kejian/codesearchnet-python-linelen40-full

text stringlengths 89 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 630
def set_who(voevent, date=None, author_ivorn=None): """Sets the minimal 'Who' attributes: date of authoring, AuthorIVORN. Args: voevent(:class:`Voevent`): Root node of a VOEvent etree. date(datetime.datetime): Date of authoring. NB Microseconds are ignored, as per the VOEvent spec....	[ "def", "set_who", "(", "voevent", ",", "date", "=", "None", ",", "author_ivorn", "=", "None", ")", ":", "if", "author_ivorn", "is", "not", "None", ":", "voevent", ".", "Who", ".", "AuthorIVORN", "=", "''", ".", "join", "(", "(", "'ivo://'", ",", "aut...	42.5625	19.375
def with_metaclass(meta, *bases): """copied from https://github.com/Byron/bcore/blob/master/src/python/butility/future.py#L15""" class metaclass(meta): __call__ = type.__call__ __init__ = type.__init__ def __new__(cls, name, nbases, d): if nbases is None: ret...	[ "def", "with_metaclass", "(", "meta", ",", "*", "bases", ")", ":", "class", "metaclass", "(", "meta", ")", ":", "__call__", "=", "type", ".", "__call__", "__init__", "=", "type", ".", "__init__", "def", "__new__", "(", "cls", ",", "name", ",", "nbases"...	46.733333	14.6
def draw(self, data): """Display decoded characters at the current cursor position and advances the cursor if :data:`~pyte.modes.DECAWM` is set. :param str data: text to display. .. versionchanged:: 0.5.0 Character width is taken into account. Specifically, zero-width ...	[ "def", "draw", "(", "self", ",", "data", ")", ":", "data", "=", "data", ".", "translate", "(", "self", ".", "g1_charset", "if", "self", ".", "charset", "else", "self", ".", "g0_charset", ")", "for", "char", "in", "data", ":", "char_width", "=", "wcwi...	46.742424	21.969697
def vcenter_connect(self): """ Attempt to connect to vCenter :return: """ try: si = SmartConnect( host=self.host, user=self.user, pwd=self.password, port=self.port) # disconnect vc ...	[ "def", "vcenter_connect", "(", "self", ")", ":", "try", ":", "si", "=", "SmartConnect", "(", "host", "=", "self", ".", "host", ",", "user", "=", "self", ".", "user", ",", "pwd", "=", "self", ".", "password", ",", "port", "=", "self", ".", "port", ...	29.411765	12.235294
def refresh_image(self): """Get the most recent camera image.""" url = str.replace(CONST.TIMELINE_IMAGES_ID_URL, '$DEVID$', self.device_id) response = self._abode.send_request("get", url) _LOGGER.debug("Get image response: %s", response.text) return se...	[ "def", "refresh_image", "(", "self", ")", ":", "url", "=", "str", ".", "replace", "(", "CONST", ".", "TIMELINE_IMAGES_ID_URL", ",", "'$DEVID$'", ",", "self", ".", "device_id", ")", "response", "=", "self", ".", "_abode", ".", "send_request", "(", "\"get\""...	40.333333	20.888889
def docx_text_from_xml(xml: str, config: TextProcessingConfig) -> str: """ Converts an XML tree of a DOCX file to string contents. Args: xml: raw XML text config: :class:`TextProcessingConfig` control object Returns: contents as a string """ root = ElementTree.fromstrin...	[ "def", "docx_text_from_xml", "(", "xml", ":", "str", ",", "config", ":", "TextProcessingConfig", ")", "->", "str", ":", "root", "=", "ElementTree", ".", "fromstring", "(", "xml", ")", "return", "docx_text_from_xml_node", "(", "root", ",", "0", ",", "config",...	28.153846	19.076923
def visit(self, node): '''The main visit function. Visits the passed-in node and calls finalize. ''' for token in self.itervisit(node): pass result = self.finalize() if result is not self: return result	[ "def", "visit", "(", "self", ",", "node", ")", ":", "for", "token", "in", "self", ".", "itervisit", "(", "node", ")", ":", "pass", "result", "=", "self", ".", "finalize", "(", ")", "if", "result", "is", "not", "self", ":", "return", "result" ]	29.555556	17.777778
def _deep_tuple(self, x): """Converts nested `tuple`, `list`, or `dict` to nested `tuple`.""" if isinstance(x, dict): return self._deep_tuple(tuple(sorted(x.items()))) elif isinstance(x, (list, tuple)): return tuple(map(self._deep_tuple, x)) return x	[ "def", "_deep_tuple", "(", "self", ",", "x", ")", ":", "if", "isinstance", "(", "x", ",", "dict", ")", ":", "return", "self", ".", "_deep_tuple", "(", "tuple", "(", "sorted", "(", "x", ".", "items", "(", ")", ")", ")", ")", "elif", "isinstance", ...	34	14.625
def putkeyword(self, keyword, value, makesubrecord=False): """Put the value of a column keyword. (see :func:`table.putcolkeyword`)""" return self._table.putcolkeyword(self._column, keyword, value, makesubrecord)	[ "def", "putkeyword", "(", "self", ",", "keyword", ",", "value", ",", "makesubrecord", "=", "False", ")", ":", "return", "self", ".", "_table", ".", "putcolkeyword", "(", "self", ".", "_column", ",", "keyword", ",", "value", ",", "makesubrecord", ")" ]	58	15.75
def get_config(self, key_name): """ Return configuration value Args: key_name (str): configuration key Returns: The value for the specified configuration key, or if not found in the config the default value specified in the Configuration Handler ...	[ "def", "get_config", "(", "self", ",", "key_name", ")", ":", "if", "key_name", "in", "self", ".", "config", ":", "return", "self", ".", "config", ".", "get", "(", "key_name", ")", "return", "self", ".", "Configuration", ".", "default", "(", "key_name", ...	31.6875	19.1875
def find_gui_and_backend(gui=None): """Given a gui string return the gui and mpl backend. Parameters ---------- gui : str Can be one of ('tk','gtk','wx','qt','qt4','inline'). Returns ------- A tuple of (gui, backend) where backend is one of ('TkAgg','GTKAgg', 'WXAgg','Qt4Agg','...	[ "def", "find_gui_and_backend", "(", "gui", "=", "None", ")", ":", "import", "matplotlib", "if", "gui", "and", "gui", "!=", "'auto'", ":", "# select backend based on requested gui", "backend", "=", "backends", "[", "gui", "]", "else", ":", "backend", "=", "matp...	30.56	22.32
def cancel(self, campaign_id): """ Cancel a Regular or Plain-Text Campaign after you send, before all of your recipients receive it. This feature is included with MailChimp Pro. :param campaign_id: The unique id for the campaign. :type campaign_id: :py:class:`str` ...	[ "def", "cancel", "(", "self", ",", "campaign_id", ")", ":", "self", ".", "campaign_id", "=", "campaign_id", "return", "self", ".", "_mc_client", ".", "_post", "(", "url", "=", "self", ".", "_build_path", "(", "campaign_id", ",", "'actions/cancel-send'", ")",...	40.818182	20.636364
def to_dict(self): '''Save this preceding condition into a dictionary.''' d = super(Preceding, self).to_dict() e = {} if self.timeout != 0: e['timeout'] = self.timeout if self.sending_timing: e['sendingTiming'] = self.sending_timing pcs = [] ...	[ "def", "to_dict", "(", "self", ")", ":", "d", "=", "super", "(", "Preceding", ",", "self", ")", ".", "to_dict", "(", ")", "e", "=", "{", "}", "if", "self", ".", "timeout", "!=", "0", ":", "e", "[", "'timeout'", "]", "=", "self", ".", "timeout",...	33.333333	12.8
def diet_expert(x, hidden_size, params): """A two-layer feed-forward network with relu activation on hidden layer. Uses diet variables. Recomputes hidden layer on backprop to save activation memory. Args: x: a Tensor with shape [batch, io_size] hidden_size: an integer params: a diet variable HPara...	[ "def", "diet_expert", "(", "x", ",", "hidden_size", ",", "params", ")", ":", "@", "fn_with_diet_vars", "(", "params", ")", "def", "diet_expert_internal", "(", "x", ")", ":", "dim", "=", "x", ".", "get_shape", "(", ")", ".", "as_list", "(", ")", "[", ...	28.708333	18.291667
def _handle_root(): """Handles index.html requests.""" res_filename = os.path.join( os.path.dirname(__file__), _PROFILE_HTML) with io.open(res_filename, 'rb') as res_file: content = res_file.read() return content, 'text/html'	[ "def", "_handle_root", "(", ")", ":", "res_filename", "=", "os", ".", "path", ".", "join", "(", "os", ".", "path", ".", "dirname", "(", "__file__", ")", ",", "_PROFILE_HTML", ")", "with", "io", ".", "open", "(", "res_filename", ",", "'rb'", ")", "as"...	39.285714	8.428571
def set_color_in_grid(self, color_in_grid): """Set the pixel at the position of the :paramref:`color_in_grid` to its color. :param color_in_grid: must have the following attributes: - ``color`` is the :ref:`color <png-color>` to set the pixel to - ``x`` is the x position of...	[ "def", "set_color_in_grid", "(", "self", ",", "color_in_grid", ")", ":", "self", ".", "_set_pixel_and_convert_color", "(", "color_in_grid", ".", "x", ",", "color_in_grid", ".", "y", ",", "color_in_grid", ".", "color", ")" ]	39.714286	19.285714
async def set_max_relative_mod(self, max_mod, timeout=OTGW_DEFAULT_TIMEOUT): """ Override the maximum relative modulation from the thermostat. Valid values are 0 through 100. Clear the setting by specifying a non-numeric value. Return the newly ...	[ "async", "def", "set_max_relative_mod", "(", "self", ",", "max_mod", ",", "timeout", "=", "OTGW_DEFAULT_TIMEOUT", ")", ":", "if", "isinstance", "(", "max_mod", ",", "int", ")", "and", "not", "0", "<=", "max_mod", "<=", "100", ":", "return", "None", "cmd", ...	37.083333	16.333333
def install_caller_instruction(self, token_type="Unrestricted", transaction_id=None): """ Set us up as a caller This will install a new caller_token into the FPS section. This should really only be called to regenerate the caller token. """ ...	[ "def", "install_caller_instruction", "(", "self", ",", "token_type", "=", "\"Unrestricted\"", ",", "transaction_id", "=", "None", ")", ":", "response", "=", "self", ".", "install_payment_instruction", "(", "\"MyRole=='Caller';\"", ",", "token_type", "=", "token_type",...	46.68	18.04
def OnViewFrozen(self, event): """Show cells as frozen status""" self.grid._view_frozen = not self.grid._view_frozen self.grid.grid_renderer.cell_cache.clear() self.grid.ForceRefresh() event.Skip()	[ "def", "OnViewFrozen", "(", "self", ",", "event", ")", ":", "self", ".", "grid", ".", "_view_frozen", "=", "not", "self", ".", "grid", ".", "_view_frozen", "self", ".", "grid", ".", "grid_renderer", ".", "cell_cache", ".", "clear", "(", ")", "self", "....	25.777778	20.777778
def smiles_to_compound(smiles, assign_descriptors=True): """Convert SMILES text to compound object Raises: ValueError: SMILES with unsupported format """ it = iter(smiles) mol = molecule() try: for token in it: mol(token) result, _ = mol(None) except ...	[ "def", "smiles_to_compound", "(", "smiles", ",", "assign_descriptors", "=", "True", ")", ":", "it", "=", "iter", "(", "smiles", ")", "mol", "=", "molecule", "(", ")", "try", ":", "for", "token", "in", "it", ":", "mol", "(", "token", ")", "result", ",...	27.684211	16.105263
