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<prepare_x_and_y>
random_forest = RandomForestClassifier(criterion='gini', n_estimators=1750, max_depth=7, min_samples_split=6, min_samples_leaf=6, max_features='auto', oob_score=True, random_state=42, n_jobs=-1, verbose=1) random_forest.fit(X_train, Y_train) Y_prediction =(random_forest.predict(X_test)).astype(int) random_forest.sco...
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target_train = train['AdoptionSpeed'] cleaned_train = train.drop(columns=['Name', 'RescuerID', 'Description', 'PetID', 'AdoptionSpeed']) test_pet_ID = test['PetID'] test_X = test.drop(columns=['Name', 'RescuerID', 'Description', 'PetID']) <split>
N = 5 oob = 0 probs = pd.DataFrame(np.zeros(( len(X_test), N * 2)) , columns=['Fold_{}_Prob_{}'.format(i, j)for i in range(1, N + 1)for j in range(2)]) fprs, tprs, scores = [], [], [] skf = StratifiedKFold(n_splits=N, random_state=N, shuffle=True) for fold,(trn_idx, val_idx)in enumerate(skf.split(X_train, Y_train), 1...
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x_train, x_valid, y_train, y_valid = train_test_split(cleaned_train, target_train, test_size=0.2, random_state=seed) <train_model>
rf = RandomForestClassifier(n_estimators=100,oob_score=True) scores = cross_val_score(random_forest, X_train, Y_train, cv=10, scoring = "accuracy") print("Scores:", scores) print("Mean:", scores.mean()) print("Standard Deviation:", scores.std() )
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if MODEL_USE == 1 or MODEL_USE==0: first_model = EnsembleModel(balancing=True) first_model.set_scorer(kappa) first_model.tune_best_param(x_train, y_train) first_model.validate(x_valid, y_valid )<load_pretrained>
predictions = cross_val_predict(random_forest, X_train, Y_train, cv=3) confusion_matrix(Y_train, predictions )
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filename = os.listdir(".. /input/train_sentiment")[1] filename = ".. /input/train_sentiment/"+filename with open(filename, 'r')as f: sentiment = json.load(f) sentiment<create_dataframe>
print("Precision:", precision_score(Y_train, predictions)) print("Recall:",recall_score(Y_train, predictions))
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def load_desc_sentiment(path): all_desc_sentiment_files = os.listdir(path) count_file = len(all_desc_sentiment_files) desc_sentiment_df = pd.DataFrame(columns=['PetID','desc_senti_magnitude','desc_senti_score']) current_file_index = 1 for filename in all_desc_sentiment_files: with open(path+filename, 'r')as f: senti...
f1_score(Y_train, predictions )
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tfv = TfidfVectorizer(min_df=2, max_features=None, strip_accents='unicode', analyzer='word', token_pattern=r'(?u)\b\w+\b', ngram_range=(1, 3), use_idf=1, smooth_idf=1, sublinear_tf=1, ) tfv.fit(train['Description']) desc_X_train = tfv.transform(train['Description']) desc_X_test = tfv.transform(test['Description']) ...
r_a_score = roc_auc_score(Y_train, y_scores) print("ROC-AUC-Score:", r_a_score )
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train_desc_sentiment_df = load_desc_sentiment(".. /input/train_sentiment/") test_desc_sentiment_df = load_desc_sentiment(".. /input/test_sentiment/" )<feature_engineering>
submission = pd.DataFrame({ "PassengerId": df_test["PassengerId"], "Survived": Y_prediction }) submission.to_csv('submission.csv', index=False )
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train_desc_sentiment_df['score_times_mag'] = train_desc_sentiment_df['desc_senti_magnitude'] * train_desc_sentiment_df['desc_senti_score'] test_desc_sentiment_df['score_times_mag'] = test_desc_sentiment_df['desc_senti_magnitude'] * test_desc_sentiment_df['desc_senti_score']<create_dataframe>
train_df = pd.read_csv("/kaggle/input/titanic/train.csv") test_df = pd.read_csv("/kaggle/input/titanic/test.csv") test_PassengerId = test_df["PassengerId"]
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desc_X_train = pd.DataFrame(desc_X_train, columns=['desc_{}'.format(i)for i in range(svd.n_components)]) desc_X_test = pd.DataFrame(desc_X_test, columns=['desc_{}'.format(i)for i in range(svd.n_components)]) train_with_desc = pd.concat([train,desc_X_train],axis=1) test_with_desc = pd.concat([test,desc_X_test],axis=1...
