valid, y_valid, config): d_train = lgb.Dataset(x_train, label=y_train) d_valid = lgb.Dataset(x_valid, label=y_valid) lgb_model_params = config["model"]["model_params"] lgb_train_params = config["model"]["train_params"] model = lgb.train( params=lgb_model_...
train['Type'] = 'train' test['Type'] = 'test' data = train.append(test) data.shape
Titanic - Machine Learning from Disaster
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config = { "model": { "name": "lightgbm", "model_params": { "boosting_type": "gbdt", "objective": "rmse", "tree_learner": "serial", "learning_rate": 0.1, "max_depth": 1, "seed": 71, "bagging_seed": 71, "feature_fraction_seed": 71, "drop_seed": 71, "verbose": -1 }, "train_params": { "num_boost_round": 5000, "early_stopp...
data['Title'] = data['Name'] for name_string in data['Name']: data['Title'] = data['Name'].str.extract('([A-Za-z]+)\.', expand=True )
Titanic - Machine Learning from Disaster
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def compute_spearmanr(trues, preds, n_bins=None): rhos = [] if n_bins: preds = binning_output(preds, n_bins) for col_trues, col_pred in zip(trues.T, preds.T): if len(np.unique(col_pred)) == 1: col_pred[np.random.randint(0, len(col_pred)- 1)] = col_pred.max() + 1 rhos.append(spearmanr(col_trues, col_pred ).correlation)...
mapping = {'Mlle': 'Miss', 'Ms': 'Miss', 'Mme': 'Mrs', 'Major': 'Other', 'Col': 'Other', 'Dr' : 'Other', 'Rev' : 'Other', 'Capt': 'Other', 'Jonkheer': 'Royal', 'Sir': 'Royal', 'Lady': 'Royal', 'Don': 'Royal', 'Countess': 'Royal', 'Dona': 'Royal'} data.replace({'Title': mapping}, inplace=True) titles = ['Miss', 'Mr', '...
Titanic - Machine Learning from Disaster
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test_preds_fi = np.concatenate(test_preds_list, axis=1) sub.iloc[:, 1:] = test_preds_fi sub.to_csv('submission.csv', index=False )<install_modules>
for title in titles: age_to_impute = data.groupby('Title')['Age'].median() [titles.index(title)] data.loc[(data['Age'].isnull())&(data['Title'] == title), 'Age'] = age_to_impute
Titanic - Machine Learning from Disaster
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!pip install.. /input/sacremoses/sacremoses-master/ !pip install.. /input/transformers/transformers-master/<define_variables>
data['Family_Size'] = data['Parch'] + data['SibSp'] + 1 data.loc[:,'FsizeD']='Alone' data.loc[(data['Family_Size']>1),'FsizeD']='Small' data.loc[(data['Family_Size']>4),'FsizeD']='Big'
Titanic - Machine Learning from Disaster
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DATA_DIR = '.. /input/google-quest-challenge'<load_from_csv>
data[data["Fare"].isnull() ]
Titanic - Machine Learning from Disaster
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sub = pd.read_csv(f'{DATA_DIR}/sample_submission.csv') sub.head()<load_from_csv>
fa = data[data["Pclass"]==3] data['Fare'].fillna(fa['Fare'].median() , inplace = True )
Titanic - Machine Learning from Disaster
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train = pd.read_csv(f'{DATA_DIR}/train.csv') train.head()<load_from_csv>
data.loc[:,'Child']=1 data.loc[(data['Age']>=18),'Child']=0
Titanic - Machine Learning from Disaster
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test = pd.read_csv(f'{DATA_DIR}/test.csv') test.head()<define_variables>
data['Last_Name'] = data['Name'].apply(lambda x: str.split(x, ",")[0]) DEFAULT_SURVIVAL_VALUE = 0.5 data['Family_Survival'] = DEFAULT_SURVIVAL_VALUE for grp, grp_df in data[['Survived','Name', 'Last_Name', 'Fare', 'Ticket', 'PassengerId', 'SibSp', 'Parch', 'Age', 'Cabin']].groupby(['Last_Name', 'Fare']): if(len(grp_df...