def write_switch(self, module_address, state, callback_fn): """Set relay state.""" _LOGGER.info("write_switch: setstate,{},{}{}" .format(module_address, str(state), chr(13))) self.subscribe("state," + module_address, callback_fn) self.send("setstate,{},{}{}" ...	[ "def", "write_switch", "(", "self", ",", "module_address", ",", "state", ",", "callback_fn", ")", ":", "_LOGGER", ".", "info", "(", "\"write_switch: setstate,{},{}{}\"", ".", "format", "(", "module_address", ",", "str", "(", "state", ")", ",", "chr", "(", "1...	53.571429	15.714286
def xmlobject_to_dict(instance, fields=None, exclude=None, prefix=''): """ Generate a dictionary based on the data in an XmlObject instance to pass as a Form's ``initial`` keyword argument. :param instance: instance of :class:`~eulxml.xmlmap.XmlObject` :param fields: optional list of fields - if sp...	[ "def", "xmlobject_to_dict", "(", "instance", ",", "fields", "=", "None", ",", "exclude", "=", "None", ",", "prefix", "=", "''", ")", ":", "data", "=", "{", "}", "# convert prefix to combining form for convenience", "if", "prefix", ":", "prefix", "=", "'%s-'", ...	40.263158	20.263158
def write_outro (self): """Write outro comments.""" self.stoptime = time.time() duration = self.stoptime - self.starttime self.comment(_("Stopped checking at %(time)s (%(duration)s)") % {"time": strformat.strtime(self.stoptime), "duration": strformat.strduratio...	[ "def", "write_outro", "(", "self", ")", ":", "self", ".", "stoptime", "=", "time", ".", "time", "(", ")", "duration", "=", "self", ".", "stoptime", "-", "self", ".", "starttime", "self", ".", "comment", "(", "_", "(", "\"Stopped checking at %(time)s (%(dur...	47.428571	14.428571
def create_volume(self, volume_name: str, driver_spec: str = None): """Create new docker volumes. Only the manager nodes can create a volume Args: volume_name (string): Name for the new docker volume driver_spec (string): Driver for the docker volume """ ...	[ "def", "create_volume", "(", "self", ",", "volume_name", ":", "str", ",", "driver_spec", ":", "str", "=", "None", ")", ":", "# Default values", "if", "driver_spec", ":", "driver", "=", "driver_spec", "else", ":", "driver", "=", "'local'", "# Raise an exception...	32.904762	20.904762
def model_eval(sess, x, y, predictions, X_test=None, Y_test=None, feed=None, args=None): """ Compute the accuracy of a TF model on some data :param sess: TF session to use :param x: input placeholder :param y: output placeholder (for labels) :param predictions: model output predictions :par...	[ "def", "model_eval", "(", "sess", ",", "x", ",", "y", ",", "predictions", ",", "X_test", "=", "None", ",", "Y_test", "=", "None", ",", "feed", "=", "None", ",", "args", "=", "None", ")", ":", "global", "_model_eval_cache", "args", "=", "_ArgsWrapper", ...	35.891892	16.243243
def initialize_worker(self, process_num=None): """ reinitialize consumer for process in multiprocesing """ self.initialize(self.grid, self.num_of_paths, self.seed)	[ "def", "initialize_worker", "(", "self", ",", "process_num", "=", "None", ")", ":", "self", ".", "initialize", "(", "self", ".", "grid", ",", "self", ".", "num_of_paths", ",", "self", ".", "seed", ")" ]	38.2	9.8
def add_alias(self, entry): """ Adds id to the current list 'aliased_by' """ assert isinstance(entry, SymbolVAR) self.aliased_by.append(entry)	[ "def", "add_alias", "(", "self", ",", "entry", ")", ":", "assert", "isinstance", "(", "entry", ",", "SymbolVAR", ")", "self", ".", "aliased_by", ".", "append", "(", "entry", ")" ]	34	3.8
def group_id(self): """ Returns the @GROUPID. If derived_from is set, returns that group_id. """ if self.derived_from is not None: return self.derived_from.group_id() if self.file_uuid is None: return None return utils.GROUP_ID_PREFIX + se...	[ "def", "group_id", "(", "self", ")", ":", "if", "self", ".", "derived_from", "is", "not", "None", ":", "return", "self", ".", "derived_from", ".", "group_id", "(", ")", "if", "self", ".", "file_uuid", "is", "None", ":", "return", "None", "return", "uti...	29.272727	11.818182
def getLeastUsedCell(self, c): """For the least used cell in a column""" segmentsPerCell = numpy.zeros(self.cellsPerColumn, dtype='uint32') for i in range(self.cellsPerColumn): segmentsPerCell[i] = self.getNumSegmentsInCell(c,i) cellMinUsage = numpy.where(segmentsPerCell==segmentsPerCell.min())[0...	[ "def", "getLeastUsedCell", "(", "self", ",", "c", ")", ":", "segmentsPerCell", "=", "numpy", ".", "zeros", "(", "self", ".", "cellsPerColumn", ",", "dtype", "=", "'uint32'", ")", "for", "i", "in", "range", "(", "self", ".", "cellsPerColumn", ")", ":", ...	46.416667	21
def delete_free_shipping_promotion_by_id(cls, free_shipping_promotion_id, **kwargs): """Delete FreeShippingPromotion Delete an instance of FreeShippingPromotion by its ID. This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async=Tr...	[ "def", "delete_free_shipping_promotion_by_id", "(", "cls", ",", "free_shipping_promotion_id", ",", "", "", "kwargs", ")", ":", "kwargs", "[", "'_return_http_data_only'", "]", "=", "True", "if", "kwargs", ".", "get", "(", "'async'", ")", ":", "return", "cls", ...	49.809524	27.809524
def make_ring_dict(self, galkey): """ Make a dictionary mapping the merged component names to list of template files Parameters ---------- galkey : str Unique key for this ring dictionary Returns `model_component.GalpropMergedRingInfo` """ galprop_r...	[ "def", "make_ring_dict", "(", "self", ",", "galkey", ")", ":", "galprop_rings", "=", "self", ".", "read_galprop_rings_yaml", "(", "galkey", ")", "galprop_run", "=", "galprop_rings", "[", "'galprop_run'", "]", "ring_limits", "=", "galprop_rings", "[", "'ring_limits...	46.486486	19.054054
def compile(self): """ Build the abstract Parsley tree starting from the root node (recursive) """ if not isinstance(self.parselet, dict): raise ValueError("Parselet must be a dict of some sort. Or use .from_jsonstring(), " \ ".from_jsonfile(), .from_y...	[ "def", "compile", "(", "self", ")", ":", "if", "not", "isinstance", "(", "self", ".", "parselet", ",", "dict", ")", ":", "raise", "ValueError", "(", "\"Parselet must be a dict of some sort. Or use .from_jsonstring(), \"", "\".from_jsonfile(), .from_yamlstring(), or .from_ya...	44.888889	20.888889
def hume_process_jsonld(): """Process Hume JSON-LD and return INDRA Statements.""" if request.method == 'OPTIONS': return {} response = request.body.read().decode('utf-8') body = json.loads(response) jsonld_str = body.get('jsonld') jsonld = json.loads(jsonld_str) hp = hume.process_js...	[ "def", "hume_process_jsonld", "(", ")", ":", "if", "request", ".", "method", "==", "'OPTIONS'", ":", "return", "{", "}", "response", "=", "request", ".", "body", ".", "read", "(", ")", ".", "decode", "(", "'utf-8'", ")", "body", "=", "json", ".", "lo...	35.5	8.4
def permissions_for(self, member): """Handles permission resolution for the current :class:`Member`. This function takes into consideration the following cases: - Guild owner - Guild roles - Channel overrides - Member overrides Parameters ---------- ...	[ "def", "permissions_for", "(", "self", ",", "member", ")", ":", "# The current cases can be explained as:", "# Guild owner get all permissions -- no questions asked. Otherwise...", "# The @everyone role gets the first application.", "# After that, the applied roles that the user has in the cha...	36.663366	20.623762
def rmse(self): """Get RMSE for regression model evaluation results. Returns: the RMSE float number. Raises: Exception if the CSV headers do not include 'target' or 'predicted', or BigQuery does not return 'target' or 'predicted' column, or if target or predicted is not number. ...	[ "def", "rmse", "(", "self", ")", ":", "if", "self", ".", "_input_csv_files", ":", "df", "=", "self", ".", "_get_data_from_csv_files", "(", ")", "if", "'target'", "not", "in", "df", "or", "'predicted'", "not", "in", "df", ":", "raise", "ValueError", "(", ...	33.483871	22.580645
def user_with_name(self, given_name=None, sn=None): """Get a unique user object by given name (first/nickname and last).""" results = [] if sn and not given_name: results = User.objects.filter(last_name=sn) elif given_name: query = {'first_name': given_name} ...	[ "def", "user_with_name", "(", "self", ",", "given_name", "=", "None", ",", "sn", "=", "None", ")", ":", "results", "=", "[", "]", "if", "sn", "and", "not", "given_name", ":", "results", "=", "User", ".", "objects", ".", "filter", "(", "last_name", "=...	32.772727	15.727273
def register_alias(self, alias, key): """Aliases provide another accessor for the same key. This enables one to change a name without breaking the application. """ alias = alias.lower() key = key.lower() if alias != key and alias != self._real_key(key): exists...	[ "def", "register_alias", "(", "self", ",", "alias", ",", "key", ")", ":", "alias", "=", "alias", ".", "lower", "(", ")", "key", "=", "key", ".", "lower", "(", ")", "if", "alias", "!=", "key", "and", "alias", "!=", "self", ".", "_real_key", "(", "...	41.647059	14.470588
def as_dict(self): """ Serializes the object necessary data in a dictionary. :returns: Serialized data in a dictionary. :rtype: dict """ result_dict = super(Profile, self).as_dict() statuses = list() version = None titles = list() descri...	[ "def", "as_dict", "(", "self", ")", ":", "result_dict", "=", "super", "(", "Profile", ",", "self", ")", ".", "as_dict", "(", ")", "statuses", "=", "list", "(", ")", "version", "=", "None", "titles", "=", "list", "(", ")", "descriptions", "=", "list",...	31.888889	13.355556
def _set_field(self, fieldname, bytestring, transfunc=None): """convienience function to set fields of the tinytag by name. the payload (bytestring) can be changed using the transfunc""" if getattr(self, fieldname): # do not overwrite existing data return value = bytestring ...	[ "def", "_set_field", "(", "self", ",", "fieldname", ",", "bytestring", ",", "transfunc", "=", "None", ")", ":", "if", "getattr", "(", "self", ",", "fieldname", ")", ":", "# do not overwrite existing data", "return", "value", "=", "bytestring", "if", "transfunc...	51.1	18.5
def update_parent_sequence_map(child_part, delete=False): """Updates the child map of a simple sequence assessment assessment part""" if child_part.has_parent_part(): object_map = child_part.get_assessment_part()._my_map database = 'assessment_authoring' collection_type = 'AssessmentPart...	[ "def", "update_parent_sequence_map", "(", "child_part", ",", "delete", "=", "False", ")", ":", "if", "child_part", ".", "has_parent_part", "(", ")", ":", "object_map", "=", "child_part", ".", "get_assessment_part", "(", ")", ".", "_my_map", "database", "=", "'...	46.2	11.85
