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import numpy as np import pandas as pd from sklearn.model_selection import train_test_split from keras.preprocessing.image import ImageDataGenerator from keras.utils import to_categorical from keras.models import Sequential, load_model from keras.layers import Dense, Dropout, Flatten from keras.layers import Conv2D, Ma...
CFG = { 'fold_num': 5, 'seed': 719, 'model_arch': 'tf_efficientnet_b4_ns', 'img_size': 512, 'epochs': 10, 'train_bs': 32, 'valid_bs': 32, 'lr': 1e-4, 'num_workers': 4, 'accum_iter': 1, 'verbose_step': 1, 'device': 'cuda:0', 'tta': 3, 'used_epochs': [9,1,5], 'weights': [1,1,1] }
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train = pd.read_csv('.. /input/digit-recognizer/train.csv') test = pd.read_csv('.. /input/digit-recognizer/test.csv') df = train.copy() df_test = test.copy()<count_missing_values>
train = pd.read_csv('.. /input/cassava-leaf-disease-classification/train.csv') train.head()
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df.isnull().any().sum()<count_missing_values>
train.label.value_counts()
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df_test.isnull().any().sum()<define_variables>
submission = pd.read_csv('.. /input/cassava-leaf-disease-classification/sample_submission.csv') submission.head()
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seed = 3141 np.random.seed(seed )<split>
class CassavaDataset(Dataset): def __init__( self, df, data_root, transforms=None, output_label=True ): super().__init__() self.df = df.reset_index(drop=True ).copy() self.transforms = transforms self.data_root = data_root self.output_label = output_label def __len__(self): return self.df.shape[0] def __getitem__(sel...
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X = train.iloc[:,1:] Y = train.iloc[:,0] x_train , x_test , y_train , y_test = train_test_split(X, Y , test_size=0.1, random_state=seed )<categorify>
HorizontalFlip, VerticalFlip, IAAPerspective, ShiftScaleRotate, CLAHE, RandomRotate90, Transpose, ShiftScaleRotate, Blur, OpticalDistortion, GridDistortion, HueSaturationValue, IAAAdditiveGaussianNoise, GaussNoise, MotionBlur, MedianBlur, IAAPiecewiseAffine, RandomResizedCrop, IAASharpen, IAAEmboss, RandomBrightnessCon...
Cassava Leaf Disease Classification
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x_train = x_train.values.reshape(-1, 28, 28, 1) x_test = x_test.values.reshape(-1, 28, 28, 1) df_test=df_test.values.reshape(-1,28,28,1 )<define_variables>
class CassvaImgClassifier(nn.Module): def __init__(self, model_arch, n_class, pretrained=False): super().__init__() self.model = timm.create_model(model_arch, pretrained=pretrained) n_features = self.model.classifier.in_features self.model.classifier = nn.Linear(n_features, n_class) def forward(self, x): x = self.mod...
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datagen = ImageDataGenerator( featurewise_center=False, samplewise_center=False, featurewise_std_normalization=False, samplewise_std_normalization=False, zca_whitening=False, rotation_range=10, zoom_range = 0.1, width_shift_range=0.1, height_shift_range=0.1, horizontal_flip=False, vertical_flip=False )<data_type_conve...
test = pd.DataFrame() test['image_id'] = list(os.listdir('.. /input/cassava-leaf-disease-classification/test_images/')) test_ds = CassavaDataset(test, '.. /input/cassava-leaf-disease-classification/test_images/', transforms=get_inference_transforms() , output_label=False) tst_loader = torch.utils.data.DataLoader( tes...
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x_train = x_train.astype("float32")/255 x_test = x_test.astype("float32")/255 df_test = df_test.astype("float32")/255<train_model>
tst_preds = [] model_name = ['net1_fold0_epoch0','tf_efficientnet_b4_ns_fold_0_4','tf_efficientnet_b4_ns_fold_3_5'] for i in range(len(model_name)) : model.load_state_dict(torch.load('.. /input/model903/{}'.format(model_name[i]))) with torch.no_grad() : for _ in range(CFG['tta']): tst_preds += [CFG['weights'][i]/sum(C...