Titanic - Machine Learning from Disaster
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MAX_LEN = 512 SEP_TOKEN_ID = 102 class QuestDataset(torch.utils.data.Dataset): def __init__(self, df, model_type="bert-base-cased", max_len=512, content="Question_Answer", train_mode=True, labeled=True): self.df = df self.train_mode = train_mode self.labeled = labeled self.max_len = max_len self.content = content bert_...
for _, grp_df in data.groupby('Ticket'): if(len(grp_df)!= 1): for ind, row in grp_df.iterrows() : if(row['Family_Survival'] == 0)|(row['Family_Survival']== 0.5): smax = grp_df.drop(ind)['Survived'].max() smin = grp_df.drop(ind)['Survived'].min() passID = row['PassengerId'] if(smax == 1.0): data.loc[data['PassengerId'] ...
Titanic - Machine Learning from Disaster
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test_test_loader()<load_pretrained>
data = data.drop(columns = [ 'Age', 'Cabin', 'Embarked', 'Name', 'Last_Name', 'Parch', 'SibSp', 'Ticket', 'Family_Size', ]) data.head()
Titanic - Machine Learning from Disaster
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test_train_loader()<load_pretrained>
target_col = ["Survived"] id_dataset = ["Type"] cat_cols = data.nunique() [data.nunique() < 12].keys().tolist() cat_cols = [x for x in cat_cols ] num_cols = [x for x in data.columns if x not in cat_cols + target_col + id_dataset] bin_cols = data.nunique() [data.nunique() == 2].keys().tolist() multi_cols = [i for i in c...
Titanic - Machine Learning from Disaster
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class QuestModel(nn.Module): def __init__(self, model_type="xlnet-base-cased", tokenizer=None, n_classes=30, hidden_layers=[-1, -3, -5, -7, -9]): super(QuestModel, self ).__init__() self.model_name = 'QuestModel' self.model_type = model_type self.hidden_layers = hidden_layers if model_type == "bert-base-uncased": bert_...
train = data[data['Type'] == 1] test = data[data['Type'] == 0] train = train.drop(columns = ['Type']) test = test.drop(columns = ['Type'] )
Titanic - Machine Learning from Disaster
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test_model(model_type="bert-base-cased", hidden_layers=[-3, -4, -5, -6, -7] )<load_pretrained>
X = train.drop('Survived', 1) y = train['Survived'] X_test = test X_test = X_test.drop(columns = ['Survived' ] )
Titanic - Machine Learning from Disaster
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def create_bert_base_uncased_models() : models = [] for i in range(10): model = QuestModel(model_type="bert-base-uncased", hidden_layers=[-1, -3, -5, -7, -9]) model.load_state_dict(torch.load(f'.. /input/qabertuncasedaugdiffv2swa/fold_{i}_checkpoint_swa.pth')) model.eval() models.append(model) return models def creat...
random_state = 42 X_train, X_valid, y_train, y_valid = train_test_split(X, y, test_size = 0.2, random_state = random_state )
Titanic - Machine Learning from Disaster
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def predict(models, test_loader): all_scores = [] with torch.no_grad() : for ids, seg_ids in tqdm(test_loader, total=test_loader.num // test_loader.batch_size): ids, seg_ids = ids.cuda() , seg_ids.cuda() scores = [] for model in models: model = model.cuda() outputs = torch.sigmoid(model(ids, seg_ids)).cpu() scores.appe...
fit_params = {"early_stopping_rounds" : 100, "eval_metric" : 'auc', "eval_set" : [(X_train,y_train)], 'eval_names': ['valid'], 'verbose': 0, 'categorical_feature': 'auto'} param_test = {'learning_rate' : [0.01, 0.02, 0.03, 0.04, 0.05, 0.08, 0.1, 0.2, 0.3, 0.4], 'n_estimators' : [100, 200, 300, 400, 500, 600, 800, 1000,...