def file_handler(self, handler_type, path, prefixed_path, source_storage): """ Create a dict with all kwargs of the `copy_file` or `link_file` method of the super class and add it to the queue for later processing. """ if self.faster: if prefixed_path not in self.foun...	[ "def", "file_handler", "(", "self", ",", "handler_type", ",", "path", ",", "prefixed_path", ",", "source_storage", ")", ":", "if", "self", ".", "faster", ":", "if", "prefixed_path", "not", "in", "self", ".", "found_files", ":", "self", ".", "found_files", ...	41.571429	20.047619
def count_het(self, allele=None, axis=None): """Count heterozygous genotypes. Parameters ---------- allele : int, optional Allele index. axis : int, optional Axis over which to count, or None to perform overall count. """ b = self.is_het(...	[ "def", "count_het", "(", "self", ",", "allele", "=", "None", ",", "axis", "=", "None", ")", ":", "b", "=", "self", ".", "is_het", "(", "allele", "=", "allele", ")", "return", "np", ".", "sum", "(", "b", ",", "axis", "=", "axis", ")" ]	27.538462	15.615385
def get_all(self, collection_name, since=None): """ method returns all job records from a particular collection that are older than <since> """ if since is None: query = {} else: query = {job.TIMEPERIOD: {'$gte': since}} collection = self.ds.connection(collection_...	[ "def", "get_all", "(", "self", ",", "collection_name", ",", "since", "=", "None", ")", ":", "if", "since", "is", "None", ":", "query", "=", "{", "}", "else", ":", "query", "=", "{", "job", ".", "TIMEPERIOD", ":", "{", "'$gte'", ":", "since", "}", ...	47.5	20.583333
def create_choice(choice_list, help_string=NO_HELP, default=NO_DEFAULT): # type: (List[str], str, Union[Any, NO_DEFAULT_TYPE]) -> str """ Create a choice config :param choice_list: :param help_string: :param default: :return: """ # noinspection PyT...	[ "def", "create_choice", "(", "choice_list", ",", "help_string", "=", "NO_HELP", ",", "default", "=", "NO_DEFAULT", ")", ":", "# type: (List[str], str, Union[Any, NO_DEFAULT_TYPE]) -> str", "# noinspection PyTypeChecker", "return", "ParamChoice", "(", "help_string", "=", "he...	30.466667	13.666667
def create_parser(subparsers): ''' :param subparsers: :return: ''' parser = subparsers.add_parser( 'restart', help='Restart a topology', usage="%(prog)s [options] cluster/[role]/[env] <topology-name> [container-id]", add_help=True) args.add_titles(parser) args.add_cluster_role_env...	[ "def", "create_parser", "(", "subparsers", ")", ":", "parser", "=", "subparsers", ".", "add_parser", "(", "'restart'", ",", "help", "=", "'Restart a topology'", ",", "usage", "=", "\"%(prog)s [options] cluster/[role]/[env] <topology-name> [container-id]\"", ",", "add_help...	22.5	22.142857
def compile_patterns_in_dictionary(dictionary): """ Replace all strings in dictionary with compiled version of themselves and return dictionary. """ for key, value in dictionary.items(): if isinstance(value, str): dictionary[key] = re.compile(value) elif isinstance(value,...	[ "def", "compile_patterns_in_dictionary", "(", "dictionary", ")", ":", "for", "key", ",", "value", "in", "dictionary", ".", "items", "(", ")", ":", "if", "isinstance", "(", "value", ",", "str", ")", ":", "dictionary", "[", "key", "]", "=", "re", ".", "c...	35.363636	6.454545
def add_grid(self): """Add axis and ticks to figure. Notes ----- I know that visvis and pyqtgraphs can do this in much simpler way, but those packages create too large a padding around the figure and this is pretty fast. """ value = self.config.value ...	[ "def", "add_grid", "(", "self", ")", ":", "value", "=", "self", ".", "config", ".", "value", "# X-AXIS", "# x-bottom", "self", ".", "scene", ".", "addLine", "(", "value", "[", "'x_min'", "]", ",", "value", "[", "'y_min'", "]", ",", "value", "[", "'x_...	43.25	18.1875
def terminate(self, sigkill=False): """ Terminate (and then kill) the process launched to process the file. :param sigkill: whether to issue a SIGKILL if SIGTERM doesn't work. :type sigkill: bool """ if self._process is None: raise AirflowException("Tried to ...	[ "def", "terminate", "(", "self", ",", "sigkill", "=", "False", ")", ":", "if", "self", ".", "_process", "is", "None", ":", "raise", "AirflowException", "(", "\"Tried to call stop before starting!\"", ")", "# The queue will likely get corrupted, so remove the reference", ...	42.588235	16.588235
def time_boxed(func, iterable, time_budget, *args): """ Apply a function to the items of an iterable within a given time budget. Loop the given iterable, calling the given function on each item. The expended time is compared to the given time budget after each iteration. """ time_budget = time_...	[ "def", "time_boxed", "(", "func", ",", "iterable", ",", "time_budget", ",", "*", "args", ")", ":", "time_budget", "=", "time_budget", "/", "1000", "# budget in milliseconds", "start", "=", "time", ".", "time", "(", ")", "for", "thing", "in", "iterable", ":...	36	21.777778
def detect_and_decorate(decorator, args, kwargs): """ Helper for applying a decorator when it is applied directly, and also applying it when it is given arguments and then applied to a function. """ # special behavior when invoked with only one non-keyword argument: act as # a normal decorator, ...	[ "def", "detect_and_decorate", "(", "decorator", ",", "args", ",", "kwargs", ")", ":", "# special behavior when invoked with only one non-keyword argument: act as", "# a normal decorator, decorating and returning that argument with", "# click.option", "if", "len", "(", "args", ")", ...	40.148148	22.666667
def try_except_handler(self, node): """Handler for try except statement to ignore excepted exceptions.""" # List all excepted exception's names excepted_types = [] for handler in node.handlers: if handler.type is None: excepted_types = None bre...	[ "def", "try_except_handler", "(", "self", ",", "node", ")", ":", "# List all excepted exception's names", "excepted_types", "=", "[", "]", "for", "handler", "in", "node", ".", "handlers", ":", "if", "handler", ".", "type", "is", "None", ":", "excepted_types", ...	38	18.970588
def seed_response(self, command, response): # type: (Text, dict) -> MockAdapter """ Sets the response that the adapter will return for the specified command. You can seed multiple responses per command; the adapter will put them into a FIFO queue. When a request comes i...	[ "def", "seed_response", "(", "self", ",", "command", ",", "response", ")", ":", "# type: (Text, dict) -> MockAdapter", "if", "command", "not", "in", "self", ".", "responses", ":", "self", ".", "responses", "[", "command", "]", "=", "deque", "(", ")", "self",...	32.571429	21.214286
def set_stack(self, stack_dump, stack_top): """ Stack dump is a dump of the stack from gdb, i.e. the result of the following gdb command : ``dump binary memory [stack_dump] [begin_addr] [end_addr]`` We set the stack to the same addresses as the gdb session to avoid pointers corruption....	[ "def", "set_stack", "(", "self", ",", "stack_dump", ",", "stack_top", ")", ":", "data", "=", "self", ".", "_read_data", "(", "stack_dump", ")", "self", ".", "real_stack_top", "=", "stack_top", "addr", "=", "stack_top", "-", "len", "(", "data", ")", "# Ad...	46.235294	24.941176
def _authenticate(secrets_file): """Runs the OAuth 2.0 installed application flow. Returns: An authorized httplib2.Http instance. """ flow = oauthclient.flow_from_clientsecrets( secrets_file, scope=OAUTH_SCOPE, message=('Failed to initialized OAuth 2.0 flow with secrets ' ...	[ "def", "_authenticate", "(", "secrets_file", ")", ":", "flow", "=", "oauthclient", ".", "flow_from_clientsecrets", "(", "secrets_file", ",", "scope", "=", "OAUTH_SCOPE", ",", "message", "=", "(", "'Failed to initialized OAuth 2.0 flow with secrets '", "'file: %s'", "%",...	38.352941	15.294118
def patch_data(data, L=100, try_diag=True, verbose=False): '''Patch ``data`` (for example Markov chain output) into parts of length ``L``. Return a Gaussian mixture where each component gets the empirical mean and covariance of one patch. :param data: Matrix-like array; the points to be patche...	[ "def", "patch_data", "(", "data", ",", "L", "=", "100", ",", "try_diag", "=", "True", ",", "verbose", "=", "False", ")", ":", "# patch data into length L patches", "patches", "=", "_np", ".", "array", "(", "[", "data", "[", "patch_start", ":", "patch_start...	36.910448	23.119403
def build_trading_timeline(start, end): ''' Build the daily-based index we will trade on ''' EMPTY_DATES = pd.date_range('2000/01/01', periods=0, tz=pytz.utc) now = dt.datetime.now(tz=pytz.utc) if not start: if not end: # Live trading until the end of the day bt_dates = ...	[ "def", "build_trading_timeline", "(", "start", ",", "end", ")", ":", "EMPTY_DATES", "=", "pd", ".", "date_range", "(", "'2000/01/01'", ",", "periods", "=", "0", ",", "tz", "=", "pytz", ".", "utc", ")", "now", "=", "dt", ".", "datetime", ".", "now", "...	39.096774	13.645161
def find_urls(thing, base_url=None, mimetype=None, log=False): """ This function uses several methods to extract URLs from 'thing', which can be a string or raw bytes. If you supply the base URL, it will attempt to use it with urljoin to create full URLs from relative paths. """ if log: logging...	[ "def", "find_urls", "(", "thing", ",", "base_url", "=", "None", ",", "mimetype", "=", "None", ",", "log", "=", "False", ")", ":", "if", "log", ":", "logging", ".", "basicConfig", "(", "level", "=", "logging", ".", "INFO", ",", "format", "=", "'%(asct...	38.128342	24.144385
def change_keyboard_control(self, onerror = None, **keys): """Change the parameters provided as keyword arguments: key_click_percent The volume of key clicks between 0 (off) and 100 (load). -1 will restore default setting. bell_percent The base volume of the ...	[ "def", "change_keyboard_control", "(", "self", ",", "onerror", "=", "None", ",", "", "", "keys", ")", ":", "request", ".", "ChangeKeyboardControl", "(", "display", "=", "self", ".", "display", ",", "onerror", "=", "onerror", ",", "attrs", "=", "keys", ...	42.551724	22.37931
def cli(env): """List object storage accounts.""" mgr = SoftLayer.ObjectStorageManager(env.client) accounts = mgr.list_accounts() table = formatting.Table(['id', 'name', 'apiType']) table.sortby = 'id' api_type = None for account in accounts: if 'vendorName' in account and account['...	[ "def", "cli", "(", "env", ")", ":", "mgr", "=", "SoftLayer", ".", "ObjectStorageManager", "(", "env", ".", "client", ")", "accounts", "=", "mgr", ".", "list_accounts", "(", ")", "table", "=", "formatting", ".", "Table", "(", "[", "'id'", ",", "'name'",...	27.952381	19.904762
def app_trim_memory(self, pid: int or str, level: str = 'RUNNING_LOW') -> None: '''Trim memory. Args: level: HIDDEN \| RUNNING_MODERATE \| BACKGROUNDRUNNING_LOW \| \ MODERATE \| RUNNING_CRITICAL \| COMPLETE ''' _, error = self._execute('-s', self.device_sn, '...	[ "def", "app_trim_memory", "(", "self", ",", "pid", ":", "int", "or", "str", ",", "level", ":", "str", "=", "'RUNNING_LOW'", ")", "->", "None", ":", "_", ",", "error", "=", "self", ".", "_execute", "(", "'-s'", ",", "self", ".", "device_sn", ",", "'...	46.727273	27.272727