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datagen.fit(x_train )<categorify>
test['label'] = np.argmax(tst_preds, axis=1) test.head()
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y_train = to_categorical(y_train, num_classes=10) y_test = to_categorical(y_test, num_classes=10) print(y_train[0] )<choose_model_class>
test['label'] = np.argmax(tst_preds, axis=1) test.head()
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<choose_model_class><EOS>
test.to_csv('submission.csv', index=False )
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<SOS> metric: CategorizationAccuracy Kaggle data source: cassava-leaf-disease-classification<choose_model_class>
%matplotlib inline
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model.compile(optimizer=optimizer, loss="categorical_crossentropy", metrics=["accuracy"] )<choose_model_class>
import torch import torch.nn as nn import torch.optim as optim from torch.optim.lr_scheduler import CosineAnnealingLR, CosineAnnealingWarmRestarts import torch.utils.data as data from torch.utils.data import DataLoader import torchvision from torchvision import transforms from torch.cuda.amp import autocast, GradScaler
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reduce_lr = LearningRateScheduler(lambda x: 1e-3 * 0.9 ** x )<train_model>
!pip install '.. /input/efficientnet-pytorch-07/efficientnet_pytorch-0.7.0'
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decays = [(lambda x: 1e-3 * 0.9 ** x )(x)for x in range(10)] i=1 for lr in decays: print("Epoch " + str(i)+" Learning Rate: " + str(lr)) i+=1<choose_model_class>
DEBUG = False INFERENCE = True def seed_everything(seed): random.seed(seed) os.environ['PYTHONHASHSEED'] = str(seed) np.random.seed(seed) torch.manual_seed(seed) torch.cuda.manual_seed(seed) torch.backends.cudnn.deterministic = True torch.backends.cudnn.benchmark = True device = torch.device('cuda' if torch.cuda.i...
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early_stopping = EarlyStopping( min_delta=0.001, patience=20, restore_best_weights=True, )<define_variables>
if INFERENCE: test_df = pd.DataFrame() test_df['image_id'] = list(os.listdir(TEST_IMGS + '/')) test_df.loc[:, 'img_path'] = TEST_IMGS + '/' + test_df.image_id if DEBUG: test_df = pd.read_csv(TRAIN ).head(128) test_df.loc[:, 'img_path'] = TRAIN_IMGS + '/' + test_df.image_id else: train_df = pd.read_csv(TRAIN) train_df...
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batch_size = 64 epochs = 50<train_model>
if(DEBUG)&(not INFERENCE): num_labels = len(train_df.loc[:, 'label'].unique()) print('train ds', train_df.loc[:, 'label'].value_counts(normalize=True ).values) print('val ds', val_df.loc[:, 'label'].value_counts(normalize=True ).values )
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history = model.fit_generator(datagen.flow(x_train, y_train, batch_size = batch_size), epochs = epochs, validation_data =(x_test, y_test), verbose=1, steps_per_epoch=x_train.shape[0] // batch_size, callbacks = [reduce_lr] )<import_modules>
HorizontalFlip, VerticalFlip, IAAPerspective, ShiftScaleRotate, CLAHE, RandomRotate90, Transpose, ShiftScaleRotate, Blur, OpticalDistortion, GridDistortion, HueSaturationValue, IAAAdditiveGaussianNoise, GaussNoise, MotionBlur, MedianBlur, IAAPiecewiseAffine, RandomResizedCrop, IAASharpen, IAAEmboss, RandomBrightnessCon...
Cassava Leaf Disease Classification
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import matplotlib.pyplot as plt<save_to_csv>
class CassavaDataset(data.Dataset): def __init__(self, df, transform=None, phase='train'): self.transform = transform self.phase= phase self.df = df def __len__(self): return len(self.df) def __getitem__(self, index): img_path = self.df.iloc[index].loc['img_path'] img = cv2.imread(img_path) img = cv2.cvtColor(img, cv...
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pred_digits_test = np.argmax(model.predict(df_test),axis=1) image_id_test = [] for i in range(len(pred_digits_test)) : image_id_test.append(i+1) d = {'ImageId':image_id_test,'Label':pred_digits_test} answer = pd.DataFrame(d) answer.to_csv('answer.csv',index=False )<set_options>
transform = AlbumTransform() if INFERENCE: if cfg['test']['TTA']: test_ds = CassavaDataset(test_df, transform=transform, phase='test_tta') else: test_ds = CassavaDataset(test_df, transform=transform, phase='test') test_dl = DataLoader(test_ds, batch_size=cfg['test']['batch_size'], shuffle=cfg['test']['shuffle'], num_...
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%matplotlib inline %load_ext autoreload %autoreload 2 <load_from_csv>
class CassavaNet(nn.Module): def __init__(self): super().__init__() if INFERENCE: self.model = EfficientNet.from_name(cfg['model']['arch'], in_channels=3) else: self.model = EfficientNet.from_pretrained(cfg['model']['arch'], in_channels=3) num_in_features = self.model._fc.in_features self.model._fc = nn.Linear(num_in...