category2 = ["Cabin", "Name", "Ticket"] for c in category2: print("{} ".format(train_df[c].value_counts()))
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target_train = train_with_desc['AdoptionSpeed'] joint_train = train_with_desc.merge(train_desc_sentiment_df, how='left',left_on=['PetID'],right_on=['PetID']) cleaned_train = joint_train.drop(columns=['Name', 'RescuerID', 'Description', 'PetID', 'AdoptionSpeed']) cleaned_train.fillna(0.0,inplace=True) test_pet_ID = t...
train_df[["Pclass","Survived"]].groupby(["Pclass"], as_index = False ).mean().sort_values(by="Survived",ascending = False )
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if MODEL_USE == 2 or MODEL_USE==0: second_model = EnsembleModel(balancing=True) second_model.set_scorer(kappa) second_model.tune_best_param(x_train, y_train) second_model.validate(x_valid,y_valid )<define_variables>
train_df[["Sex","Survived"]].groupby(["Sex"], as_index = False ).mean().sort_values(by="Survived",ascending = False )
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def add_meta_feature(path,df): vertex_xs = [] vertex_ys = [] bounding_confidences = [] bounding_importance_fracs = [] dominant_blues = [] dominant_greens = [] dominant_reds = [] dominant_pixel_fracs = [] dominant_scores = [] label_descriptions = [] label_scores = [] nf_count = 0 nl_count = 0 pet_id = df['PetID'] for pe...
train_df[["SibSp","Survived"]].groupby(["SibSp"], as_index = False ).mean().sort_values(by="Survived",ascending = False )
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if MODEL_USE == 3 or MODEL_USE==0: third_model = EnsembleModel(balancing=True) third_model.set_scorer(kappa) third_model.tune_best_param(x_train, y_train) third_model.validate(x_valid,y_valid )<choose_model_class>
train_df[["Parch","Survived"]].groupby(["Parch"], as_index = False ).mean().sort_values(by="Survived",ascending = False )
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model = None if MODEL_USE == 1: model = first_model if MODEL_USE == 2: model = second_model if MODEL_USE == 0 or MODEL_USE == 3: pass model = third_model<train_model>
def detect_outliers(df,features): outlier_indices = [] for c in features: Q1 = np.percentile(df[c],25) Q3 = np.percentile(df[c],75) IQR = Q3 - Q1 outlier_step = IQR * 1.5 outlier_list_col = df[(df[c] < Q1 - outlier_step)|(df[c] > Q3 + outlier_step)].index outlier_indices.extend(outlier_list_col) outlier_indices = Co...
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model.re_fit_with_best_param(cleaned_train,target_train )<predict_on_test>
train_df.loc[detect_outliers(train_df,["Age","SibSp","Parch","Fare"])]
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final_result = model.predict(test_X )<prepare_output>
train_df = train_df.drop(detect_outliers(train_df,["Age","SibSp","Parch","Fare"]),axis = 0 ).reset_index(drop = True )
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submission_df = pd.DataFrame(data={'PetID' : test_pet_ID.tolist() , 'AdoptionSpeed' : final_result}) submission_df.head(5 )<save_to_csv>
train_df_len = len(train_df) train_df = pd.concat([train_df,test_df],axis = 0 ).reset_index(drop = True )
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submission_df.to_csv('submission.csv', index=False )<import_modules>
train_df.columns[train_df.isnull().any() ]
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import json import scipy as sp import pandas as pd import numpy as np from functools import partial from math import sqrt from sklearn.metrics import cohen_kappa_score, mean_squared_error from sklearn.metrics import confusion_matrix as sk_cmatrix from sklearn.model_selection import StratifiedKFold from sklearn.feature_...
train_df.isnull().sum()
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def confusion_matrix(rater_a, rater_b, min_rating=None, max_rating=None): assert(len(rater_a)== len(rater_b)) if min_rating is None: min_rating = min(rater_a + rater_b) if max_rating is None: max_rating = max(rater_a + rater_b) num_ratings = int(max_rating - min_rating + 1) conf_mat = [[0 for i in range(num_rating...
train_df[train_df["Embarked"].isnull() ]
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class OptimizedRounder(object): def __init__(self): self.coef_ = 0 def _kappa_loss(self, coef, X, y): X_p = np.copy(X) for i, pred in enumerate(X_p): if pred < coef[0]: X_p[i] = 0 elif pred >= coef[0] and pred < coef[1]: X_p[i] = 1 elif pred >= coef[1] and pred < coef[2]: X_p[i] = 2 elif pred >= coef[2] and pred < coe...