def pad(self, minibatch): """Pad a batch of examples using this field. Pads to self.fix_length if provided, otherwise pads to the length of the longest example in the batch. Prepends self.init_token and appends self.eos_token if those attributes are not None. Returns a tuple of the ...	[ "def", "pad", "(", "self", ",", "minibatch", ")", ":", "minibatch", "=", "list", "(", "minibatch", ")", "if", "not", "self", ".", "sequential", ":", "return", "minibatch", "if", "self", ".", "fix_length", "is", "None", ":", "max_len", "=", "max", "(", ...	49.222222	21.805556
def update(self, id_equipment, id_environment, is_router): """Remove Related Equipment with Environment from by the identifier. :param id_equipment: Identifier of the Equipment. Integer value and greater than zero. :param id_environment: Identifier of the Environment. Integer value and greater ...	[ "def", "update", "(", "self", ",", "id_equipment", ",", "id_environment", ",", "is_router", ")", ":", "if", "not", "is_valid_int_param", "(", "id_equipment", ")", ":", "raise", "InvalidParameterError", "(", "u'The identifier of Equipment is invalid or was not informed.'",...	48.176471	28.441176
def __authorize(self, client_id, client_secret, credit_card_id, **kwargs): """Call documentation: `/credit_card/authorize <https://www.wepay.com/developer/reference/credit_card#authorize>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see ...	[ "def", "__authorize", "(", "self", ",", "client_id", ",", "client_secret", ",", "credit_card_id", ",", "", "", "kwargs", ")", ":", "params", "=", "{", "'client_id'", ":", "client_id", ",", "'client_secret'", ":", "client_secret", ",", "'credit_card_id'", ":"...	37.142857	19.190476
def get_single(self, key, lang=None): """ Returns a single triple related to this node. :param key: Predicate of the triple :param lang: Language of the triple if applicable :rtype: Literal or BNode or URIRef """ if not isinstance(key, URIRef): key = URIRef(k...	[ "def", "get_single", "(", "self", ",", "key", ",", "lang", "=", "None", ")", ":", "if", "not", "isinstance", "(", "key", ",", "URIRef", ")", ":", "key", "=", "URIRef", "(", "key", ")", "if", "lang", "is", "not", "None", ":", "default", "=", "None...	32.25	13.35
def merge(self, samples_uuid): """ The method to merge the datamodels belonging to different references :param samples_uuid: The unique identifier metadata column name to identify the identical samples having different references :return: Returns the merged dataframe """ ...	[ "def", "merge", "(", "self", ",", "samples_uuid", ")", ":", "all_meta_data", "=", "pd", ".", "DataFrame", "(", ")", "for", "dm", "in", "self", ".", "data_model", ":", "all_meta_data", "=", "pd", ".", "concat", "(", "[", "all_meta_data", ",", "dm", ".",...	40.142857	23.971429
def setup(self, filters=()): """Sets up a cache of python interpreters. :param filters: A sequence of strings that constrain the interpreter compatibility for this cache, using the Requirement-style format, e.g. ``'CPython>=3', or just ['>=2.7','<3']`` for requirements agnostic to interpreter class...	[ "def", "setup", "(", "self", ",", "filters", "=", "(", ")", ")", ":", "# We filter the interpreter cache itself (and not just the interpreters we pull from it)", "# because setting up some python versions (e.g., 3<=python<3.3) crashes, and this gives us", "# an escape hatch.", "filters",...	47.027027	28.513514
def J(self, log_sigma): """Return the sensitivity matrix Parameters ---------- log_sigma : numpy.ndarray log_e conductivities """ m = 1.0 / np.exp(log_sigma) tdm = self._get_tdm(m) tdm.model( sensitivities=True, # out...	[ "def", "J", "(", "self", ",", "log_sigma", ")", ":", "m", "=", "1.0", "/", "np", ".", "exp", "(", "log_sigma", ")", "tdm", "=", "self", ".", "_get_tdm", "(", "m", ")", "tdm", ".", "model", "(", "sensitivities", "=", "True", ",", "# output_directory...	29.734694	18.693878
def seek_write(path, data, offset): ''' .. versionadded:: 2014.1.0 Seek to a position on a file and write to it path path to file data data to write to file offset position in file to start writing CLI Example: .. code-block:: bash salt '*' file.see...	[ "def", "seek_write", "(", "path", ",", "data", ",", "offset", ")", ":", "path", "=", "os", ".", "path", ".", "expanduser", "(", "path", ")", "seek_fh", "=", "os", ".", "open", "(", "path", ",", "os", ".", "O_WRONLY", ")", "try", ":", "os", ".", ...	19.433333	22.766667
def component_mget(self, zip_data, components): """Call the zip component_mget endpoint Args: - zip_data - As described in the class docstring. - components - A list of strings for each component to include in the request. Example: ["zip/details", "zip/volatility...	[ "def", "component_mget", "(", "self", ",", "zip_data", ",", "components", ")", ":", "if", "not", "isinstance", "(", "components", ",", "list", ")", ":", "print", "(", "\"Components param must be a list\"", ")", "return", "query_params", "=", "{", "\"components\"...	37.75	20.25
def MoveToAttributeNo(self, no): """Moves the position of the current instance to the attribute with the specified index relative to the containing element. """ ret = libxml2mod.xmlTextReaderMoveToAttributeNo(self._o, no) return ret	[ "def", "MoveToAttributeNo", "(", "self", ",", "no", ")", ":", "ret", "=", "libxml2mod", ".", "xmlTextReaderMoveToAttributeNo", "(", "self", ".", "_o", ",", "no", ")", "return", "ret" ]	52.4	11.6
def create(self, title, body, labels): """Create an issue in Github. For JSON data returned by Github refer: https://developer.github.com/v3/issues/#create-an-issue :param title: title of the issue :param body: body of the issue :param labels: list of labels for the issu...	[ "def", "create", "(", "self", ",", "title", ",", "body", ",", "labels", ")", ":", "url", "=", "\"https://api.github.com/repos/{}/{}/issues\"", ".", "format", "(", "self", ".", "user", ",", "self", ".", "repo", ")", "data", "=", "{", "'title'", ":", "titl...	29.777778	18.666667
def _format_numer(number_format, prefix='', suffix=''): """Format a number to a string.""" @_surpress_formatting_errors def inner(v): if isinstance(v, Number): return ("{{}}{{:{}}}{{}}" .format(number_format) .format(prefix, v, suffix)) els...	[ "def", "_format_numer", "(", "number_format", ",", "prefix", "=", "''", ",", "suffix", "=", "''", ")", ":", "@", "_surpress_formatting_errors", "def", "inner", "(", "v", ")", ":", "if", "isinstance", "(", "v", ",", "Number", ")", ":", "return", "(", "\...	34.909091	11.818182
def get_names_in_namespace_page(namespace_id, offset, count, proxy=None, hostport=None): """ Get a page of names in a namespace Returns the list of names on success Returns {'error': ...} on error """ assert proxy or hostport, 'Need proxy or hostport' if proxy is None: proxy = connec...	[ "def", "get_names_in_namespace_page", "(", "namespace_id", ",", "offset", ",", "count", ",", "proxy", "=", "None", ",", "hostport", "=", "None", ")", ":", "assert", "proxy", "or", "hostport", ",", "'Need proxy or hostport'", "if", "proxy", "is", "None", ":", ...	30.571429	22.4
def rewind(self): """ Put us back at the beginning of the file again. """ # Superclass rewind super(FileRecordStream, self).rewind() self.close() self._file = open(self._filename, self._mode) self._reader = csv.reader(self._file, dialect="excel") # Skip header rows self._reade...	[ "def", "rewind", "(", "self", ")", ":", "# Superclass rewind", "super", "(", "FileRecordStream", ",", "self", ")", ".", "rewind", "(", ")", "self", ".", "close", "(", ")", "self", ".", "_file", "=", "open", "(", "self", ".", "_filename", ",", "self", ...	21.894737	18.842105
def spawn_daemon(fork=None, pgrpfile=None, outfile='out.txt'): 'causes run to be executed in a newly spawned daemon process' global LAST_PGRP_PATH fork = fork or os.fork open(outfile, 'a').close() # TODO: configurable output file if pgrpfile and os.path.exists(pgrpfile): try: cu...	[ "def", "spawn_daemon", "(", "fork", "=", "None", ",", "pgrpfile", "=", "None", ",", "outfile", "=", "'out.txt'", ")", ":", "global", "LAST_PGRP_PATH", "fork", "=", "fork", "or", "os", ".", "fork", "open", "(", "outfile", ",", "'a'", ")", ".", "close", ...	41.346154	18.192308
def global_workflow_add_authorized_users(name_or_id, alias=None, input_params={}, always_retry=True, **kwargs): """ Invokes the /globalworkflow-xxxx/addAuthorizedUsers API method. For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Global-Workflows#API-method:-/globalworkflow-xxxx%5B/yyy...	[ "def", "global_workflow_add_authorized_users", "(", "name_or_id", ",", "alias", "=", "None", ",", "input_params", "=", "{", "}", ",", "always_retry", "=", "True", ",", "", "", "kwargs", ")", ":", "fully_qualified_version", "=", "name_or_id", "+", "(", "(", ...	68.5	46.75
def _getusers(self, ids=None, names=None, match=None): """ Return a list of users that match criteria. :kwarg ids: list of user ids to return data on :kwarg names: list of user names to return data on :kwarg match: list of patterns. Returns users whose real name or ...	[ "def", "_getusers", "(", "self", ",", "ids", "=", "None", ",", "names", "=", "None", ",", "match", "=", "None", ")", ":", "params", "=", "{", "}", "if", "ids", ":", "params", "[", "'ids'", "]", "=", "self", ".", "_listify", "(", "ids", ")", "if...	37.137931	18.172414
def get_centers(self, estimation): """Get estimation on centers Parameters ---------- estimation : 1D arrary Either prior of posterior estimation Returns ------- centers : 2D array, in shape [K, n_dim] Estimation on centers """ ...	[ "def", "get_centers", "(", "self", ",", "estimation", ")", ":", "centers", "=", "estimation", "[", "0", ":", "self", ".", "map_offset", "[", "1", "]", "]", ".", "reshape", "(", "self", ".", "K", ",", "self", ".", "n_dim", ")", "return", "centers" ]	23.222222	17.833333
def _dtype(cls, tensor: tf.Tensor) -> tf.Tensor: '''Converts `tensor` to tf.float32 datatype if needed.''' if tensor.dtype != tf.float32: tensor = tf.cast(tensor, tf.float32) return tensor	[ "def", "_dtype", "(", "cls", ",", "tensor", ":", "tf", ".", "Tensor", ")", "->", "tf", ".", "Tensor", ":", "if", "tensor", ".", "dtype", "!=", "tf", ".", "float32", ":", "tensor", "=", "tf", ".", "cast", "(", "tensor", ",", "tf", ".", "float32", ...	44	12.4
def H7(self): "Sum variance (error in Haralick's original paper here)." h6 = np.tile(self.H6(), (self.rlevels2.shape[1], 1)).transpose() return (((self.rlevels2 + 2) - h6) ** 2 * self.p_xplusy).sum(1)	[ "def", "H7", "(", "self", ")", ":", "h6", "=", "np", ".", "tile", "(", "self", ".", "H6", "(", ")", ",", "(", "self", ".", "rlevels2", ".", "shape", "[", "1", "]", ",", "1", ")", ")", ".", "transpose", "(", ")", "return", "(", "(", "(", "...	55.25	28.75