Titanic - Machine Learning from Disaster
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test_loader, tokenizer = get_test_loader(model_type="roberta-base", content="Question_Answer", batch_size=32 )<predict_on_test>
%%time lgbm_clf = lgbm.LGBMClassifier(**opt_parameters) lgbm_clf.fit(X_train, y_train) y_pred = lgbm_clf.predict(X_valid) y_score = lgbm_clf.predict_proba(X_valid)[:,1] model_performance('lgbm_clf' )
Titanic - Machine Learning from Disaster
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roberta_base_models = create_roberta_base_models(tokenizer) roberta_base_preds = predict(roberta_base_models, test_loader )<set_options>
lgbm_clf = lgbm.LGBMClassifier(**opt_parameters) lgbm_clf.fit(X, y) y_pred = lgbm_clf.predict(X_test )
Titanic - Machine Learning from Disaster
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del roberta_base_models, test_loader torch.cuda.empty_cache() gc.collect()<load_pretrained>
visualizer = DiscriminationThreshold(lgbm_clf) visualizer.fit(X, y) visualizer.poof()
Titanic - Machine Learning from Disaster
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test_loader, _ = get_test_loader(model_type="xlnet-base-cased", batch_size=32 )<predict_on_test>
temp = pd.DataFrame(pd.read_csv(".. /input/test.csv")['PassengerId']) temp['Survived'] = y_pred temp.to_csv(".. /working/submission.csv", index = False )
Titanic - Machine Learning from Disaster
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xlnet_base_cased_models = create_xlnet_base_cased_models() xlnet_base_cased_preds = predict(xlnet_base_cased_models, test_loader )<set_options>
training = pd.read_csv('/kaggle/input/titanic/train.csv') test = pd.read_csv('/kaggle/input/titanic/test.csv') training['train_test'] = 1 test['train_test'] = 0 test['Survived'] = np.NaN all_data = pd.concat([training,test]) %matplotlib inline all_data.columns
Titanic - Machine Learning from Disaster
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del xlnet_base_cased_models, test_loader torch.cuda.empty_cache() gc.collect()<load_pretrained>
df_num = training[['Age','SibSp','Parch','Fare']] df_cat = training[['Survived','Pclass','Sex','Ticket','Cabin','Embarked']]
Titanic - Machine Learning from Disaster
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test_loader, _ = get_test_loader(model_type="xlnet-base-cased", content="Question", batch_size=32 )<predict_on_test>
pd.pivot_table(training, index = 'Survived', values = ['Age','SibSp','Parch','Fare'] )
Titanic - Machine Learning from Disaster
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xlnet_base_cased_question_models = create_xlnet_base_cased_question_models() xlnet_base_cased_question_preds = predict(xlnet_base_cased_question_models, test_loader )<set_options>
print(pd.pivot_table(training, index = 'Survived', columns = 'Pclass', values = 'Ticket' ,aggfunc ='count')) print() print(pd.pivot_table(training, index = 'Survived', columns = 'Sex', values = 'Ticket' ,aggfunc ='count')) print() print(pd.pivot_table(training, index = 'Survived', columns = 'Embarked', values = 'Ticket...
Titanic - Machine Learning from Disaster
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del xlnet_base_cased_question_models, test_loader torch.cuda.empty_cache() gc.collect()<load_pretrained>
df_cat.Cabin training['cabin_multiple'] = training.Cabin.apply(lambda x: 0 if pd.isna(x)else len(x.split(' '))) training['cabin_multiple'].value_counts()
Titanic - Machine Learning from Disaster
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test_loader, _ = get_test_loader(model_type="xlnet-base-cased", content="Answer", batch_size=32 )<predict_on_test>
pd.pivot_table(training, index = 'Survived', columns = 'cabin_multiple', values = 'Ticket' ,aggfunc ='count' )
Titanic - Machine Learning from Disaster
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xlnet_base_cased_answer_models = create_xlnet_base_cased_answer_models() xlnet_base_cased_answer_preds = predict(xlnet_base_cased_answer_models, test_loader )<set_options>
training['cabin_adv'] = training.Cabin.apply(lambda x: str(x)[0])
Titanic - Machine Learning from Disaster
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del xlnet_base_cased_answer_models, test_loader torch.cuda.empty_cache() gc.collect()<concatenate>
print(training.cabin_adv.value_counts()) pd.pivot_table(training,index='Survived',columns='cabin_adv', values = 'Name', aggfunc='count' )
Titanic - Machine Learning from Disaster
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xlnet_base_cased_question_answer_preds = np.concatenate([xlnet_base_cased_question_preds, xlnet_base_cased_answer_preds], axis=1 )<load_pretrained>
training['numeric_ticket'] = training.Ticket.apply(lambda x: 1 if x.isnumeric() else 0) training['ticket_letters'] = training.Ticket.apply(lambda x: ''.join(x.split(' ')[:-1] ).replace('.','' ).replace('/','' ).lower() if len(x.split(' ')[:-1])>0 else 0)
Titanic - Machine Learning from Disaster
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test_loader, tokenizer = get_test_loader(model_type="roberta-base", content="Question", batch_size=32 )<predict_on_test>
training['numeric_ticket'].value_counts()
Titanic - Machine Learning from Disaster
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roberta_base_question_models = create_roberta_base_question_models(tokenizer) roberta_base_question_preds = predict(roberta_base_question_models, test_loader )<set_options>
pd.set_option("max_rows", None) training['ticket_letters'].value_counts()
Titanic - Machine Learning from Disaster