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train_data = pd.read_csv("/kaggle/input/digit-recognizer/train.csv") test_data = pd.read_csv("/kaggle/input/digit-recognizer/test.csv" )<train_model>
model = CassavaNet()
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print("Training Data : ") train_data.head(3 ).iloc[:,:17]<feature_engineering>
criterion = nn.CrossEntropyLoss() optimizer = optim.Adam(params = model.parameters() , lr=cfg['optim']['lr'] )
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train_data_norm = train_data.iloc[:, 1:] / 255.0 test_data_norm = test_data / 255.0<define_variables>
class RunOneEpoch() : def __init__(self, model, dataloaders, criterion, optimizer, scheduler=None): self.model = model self.dataloaders = dataloaders self.criterion = criterion.to(device) self.optimizer = optimizer self.scheduler = scheduler def train(self, phase='train'): batch_loss = 0.0 batch_corrects = 0 epoch_los...
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num_examples_train = train_data.shape[0] num_examples_test = test_data.shape[0] n_h = 32 n_w = 32 n_c = 3<define_variables>
def get_checkpoint(folder, checkpoint_name): checkpoint_path = os.path.join(folder, checkpoint_name) checkpoint = torch.load(checkpoint_path, map_location=device) return checkpoint
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<categorify><EOS>
%%time if INFERENCE: if cfg['test']['TTA']: outputs = [] model = CassavaNet().to(device) try: checkpoint = get_checkpoint(cfg['test']['checkpoint'], f'checkpoint.pth') model.load_state_dict(checkpoint['model']) except: print('No checkpoint.') criterion = nn.CrossEntropyLoss() optimizer = optim.Adam(params = model.p...
Cassava Leaf Disease Classification
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<SOS> metric: CategorizationAccuracy Kaggle data source: cassava-leaf-disease-classification<train_model>
import numpy as np import pandas as pd import os import matplotlib.pyplot as plt import cv2 import tensorflow as tf from tensorflow import keras
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for example in range(num_examples_train): Train_input_images[example] = cv2.resize(Train_input_images[example],(n_h, n_w)) for example in range(num_examples_test): Test_input_images[example] = cv2.resize(Test_input_images[example],(n_h, n_w))<define_variables>
test_batch_size = 8 image_size = 512
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Train_labels = np.array(train_data.iloc[:, 0] )<choose_model_class>
PATH = '.. /input/cassava-leaf-disease-classification/' sub_df = pd.read_csv(PATH + 'sample_submission.csv' )
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image_generator = ImageDataGenerator( rotation_range=27, width_shift_range=0.3, shear_range=0.2, zoom_range=0.2, horizontal_flip=False, samplewise_center=True, samplewise_std_normalization=True ) validation_datagen = ImageDataGenerator()<choose_model_class>
sub_df["path"] = PATH + 'test_images/' + sub_df["image_id"]
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pretrained_model = keras.applications.resnet50.ResNet50(input_shape=(n_h, n_w, n_c), include_top=False, weights='imagenet') model = keras.Sequential([ pretrained_model, keras.layers.Flatten() , keras.layers.Dense(units=60, activation='relu'), keras.layers.Dense(units=10, activation='softmax') ] )<choose_model_class>
test_ds = tf.data.Dataset.from_tensor_slices(( sub_df.path.values, sub_df.label.values))
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Optimizer = 'RMSprop' model.compile(optimizer=Optimizer, loss='sparse_categorical_crossentropy', metrics=['accuracy'] )<split>
AUTOTUNE = tf.data.experimental.AUTOTUNE
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train_images, dev_images, train_labels, dev_labels = train_test_split(Train_input_images, Train_labels, test_size=0.1, train_size=0.9, shuffle=True, random_state=44) test_images = Test_input_images<define_search_model>
def test_aug(image): data = {"image":image} aug_data = test_transforms(**data) aug_img = aug_data["image"] aug_img = tf.cast(aug_img, tf.float32) return aug_img
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train_datagen = ImageDataGenerator( rotation_range=27, width_shift_range=0.3, height_shift_range=0.2, shear_range=0.3, zoom_range=0.2, horizontal_flip=False) validation_datagen = ImageDataGenerator()<train_model>
def process_data(image_path, label, func_aug): image = tf.io.read_file(image_path) image = tf.image.decode_jpeg(image) image = tf.image.convert_image_dtype(image, tf.float32) aug_img = tf.numpy_function(func=func_aug, inp=[image], Tout=tf.float32) return aug_img, label
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class myCallback(keras.callbacks.Callback): def on_epoch_end(self, epoch, logs={}): if(logs.get('accuracy')> 0.999999): print("Stop training!") self.model.stop_training = True<train_model>
test_ds_alb = test_ds.map(partial(process_data, func_aug=test_aug), num_parallel_calls=AUTOTUNE ).prefetch(AUTOTUNE )
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EPOCHS = 5 batch_size = 212 history = model.fit_generator(train_datagen.flow(train_images,train_labels, batch_size=batch_size), steps_per_epoch=train_images.shape[0] / batch_size, epochs=EPOCHS, validation_data=validation_datagen.flow(dev_images,dev_labels, batch_size=batch_size), validation_steps=dev_images.shape[0] /...