def exclude_candidates(self, candidates, reason): """ mark one or more candidates as excluded from the count candidates: list of candidate_ids to exclude reason: the reason for the exclusion """ # put some paranoia around exclusion: we want to make sure that # `c...	[ "def", "exclude_candidates", "(", "self", ",", "candidates", ",", "reason", ")", ":", "# put some paranoia around exclusion: we want to make sure that", "# `candidates` is unique, and that none of these candidates have", "# been previously excluded", "for", "candidate_id", "in", "can...	45.9375	19.5
def remote_sys_name_uneq_store(self, remote_system_name): """This function saves the system name, if different from stored. """ if remote_system_name != self.remote_system_name: self.remote_system_name = remote_system_name return True return False	[ "def", "remote_sys_name_uneq_store", "(", "self", ",", "remote_system_name", ")", ":", "if", "remote_system_name", "!=", "self", ".", "remote_system_name", ":", "self", ".", "remote_system_name", "=", "remote_system_name", "return", "True", "return", "False" ]	48.333333	14.5
def unpublish(self): """ Unpublish this item. This will set and currently published versions to the archived state and delete all currently scheduled versions. """ assert self.state == self.DRAFT with xact(): self._publish(published=False) ...	[ "def", "unpublish", "(", "self", ")", ":", "assert", "self", ".", "state", "==", "self", ".", "DRAFT", "with", "xact", "(", ")", ":", "self", ".", "_publish", "(", "published", "=", "False", ")", "# Delete all scheduled items", "klass", "=", "self", ".",...	29.941176	17.823529
def _construct_role(self, managed_policy_map): """Constructs a Lambda execution role based on this SAM function's Policies property. :returns: the generated IAM Role :rtype: model.iam.IAMRole """ execution_role = IAMRole(self.logical_id + 'Role', attributes=self.get_passthrough_...	[ "def", "_construct_role", "(", "self", ",", "managed_policy_map", ")", ":", "execution_role", "=", "IAMRole", "(", "self", ".", "logical_id", "+", "'Role'", ",", "attributes", "=", "self", ".", "get_passthrough_resource_attributes", "(", ")", ")", "execution_role"...	50.590164	30.786885
def check_for_duplicate_assignments(participant): """Check that the assignment_id of the participant is unique. If it isnt the older participants will be failed. """ participants = models.Participant.query.filter_by( assignment_id=participant.assignment_id ).all() duplicates = [ ...	[ "def", "check_for_duplicate_assignments", "(", "participant", ")", ":", "participants", "=", "models", ".", "Participant", ".", "query", ".", "filter_by", "(", "assignment_id", "=", "participant", ".", "assignment_id", ")", ".", "all", "(", ")", "duplicates", "=...	37.461538	19.923077
def ess(weights): r"""Calculate the normalized effective sample size :math:`ESS` [LC95]_ of samples with ``weights`` :math:`\omega_i`. :math:`ESS=0` is terrible and :math:`ESS=1` is perfect. .. math:: ESS = \frac{1}{1+C^2} where .. math:: C^2 = \frac{1}{N} \sum_{i=1}^N (N \...	[ "def", "ess", "(", "weights", ")", ":", "# normalize weights", "w", "=", "_np", ".", "asarray", "(", "weights", ")", "/", "_np", ".", "sum", "(", "weights", ")", "# ess", "coeff_var", "=", "_np", ".", "sum", "(", "(", "len", "(", "w", ")", "*", "...	20.548387	25.677419
def format_files(src: str, dest: str, **fmt_vars: str) -> None: """Copies all files inside src into dest while formatting the contents of the files into the output. For example, a file with the following contents: {foo} bar {baz} and the vars {'foo': 'herp', 'baz': 'derp'} will end up in the...	[ "def", "format_files", "(", "src", ":", "str", ",", "dest", ":", "str", ",", "", "", "fmt_vars", ":", "str", ")", "->", "None", ":", "assert", "os", ".", "path", ".", "exists", "(", "src", ")", "assert", "os", ".", "path", ".", "exists", "(", ...	35.2	17.166667
def xml_path_completion(xml_path): """ Takes in a local xml path and returns a full path. if @xml_path is absolute, do nothing if @xml_path is not absolute, load xml that is shipped by the package """ if xml_path.startswith("/"): full_path = xml_path else: full_path =...	[ "def", "xml_path_completion", "(", "xml_path", ")", ":", "if", "xml_path", ".", "startswith", "(", "\"/\"", ")", ":", "full_path", "=", "xml_path", "else", ":", "full_path", "=", "os", ".", "path", ".", "join", "(", "robosuite", ".", "models", ".", "asse...	34.909091	14.909091
def remove_run_script(self, script, target_name=None): """ Removes the given script string from the given target :param script: The script string to be removed from the target :param target_name: Target name or list of target names to remove the run script from or None for every target ...	[ "def", "remove_run_script", "(", "self", ",", "script", ",", "target_name", "=", "None", ")", ":", "for", "target", "in", "self", ".", "objects", ".", "get_targets", "(", "target_name", ")", ":", "for", "build_phase_id", "in", "target", ".", "buildPhases", ...	48.5	21.625
def set_state(self, updater=None, **kwargs): """Update the datastore. :param func\|dict updater: (state) => state_change or dict state_change :rtype: Iterable[tornado.concurrent.Future] """ if callable(updater): state_change = updater(self) elif updater is not...	[ "def", "set_state", "(", "self", ",", "updater", "=", "None", ",", "", "", "kwargs", ")", ":", "if", "callable", "(", "updater", ")", ":", "state_change", "=", "updater", "(", "self", ")", "elif", "updater", "is", "not", "None", ":", "state_change", ...	33.1875	13.875
def get_shell(pid=None, max_depth=6): """Get the shell that the supplied pid or os.getpid() is running in. """ pid = str(pid or os.getpid()) mapping = _get_process_mapping() for proc_cmd in _iter_process_command(mapping, pid, max_depth): if proc_cmd.startswith('-'): # Login shell! Let's u...	[ "def", "get_shell", "(", "pid", "=", "None", ",", "max_depth", "=", "6", ")", ":", "pid", "=", "str", "(", "pid", "or", "os", ".", "getpid", "(", ")", ")", "mapping", "=", "_get_process_mapping", "(", ")", "for", "proc_cmd", "in", "_iter_process_comman...	44.75	12.166667
def strip_wsgi(request): """Strip WSGI data out of the request META data.""" meta = copy(request.META) for key in meta: if key[:4] == 'wsgi': meta[key] = None return meta	[ "def", "strip_wsgi", "(", "request", ")", ":", "meta", "=", "copy", "(", "request", ".", "META", ")", "for", "key", "in", "meta", ":", "if", "key", "[", ":", "4", "]", "==", "'wsgi'", ":", "meta", "[", "key", "]", "=", "None", "return", "meta" ]	25	16.875
def itemData(self, item, column, role=Qt.DisplayRole): """ Returns the data stored under the given role for the item. O The column parameter may be used to differentiate behavior per column. The default implementation does nothing. Descendants should typically override this ...	[ "def", "itemData", "(", "self", ",", "item", ",", "column", ",", "role", "=", "Qt", ".", "DisplayRole", ")", ":", "if", "role", "==", "Qt", ".", "DecorationRole", ":", "if", "column", "==", "self", ".", "COL_DECORATION", ":", "return", "item", ".", "...	36.296296	20.925926
def tear_down(self): """Tear down the instance """ import boto.ec2 if not self.browser_config.get('terminate'): self.warning_log("Skipping terminate") return self.info_log("Tearing down...") ec2 = boto.ec2.connect_to_region(self.browser_config.g...	[ "def", "tear_down", "(", "self", ")", ":", "import", "boto", ".", "ec2", "if", "not", "self", ".", "browser_config", ".", "get", "(", "'terminate'", ")", ":", "self", ".", "warning_log", "(", "\"Skipping terminate\"", ")", "return", "self", ".", "info_log"...	29.692308	20
def create(self, dcid, vpsplanid, osid, params=None): ''' /v1/server/create POST - account Create a new virtual machine. You will start being billed for this immediately. The response only contains the SUBID for the new machine. You should use v1/server/list to poll and wait for ...	[ "def", "create", "(", "self", ",", "dcid", ",", "vpsplanid", ",", "osid", ",", "params", "=", "None", ")", ":", "params", "=", "update_params", "(", "params", ",", "{", "'DCID'", ":", "dcid", ",", "'VPSPLANID'", ":", "vpsplanid", ",", "'OSID'", ":", ...	40.4375	20.9375
def delete_enrollment_claim(self, id, **kwargs): """Delete""" api = self._get_api(enrollment.PublicAPIApi) return api.delete_device_enrollment(id=id)	[ "def", "delete_enrollment_claim", "(", "self", ",", "id", ",", "", "", "kwargs", ")", ":", "api", "=", "self", ".", "_get_api", "(", "enrollment", ".", "PublicAPIApi", ")", "return", "api", ".", "delete_device_enrollment", "(", "id", "=", "id", ")" ]	42.5	7.5
def random_box(molecules, total=None, proportions=None, size=[1.,1.,1.], maxtries=100): '''Create a System made of a series of random molecules. Parameters: total: molecules: proportions: ''' # Setup proportions to be right if proportions is None: proportions = np....	[ "def", "random_box", "(", "molecules", ",", "total", "=", "None", ",", "proportions", "=", "None", ",", "size", "=", "[", "1.", ",", "1.", ",", "1.", "]", ",", "maxtries", "=", "100", ")", ":", "# Setup proportions to be right", "if", "proportions", "is"...	33.31746	22.460317
def _hasattr(self, fieldname): """Returns True if this packet contains fieldname, False otherwise.""" special = 'history', 'raw' return (fieldname in special or fieldname in self._defn.fieldmap or fieldname in self._defn.derivationmap)	[ "def", "_hasattr", "(", "self", ",", "fieldname", ")", ":", "special", "=", "'history'", ",", "'raw'", "return", "(", "fieldname", "in", "special", "or", "fieldname", "in", "self", ".", "_defn", ".", "fieldmap", "or", "fieldname", "in", "self", ".", "_de...	47.833333	6.833333
def _list_objects(self, client_kwargs, max_request_entries): """ Lists objects. args: client_kwargs (dict): Client arguments. max_request_entries (int): If specified, maximum entries returned by request. Returns: generator of tuple: o...	[ "def", "_list_objects", "(", "self", ",", "client_kwargs", ",", "max_request_entries", ")", ":", "client_kwargs", "=", "self", ".", "_update_listing_client_kwargs", "(", "client_kwargs", ",", "max_request_entries", ")", "with", "_handle_azure_exception", "(", ")", ":"...	35.75	20.35
def deserialize(raw): """Instantiate :py:class:`ofxclient.Institution` from dictionary :param raw: serialized ``Institution`` :param type: dict per :py:method:`~Institution.serialize` :rtype: subclass of :py:class:`ofxclient.Institution` """ return Institution( ...	[ "def", "deserialize", "(", "raw", ")", ":", "return", "Institution", "(", "id", "=", "raw", "[", "'id'", "]", ",", "org", "=", "raw", "[", "'org'", "]", ",", "url", "=", "raw", "[", "'url'", "]", ",", "broker_id", "=", "raw", ".", "get", "(", "...	36.176471	13.647059