train_df["Embarked"] = train_df["Embarked"].fillna("C") train_df[train_df["Embarked"].isnull() ]
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def rmse(actual, predicted): return sqrt(mean_squared_error(actual, predicted))<load_from_csv>
train_df[train_df["Fare"].isnull() ]
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%%time print('Train') train = pd.read_csv(".. /input/train/train.csv") print(train.shape) print('Test') test = pd.read_csv(".. /input/test/test.csv") print(test.shape) print('Breeds') breeds = pd.read_csv(".. /input/breed_labels.csv") print(breeds.shape) print('Colors') colors = pd.read_csv(".. /input/color_l...
train_df["Fare"] = train_df["Fare"].fillna(np.mean(train_df[train_df["Pclass"] == 3]["Fare"]))
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target = train['AdoptionSpeed'] train_id = train['PetID'] test_id = test['PetID'] train.drop(['AdoptionSpeed', 'PetID'], axis=1, inplace=True) test.drop(['PetID'], axis=1, inplace=True )<feature_engineering>
train_df[train_df["Fare"].isnull() ]
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%%time doc_sent_mag = [] doc_sent_score = [] nf_count = 0 for pet in train_id: try: with open('.. /input/train_sentiment/' + pet + '.json', 'r')as f: sentiment = json.load(f) doc_sent_mag.append(sentiment['documentSentiment']['magnitude']) doc_sent_score.append(sentiment['documentSentiment']['score']) except FileNot...
train_df[train_df["Age"].isnull() ]
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%%time train_desc = train.Description.fillna("none" ).values test_desc = test.Description.fillna("none" ).values tfv = TfidfVectorizer(min_df=3, max_features=10000, strip_accents='unicode', analyzer='word', token_pattern=r'\w{1,}', ngram_range=(1, 3), use_idf=1, smooth_idf=1, sublinear_tf=1, stop_words = 'english') tf...
index_nan_age = list(train_df["Age"][train_df["Age"].isnull() ].index) for i in index_nan_age: age_pred = train_df["Age"][(( train_df["SibSp"] == train_df.iloc[i]["SibSp"])&(train_df["Parch"] == train_df.iloc[i]["Parch"])&(train_df["Pclass"] == train_df.iloc[i]["Pclass"])) ].median() age_med = train_df["Age"].median()...
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%%time vertex_xs = [] vertex_ys = [] bounding_confidences = [] bounding_importance_fracs = [] dominant_blues = [] dominant_greens = [] dominant_reds = [] dominant_pixel_fracs = [] dominant_scores = [] label_descriptions = [] label_scores = [] nf_count = 0 nl_count = 0 for pet in train_id: try: with open('.. /input/trai...
train_df[train_df["Age"].isnull() ]
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%%time train.drop(['Name', 'RescuerID', 'Description'], axis=1, inplace=True) test.drop(['Name', 'RescuerID', 'Description'], axis=1, inplace=True )<data_type_conversions>
name = train_df["Name"] train_df["Title"] = [i.split(".")[0].split(",")[-1].strip() for i in name]
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numeric_cols = ['Age', 'Quantity', 'Fee', 'VideoAmt', 'PhotoAmt', 'AdoptionSpeed', 'doc_sent_mag', 'doc_sent_score', 'dominant_score', 'dominant_pixel_frac', 'dominant_red', 'dominant_green', 'dominant_blue', 'bounding_importance', 'bounding_confidence', 'vertex_x', 'vertex_y', 'label_score'] + ['svd_{}'.format(i)for i...
train_df["Title"] = train_df["Title"].replace(["Lady","the Countess","Capt","Col","Don","Dr","Major","Rev","Sir","Jonkheer","Dona"],"other") train_df["Title"] = [0 if i == "Master" else 1 if i == "Miss" or i == "Ms" or i == "Mlle" or i == "Mrs" else 2 if i == "Mr" else 3 for i in train_df["Title"]] train_df["Title"].h...