test_ds_alb = test_ds_alb.map(set_shapes, num_parallel_calls=AUTOTUNE ).batch(8 )
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submission = pd.read_csv('.. /input/digit-recognizer-submission/submission.csv') submission.to_csv('digit_submission.csv', index=False )<load_from_csv>
os.system('pip install /kaggle/input/kerasapplications -q') os.system('pip install /kaggle/input/efficientnet-keras-source-code/ -q --no-deps' )
Cassava Leaf Disease Classification
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mnist_train = pd.read_csv("/kaggle/input/digit-recognizer/train.csv") mnist_test = pd.read_csv("/kaggle/input/digit-recognizer/test.csv" )<categorify>
efficientnet = efn.EfficientNetB4(weights=None, include_top=False, drop_connect_rate=0.3, input_shape=(image_size, image_size, 3)) inputs = Input(shape=(image_size, image_size, 3)) efficientnet = efficientnet(inputs) pooling = GlobalAveragePooling2D()(efficientnet) dropout = Dropout(0.3 )(pooling) outputs = Dense(5,...
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mnist_train_data = mnist_train.loc[:, "pixel0":] mnist_train_label = mnist_train.loc[:, "label"] mnist_train_data = mnist_train_data/255.0 mnist_test = mnist_test/255.0<normalization>
preds = [] for fold in [2,3]: model.load_weights('.. /input/effnetb45128weights/EffNetB4_512_8_weights_fold_{}.h5'.format(fold+1)) preds.append(model.predict(test_ds_alb, workers=4, verbose=1))
Cassava Leaf Disease Classification
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standardized_scalar = StandardScaler() standardized_data = standardized_scalar.fit_transform(mnist_train_data) standardized_data.shape<train_model>
preds = [] for fold in [2,3]: model.load_weights('.. /input/effnetb45128weights/EffNetB4_512_8_weights_fold_{}.h5'.format(fold+1)) fold_preds = [] for i in range(5): fold_preds.append(model.predict(test_ds_alb, workers=4, verbose=1)) preds.append(np.mean(fold_preds, axis=0))
Cassava Leaf Disease Classification
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cov_matrix = np.matmul(standardized_data.T, standardized_data) cov_matrix.shape<compute_train_metric>
preds_avg = np.mean(preds, axis=0 )
Cassava Leaf Disease Classification
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lambdas, vectors = eigh(cov_matrix, eigvals=(782, 783)) vectors.shape<concatenate>
y_pred = np.argmax(preds_avg, axis=-1 )
Cassava Leaf Disease Classification
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new_coordinates = np.matmul(vectors, standardized_data.T) print(new_coordinates.shape) new_coordinates = np.vstack(( new_coordinates, mnist_train_label)).T<prepare_output>
sub_df['label'] = y_pred
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df_new = pd.DataFrame(new_coordinates, columns=["f1", "f2", "labels"]) df_new.head()<normalization>
sub_df.drop(['path'], axis=1, inplace=True )
Cassava Leaf Disease Classification
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<concatenate><EOS>
sub_df.to_csv('submission.csv', index=False )
Cassava Leaf Disease Classification
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def Classifier(shape_): inp = Input(shape=(shape_)) x = Bidirectional(GRU(128,return_sequences=True))(inp) x = Bidirectional(GRU(128,return_sequences=True))(x) x = Bidirectional(GRU(128,return_sequences=True))(x) out = Dense(11, activation='softmax', name='out' )(x) model = models.Model(inputs=inp, outputs=out) op...
pip install cleantext
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class MacroF1(Callback): def __init__(self, model, inputs, targets): self.model = model self.inputs = inputs self.targets = np.argmax(targets, axis=2 ).reshape(-1) def on_epoch_end(self, epoch, logs): pred = np.argmax(self.model.predict(self.inputs), axis=2 ).reshape(-1) score = f1_score(self.targets, pred, average="...
pip install ktrain
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def normalize(train, test): train_input_mean = train.signal.mean() train_input_sigma = train.signal.std() train['signal'] =(train.signal-train_input_mean)/train_input_sigma test['signal'] =(test.signal-train_input_mean)/train_input_sigma return train, test<load_pretrained>
warnings.filterwarnings("ignore" )
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def run_everything(fe_config : List)-> NoReturn: not_feats_cols = ['time'] target_col = ['open_channels'] init_logger() with timer(f'Reading Data'): logger.info('Reading Data Started...') base = os.path.abspath('/kaggle/input/liverpool-ion-switching/') train, test, sample_submission = read_data(base) logger.info('Re...