def set_who(voevent, date=None, author_ivorn=None): """Sets the minimal 'Who' attributes: date of authoring, AuthorIVORN. Args: voevent(:class:`Voevent`): Root node of a VOEvent etree. date(datetime.datetime): Date of authoring. NB Microseconds are ignored, as per the VOEvent spec....

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def with_metaclass(meta, *bases): """copied from https://github.com/Byron/bcore/blob/master/src/python/butility/future.py#L15""" class metaclass(meta): __call__ = type.__call__ __init__ = type.__init__ def __new__(cls, name, nbases, d): if nbases is None: ret...

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def draw(self, data): """Display decoded characters at the current cursor position and advances the cursor if :data:`~pyte.modes.DECAWM` is set. :param str data: text to display. .. versionchanged:: 0.5.0 Character width is taken into account. Specifically, zero-width ...

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def vcenter_connect(self): """ Attempt to connect to vCenter :return: """ try: si = SmartConnect( host=self.host, user=self.user, pwd=self.password, port=self.port) # disconnect vc ...

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def refresh_image(self): """Get the most recent camera image.""" url = str.replace(CONST.TIMELINE_IMAGES_ID_URL, '$DEVID$', self.device_id) response = self._abode.send_request("get", url) _LOGGER.debug("Get image response: %s", response.text) return se...

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def docx_text_from_xml(xml: str, config: TextProcessingConfig) -> str: """ Converts an XML tree of a DOCX file to string contents. Args: xml: raw XML text config: :class:`TextProcessingConfig` control object Returns: contents as a string """ root = ElementTree.fromstrin...

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def visit(self, node): '''The main visit function. Visits the passed-in node and calls finalize. ''' for token in self.itervisit(node): pass result = self.finalize() if result is not self: return result

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def _deep_tuple(self, x): """Converts nested `tuple`, `list`, or `dict` to nested `tuple`.""" if isinstance(x, dict): return self._deep_tuple(tuple(sorted(x.items()))) elif isinstance(x, (list, tuple)): return tuple(map(self._deep_tuple, x)) return x

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def putkeyword(self, keyword, value, makesubrecord=False): """Put the value of a column keyword. (see :func:`table.putcolkeyword`)""" return self._table.putcolkeyword(self._column, keyword, value, makesubrecord)

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def get_config(self, key_name): """ Return configuration value Args: key_name (str): configuration key Returns: The value for the specified configuration key, or if not found in the config the default value specified in the Configuration Handler ...

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def find_gui_and_backend(gui=None): """Given a gui string return the gui and mpl backend. Parameters ---------- gui : str Can be one of ('tk','gtk','wx','qt','qt4','inline'). Returns ------- A tuple of (gui, backend) where backend is one of ('TkAgg','GTKAgg', 'WXAgg','Qt4Agg','...

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def cancel(self, campaign_id): """ Cancel a Regular or Plain-Text Campaign after you send, before all of your recipients receive it. This feature is included with MailChimp Pro. :param campaign_id: The unique id for the campaign. :type campaign_id: :py:class:`str` ...

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def to_dict(self): '''Save this preceding condition into a dictionary.''' d = super(Preceding, self).to_dict() e = {} if self.timeout != 0: e['timeout'] = self.timeout if self.sending_timing: e['sendingTiming'] = self.sending_timing pcs = [] ...

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33.333333

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def diet_expert(x, hidden_size, params): """A two-layer feed-forward network with relu activation on hidden layer. Uses diet variables. Recomputes hidden layer on backprop to save activation memory. Args: x: a Tensor with shape [batch, io_size] hidden_size: an integer params: a diet variable HPara...

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def _handle_root(): """Handles index.html requests.""" res_filename = os.path.join( os.path.dirname(__file__), _PROFILE_HTML) with io.open(res_filename, 'rb') as res_file: content = res_file.read() return content, 'text/html'

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def set_color_in_grid(self, color_in_grid): """Set the pixel at the position of the :paramref:`color_in_grid` to its color. :param color_in_grid: must have the following attributes: - ``color`` is the :ref:`color <png-color>` to set the pixel to - ``x`` is the x position of...

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async def set_max_relative_mod(self, max_mod, timeout=OTGW_DEFAULT_TIMEOUT): """ Override the maximum relative modulation from the thermostat. Valid values are 0 through 100. Clear the setting by specifying a non-numeric value. Return the newly ...

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def install_caller_instruction(self, token_type="Unrestricted", transaction_id=None): """ Set us up as a caller This will install a new caller_token into the FPS section. This should really only be called to regenerate the caller token. """ ...