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def run_cv_model(train, test, target, model_fn, params={}, eval_fn=None, label='model'): kf = StratifiedKFold(n_splits=5, random_state=42, shuffle=True) fold_splits = kf.split(train, target) cv_scores = [] qwk_scores = [] pred_full_test = 0 pred_train = np.zeros(( train.shape[0], 5)) all_coefficients = np.zeros(( 5, ...
train_df.drop(labels = ["Name"], axis = 1, inplace = True )
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optR = OptimizedRounder() coefficients_ = np.mean(results['coefficients'], axis=0) print(coefficients_) train_predictions = [r[0] for r in results['train']] train_predictions = optR.predict(train_predictions, coefficients_ ).astype(int) Counter(train_predictions )<predict_on_test>
train_df = pd.get_dummies(train_df,columns=["Title"]) train_df.head()
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optR = OptimizedRounder() test_predictions = [r[0] for r in results['test']] test_predictions = optR.predict(test_predictions, coefficients_ ).astype(int) Counter(test_predictions )<create_dataframe>
train_df["Fsize"] = train_df["SibSp"] + train_df["Parch"] + 1
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pd.DataFrame(sk_cmatrix(target, train_predictions), index=list(range(5)) , columns=list(range(5)) )<compute_test_metric>
train_df["family_size"] = [1 if i < 5 else 0 for i in train_df["Fsize"]]
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quadratic_weighted_kappa(target, train_predictions )<compute_test_metric>
train_df = pd.get_dummies(train_df, columns= ["family_size"]) train_df.head()
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rmse(target, [r[0] for r in results['train']] )<prepare_output>
train_df = pd.get_dummies(train_df, columns=["Embarked"]) train_df.head()
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submission = pd.DataFrame({'PetID': test_id, 'AdoptionSpeed': test_predictions}) submission.head()<save_to_csv>
a = "A/5.2151" a.replace(".","" ).replace("/","" ).strip().split(" ")[0]
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submission.to_csv('submission.csv', index=False) <set_options>
tickets = [] for i in list(train_df.Ticket): if not i.isdigit() : tickets.append(i.replace(".","" ).replace("/","" ).strip().split(" ")[0]) else: tickets.append("x") train_df["Ticket"] = tickets
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%matplotlib inline <import_modules>
train_df = pd.get_dummies(train_df, columns= ["Ticket"], prefix = "T") train_df.head(10 )
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import scipy as sp from collections import Counter from functools import partial<define_variables>
train_df["Pclass"] = train_df["Pclass"].astype("category") train_df = pd.get_dummies(train_df, columns= ["Pclass"]) train_df.head()
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data_path=".. /input/petfinder-adoption-prediction" first_kernel_path=".. /input/pets-adoption-simple-pandas-random-forest" image_kernel_path=".. /input/pet-adoption-only-images" svd_kernel_path=".. /input/pet-adoption-only-text-svd"<load_from_csv>
train_df["Sex"] = train_df["Sex"].astype("category") train_df = pd.get_dummies(train_df, columns=["Sex"]) train_df.head()
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train = pd.read_csv(data_path+"/train/train.csv") test = pd.read_csv(data_path+"/test/test.csv") color_labels = pd.read_csv(data_path+"/color_labels.csv") breed_labels = pd.read_csv(data_path+"/breed_labels.csv") state_labels = pd.read_csv(data_path+"/state_labels.csv" )<set_options>
train_df.drop(labels = ["PassengerId", "Cabin"], axis = 1, inplace = True )
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warnings.filterwarnings('ignore' )<load_from_csv>
from sklearn.model_selection import train_test_split, StratifiedKFold, GridSearchCV from sklearn.linear_model import LogisticRegression from sklearn.svm import SVC from sklearn.ensemble import RandomForestClassifier, VotingClassifier from sklearn.neighbors import KNeighborsClassifier from sklearn.tree import DecisionTr...
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df_all0 = pd.read_csv(first_kernel_path+"/df_all0.csv") df_all0.head()<load_from_csv>
test = train_df[train_df_len:] test.drop(labels = ["Survived"],axis = 1, inplace = True)
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txt_data = pd.read_csv(first_kernel_path+"/txt_data.csv") txt_data.columns = ['PetID','sent_magnitude','sent_score','sent_language'] txt_data.head()<load_from_csv>
train = train_df[:train_df_len] X_train = train.drop(labels = "Survived", axis = 1) y_train = train["Survived"] X_train, X_test, y_train, y_test = train_test_split(X_train, y_train, test_size = 0.50, random_state = 42) print("X_train",len(X_train)) print("X_test",len(X_test)) print("y_train",len(y_train)) print("y_te...