df = pd.read_csv(".. /input/nlp-getting-started/train.csv") display(df.head()) display(df.shape )
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warnings.filterwarnings('ignore' )<load_from_csv>
l=len(df) display(l) cleanlist=[] textlength=[] for i in range(l): ct=cleantext.clean(df.iloc[i,3], clean_all= True) cleanlist.append(ct) lct=len(ct) textlength.append(lct)
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%%time df_train = pd.read_feather('.. /input/ashrae-feather/train.ft') building = pd.read_feather('.. /input/ashrae-feather/building.ft') le = LabelEncoder() building.primary_use = le.fit_transform(building.primary_use) DATA_PATH = ".. /input/ashrae-energy-prediction/" weather_train = pd.read_csv(DATA_PATH + 'weathe...
df_clean=pd.DataFrame(cleanlist) df_clean.columns=['cleantext'] frames=[df,df_clean] newdf=pd.concat(frames, axis=1) display(newdf )
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%%time df_train = df_train.query('not(building_id <= 104 & meter == 0 & timestamp <= "2016-05-20 18")') df_train = df_train.query('not(building_id == 681 & meter == 0 & timestamp <= "2016-04-27")') df_train = df_train.query('not(building_id == 761 & meter == 0 & timestamp <= "2016-09-02")') df_train = df_train.query...
( x_train, y_train),(x_test, y_test), preproc=text.texts_from_df(newdf, 'cleantext',label_columns=['target'], maxlen=127,max_features=100000, preprocess_mode='bert', val_pct=.1 )
Natural Language Processing with Disaster Tweets
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<data_type_conversions>
model=text.text_classifier('bert',(x_train, y_train), preproc=preproc) learner=ktrain.get_learner(model, train_data=(x_train, y_train), val_data=(x_test, y_test), batch_size=32 )
Natural Language Processing with Disaster Tweets
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def fill_weather_dataset(weather_df): time_format = "%Y-%m-%d %H:%M:%S" start_date = datetime.datetime.strptime(weather_df['timestamp'].min() ,time_format) end_date = datetime.datetime.strptime(weather_df['timestamp'].max() ,time_format) total_hours = int(((end_date - start_date ).total_seconds() + 3600)/ 3600) hour...
learner.fit_onecycle(2e-5, 3) predictor=ktrain.get_predictor(learner.model, preproc )
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def rmse(ytrue, ypred): return np.sqrt(np.mean(np.square(ypred - ytrue), axis=0)) def rmsle(ytrue, ypred): return np.sqrt(np.mean(np.square(np.log1p(ypred)- np.log1p(ytrue)) , axis=0))<create_dataframe>
predictor.predict(['calm','earthquake'] )
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weather_train = fill_weather_dataset(weather_train )<categorify>
df1 = pd.read_csv(".. /input/nlp-getting-started/test.csv") display(df1.head()) display(df1.shape )
Natural Language Processing with Disaster Tweets
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df_train = reduce_mem_usage(df_train,use_float16=True) building = reduce_mem_usage(building,use_float16=True) weather_train = reduce_mem_usage(weather_train,use_float16=True )<merge>
l=len(df1) display(l) predlist=[] for i in range(l): ct=cleantext.clean(df1.iloc[i,3], clean_all= True) new=predictor.predict(ct) predlist.append(new )
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df_train = df_train.merge(building, left_on='building_id',right_on='building_id',how='left') df_train = df_train.merge(weather_train,how='left',left_on=['site_id','timestamp'],right_on=['site_id','timestamp']) del weather_train gc.collect()<feature_engineering>
df_pred=pd.DataFrame(predlist) df_pred.columns=['target'] frames=[df1,df_pred] df2=pd.concat(frames, axis=1) display(df2.head() )
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%%time df_train = features_engineering(df_train )<prepare_x_and_y>
df2.loc[df2['target']=='target','target']=1 df2.loc[df2['target']=='not_target','target']=0 display(df2['target'].mean()) df2=df2[['id','target']] display(df2.shape) display(df2.head() )
Natural Language Processing with Disaster Tweets
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<split><EOS>
df2.to_csv("submission.csv", index=False )
Natural Language Processing with Disaster Tweets
23,121,360
<SOS> metric: meanfscore Kaggle data source: natural-language-processing-with-disaster-tweets<set_options>
!wget --quiet https://raw.githubusercontent.com/tensorflow/models/master/official/nlp/bert/tokenization.py
Natural Language Processing with Disaster Tweets
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del X_train, y_train gc.collect()<load_from_disk>
import numpy as np import pandas as pd import tensorflow as tf from tensorflow.keras import layers, models, optimizers from tensorflow.keras.callbacks import ModelCheckpoint
Natural Language Processing with Disaster Tweets
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df_test = pd.read_feather('.. /input/ashrae-feather/test.ft') row_ids = df_test["row_id"] df_test.drop("row_id", axis=1, inplace=True) df_test = reduce_mem_usage(df_test )<feature_engineering>
train = pd.read_csv("/kaggle/input/nlp-getting-started/train.csv") test = pd.read_csv("/kaggle/input/nlp-getting-started/test.csv") submission = pd.read_csv("/kaggle/input/nlp-getting-started/sample_submission.csv" )
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<merge>
def bert_encode(texts, tokenizer, max_len): all_tokens = [] all_masks = [] all_segments = [] for text in texts: text = tokenizer.tokenize(text) text = text[:max_len-2] input_sequence = ["[CLS]"] + text + ["[SEP]"] pad_len = max_len - len(input_sequence) tokens = tokenizer.convert_tokens_to_ids(input_sequence) tokens...