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def OnViewFrozen(self, event): """Show cells as frozen status""" self.grid._view_frozen = not self.grid._view_frozen self.grid.grid_renderer.cell_cache.clear() self.grid.ForceRefresh() event.Skip()

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25.777778

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def smiles_to_compound(smiles, assign_descriptors=True): """Convert SMILES text to compound object Raises: ValueError: SMILES with unsupported format """ it = iter(smiles) mol = molecule() try: for token in it: mol(token) result, _ = mol(None) except ...

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def write_switch(self, module_address, state, callback_fn): """Set relay state.""" _LOGGER.info("write_switch: setstate,{},{}{}" .format(module_address, str(state), chr(13))) self.subscribe("state," + module_address, callback_fn) self.send("setstate,{},{}{}" ...

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def xmlobject_to_dict(instance, fields=None, exclude=None, prefix=''): """ Generate a dictionary based on the data in an XmlObject instance to pass as a Form's ``initial`` keyword argument. :param instance: instance of :class:`~eulxml.xmlmap.XmlObject` :param fields: optional list of fields - if sp...

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40.263158

20.263158

def write_outro (self): """Write outro comments.""" self.stoptime = time.time() duration = self.stoptime - self.starttime self.comment(_("Stopped checking at %(time)s (%(duration)s)") % {"time": strformat.strtime(self.stoptime), "duration": strformat.strduratio...

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def create_volume(self, volume_name: str, driver_spec: str = None): """Create new docker volumes. Only the manager nodes can create a volume Args: volume_name (string): Name for the new docker volume driver_spec (string): Driver for the docker volume """ ...

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32.904762

20.904762

def model_eval(sess, x, y, predictions, X_test=None, Y_test=None, feed=None, args=None): """ Compute the accuracy of a TF model on some data :param sess: TF session to use :param x: input placeholder :param y: output placeholder (for labels) :param predictions: model output predictions :par...

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def initialize_worker(self, process_num=None): """ reinitialize consumer for process in multiprocesing """ self.initialize(self.grid, self.num_of_paths, self.seed)

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def add_alias(self, entry): """ Adds id to the current list 'aliased_by' """ assert isinstance(entry, SymbolVAR) self.aliased_by.append(entry)

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34

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def group_id(self): """ Returns the @GROUPID. If derived_from is set, returns that group_id. """ if self.derived_from is not None: return self.derived_from.group_id() if self.file_uuid is None: return None return utils.GROUP_ID_PREFIX + se...

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def getLeastUsedCell(self, c): """For the least used cell in a column""" segmentsPerCell = numpy.zeros(self.cellsPerColumn, dtype='uint32') for i in range(self.cellsPerColumn): segmentsPerCell[i] = self.getNumSegmentsInCell(c,i) cellMinUsage = numpy.where(segmentsPerCell==segmentsPerCell.min())[0...

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46.416667

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def delete_free_shipping_promotion_by_id(cls, free_shipping_promotion_id, **kwargs): """Delete FreeShippingPromotion Delete an instance of FreeShippingPromotion by its ID. This method makes a synchronous HTTP request by default. To make an asynchronous HTTP request, please pass async=Tr...

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def make_ring_dict(self, galkey): """ Make a dictionary mapping the merged component names to list of template files Parameters ---------- galkey : str Unique key for this ring dictionary Returns `model_component.GalpropMergedRingInfo` """ galprop_r...

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def compile(self): """ Build the abstract Parsley tree starting from the root node (recursive) """ if not isinstance(self.parselet, dict): raise ValueError("Parselet must be a dict of some sort. Or use .from_jsonstring(), " \ ".from_jsonfile(), .from_y...

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def hume_process_jsonld(): """Process Hume JSON-LD and return INDRA Statements.""" if request.method == 'OPTIONS': return {} response = request.body.read().decode('utf-8') body = json.loads(response) jsonld_str = body.get('jsonld') jsonld = json.loads(jsonld_str) hp = hume.process_js...

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35.5

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def permissions_for(self, member): """Handles permission resolution for the current :class:`Member`. This function takes into consideration the following cases: - Guild owner - Guild roles - Channel overrides - Member overrides Parameters ---------- ...

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def rmse(self): """Get RMSE for regression model evaluation results. Returns: the RMSE float number. Raises: Exception if the CSV headers do not include 'target' or 'predicted', or BigQuery does not return 'target' or 'predicted' column, or if target or predicted is not number. ...

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33.483871

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def user_with_name(self, given_name=None, sn=None): """Get a unique user object by given name (first/nickname and last).""" results = [] if sn and not given_name: results = User.objects.filter(last_name=sn) elif given_name: query = {'first_name': given_name} ...

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def register_alias(self, alias, key): """Aliases provide another accessor for the same key. This enables one to change a name without breaking the application. """ alias = alias.lower() key = key.lower() if alias != key and alias != self._real_key(key): exists...

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def as_dict(self): """ Serializes the object necessary data in a dictionary. :returns: Serialized data in a dictionary. :rtype: dict """ result_dict = super(Profile, self).as_dict() statuses = list() version = None titles = list() descri...

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31.888889

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def _set_field(self, fieldname, bytestring, transfunc=None): """convienience function to set fields of the tinytag by name. the payload (bytestring) can be changed using the transfunc""" if getattr(self, fieldname): # do not overwrite existing data return value = bytestring ...

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51.1

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def update_parent_sequence_map(child_part, delete=False): """Updates the child map of a simple sequence assessment assessment part""" if child_part.has_parent_part(): object_map = child_part.get_assessment_part()._my_map database = 'assessment_authoring' collection_type = 'AssessmentPart...

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46.2

11.85

def file_handler(self, handler_type, path, prefixed_path, source_storage): """ Create a dict with all kwargs of the `copy_file` or `link_file` method of the super class and add it to the queue for later processing. """ if self.faster: if prefixed_path not in self.foun...

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41.571429

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def count_het(self, allele=None, axis=None): """Count heterozygous genotypes. Parameters ---------- allele : int, optional Allele index. axis : int, optional Axis over which to count, or None to perform overall count. """ b = self.is_het(...

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27.538462

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def get_all(self, collection_name, since=None): """ method returns all job records from a particular collection that are older than <since> """ if since is None: query = {} else: query = {job.TIMEPERIOD: {'$gte': since}} collection = self.ds.connection(collection_...

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47.5

20.583333

def create_choice(choice_list, help_string=NO_HELP, default=NO_DEFAULT): # type: (List[str], str, Union[Any, NO_DEFAULT_TYPE]) -> str """ Create a choice config :param choice_list: :param help_string: :param default: :return: """ # noinspection PyT...

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def create_parser(subparsers): ''' :param subparsers: :return: ''' parser = subparsers.add_parser( 'restart', help='Restart a topology', usage="%(prog)s [options] cluster/[role]/[env] <topology-name> [container-id]", add_help=True) args.add_titles(parser) args.add_cluster_role_env...

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22.5

22.142857

def compile_patterns_in_dictionary(dictionary): """ Replace all strings in dictionary with compiled version of themselves and return dictionary. """ for key, value in dictionary.items(): if isinstance(value, str): dictionary[key] = re.compile(value) elif isinstance(value,...

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35.363636

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def add_grid(self): """Add axis and ticks to figure. Notes ----- I know that visvis and pyqtgraphs can do this in much simpler way, but those packages create too large a padding around the figure and this is pretty fast. """ value = self.config.value ...

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43.25

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def terminate(self, sigkill=False): """ Terminate (and then kill) the process launched to process the file. :param sigkill: whether to issue a SIGKILL if SIGTERM doesn't work. :type sigkill: bool """ if self._process is None: raise AirflowException("Tried to ...

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42.588235

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def time_boxed(func, iterable, time_budget, *args): """ Apply a function to the items of an iterable within a given time budget. Loop the given iterable, calling the given function on each item. The expended time is compared to the given time budget after each iteration. """ time_budget = time_...

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36

21.777778

def detect_and_decorate(decorator, args, kwargs): """ Helper for applying a decorator when it is applied directly, and also applying it when it is given arguments and then applied to a function. """ # special behavior when invoked with only one non-keyword argument: act as # a normal decorator, ...

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40.148148

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def try_except_handler(self, node): """Handler for try except statement to ignore excepted exceptions.""" # List all excepted exception's names excepted_types = [] for handler in node.handlers: if handler.type is None: excepted_types = None bre...

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38

18.970588

def seed_response(self, command, response): # type: (Text, dict) -> MockAdapter """ Sets the response that the adapter will return for the specified command. You can seed multiple responses per command; the adapter will put them into a FIFO queue. When a request comes i...

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32.571429

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def set_stack(self, stack_dump, stack_top): """ Stack dump is a dump of the stack from gdb, i.e. the result of the following gdb command : ``dump binary memory [stack_dump] [begin_addr] [end_addr]`` We set the stack to the same addresses as the gdb session to avoid pointers corruption....

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46.235294

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def _authenticate(secrets_file): """Runs the OAuth 2.0 installed application flow. Returns: An authorized httplib2.Http instance. """ flow = oauthclient.flow_from_clientsecrets( secrets_file, scope=OAUTH_SCOPE, message=('Failed to initialized OAuth 2.0 flow with secrets ' ...

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38.352941

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def patch_data(data, L=100, try_diag=True, verbose=False): '''Patch ``data`` (for example Markov chain output) into parts of length ``L``. Return a Gaussian mixture where each component gets the empirical mean and covariance of one patch. :param data: Matrix-like array; the points to be patche...

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36.910448

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def build_trading_timeline(start, end): ''' Build the daily-based index we will trade on ''' EMPTY_DATES = pd.date_range('2000/01/01', periods=0, tz=pytz.utc) now = dt.datetime.now(tz=pytz.utc) if not start: if not end: # Live trading until the end of the day bt_dates = ...

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39.096774

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def find_urls(thing, base_url=None, mimetype=None, log=False): """ This function uses several methods to extract URLs from 'thing', which can be a string or raw bytes. If you supply the base URL, it will attempt to use it with urljoin to create full URLs from relative paths. """ if log: logging...

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38.128342

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def change_keyboard_control(self, onerror = None, **keys): """Change the parameters provided as keyword arguments: key_click_percent The volume of key clicks between 0 (off) and 100 (load). -1 will restore default setting. bell_percent The base volume of the ...