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img_df1a = pd.read_csv(image_kernel_path+"/img_df1a_local.csv") img_df1a.columns = ['PetID','ImageID','img_met_score','img_met_description'] img_df1a.head()<load_from_csv>
logreg = LogisticRegression() logreg.fit(X_train, y_train) acc_log_train = round(logreg.score(X_train, y_train)*100,2) acc_log_test = round(logreg.score(X_test,y_test)*100,2) print("Training Accuracy: % {}".format(acc_log_train)) print("Testing Accuracy: % {}".format(acc_log_test))
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img_df1c = pd.read_csv(image_kernel_path+"/img_df1c_local.csv") img_df1c.columns = ['PetID','ImageID','img_crp_x','img_crp_y','img_crp_conf','img_crp_if'] img_df1c.head()<load_from_csv>
random_state = 42 classifier = [DecisionTreeClassifier(random_state = random_state), SVC(random_state = random_state), RandomForestClassifier(random_state = random_state), LogisticRegression(random_state = random_state), KNeighborsClassifier() ] dt_param_grid = {"min_samples_split" : range(10,500,20), "max_depth": rang...
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img_df1p = pd.read_csv(image_kernel_path+"/img_df1p_local.csv") img_df1p.columns = ['PetID','ImageID','img_par_red','img_par_green','img_par_blue','img_par_score','img_par_pf'] img_df1p.head()<load_from_csv>
cv_result = [] best_estimators = [] for i in range(len(classifier)) : clf = GridSearchCV(classifier[i], param_grid=classifier_param[i], cv = StratifiedKFold(n_splits = 10), scoring = "accuracy", n_jobs = -1,verbose = 1) clf.fit(X_train,y_train) cv_result.append(clf.best_score_) best_estimators.append(clf.best_estima...
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des_svd_df = pd.read_csv(svd_kernel_path+"/des_svd_df.csv") des_svd_df.iloc[:,0:10].head()<load_from_csv>
votingC = VotingClassifier(estimators = [("dt",best_estimators[0]), ("rfc",best_estimators[2]), ("lr",best_estimators[3])], voting = "soft", n_jobs = -1) votingC = votingC.fit(X_train, y_train) print(accuracy_score(votingC.predict(X_test),y_test))
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prev_subm = pd.read_csv(".. /input/pets-adoption-simple-pandas-random-forest/submission.csv") prev_subm.head()<prepare_output>
test_survived = pd.Series(votingC.predict(test), name = "Survived" ).astype(int) results = pd.concat([test_PassengerId, test_survived],axis = 1) results.to_csv("titanic.csv", index = False )
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rescuers=df_all0.groupby(by='RescuerID')['RescuerID'].count() df_rescuers=pd.DataFrame(rescuers) df_rescuers.columns=['ResLev'] df_rescuers.reset_index(inplace=True) df_rescuers.head()<merge>
submission_format = pd.read_csv("/kaggle/input/titanic/gender_submission.csv" )
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dfm=df_all0.merge(df_rescuers,on='RescuerID') numeric_cols=['Age','PhotoAmt','Quantity','Fee','DescriptionLength','ResLev'] categorical_cols=['Sterilized','FurLength','Breed1','State','AdoptionSpeed','Breed2','MaturitySize','Gender','Dewormed','Color1','Color2','Color3','Health'] cols=['PetID']+numeric_cols+categorica...
train_data_orig = pd.read_csv("/kaggle/input/titanic/train.csv") train_data=train_data_orig.copy() train_data.head()
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dfm=dfm.merge(txt_data,on='PetID', how='left') categorical_cols=categorical_cols+['sent_language'] dfm.shape<merge>
test_data_orig = pd.read_csv("/kaggle/input/titanic/test.csv") test_data=test_data_orig.copy() test_data.head()
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n_svd=32 svd=des_svd_df.iloc[:,0:n_svd+3] svd.drop('Description',axis=1,inplace=True) svd.drop('AdoptionSpeed',axis=1,inplace=True) dfm=dfm.merge(svd,on='PetID', how='left') dfm.shape<groupby>
distinct_classes,value_counts=np.unique(train_data.Survived,return_counts=True )
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img_df1ad=img_df1a.groupby(['PetID'])['img_met_description'].apply(', '.join ).reset_index()<feature_engineering>
train_data.isnull().sum()
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img_df1ad['img_met_description1']=img_df1ad['img_met_description'].apply(lambda s:s.split(',')).apply(set ).apply(','.join )<filter>
test_data.isnull().sum()
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img_df1ad['img_met_description1'].loc[0]<filter>
train_data.drop('Cabin',axis=1,inplace=True) test_data.drop('Cabin',axis=1,inplace=True )
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img_df1ad['img_met_description'].loc[0]<drop_column>
train_data.isnull().sum()
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img_df1ad.drop('img_met_description',axis=1,inplace=True) img_df1ad.head()<import_modules>
test_data.isnull().sum()
Titanic - Machine Learning from Disaster
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from sklearn.feature_extraction.text import TfidfVectorizer from sklearn.decomposition import TruncatedSVD<train_on_grid>
train_data.drop('PassengerId',axis=1,inplace=True )
Titanic - Machine Learning from Disaster
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def find_svd(df,txt_col_name,n_comp): tfv = TfidfVectorizer(analyzer='word', stop_words = 'english', token_pattern=r'\b[a-zA-Z]\w+\b', min_df=1, max_features=10000, strip_accents='unicode', ngram_range=(1, 32), use_idf=1, smooth_idf=1, sublinear_tf=1,) corpus=list(df[txt_col_name]) txt_trasf=tfv.fit_transform(corpus)...