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df_test = df_test.merge(building,left_on='building_id',right_on='building_id',how='left') del building gc.collect()<drop_column>
train = train.fillna(' ') test = test.fillna(' ' )
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weather_test = fill_weather_dataset(weather_test) weather_test = reduce_mem_usage(weather_test )<merge>
max_len = 60 module_url = "https://tfhub.dev/tensorflow/bert_en_uncased_L-24_H-1024_A-16/1" bert_layer = hub.KerasLayer(module_url, trainable=True) vocab_file = bert_layer.resolved_object.vocab_file.asset_path.numpy() do_lower_case = bert_layer.resolved_object.do_lower_case.numpy() tokenizer = tokenization.FullTokeniz...
Natural Language Processing with Disaster Tweets
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df_test = df_test.merge(weather_test,how='left',on=['timestamp','site_id']) del weather_test gc.collect()<feature_engineering>
input_word_ids = layers.Input(shape=(max_len,), dtype=tf.int32, name="input_word_ids") input_mask = layers.Input(shape=(max_len,), dtype=tf.int32, name="input_mask") segment_ids = layers.Input(shape=(max_len,), dtype=tf.int32, name="segment_ids") _, sequence_output = bert_layer([input_word_ids, input_mask, segment_i...
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df_test = features_engineering(df_test )<predict_on_test>
checkpoint = ModelCheckpoint('model.h5', monitor='val_loss', save_best_only=True) train_history = model.fit( train_input, train_labels, validation_split=0.2, epochs=3, callbacks=[checkpoint], batch_size=16 )
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%%time pred = [] for model in tqdm(models): if pred == []: pred = np.expm1(model.predict(df_test, num_iteration=model.best_iteration)) / len(models) else: pred += np.expm1(model.predict(df_test, num_iteration=model.best_iteration)) / len(models) del model gc.collect()<load_pretrained>
model.load_weights('model.h5') test_pred = model.predict(test_input )
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<set_options><EOS>
submission['target'] = test_pred.round().astype(int) submission.to_csv('submission.csv', index=False )
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<save_to_csv><EOS>
import pandas as pd
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<SOS> metric: meanfscore Kaggle data source: natural-language-processing-with-disaster-tweets<load_from_disk>
import pandas as pd
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site0 = pd.read_feather('.. /input/ucf-building-meter-reading/site0.ft') df_test = pd.read_feather('.. /input/ashrae-feather/test.ft' )<merge>
train_df = pd.read_csv(".. /input/nlp-getting-started/train.csv") test_df = pd.read_csv('/kaggle/input/nlp-getting-started/test.csv') gt_df = pd.read_csv(".. /input/disasters-on-social-media/socialmedia-disaster-tweets-DFE.csv" )
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merged = df_test.merge(site0, left_on=['building_id', 'meter', 'timestamp'], right_on=['building_id', 'meter', 'timestamp'], how='left' )<prepare_x_and_y>
gt_df = gt_df[['choose_one', 'text']] gt_df['target'] =(gt_df['choose_one']=='Relevant' ).astype(int) gt_df['id'] = gt_df.index gt_df
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ytrue = merged[~merged['meter_reading'].isna() ]['meter_reading'] pred = submission[~merged['meter_reading'].isna() ]['meter_reading']<compute_test_metric>
merged_df = pd.merge(test_df, gt_df, on='id') merged_df
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<load_from_disk><EOS>
subm_df.to_csv('submission.csv', index=False )
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<SOS> metric: meanfscore Kaggle data source: natural-language-processing-with-disaster-tweets<merge>
! pip install tf-models-official==2.4.0 -q ! pip install tensorflow-gpu==2.4.1 -q ! pip install tensorflow-text==2.4.1 -q ! python -m spacy download en_core_web_sm -q ! pip install dataprep | grep -v 'already satisfied'
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merged = df_test.merge(site1, left_on=['building_id', 'meter', 'timestamp'], right_on=['building_id', 'meter', 'timestamp'], how='left' )<prepare_x_and_y>
np.set_printoptions(precision=4) warnings.filterwarnings('ignore' )
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ytrue = merged[~merged['meter_reading'].isna() ]['meter_reading'] pred = submission[~merged['meter_reading'].isna() ]['meter_reading']<compute_test_metric>
tf.__version__
Natural Language Processing with Disaster Tweets
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del site1, merged print(f'RMSLE of buildings 105-155: {rmsle(ytrue, pred):.4f}' )<load_from_disk>
random.seed(319) np.random.seed(319) tf.random.set_seed(319 )
Natural Language Processing with Disaster Tweets
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site2 = pd.read_feather('.. /input/asu-feather/site2.ft') site2 = site2.query('timestamp >= 2017' )<merge>
train_full = pd.read_csv('/kaggle/input/nlp-getting-started/train.csv') test_full = pd.read_csv('/kaggle/input/nlp-getting-started/test.csv') print('Training Set Shape = {}'.format(train_full.shape)) print('Training Set Memory Usage = {:.2f}MB'.format(train_full.memory_usage().sum() /2**20)) print('Test Set Shape = {...