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42.551724

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def cli(env): """List object storage accounts.""" mgr = SoftLayer.ObjectStorageManager(env.client) accounts = mgr.list_accounts() table = formatting.Table(['id', 'name', 'apiType']) table.sortby = 'id' api_type = None for account in accounts: if 'vendorName' in account and account['...

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27.952381

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46.727273

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def pad(self, minibatch): """Pad a batch of examples using this field. Pads to self.fix_length if provided, otherwise pads to the length of the longest example in the batch. Prepends self.init_token and appends self.eos_token if those attributes are not None. Returns a tuple of the ...

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49.222222

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def update(self, id_equipment, id_environment, is_router): """Remove Related Equipment with Environment from by the identifier. :param id_equipment: Identifier of the Equipment. Integer value and greater than zero. :param id_environment: Identifier of the Environment. Integer value and greater ...

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48.176471

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def __authorize(self, client_id, client_secret, credit_card_id, **kwargs): """Call documentation: `/credit_card/authorize <https://www.wepay.com/developer/reference/credit_card#authorize>`_, plus extra keyword parameter: :keyword bool batch_mode: turn on/off the batch_mode, see ...

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37.142857

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def get_single(self, key, lang=None): """ Returns a single triple related to this node. :param key: Predicate of the triple :param lang: Language of the triple if applicable :rtype: Literal or BNode or URIRef """ if not isinstance(key, URIRef): key = URIRef(k...

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32.25

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def merge(self, samples_uuid): """ The method to merge the datamodels belonging to different references :param samples_uuid: The unique identifier metadata column name to identify the identical samples having different references :return: Returns the merged dataframe """ ...

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40.142857

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def setup(self, filters=()): """Sets up a cache of python interpreters. :param filters: A sequence of strings that constrain the interpreter compatibility for this cache, using the Requirement-style format, e.g. ``'CPython>=3', or just ['>=2.7','<3']`` for requirements agnostic to interpreter class...

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47.027027

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def J(self, log_sigma): """Return the sensitivity matrix Parameters ---------- log_sigma : numpy.ndarray log_e conductivities """ m = 1.0 / np.exp(log_sigma) tdm = self._get_tdm(m) tdm.model( sensitivities=True, # out...

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29.734694

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def seek_write(path, data, offset): ''' .. versionadded:: 2014.1.0 Seek to a position on a file and write to it path path to file data data to write to file offset position in file to start writing CLI Example: .. code-block:: bash salt '*' file.see...

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19.433333

22.766667

def component_mget(self, zip_data, components): """Call the zip component_mget endpoint Args: - zip_data - As described in the class docstring. - components - A list of strings for each component to include in the request. Example: ["zip/details", "zip/volatility...

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37.75

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def MoveToAttributeNo(self, no): """Moves the position of the current instance to the attribute with the specified index relative to the containing element. """ ret = libxml2mod.xmlTextReaderMoveToAttributeNo(self._o, no) return ret

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52.4

11.6

def create(self, title, body, labels): """Create an issue in Github. For JSON data returned by Github refer: https://developer.github.com/v3/issues/#create-an-issue :param title: title of the issue :param body: body of the issue :param labels: list of labels for the issu...

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29.777778

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def _format_numer(number_format, prefix='', suffix=''): """Format a number to a string.""" @_surpress_formatting_errors def inner(v): if isinstance(v, Number): return ("{{}}{{:{}}}{{}}" .format(number_format) .format(prefix, v, suffix)) els...

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34.909091

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def get_names_in_namespace_page(namespace_id, offset, count, proxy=None, hostport=None): """ Get a page of names in a namespace Returns the list of names on success Returns {'error': ...} on error """ assert proxy or hostport, 'Need proxy or hostport' if proxy is None: proxy = connec...

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def rewind(self): """ Put us back at the beginning of the file again. """ # Superclass rewind super(FileRecordStream, self).rewind() self.close() self._file = open(self._filename, self._mode) self._reader = csv.reader(self._file, dialect="excel") # Skip header rows self._reade...

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def spawn_daemon(fork=None, pgrpfile=None, outfile='out.txt'): 'causes run to be executed in a newly spawned daemon process' global LAST_PGRP_PATH fork = fork or os.fork open(outfile, 'a').close() # TODO: configurable output file if pgrpfile and os.path.exists(pgrpfile): try: cu...

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def global_workflow_add_authorized_users(name_or_id, alias=None, input_params={}, always_retry=True, **kwargs): """ Invokes the /globalworkflow-xxxx/addAuthorizedUsers API method. For more info, see: https://wiki.dnanexus.com/API-Specification-v1.0.0/Global-Workflows#API-method:-/globalworkflow-xxxx%5B/yyy...

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def _getusers(self, ids=None, names=None, match=None): """ Return a list of users that match criteria. :kwarg ids: list of user ids to return data on :kwarg names: list of user names to return data on :kwarg match: list of patterns. Returns users whose real name or ...

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def get_centers(self, estimation): """Get estimation on centers Parameters ---------- estimation : 1D arrary Either prior of posterior estimation Returns ------- centers : 2D array, in shape [K, n_dim] Estimation on centers """ ...

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def _dtype(cls, tensor: tf.Tensor) -> tf.Tensor: '''Converts `tensor` to tf.float32 datatype if needed.''' if tensor.dtype != tf.float32: tensor = tf.cast(tensor, tf.float32) return tensor

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def H7(self): "Sum variance (error in Haralick's original paper here)." h6 = np.tile(self.H6(), (self.rlevels2.shape[1], 1)).transpose() return (((self.rlevels2 + 2) - h6) ** 2 * self.p_xplusy).sum(1)

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def exclude_candidates(self, candidates, reason): """ mark one or more candidates as excluded from the count candidates: list of candidate_ids to exclude reason: the reason for the exclusion """ # put some paranoia around exclusion: we want to make sure that # `c...

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def remote_sys_name_uneq_store(self, remote_system_name): """This function saves the system name, if different from stored. """ if remote_system_name != self.remote_system_name: self.remote_system_name = remote_system_name return True return False

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def unpublish(self): """ Unpublish this item. This will set and currently published versions to the archived state and delete all currently scheduled versions. """ assert self.state == self.DRAFT with xact(): self._publish(published=False) ...

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def _construct_role(self, managed_policy_map): """Constructs a Lambda execution role based on this SAM function's Policies property. :returns: the generated IAM Role :rtype: model.iam.IAMRole """ execution_role = IAMRole(self.logical_id + 'Role', attributes=self.get_passthrough_...

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def check_for_duplicate_assignments(participant): """Check that the assignment_id of the participant is unique. If it isnt the older participants will be failed. """ participants = models.Participant.query.filter_by( assignment_id=participant.assignment_id ).all() duplicates = [ ...

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def ess(weights): r"""Calculate the normalized effective sample size :math:`ESS` [LC95]_ of samples with ``weights`` :math:`\omega_i`. :math:`ESS=0` is terrible and :math:`ESS=1` is perfect. .. math:: ESS = \frac{1}{1+C^2} where .. math:: C^2 = \frac{1}{N} \sum_{i=1}^N (N \...

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def format_files(src: str, dest: str, **fmt_vars: str) -> None: """Copies all files inside src into dest while formatting the contents of the files into the output. For example, a file with the following contents: {foo} bar {baz} and the vars {'foo': 'herp', 'baz': 'derp'} will end up in the...

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def xml_path_completion(xml_path): """ Takes in a local xml path and returns a full path. if @xml_path is absolute, do nothing if @xml_path is not absolute, load xml that is shipped by the package """ if xml_path.startswith("/"): full_path = xml_path else: full_path =...

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def remove_run_script(self, script, target_name=None): """ Removes the given script string from the given target :param script: The script string to be removed from the target :param target_name: Target name or list of target names to remove the run script from or None for every target ...

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48.5

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def set_state(self, updater=None, **kwargs): """Update the datastore. :param func|dict updater: (state) => state_change or dict state_change :rtype: Iterable[tornado.concurrent.Future] """ if callable(updater): state_change = updater(self) elif updater is not...

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33.1875

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def get_shell(pid=None, max_depth=6): """Get the shell that the supplied pid or os.getpid() is running in. """ pid = str(pid or os.getpid()) mapping = _get_process_mapping() for proc_cmd in _iter_process_command(mapping, pid, max_depth): if proc_cmd.startswith('-'): # Login shell! Let's u...

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def strip_wsgi(request): """Strip WSGI data out of the request META data.""" meta = copy(request.META) for key in meta: if key[:4] == 'wsgi': meta[key] = None return meta

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def itemData(self, item, column, role=Qt.DisplayRole): """ Returns the data stored under the given role for the item. O The column parameter may be used to differentiate behavior per column. The default implementation does nothing. Descendants should typically override this ...

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def tear_down(self): """Tear down the instance """ import boto.ec2 if not self.browser_config.get('terminate'): self.warning_log("Skipping terminate") return self.info_log("Tearing down...") ec2 = boto.ec2.connect_to_region(self.browser_config.g...

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def create(self, dcid, vpsplanid, osid, params=None): ''' /v1/server/create POST - account Create a new virtual machine. You will start being billed for this immediately. The response only contains the SUBID for the new machine. You should use v1/server/list to poll and wait for ...

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def delete_enrollment_claim(self, id, **kwargs): """Delete""" api = self._get_api(enrollment.PublicAPIApi) return api.delete_device_enrollment(id=id)

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def random_box(molecules, total=None, proportions=None, size=[1.,1.,1.], maxtries=100): '''Create a System made of a series of random molecules. Parameters: total: molecules: proportions: ''' # Setup proportions to be right if proportions is None: proportions = np....

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def _hasattr(self, fieldname): """Returns True if this packet contains fieldname, False otherwise.""" special = 'history', 'raw' return (fieldname in special or fieldname in self._defn.fieldmap or fieldname in self._defn.derivationmap)

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def _list_objects(self, client_kwargs, max_request_entries): """ Lists objects. args: client_kwargs (dict): Client arguments. max_request_entries (int): If specified, maximum entries returned by request. Returns: generator of tuple: o...

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def deserialize(raw): """Instantiate :py:class:`ofxclient.Institution` from dictionary :param raw: serialized ``Institution`` :param type: dict per :py:method:`~Institution.serialize` :rtype: subclass of :py:class:`ofxclient.Institution` """ return Institution( ...

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36.176471

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