testPIds=test_data['PassengerId'] test_data.drop('PassengerId',axis=1,inplace=True )
Titanic - Machine Learning from Disaster
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nc=16 img_met_svd=find_svd(img_df1ad,'img_met_description1',nc) img_met_svd.columns=['SVD_'+str(c)for c in range(0,nc)] img_met_svd['PetID']=img_df1ad['PetID']<groupby>
def change_gender_num(s): if(s=='male'): return 1 else: return 0 train_data['Sex']=train_data['Sex'].apply(change_gender_num) test_data['Sex']=test_data['Sex'].apply(change_gender_num )
Titanic - Machine Learning from Disaster
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img_df1ar=img_met_svd img_df1ar['img_met_score_max']=img_df1a.groupby(by=['PetID','ImageID'],as_index=False ).agg({'img_met_score': 'max'})['img_met_score'] img_df1ar['img_met_score_min']=img_df1a.groupby(by=['PetID','ImageID'],as_index=False ).agg({'img_met_score': 'min'})['img_met_score'] img_df1ar.head()<drop_column...
train_data['relatives']=train_data['SibSp']+train_data['Parch']+1 train_data.drop(['SibSp','Parch'],axis=1,inplace=True )
Titanic - Machine Learning from Disaster
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img_df1cr1=img_df1c[img_df1c['ImageID']==1] img_df1cr1.drop('ImageID', axis=1, inplace=True) img_df1cr1.columns=['PetID','img_crp_x1','img_crp_y1','img_crp_conf1','img_crp_if1'] img_df1cr2=img_df1c[img_df1c['ImageID']==2] img_df1cr2.drop('ImageID', axis=1, inplace=True) img_df1cr2.columns=['PetID','img_crp_x2','img_c...
test_data['relatives']=test_data['SibSp']+test_data['Parch']+1 test_data.drop(['SibSp','Parch'],axis=1,inplace=True )
Titanic - Machine Learning from Disaster
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img_df1cr=img_df1cr.merge(img_df1cr2,on='PetID') img_df1cr=img_df1cr.merge(img_df1cr3,on='PetID') img_df1cr.head()<count_missing_values>
len(train_data.Ticket.unique() )
Titanic - Machine Learning from Disaster
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img_df1cr.isna().sum()<correct_missing_values>
train_data.drop('Ticket',axis=1,inplace=True )
Titanic - Machine Learning from Disaster
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img_df1cr.fillna(-1, inplace=True )<groupby>
test_data.drop('Ticket',axis=1,inplace=True )
Titanic - Machine Learning from Disaster
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img_df1pg=img_df1p.groupby(by=['PetID','ImageID'],as_index=False ).agg({'img_par_score': 'max', 'img_par_red':'first', 'img_par_green':'first', 'img_par_blue':'first', 'img_par_pf':'first'}) img_df1pg.head()<drop_column>
def get_title(name): return name.strip().split(',')[1].split('.')[0] train_data['title']=train_data['Name'].apply(get_title) train_data.drop('Name',axis=1,inplace=True) test_data['title']=test_data['Name'].apply(get_title) test_data.drop('Name',axis=1,inplace=True )
Titanic - Machine Learning from Disaster
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img_df1pr1=img_df1pg[img_df1pg['ImageID']==1] img_df1pr1.drop('ImageID', axis=1, inplace=True) img_df1pr1.columns=['PetID','img_par_red1','img_par_green1','img_par_blue1','img_par_pf1','img_par_score1'] img_df1pr2=img_df1pg[img_df1pg['ImageID']==2] img_df1pr2.drop('ImageID', axis=1, inplace=True) img_df1pr2.columns=[...