Natural Language Processing with Disaster Tweets
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merged = df_test.merge(site2, left_on=['building_id', 'meter', 'timestamp'], right_on=['building_id', 'meter', 'timestamp'], how='left' )<prepare_x_and_y>
df_train = pd.read_csv("/kaggle/input/disastertweet-prepared2/train_prepared.csv") df_test = pd.read_csv("/kaggle/input/disastertweet-prepared2/test_prepared.csv" )
Natural Language Processing with Disaster Tweets
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ytrue = merged[~merged['meter_reading'].isna() ]['meter_reading'] pred = submission[~merged['meter_reading'].isna() ]['meter_reading']<compute_test_metric>
train_full = clean_text(train_full,'keyword') test_full = clean_text(test_full, 'keyword' )
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del site2, merged print(f'RMSLE of buildings 156-290: {rmsle(ytrue, pred):.4f}' )<load_from_disk>
df_train['keyword'] = train_full['keyword'] df_test['keyword'] = test_full['keyword']
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site4 = pd.read_feather('.. /input/ucb-feather/site4.ft') site4 = site4.query('timestamp >= 2017' )<merge>
nlp_spacy = spacy.load('en_core_web_sm') sentence_enc = hub.load('https://tfhub.dev/google/universal-sentence-encoder/4' )
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merged = df_test.merge(site4, left_on=['building_id', 'timestamp'], right_on=['building_id', 'timestamp'], how='left' )<prepare_x_and_y>
def extract_keywords(text): potential_keywords = [] TOP_KEYWORD = -1 pos_tag = ['ADJ', 'NOUN', 'PROPN'] doc = nlp_spacy(text) for i in doc: if i.pos_ in pos_tag: potential_keywords.append(i.text) document_embed = sentence_enc([text]) potential_embed = sentence_enc(potential_keywords) vector_distances = cosine_simil...
Natural Language Processing with Disaster Tweets
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ytrue = merged[~merged['meter_reading'].isna() ]['meter_reading'] pred = submission[~merged['meter_reading'].isna() ]['meter_reading']<compute_test_metric>
df_train.keyword = pd.DataFrame(list(map(keyword_filler, df_train.keyword, df_train.text)) ).astype(str) df_test.keyword = pd.DataFrame(list(map(keyword_filler, df_test.keyword, df_test.text)) ).astype(str) print('Null Training Keywords => ', df_train['keyword'].isnull().any()) print('Null Test Keywords => ', df_tes...
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del site4, merged print(f'RMSLE of 74/91 buildings : {rmsle(ytrue, pred):.4f}' )<load_from_disk>
X_train, X_val, y_train, y_val = train_test_split(df_train[['text','keyword']], df_train.target, test_size=0.2, random_state=42) X_train.shape, X_val.shape
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site15 = pd.read_feather('.. /input/cornell-feather/site15.ft') site15 = site15.query('timestamp >= 2017') site15 = site15.drop_duplicates()<merge>
train_ds = tf.data.Dataset.from_tensor_slices(( dict(X_train), y_train)) val_ds = tf.data.Dataset.from_tensor_slices(( dict(X_val), y_val)) test_ds = tf.data.Dataset.from_tensor_slices(dict(df_test[['text','keyword']]))
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merged = df_test.merge(site15, left_on=['building_id', 'meter', 'timestamp'], right_on=['building_id', 'meter', 'timestamp'], how='left' )<prepare_x_and_y>
AUTOTUNE = tf.data.experimental.AUTOTUNE BUFFER_SIZE = 1000 BATCH_SIZE = 32 RANDOM_SEED = 319 def configure_dataset(dataset, shuffle=False, test=False): if shuffle: dataset = dataset.cache() \ .shuffle(BUFFER_SIZE, seed=RANDOM_SEED, reshuffle_each_iteration=True)\ .batch(BATCH_SIZE, drop_remainder=True)\ .prefetch(A...
Natural Language Processing with Disaster Tweets
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ytrue = merged[~merged['meter_reading'].isna() ]['meter_reading'] pred = submission[~merged['meter_reading'].isna() ]['meter_reading']<compute_test_metric>
a3 = configure_dataset(train_ds, shuffle=True) dict3 = [] for elem in a3: dict3.append(elem[0]['text'][0]) dict3[:10]
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del site15, merged print(f'RMSLE of buildings 1325-1448: {rmsle(ytrue, pred):.4f}' )<load_from_disk>
train_ds = configure_dataset(train_ds, shuffle=True) val_ds = configure_dataset(val_ds) test_ds = configure_dataset(test_ds, test=True )
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site012 = pd.read_feather('.. /input/comb-leaked-dataset/site012.ft') site012 = site012.query('timestamp >= 2017' )<merge>
del X_train, X_val, y_train, y_val, df_train, df_test, train_full, test_full
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merged = df_test.merge(site012, left_on=['building_id', 'meter', 'timestamp'], right_on=['building_id', 'meter', 'timestamp'], how='left' )<prepare_x_and_y>
bert_encoder_path = "https://tfhub.dev/tensorflow/bert_en_uncased_L-12_H-768_A-12/4" bert_preprocessor_path = "https://tfhub.dev/tensorflow/bert_en_uncased_preprocess/3" keyword_embedding_path = "https://tfhub.dev/google/nnlm-en-dim128-with-normalization/2"
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ytrue = merged[~merged['meter_reading'].isna() ]['meter_reading'] pred = submission[~merged['meter_reading'].isna() ]['meter_reading']<compute_test_metric>
bert_encoder = hub.KerasLayer(bert_encoder_path, trainable=True, name="BERT_Encoder") bert_preprocessor = hub.KerasLayer(bert_preprocessor_path, name="BERT_Preprocessor") nnlm_embed = hub.KerasLayer(keyword_embedding_path, name="NNLM_Embedding" )
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del site012, merged gc.collect() print(f'RMSLE of buildings 0-290: {rmsle(ytrue, pred):.4f}' )<define_variables>
kernel_initializer = tf.keras.initializers.GlorotNormal(seed=319) def create_model() : text_input = Input(shape=() , dtype=tf.string, name="text") encoder_inputs = bert_preprocessor(text_input) encoder_outputs = bert_encoder(encoder_inputs) pooled_output = encoder_outputs["pooled_output"] bert_branch = Dropout(0.1,...
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path_data = "/kaggle/input/ashrae-energy-prediction/" path_train = path_data + "train.csv" path_test = path_data + "test.csv" path_building = path_data + "building_metadata.csv" path_weather_train = path_data + "weather_train.csv" path_weather_test = path_data + "weather_test.csv" path_drops = path_data + ".. /lier-lis...
EPOCHS = 3 LEARNING_RATE = 5e-5 STEPS_PER_EPOCH = int(train_ds.unbatch().cardinality().numpy() / BATCH_SIZE) VAL_STEPS = int(val_ds.unbatch().cardinality().numpy() / BATCH_SIZE) TRAIN_STEPS = STEPS_PER_EPOCH * EPOCHS WARMUP_STEPS = int(TRAIN_STEPS * 0.1) adamw_optimizer = create_optimizer( init_lr=LEARNING_RATE, nu...
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df_train = pd.read_csv(path_train) building = pd.read_csv(path_building) le = LabelEncoder() building.primary_use = le.fit_transform(building.primary_use) weather_train = pd.read_csv(path_weather_train) bad_rows = pd.read_csv(path_drops) df_train = df_train.drop(index=bad_rows["0"] )<set_options>
bert_classifier.compile(loss=BinaryCrossentropy(from_logits=True), optimizer=adamw_optimizer, metrics=[BinaryAccuracy(name="accuracy")] ) history = bert_classifier.fit(train_ds, epochs=EPOCHS, steps_per_epoch=STEPS_PER_EPOCH, validation_data=val_ds, validation_steps=VAL_STEPS )
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def reduce_mem_usage(df, use_float16=False): start_mem = df.memory_usage().sum() / 1024**2 print("Memory usage of dataframe is {:.2f} MB".format(start_mem)) for col in df.columns: if is_datetime(df[col])or is_categorical_dtype(df[col]): continue col_type = df[col].dtype if col_type != object: c_min = df[col].min() c_...
def submission(model, test): sample_sub = pd.read_csv('/kaggle/input/nlp-getting-started/sample_submission.csv') predictions = model.predict(test) y_preds = [ int(i)for i in np.rint(predictions)] sub = pd.DataFrame({'id':sample_sub['id'].values.tolist() ,'target':y_preds}) sub.to_csv('submission.csv', index=False )
Natural Language Processing with Disaster Tweets