matplotlib.rcParams['figure.figsize']=(15,10 )
Titanic - Machine Learning from Disaster
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img_df1pr=img_df1pr.merge(img_df1pr2,on='PetID') img_df1pr=img_df1pr.merge(img_df1pr3,on='PetID') img_df1pr.head()<merge>
( keys,values)=np.unique(train_data[train_data.Survived==1].title,return_counts=True )
Titanic - Machine Learning from Disaster
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img=img_df1ar img=img.merge(img_df1cr,on=['PetID'], how='left') img=img.merge(img_df1pr,on=['PetID'], how='left') img.shape<correct_missing_values>
train_data.Age.fillna(train_data.Age.mean() ,inplace=True )
Titanic - Machine Learning from Disaster
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img.fillna(-1,inplace=True) img.head()<merge>
test_data.Age.fillna(test_data.Age.mean() ,inplace=True )
Titanic - Machine Learning from Disaster
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dfm=dfm.merge(img,on='PetID', how='left') dfm.shape<data_type_conversions>
train_data.isnull().sum()
Titanic - Machine Learning from Disaster
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df_all['sent_magnitude'].fillna(-1, inplace=True) df_all['sent_score'].fillna(-1, inplace=True) df_all['sent_language'].fillna('en', inplace=True )<correct_missing_values>
test_data.isnull().sum()
Titanic - Machine Learning from Disaster
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df_all.fillna(-1, inplace=True )<data_type_conversions>
train_data.fillna(train_data.Embarked.value_counts().idxmax() ,inplace=True )
Titanic - Machine Learning from Disaster
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df_all[categorical_cols]=df_all[categorical_cols].apply(lambda c : c.astype('category'))<save_to_csv>
test_data.fillna(test_data.Fare.mean() ,inplace=True )
Titanic - Machine Learning from Disaster
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df_all.to_csv('df_all.csv') df_all.head()<filter>
survived_train_data=train_data[train_data.Survived==1]
Titanic - Machine Learning from Disaster
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df_all.dtypes[df_all.dtypes=='object']<filter>
( keys,values)=np.unique(survived_train_data.Embarked,return_counts=True )
Titanic - Machine Learning from Disaster
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dftrain=df_all[np.invert(df_all['AdoptionSpeed']==-1)].copy() dftest=df_all[df_all['AdoptionSpeed']==-1].copy()<drop_column>
dummies=pd.get_dummies(train_data.Embarked )
Titanic - Machine Learning from Disaster
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dftrain = dftrain.drop(['PetID'],axis=1) dftest = dftest.drop(['PetID'],axis=1 )<prepare_x_and_y>
dummies_test=pd.get_dummies(test_data.Embarked )
Titanic - Machine Learning from Disaster
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XT = dftest.drop('AdoptionSpeed',axis=1) y = dftrain['AdoptionSpeed'] X = dftrain.drop('AdoptionSpeed',axis=1 )<import_modules>
train_data2=pd.concat([train_data,dummies],axis='columns' )
Titanic - Machine Learning from Disaster
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from sklearn.model_selection import train_test_split from sklearn.metrics import cohen_kappa_score from sklearn.metrics import accuracy_score from sklearn.metrics import confusion_matrix from sklearn.model_selection import KFold<import_modules>
test_data2=pd.concat([test_data,dummies_test],axis='columns' )
Titanic - Machine Learning from Disaster
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import lightgbm as lgb<define_variables>
train_data2.drop('Embarked',axis=1,inplace=True )
Titanic - Machine Learning from Disaster
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cat_features=[x for x in categorical_cols if x!='AdoptionSpeed']<init_hyperparams>
test_data2.drop('Embarked',axis=1,inplace=True )
Titanic - Machine Learning from Disaster
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parameters = {'application': 'regression', 'boosting': 'gbdt', 'metric': 'rmse', 'max_bin' : 8, 'num_leaves': 12, 'max_depth': 4, 'learning_rate': 0.01, 'bagging_fraction': 0.8, 'feature_fraction': 0.8, 'min_split_gain': 0.01, 'min_child_samples': 128, 'min_child_weight': 0.1, 'data_random_seed': 123, 'verbosity': -1, ...
thresh_title_counts=10 title_names=(train_data2.title.value_counts() < thresh_title_counts )
Titanic - Machine Learning from Disaster
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def qks(a,b): return cohen_kappa_score(np.round(a), np.round(b), weights='quadratic' )<split>
train_data2['title']=train_data2.title.apply(lambda x:'Misc' if title_names.loc[x]==True else x )
Titanic - Machine Learning from Disaster
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kf_splits=10 k_fold = KFold(n_splits=kf_splits, shuffle=True) k=0 df_qks=pd.DataFrame(columns=['best_round','qks_train','qks_valid']) df_y=pd.DataFrame(index=XT.index) perf_list=[] for train_idx, valid_idx in k_fold.split(X,y): k=k+1 print('Step k={}'.format(k)) X_train = X.iloc[train_idx, :] X_valid = X.iloc[valid_...
distinct_keys=list(train_data2['title'].value_counts().keys() )
Titanic - Machine Learning from Disaster
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df_all[df_all['AdoptionSpeed'].astype(int)>=0]['AdoptionSpeed'].value_counts()<count_values>
distinct_keys.remove('Misc' )
Titanic - Machine Learning from Disaster
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sum(ym>3.5 )<statistical_test>
test_data2['title']=test_data2.title.apply(lambda x:'Misc' if x not in distinct_keys else x )
Titanic - Machine Learning from Disaster
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def distrib_err(coef,test_proba,train_label): test_predictions = pd.cut(test_proba, [-np.inf] + list(np.sort(coef)) + [np.inf], labels = [0, 1, 2, 3, 4]) N_CLASS=5 freq_train=np.zeros(N_CLASS) freq_test=np.zeros(N_CLASS) delta_freq=np.zeros(N_CLASS) for i in range(0,N_CLASS): freq_train[i]=100*Counter(train_label)[...
test_data2['title'].value_counts()
Titanic - Machine Learning from Disaster
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initial_coef = [2.0, 2.5, 3.0, 3.5] distrib_err_partial = partial(distrib_err, test_proba=ym, train_label=y) final_coef = sp.optimize.minimize(distrib_err_partial, initial_coef, method='nelder-mead') final_coef<categorify>
dummies_embarked_train=pd.get_dummies(train_data2['title'] )
Titanic - Machine Learning from Disaster
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def apply_lim(y_calc,limits): y_round=np.zeros(len(y_calc)) for i,yc in enumerate(y_calc): if(yc<=limits[0]): y_round[i]=0 if(( yc>limits[0])&(yc<=limits[1])) : y_round[i]=1 if(( yc>limits[1])&(yc<=limits[2])) : y_round[i]=2 if(( yc>limits[2])&(yc<=limits[3])) : y_round[i]=3 if(yc>limits[3]): y_round[i]=4 return y_roun...
dummies_embarked_test=pd.get_dummies(test_data2['title'] )
Titanic - Machine Learning from Disaster
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y_test_pred_r = apply_lim(ym,final_coef['x'] )<data_type_conversions>
train_data3=pd.concat([train_data2,dummies_embarked_train],axis='columns' )
Titanic - Machine Learning from Disaster
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y_pred = y_test_pred_r.astype('int' )<prepare_output>
test_data3=pd.concat([test_data2,dummies_embarked_test],axis='columns' )
Titanic - Machine Learning from Disaster
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subm=pd.DataFrame({'PetID': dftest_ids,'AdoptionSpeed': y_pred}) subm.head()<count_values>
train_data3.drop('title',axis=1,inplace=True )
Titanic - Machine Learning from Disaster
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subm['AdoptionSpeed'].value_counts()<save_to_csv>
test_data3.drop('title',axis=1,inplace=True )
Titanic - Machine Learning from Disaster
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subm.to_csv('submission.csv', index=False )<import_modules>
train_data3.isnull().sum()
Titanic - Machine Learning from Disaster
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np.random.seed(369 )<compute_test_metric>
test_data3.isnull().sum()
Titanic - Machine Learning from Disaster
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def confusion_matrix(rater_a, rater_b, min_rating=None, max_rating=None): assert(len(rater_a)== len(rater_b)) if min_rating is None: min_rating = min(rater_a + rater_b) if max_rating is None: max_rating = max(rater_a + rater_b) num_ratings = int(max_rating - min_rating + 1) conf_mat = [[0 for i in range(num_rating...
yTrain=train_data3.Survived train_data4=train_data3.drop('Survived',axis=1) xTrain=train_data4.values
Titanic - Machine Learning from Disaster
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class OptimizedRounder(object): def __init__(self): self.coef_ = 0 def _kappa_loss(self, coef, X, y): X_p = np.copy(X) for i, pred in enumerate(X_p): if pred < coef[0]: X_p[i] = 0 elif pred >= coef[0] and pred < coef[1]: X_p[i] = 1 elif pred >= coef[1] and pred < coef[2]: X_p[i] = 2 elif pred >= coef[2] and pred < coe...
xTest=test_data3.values
Titanic - Machine Learning from Disaster